AlfalfaGEDB | Msa0623860

M. sativa cultivar zhongmu-4 / Msa0623860

KEGG: K09564
GO: GO:0000375 GO:0000377 GO:0000398 GO:0000413 GO:0001775 GO:0002252 GO:0002263 GO:0002274 GO:0002275 GO:0002283 GO:0002366 GO:0002376 GO:0002443 GO:0002444 GO:0002446 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0003729 GO:0003755 GO:0003824 GO:0005488 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006281 GO:0006283 GO:0006289 GO:0006355 GO:0006396 GO:0006397 GO:0006464 GO:0006725 GO:0006807 GO:0006810 GO:0006887 GO:0006950 GO:0006955 GO:0006974 GO:0008143 GO:0008144 GO:0008150 GO:0008152 GO:0008380 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0012505 GO:0016018 GO:0016070 GO:0016071 GO:0016192 GO:0016604 GO:0016607 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019219 GO:0019222 GO:0019538 GO:0030141 GO:0031323 GO:0031326 GO:0031410 GO:0031974 GO:0031981 GO:0031982 GO:0031983 GO:0032940 GO:0032991 GO:0033218 GO:0033554 GO:0034641 GO:0034774 GO:0036211 GO:0036230 GO:0042119 GO:0042277 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043299 GO:0043312 GO:0043412 GO:0043900 GO:0043902 GO:0043903 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044433 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0045069 GO:0045070 GO:0045321 GO:0046483 GO:0046903 GO:0048518 GO:0048524 GO:0050789 GO:0050792 GO:0050794 GO:0050896 GO:0051171 GO:0051179 GO:0051234 GO:0051252 GO:0051716 GO:0060205 GO:0060255 GO:0065007 GO:0070013 GO:0070717 GO:0071007 GO:0071013 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097708 GO:0099503 GO:0101002 GO:0140096 GO:1901360 GO:1901363 GO:1901564 GO:1902494 GO:1903506 GO:1903900 GO:1903902 GO:1904813 GO:1990904 GO:2000112 GO:2001141
PFAM: PF00076.25

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0623860	XP_003614112.1	100.000	164	0	0	1	164	1	164	4.56e-116	335

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0623860	sp\|Q5R723\|PPIE_PONAB	55.238	105	42	2	9	113	5	104	2.77e-33	122

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0623860	A0A2Z6P753	100.000	164	0	0	1	164	1	164	2.18e-116	335

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0023000	Msa0623860	0.812724	3.670096e-51	-8.615850e-47
Msa0027260	Msa0623860	0.829033	6.454687e-55	-8.615850e-47
Msa0118780	Msa0623860	0.812558	3.990234e-51	-8.615850e-47
Msa0623860	Msa0626030	0.829609	4.676898e-55	-8.615850e-47
Msa0623860	Msa0650190	0.850186	1.998544e-60	-8.615850e-47
Msa0623860	Msa0670270	0.803658	3.139041e-49	-8.615850e-47
Msa0623860	Msa0681800	0.817961	2.513781e-52	-8.615850e-47
Msa0623860	Msa0722020	0.836217	1.065148e-56	-8.615850e-47
Msa0623860	Msa0755340	0.813245	2.821679e-51	-8.615850e-47
Msa0623860	Msa0763020	0.822096	2.844034e-53	-8.615850e-47
Msa0623860	Msa0763070	0.812014	5.245156e-51	-8.615850e-47
Msa0623860	Msa0769980	0.821738	3.441461e-53	-8.615850e-47
Msa0623860	Msa0805500	0.801197	1.008804e-48	-8.615850e-47
Msa0623860	Msa0835280	0.810122	1.348613e-50	-8.615850e-47
Msa0623860	Msa0900630	0.825501	4.528956e-54	-8.615850e-47
Msa0623860	Msa0926460	0.831931	1.261648e-55	-8.615850e-47
Msa0623860	Msa0965860	0.825775	3.900936e-54	-8.615850e-47
Msa0623860	Msa0974810	0.824300	8.698590e-54	-8.615850e-47
Msa0623860	Msa0999050	-0.806901	6.566544e-50	-8.615850e-47
Msa0623860	Msa1000690	0.804131	2.502505e-49	-8.615850e-47
Msa0623860	Msa1060220	0.810452	1.144824e-50	-8.615850e-47
Msa0623860	Msa1175330	0.806326	8.686398e-50	-8.615850e-47
Msa0623860	Msa1204250	0.819966	8.798637e-53	-8.615850e-47
Msa0623860	Msa1296830	0.804144	2.486839e-49	-8.615850e-47
Msa0623860	Msa1333110	0.822327	2.513750e-53	-8.615850e-47
Msa0623860	Msa1345220	0.809796	1.585257e-50	-8.615850e-47
Msa0623860	Msa1348950	0.809944	1.473071e-50	-8.615850e-47
Msa0623860	Msa1376650	0.804148	2.482330e-49	-8.615850e-47
Msa0623860	Msa1403800	0.817645	2.962393e-52	-8.615850e-47
Msa0623860	Msa1451550	0.807374	5.214529e-50	-8.615850e-47
Msa0137820	Msa0623860	0.806076	9.804614e-50	-8.615850e-47
Msa0162130	Msa0623860	0.804343	2.261140e-49	-8.615850e-47
Msa0194480	Msa0623860	0.833938	4.000004e-56	-8.615850e-47
Msa0199690	Msa0623860	0.802030	6.806369e-49	-8.615850e-47
Msa0199880	Msa0623860	0.800894	1.163322e-48	-8.615850e-47
Msa0236980	Msa0623860	0.808999	2.349479e-50	-8.615850e-47
Msa0398950	Msa0623860	0.812308	4.525384e-51	-8.615850e-47
Msa0405370	Msa0623860	0.805907	1.064307e-49	-8.615850e-47
Msa0241800	Msa0623860	0.813267	2.790797e-51	-8.615850e-47
Msa0242230	Msa0623860	0.806208	9.197006e-50	-8.615850e-47
Msa0261550	Msa0623860	0.802366	5.805191e-49	-8.615850e-47
Msa0488270	Msa0623860	0.802928	4.443865e-49	-8.615850e-47
Msa0508590	Msa0623860	0.801509	8.708320e-49	-8.615850e-47
Msa0520790	Msa0623860	0.805822	1.108706e-49	-8.615850e-47
Msa0534900	Msa0623860	0.804257	2.355979e-49	-8.615850e-47
Msa0557480	Msa0623860	0.827450	1.554379e-54	-8.615850e-47
Msa0591060	Msa0623860	0.815404	9.404571e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0623860	MtrunA17_Chr5g0419351	100.000	164	0	0	1	164	1	164	4.19e-120	335
Msa0623860	MtrunA17_Chr3g0119311	45.238	84	45	1	10	93	36	118	5.06e-16	70.5
Msa0623860	MtrunA17_Chr7g0219021	44.000	75	42	0	12	86	42	116	2.26e-15	71.2
Msa0623860	MtrunA17_Chr4g0061451	36.905	84	53	0	3	86	35	118	3.96e-14	67.8
Msa0623860	MtrunA17_Chr3g0121631	34.884	86	55	1	1	86	27	111	1.72e-13	63.9
Msa0623860	MtrunA17_Chr1g0210241	37.647	85	53	0	4	88	1	85	5.31e-13	65.1
Msa0623860	MtrunA17_Chr4g0035031	42.667	75	43	0	12	86	10	84	2.20e-12	62.0
Msa0623860	MtrunA17_Chr7g0266751	37.179	78	49	0	12	89	34	111	1.27e-11	58.9
Msa0623860	MtrunA17_Chr3g0086861	38.667	75	46	0	12	86	46	120	2.21e-11	60.8
Msa0623860	MtrunA17_Chr4g0035001	41.333	75	44	0	12	86	8	82	2.82e-11	58.5
Msa0623860	MtrunA17_Chr4g0050781	36.709	79	50	0	12	90	9	87	2.93e-11	59.3
Msa0623860	MtrunA17_Chr4g0035051	40.000	75	45	0	12	86	10	84	3.48e-11	57.4
Msa0623860	MtrunA17_Chr8g0393061	37.975	79	49	0	10	88	211	289	5.16e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0623860	AT1G13690.1	85.350	157	22	1	9	164	12	168	1.76e-97	279
Msa0623860	AT5G61030.2	45.333	75	41	0	12	86	42	116	9.69e-17	75.9
Msa0623860	AT5G61030.1	45.333	75	41	0	12	86	42	116	9.69e-17	75.9
Msa0623860	AT3G08000.1	43.373	83	46	1	12	94	43	124	1.18e-16	72.8
Msa0623860	AT4G39260.3	42.529	87	48	1	12	98	8	92	6.61e-15	66.6
Msa0623860	AT4G13850.4	44.000	75	42	0	12	86	37	111	1.54e-13	64.3
Msa0623860	AT4G13850.3	44.000	75	42	0	12	86	37	111	1.64e-13	64.3
Msa0623860	AT4G39260.2	44.000	75	42	0	12	86	8	82	1.86e-13	63.9
Msa0623860	AT4G13850.2	44.000	75	42	0	12	86	37	111	1.97e-13	64.3
Msa0623860	AT4G13850.1	44.000	75	42	0	12	86	37	111	2.18e-13	64.3
Msa0623860	AT1G74230.1	38.636	88	50	2	2	86	23	109	4.44e-13	65.5
Msa0623860	AT4G39260.1	44.000	75	42	0	12	86	8	82	4.48e-13	63.9
Msa0623860	AT3G23830.2	41.333	75	44	0	12	86	37	111	1.27e-12	62.0
Msa0623860	AT3G23830.1	41.333	75	44	0	12	86	37	111	1.27e-12	62.0
Msa0623860	AT2G21660.2	39.286	84	51	0	3	86	1	84	2.89e-12	61.6
Msa0623860	AT5G04280.1	37.209	86	54	0	4	89	1	86	3.65e-12	63.2
Msa0623860	AT2G21660.1	39.286	84	51	0	3	86	1	84	3.91e-12	61.6
Msa0623860	AT4G13860.1	38.889	72	44	0	12	83	5	76	1.59e-11	57.8
Msa0623860	AT1G60650.2	35.714	84	54	0	6	89	8	91	5.05e-11	60.1
Msa0623860	AT1G60650.1	35.714	84	54	0	6	89	8	91	5.05e-11	60.1
Msa0623860	AT5G06210.1	32.184	87	59	0	12	98	36	122	9.92e-11	57.0

Find 53 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATAAATATATTCATATTATT+TGG	0.182401	4_3:-1308658	None:intergenic
TGCTCTTCCTGAAAAGATTA+AGG	0.186812	4_3:+1309133	Msa0623860:CDS
TTTCAAACAAGAACATTAAA+AGG	0.254081	4_3:+1308770	Msa0623860:five_prime_UTR
TTTCAGTTCAGTTAAGAGTT+AGG	0.312328	4_3:-1308850	None:intergenic
ACGCAGAAGCATCGTTCTTT+CGG	0.352412	4_3:+1309017	Msa0623860:CDS
TTCCGCCGCCATGGATAATA+TGG	0.365330	4_3:+1309070	Msa0623860:CDS
TTTCTCTCCTTCTCGCTCTT+CGG	0.386519	4_3:-1310933	None:intergenic
GAAAGAAGAAATTGAGATCA+AGG	0.390755	4_3:+1310952	Msa0623860:CDS
TTCAGTTCAGTTAAGAGTTA+GGG	0.408598	4_3:-1308849	None:intergenic
CGGAAGCATCTTCCCTTTCA+AGG	0.410203	4_3:-1309052	None:intergenic
GCTCTTCCTGAAAAGATTAA+GGG	0.410601	4_3:+1309134	Msa0623860:CDS
TTTGGGCGGATGCGGATACT+TGG	0.419214	4_3:+1310813	Msa0623860:CDS
AAAATAAAATAAAAGAAAGT+TGG	0.423271	4_3:+1308812	Msa0623860:five_prime_UTR
CAGCTTTATTCTCTGCTTCG+AGG	0.427794	4_3:-1310871	None:intergenic
CGTCGGTGGTTTAGCGGAAG+AGG	0.445488	4_3:+1308917	Msa0623860:CDS
AACGATGCTTCTGCGTTGCT+TGG	0.446571	4_3:-1309010	None:intergenic
GCTTCGTCACTTTCCTTGAA+AGG	0.458125	4_3:+1309039	Msa0623860:CDS
CTTCGTCACTTTCCTTGAAA+GGG	0.466861	4_3:+1309040	Msa0623860:CDS
AGAGAATAAAGCTGCTATGC+TGG	0.469940	4_3:+1310880	Msa0623860:CDS
CACGCGGCGTTCATACCCTT+CGG	0.482040	4_3:+1308957	Msa0623860:CDS
TCTCTACGTCGGTGGTTTAG+CGG	0.487229	4_3:+1308911	Msa0623860:CDS
AAGATTAAGGGTGGTGAACA+AGG	0.491175	4_3:+1309146	Msa0623860:CDS
TGAGATCAAGGATGATCCTA+TGG	0.496265	4_3:+1310964	Msa0623860:CDS
ATGGATGGTGCTGAACTCTA+TGG	0.504782	4_3:+1309089	Msa0623860:CDS
CACATCTTTGATATCTCCGA+AGG	0.518345	4_3:-1308973	None:intergenic
TTCTGCGTTGCTTGGTCAAG+CGG	0.538224	4_3:-1309002	None:intergenic
CAACAATGGCGATGATGCAA+GGG	0.542406	4_3:+1308874	Msa0623860:exon
TTAAGGGTGGTGAACAAGGA+TGG	0.543887	4_3:+1309150	Msa0623860:CDS
GGAAGATGCTTCCGCCGCCA+TGG	0.549924	4_3:+1309061	Msa0623860:CDS
GCAACAATGGCGATGATGCA+AGG	0.550286	4_3:+1308873	Msa0623860:exon
ATCCATATTATCCATGGCGG+CGG	0.566198	4_3:-1309072	None:intergenic
TAAGGGTGGTGAACAAGGAT+GGG	0.577061	4_3:+1309151	Msa0623860:CDS
AGCACCATCCATATTATCCA+TGG	0.577845	4_3:-1309078	None:intergenic
AGGGTATGAACGCCGCGTGA+AGG	0.578411	4_3:-1308953	None:intergenic
CAAGTAGCCGAAGAGCGAGA+AGG	0.588292	4_3:+1310926	Msa0623860:CDS
GGTATGTGAGCAATTGAAGT+GGG	0.593620	4_3:+1308733	Msa0623860:five_prime_UTR
GCCGCCATGGATAATATGGA+TGG	0.598509	4_3:+1309074	Msa0623860:CDS
TGGCTGCTGAAGAACTGCAC+AGG	0.598798	4_3:+1310900	Msa0623860:CDS
GTTTGAGCGGCAGCAACAAG+AGG	0.600650	4_3:+1310835	Msa0623860:CDS
CAAGGATGATCCTATGGCAA+GGG	0.606202	4_3:+1310970	Msa0623860:CDS
AACTGAACTGAAAGCAACAA+TGG	0.607905	4_3:+1308860	Msa0623860:exon
TCAAGGATGATCCTATGGCA+AGG	0.610079	4_3:+1310969	Msa0623860:CDS
AAGAAAGTTGGTAATTGCAG+AGG	0.612565	4_3:+1308824	Msa0623860:five_prime_UTR
ACATCTTTGATATCTCCGAA+GGG	0.644287	4_3:-1308972	None:intergenic
ATGCGGATACTTGGTTTGAG+CGG	0.657420	4_3:+1310822	Msa0623860:CDS
AACAATGGCGATGATGCAAG+GGG	0.670281	4_3:+1308875	Msa0623860:exon
CTTCCTGAAAAGATTAAGGG+TGG	0.671578	4_3:+1309137	Msa0623860:CDS
AAGAACACTCTCTACGTCGG+TGG	0.677653	4_3:+1308903	Msa0623860:CDS
ACCATCCATATTATCCATGG+CGG	0.687486	4_3:-1309075	None:intergenic
CAAAAGAACACTCTCTACGT+CGG	0.696745	4_3:+1308900	Msa0623860:CDS
GGGTATGTGAGCAATTGAAG+TGG	0.702513	4_3:+1308732	Msa0623860:five_prime_UTR
GTATGTGAGCAATTGAAGTG+GGG	0.720583	4_3:+1308734	Msa0623860:five_prime_UTR
GAACGAATCAATCCTTCACG+CGG	0.736030	4_3:+1308941	Msa0623860:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAATAAAATAAAAGAAAGT+TGG	+	chr4_3:1308812-1308831	Msa0623860:five_prime_UTR	10.0%
!!	ATTATTATGAGATAAATAAA+AGG	+	chr4_3:1309291-1309310	Msa0623860:intron	10.0%
!!	TTATTATGAGATAAATAAAA+GGG	+	chr4_3:1309292-1309311	Msa0623860:intron	10.0%
!!!	ATTTTGAATTAGATTTTATT+TGG	+	chr4_3:1310010-1310029	Msa0623860:intron	10.0%
!!!	TAAGTTGAAAAATTAATATT+AGG	-	chr4_3:1310136-1310155	None:intergenic	10.0%
!!	AAAATAAAATAAAAGAAAGT+TGG	+	chr4_3:1308812-1308831	Msa0623860:five_prime_UTR	10.0%
!!	ATTATTATGAGATAAATAAA+AGG	+	chr4_3:1309291-1309310	Msa0623860:intron	10.0%
!!	TTATTATGAGATAAATAAAA+GGG	+	chr4_3:1309292-1309311	Msa0623860:intron	10.0%
!!!	ATTTTGAATTAGATTTTATT+TGG	+	chr4_3:1310010-1310029	Msa0623860:intron	10.0%
!!!	TAAGTTGAAAAATTAATATT+AGG	-	chr4_3:1310136-1310155	None:intergenic	10.0%
!!	AAACTTAAATTCATTTCTTT+AGG	-	chr4_3:1309573-1309592	None:intergenic	15.0%
!!	ACAAAAACAAATTCAATATT+AGG	+	chr4_3:1309742-1309761	Msa0623860:intron	15.0%
!!	CAAAAACAAATTCAATATTA+GGG	+	chr4_3:1309743-1309762	Msa0623860:intron	15.0%
!!	AAAAACAAATTCAATATTAG+GGG	+	chr4_3:1309744-1309763	Msa0623860:intron	15.0%
!!	TTTATTTGGTTAAATTGATT+CGG	+	chr4_3:1310024-1310043	Msa0623860:intron	15.0%
!!!	GTAGTTTTTATTATTTTTCT+TGG	+	chr4_3:1310276-1310295	Msa0623860:intron	15.0%
!!!	AATATTTTCAATTTTCAGTT+TGG	+	chr4_3:1310795-1310814	Msa0623860:intron	15.0%
!!!	ATATTTTCAATTTTCAGTTT+GGG	+	chr4_3:1310796-1310815	Msa0623860:intron	15.0%
!!	AAACTTAAATTCATTTCTTT+AGG	-	chr4_3:1309573-1309592	None:intergenic	15.0%
!!	ACAAAAACAAATTCAATATT+AGG	+	chr4_3:1309742-1309761	Msa0623860:intron	15.0%
!!	CAAAAACAAATTCAATATTA+GGG	+	chr4_3:1309743-1309762	Msa0623860:intron	15.0%
!!	AAAAACAAATTCAATATTAG+GGG	+	chr4_3:1309744-1309763	Msa0623860:intron	15.0%
!!	TTTATTTGGTTAAATTGATT+CGG	+	chr4_3:1310024-1310043	Msa0623860:intron	15.0%
!!!	GTAGTTTTTATTATTTTTCT+TGG	+	chr4_3:1310276-1310295	Msa0623860:intron	15.0%
!!!	AATATTTTCAATTTTCAGTT+TGG	+	chr4_3:1310795-1310814	Msa0623860:intron	15.0%
!!!	ATATTTTCAATTTTCAGTTT+GGG	+	chr4_3:1310796-1310815	Msa0623860:intron	15.0%
!!!	TGTATTTTTGGTTATTTGAT+GGG	+	chr4_3:1308712-1308731	Msa0623860:five_prime_UTR	20.0%
!!	TTTCAAACAAGAACATTAAA+AGG	+	chr4_3:1308770-1308789	Msa0623860:five_prime_UTR	20.0%
!!!	TTTTTCTTTGATGTGAAATT+GGG	-	chr4_3:1308796-1308815	None:intergenic	20.0%
!!!	ATTTTTCTTTGATGTGAAAT+TGG	-	chr4_3:1308797-1308816	None:intergenic	20.0%
!!	TTGATTATGTGTTTATGTTT+AGG	+	chr4_3:1309221-1309240	Msa0623860:intron	20.0%
!!	TGATTATGTGTTTATGTTTA+GGG	+	chr4_3:1309222-1309241	Msa0623860:intron	20.0%
!!	CTTAATGATTTAATGTTGAA+TGG	+	chr4_3:1309315-1309334	Msa0623860:intron	20.0%
!!!	ATGTTAGTAGTTAATTTGTT+AGG	+	chr4_3:1309841-1309860	Msa0623860:intron	20.0%
!!!	TGTTAGTAGTTAATTTGTTA+GGG	+	chr4_3:1309842-1309861	Msa0623860:intron	20.0%
!!!	AAATTGAGTTTGAAATAAGT+TGG	+	chr4_3:1310050-1310069	Msa0623860:intron	20.0%
!!	TTATAAAGTAACCAAAACAT+CGG	-	chr4_3:1310693-1310712	None:intergenic	20.0%
!!!	TGTATTTTTGGTTATTTGAT+GGG	+	chr4_3:1308712-1308731	Msa0623860:five_prime_UTR	20.0%
!!	TTTCAAACAAGAACATTAAA+AGG	+	chr4_3:1308770-1308789	Msa0623860:five_prime_UTR	20.0%
!!!	TTTTTCTTTGATGTGAAATT+GGG	-	chr4_3:1308796-1308815	None:intergenic	20.0%
!!!	ATTTTTCTTTGATGTGAAAT+TGG	-	chr4_3:1308797-1308816	None:intergenic	20.0%
!!	TTGATTATGTGTTTATGTTT+AGG	+	chr4_3:1309221-1309240	Msa0623860:intron	20.0%
!!	TGATTATGTGTTTATGTTTA+GGG	+	chr4_3:1309222-1309241	Msa0623860:intron	20.0%
!!	CTTAATGATTTAATGTTGAA+TGG	+	chr4_3:1309315-1309334	Msa0623860:intron	20.0%
!!!	ATGTTAGTAGTTAATTTGTT+AGG	+	chr4_3:1309841-1309860	Msa0623860:intron	20.0%
!!!	TGTTAGTAGTTAATTTGTTA+GGG	+	chr4_3:1309842-1309861	Msa0623860:intron	20.0%
!!!	AAATTGAGTTTGAAATAAGT+TGG	+	chr4_3:1310050-1310069	Msa0623860:intron	20.0%
!!	TTATAAAGTAACCAAAACAT+CGG	-	chr4_3:1310693-1310712	None:intergenic	20.0%
!!!	GTGTATTTTTGGTTATTTGA+TGG	+	chr4_3:1308711-1308730	Msa0623860:five_prime_UTR	25.0%
!	AAGAGAATCAAAGATTTACT+TGG	-	chr4_3:1309185-1309204	None:intergenic	25.0%
!	AATCATGGGTAGTTAAATTA+AGG	+	chr4_3:1309533-1309552	Msa0623860:intron	25.0%
!	TACTAAATAGTGTATTGCAA+AGG	-	chr4_3:1309599-1309618	None:intergenic	25.0%
!!!	GTTAGTAGTTAATTTGTTAG+GGG	+	chr4_3:1309843-1309862	Msa0623860:intron	25.0%
!	AAACTGTAATACTGAATTGA+AGG	+	chr4_3:1310346-1310365	Msa0623860:intron	25.0%
!!!	TAGCGATTGATTTTTGATTT+AGG	+	chr4_3:1310444-1310463	Msa0623860:intron	25.0%
!!!	AGCGATTGATTTTTGATTTA+GGG	+	chr4_3:1310445-1310464	Msa0623860:intron	25.0%
!!!	CAGAGAATTCATTTTTTATC+CGG	+	chr4_3:1310601-1310620	Msa0623860:intron	25.0%
!!!	CTTTTTTTTATCCGATGTTT+TGG	+	chr4_3:1310679-1310698	Msa0623860:intron	25.0%
!	ACTTTATAAGCTACATGTAT+AGG	+	chr4_3:1310704-1310723	Msa0623860:intron	25.0%
!	TGAAATGATCTTAACTTTCT+TGG	+	chr4_3:1310734-1310753	Msa0623860:intron	25.0%
!!	TTCAAGTTTATCAATTGTGT+CGG	+	chr4_3:1310757-1310776	Msa0623860:intron	25.0%
!!!	GTGTATTTTTGGTTATTTGA+TGG	+	chr4_3:1308711-1308730	Msa0623860:five_prime_UTR	25.0%
!	AAGAGAATCAAAGATTTACT+TGG	-	chr4_3:1309185-1309204	None:intergenic	25.0%
!	AATCATGGGTAGTTAAATTA+AGG	+	chr4_3:1309533-1309552	Msa0623860:intron	25.0%
!	TACTAAATAGTGTATTGCAA+AGG	-	chr4_3:1309599-1309618	None:intergenic	25.0%
!!!	GTTAGTAGTTAATTTGTTAG+GGG	+	chr4_3:1309843-1309862	Msa0623860:intron	25.0%
!	AAACTGTAATACTGAATTGA+AGG	+	chr4_3:1310346-1310365	Msa0623860:intron	25.0%
!!!	TAGCGATTGATTTTTGATTT+AGG	+	chr4_3:1310444-1310463	Msa0623860:intron	25.0%
!!!	AGCGATTGATTTTTGATTTA+GGG	+	chr4_3:1310445-1310464	Msa0623860:intron	25.0%
!!!	CAGAGAATTCATTTTTTATC+CGG	+	chr4_3:1310601-1310620	Msa0623860:intron	25.0%
!!!	CTTTTTTTTATCCGATGTTT+TGG	+	chr4_3:1310679-1310698	Msa0623860:intron	25.0%
!	ACTTTATAAGCTACATGTAT+AGG	+	chr4_3:1310704-1310723	Msa0623860:intron	25.0%
!	TGAAATGATCTTAACTTTCT+TGG	+	chr4_3:1310734-1310753	Msa0623860:intron	25.0%
!!	TTCAAGTTTATCAATTGTGT+CGG	+	chr4_3:1310757-1310776	Msa0623860:intron	25.0%
	AAAAATACACTTGCTCTTGT+TGG	-	chr4_3:1308701-1308720	None:intergenic	30.0%
!	AACAAGAGCAAGTGTATTTT+TGG	+	chr4_3:1308700-1308719	Msa0623860:five_prime_UTR	30.0%
	TTCAGTTCAGTTAAGAGTTA+GGG	-	chr4_3:1308852-1308871	None:intergenic	30.0%
	TTTCAGTTCAGTTAAGAGTT+AGG	-	chr4_3:1308853-1308872	None:intergenic	30.0%
!	TAGGGTTTGATGATTGAATT+AGG	+	chr4_3:1309240-1309259	Msa0623860:intron	30.0%
	TTACTGAACTCAAACATTAG+TGG	+	chr4_3:1309357-1309376	Msa0623860:intron	30.0%
	GCATTTGCAATATTGTCAAA+TGG	+	chr4_3:1309390-1309409	Msa0623860:intron	30.0%
!	TATTGTCAAATGGTGTCAAA+TGG	+	chr4_3:1309400-1309419	Msa0623860:intron	30.0%
	TCTTCAATATGGGAAATCAT+GGG	+	chr4_3:1309519-1309538	Msa0623860:intron	30.0%
!	ATGATATAGCTGCTATTTGA+CGG	-	chr4_3:1309628-1309647	None:intergenic	30.0%
!!!	GAAACTGTTTTTTCTCTTAC+AGG	+	chr4_3:1309815-1309834	Msa0623860:intron	30.0%
	TATTAGTAGCTTCTGATGTT+AGG	+	chr4_3:1309876-1309895	Msa0623860:intron	30.0%
	ATTAGTAGCTTCTGATGTTA+GGG	+	chr4_3:1309877-1309896	Msa0623860:intron	30.0%
	TTTGAGAGTAAAAACAGTCA+AGG	-	chr4_3:1310089-1310108	None:intergenic	30.0%
	TTGTCTTTCCATTGGAAATT+GGG	-	chr4_3:1310313-1310332	None:intergenic	30.0%
	TTTGTCTTTCCATTGGAAAT+TGG	-	chr4_3:1310314-1310333	None:intergenic	30.0%
!!!	ATCTTGTTTTGTCTTTCCAT+TGG	-	chr4_3:1310321-1310340	None:intergenic	30.0%
!	TTTTCAATTTTCAGTTTGGG+CGG	+	chr4_3:1310799-1310818	Msa0623860:intron	30.0%
	GAAAGAAGAAATTGAGATCA+AGG	+	chr4_3:1310952-1310971	Msa0623860:CDS	30.0%
	AAAAATACACTTGCTCTTGT+TGG	-	chr4_3:1308701-1308720	None:intergenic	30.0%
!	AACAAGAGCAAGTGTATTTT+TGG	+	chr4_3:1308700-1308719	Msa0623860:five_prime_UTR	30.0%
	TTCAGTTCAGTTAAGAGTTA+GGG	-	chr4_3:1308852-1308871	None:intergenic	30.0%
	TTTCAGTTCAGTTAAGAGTT+AGG	-	chr4_3:1308853-1308872	None:intergenic	30.0%
!	TAGGGTTTGATGATTGAATT+AGG	+	chr4_3:1309240-1309259	Msa0623860:intron	30.0%
	TTACTGAACTCAAACATTAG+TGG	+	chr4_3:1309357-1309376	Msa0623860:intron	30.0%
	GCATTTGCAATATTGTCAAA+TGG	+	chr4_3:1309390-1309409	Msa0623860:intron	30.0%
!	TATTGTCAAATGGTGTCAAA+TGG	+	chr4_3:1309400-1309419	Msa0623860:intron	30.0%
	TCTTCAATATGGGAAATCAT+GGG	+	chr4_3:1309519-1309538	Msa0623860:intron	30.0%
!	ATGATATAGCTGCTATTTGA+CGG	-	chr4_3:1309628-1309647	None:intergenic	30.0%
!!!	GAAACTGTTTTTTCTCTTAC+AGG	+	chr4_3:1309815-1309834	Msa0623860:intron	30.0%
	TATTAGTAGCTTCTGATGTT+AGG	+	chr4_3:1309876-1309895	Msa0623860:intron	30.0%
	ATTAGTAGCTTCTGATGTTA+GGG	+	chr4_3:1309877-1309896	Msa0623860:intron	30.0%
	TTTGAGAGTAAAAACAGTCA+AGG	-	chr4_3:1310089-1310108	None:intergenic	30.0%
	TTGTCTTTCCATTGGAAATT+GGG	-	chr4_3:1310313-1310332	None:intergenic	30.0%
	TTTGTCTTTCCATTGGAAAT+TGG	-	chr4_3:1310314-1310333	None:intergenic	30.0%
!!!	ATCTTGTTTTGTCTTTCCAT+TGG	-	chr4_3:1310321-1310340	None:intergenic	30.0%
!	TTTTCAATTTTCAGTTTGGG+CGG	+	chr4_3:1310799-1310818	Msa0623860:intron	30.0%
	GAAAGAAGAAATTGAGATCA+AGG	+	chr4_3:1310952-1310971	Msa0623860:CDS	30.0%
!!	AAGAAAGTTGGTAATTGCAG+AGG	+	chr4_3:1308824-1308843	Msa0623860:five_prime_UTR	35.0%
	AACTGAACTGAAAGCAACAA+TGG	+	chr4_3:1308860-1308879	Msa0623860:exon	35.0%
	ACATCTTTGATATCTCCGAA+GGG	-	chr4_3:1308975-1308994	None:intergenic	35.0%
	TGCTCTTCCTGAAAAGATTA+AGG	+	chr4_3:1309133-1309152	Msa0623860:CDS	35.0%
	GCTCTTCCTGAAAAGATTAA+GGG	+	chr4_3:1309134-1309153	Msa0623860:CDS	35.0%
	CTCTTCAATATGGGAAATCA+TGG	+	chr4_3:1309518-1309537	Msa0623860:intron	35.0%
!	AGCAATTTGTTCAAATTCCG+TGG	-	chr4_3:1309657-1309676	None:intergenic	35.0%
!	CAGTATGTGTCTTTAGTTCA+GGG	+	chr4_3:1309786-1309805	Msa0623860:intron	35.0%
!!	GTTAATTTGTTAGGGGATGA+TGG	+	chr4_3:1309850-1309869	Msa0623860:intron	35.0%
	TTAGTAGCTTCTGATGTTAG+GGG	+	chr4_3:1309878-1309897	Msa0623860:intron	35.0%
!	CTCTTTTCGTTCTCTTTCAA+TGG	-	chr4_3:1310416-1310435	None:intergenic	35.0%
!!!	TAGGGTTAGAGTTTTGTTGA+AGG	+	chr4_3:1310463-1310482	Msa0623860:intron	35.0%
	ACGAAACGACGTCAAATTTA+AGG	+	chr4_3:1310572-1310591	Msa0623860:intron	35.0%
!	AACGACGTCAAATTTAAGGT+CGG	+	chr4_3:1310576-1310595	Msa0623860:intron	35.0%
	AAATCCATTGACACTCAATC+CGG	-	chr4_3:1310623-1310642	None:intergenic	35.0%
	CGGATAAAAAAAAGCAAGTG+TGG	-	chr4_3:1310673-1310692	None:intergenic	35.0%
!!	AAGAAAGTTGGTAATTGCAG+AGG	+	chr4_3:1308824-1308843	Msa0623860:five_prime_UTR	35.0%
	AACTGAACTGAAAGCAACAA+TGG	+	chr4_3:1308860-1308879	Msa0623860:exon	35.0%
	ACATCTTTGATATCTCCGAA+GGG	-	chr4_3:1308975-1308994	None:intergenic	35.0%
	TGCTCTTCCTGAAAAGATTA+AGG	+	chr4_3:1309133-1309152	Msa0623860:CDS	35.0%
	GCTCTTCCTGAAAAGATTAA+GGG	+	chr4_3:1309134-1309153	Msa0623860:CDS	35.0%
	CTCTTCAATATGGGAAATCA+TGG	+	chr4_3:1309518-1309537	Msa0623860:intron	35.0%
!	AGCAATTTGTTCAAATTCCG+TGG	-	chr4_3:1309657-1309676	None:intergenic	35.0%
!	CAGTATGTGTCTTTAGTTCA+GGG	+	chr4_3:1309786-1309805	Msa0623860:intron	35.0%
!!	GTTAATTTGTTAGGGGATGA+TGG	+	chr4_3:1309850-1309869	Msa0623860:intron	35.0%
	TTAGTAGCTTCTGATGTTAG+GGG	+	chr4_3:1309878-1309897	Msa0623860:intron	35.0%
!	CTCTTTTCGTTCTCTTTCAA+TGG	-	chr4_3:1310416-1310435	None:intergenic	35.0%
!!!	TAGGGTTAGAGTTTTGTTGA+AGG	+	chr4_3:1310463-1310482	Msa0623860:intron	35.0%
	ACGAAACGACGTCAAATTTA+AGG	+	chr4_3:1310572-1310591	Msa0623860:intron	35.0%
!	AACGACGTCAAATTTAAGGT+CGG	+	chr4_3:1310576-1310595	Msa0623860:intron	35.0%
	AAATCCATTGACACTCAATC+CGG	-	chr4_3:1310623-1310642	None:intergenic	35.0%
	CGGATAAAAAAAAGCAAGTG+TGG	-	chr4_3:1310673-1310692	None:intergenic	35.0%
	GGTATGTGAGCAATTGAAGT+GGG	+	chr4_3:1308733-1308752	Msa0623860:five_prime_UTR	40.0%
	GTATGTGAGCAATTGAAGTG+GGG	+	chr4_3:1308734-1308753	Msa0623860:five_prime_UTR	40.0%
	CAAAAGAACACTCTCTACGT+CGG	+	chr4_3:1308900-1308919	Msa0623860:CDS	40.0%
	CACATCTTTGATATCTCCGA+AGG	-	chr4_3:1308976-1308995	None:intergenic	40.0%
!	CTTCGTCACTTTCCTTGAAA+GGG	+	chr4_3:1309040-1309059	Msa0623860:CDS	40.0%
	ACCATCCATATTATCCATGG+CGG	-	chr4_3:1309078-1309097	None:intergenic	40.0%
	AGCACCATCCATATTATCCA+TGG	-	chr4_3:1309081-1309100	None:intergenic	40.0%
	CTTCCTGAAAAGATTAAGGG+TGG	+	chr4_3:1309137-1309156	Msa0623860:CDS	40.0%
!	TCACCACCCTTAATCTTTTC+AGG	-	chr4_3:1309143-1309162	None:intergenic	40.0%
	AAGATTAAGGGTGGTGAACA+AGG	+	chr4_3:1309146-1309165	Msa0623860:CDS	40.0%
	AAACGCGATGAGTTTGCAAT+AGG	+	chr4_3:1309458-1309477	Msa0623860:intron	40.0%
	TCCTTAGCTGCTCTTCAATA+TGG	+	chr4_3:1309508-1309527	Msa0623860:intron	40.0%
	CCTTAGCTGCTCTTCAATAT+GGG	+	chr4_3:1309509-1309528	Msa0623860:intron	40.0%
	AGCTATATCATTGTACGCCA+CGG	+	chr4_3:1309637-1309656	Msa0623860:intron	40.0%
	CTATCCTCGATTGACAATGA+TGG	+	chr4_3:1309684-1309703	Msa0623860:intron	40.0%
	CAAACCATCATTGTCAATCG+AGG	-	chr4_3:1309691-1309710	None:intergenic	40.0%
!	ACAGAGTATCCTTCCACTTA+GGG	-	chr4_3:1309718-1309737	None:intergenic	40.0%
	TAGGGGAATTGCTTAGAATG+TGG	+	chr4_3:1309761-1309780	Msa0623860:intron	40.0%
!	GCAGTATGTGTCTTTAGTTC+AGG	+	chr4_3:1309785-1309804	Msa0623860:intron	40.0%
!	ATGACTTTTACGCAAGTCCA+GGG	-	chr4_3:1309937-1309956	None:intergenic	40.0%
!	AATGACTTTTACGCAAGTCC+AGG	-	chr4_3:1309938-1309957	None:intergenic	40.0%
	GGACTTGCGTAAAAGTCATT+CGG	+	chr4_3:1309938-1309957	Msa0623860:intron	40.0%
	AAACCATTGGGCTACTCATT+TGG	+	chr4_3:1309972-1309991	Msa0623860:intron	40.0%
	ATTCCAAATGAGTAGCCCAA+TGG	-	chr4_3:1309978-1309997	None:intergenic	40.0%
	AGAACGTTCCCAATTTCCAA+TGG	+	chr4_3:1310302-1310321	Msa0623860:intron	40.0%
	ATTTGACGTCGTTTCGTGAA+AGG	-	chr4_3:1310569-1310588	None:intergenic	40.0%
	TTATCCGGATTGAGTGTCAA+TGG	+	chr4_3:1310616-1310635	Msa0623860:intron	40.0%
!	GGATTGAGTGTCAATGGATT+TGG	+	chr4_3:1310622-1310641	Msa0623860:intron	40.0%
!!	TATCAATTGTGTCGGTTGTG+TGG	+	chr4_3:1310765-1310784	Msa0623860:intron	40.0%
	AGAGAATAAAGCTGCTATGC+TGG	+	chr4_3:1310880-1310899	Msa0623860:CDS	40.0%
	TGAGATCAAGGATGATCCTA+TGG	+	chr4_3:1310964-1310983	Msa0623860:CDS	40.0%
	GGTATGTGAGCAATTGAAGT+GGG	+	chr4_3:1308733-1308752	Msa0623860:five_prime_UTR	40.0%
	GTATGTGAGCAATTGAAGTG+GGG	+	chr4_3:1308734-1308753	Msa0623860:five_prime_UTR	40.0%
	CAAAAGAACACTCTCTACGT+CGG	+	chr4_3:1308900-1308919	Msa0623860:CDS	40.0%
	CACATCTTTGATATCTCCGA+AGG	-	chr4_3:1308976-1308995	None:intergenic	40.0%
!	CTTCGTCACTTTCCTTGAAA+GGG	+	chr4_3:1309040-1309059	Msa0623860:CDS	40.0%
	ACCATCCATATTATCCATGG+CGG	-	chr4_3:1309078-1309097	None:intergenic	40.0%
	AGCACCATCCATATTATCCA+TGG	-	chr4_3:1309081-1309100	None:intergenic	40.0%
	CTTCCTGAAAAGATTAAGGG+TGG	+	chr4_3:1309137-1309156	Msa0623860:CDS	40.0%
!	TCACCACCCTTAATCTTTTC+AGG	-	chr4_3:1309143-1309162	None:intergenic	40.0%
	AAGATTAAGGGTGGTGAACA+AGG	+	chr4_3:1309146-1309165	Msa0623860:CDS	40.0%
	AAACGCGATGAGTTTGCAAT+AGG	+	chr4_3:1309458-1309477	Msa0623860:intron	40.0%
	TCCTTAGCTGCTCTTCAATA+TGG	+	chr4_3:1309508-1309527	Msa0623860:intron	40.0%
	CCTTAGCTGCTCTTCAATAT+GGG	+	chr4_3:1309509-1309528	Msa0623860:intron	40.0%
	AGCTATATCATTGTACGCCA+CGG	+	chr4_3:1309637-1309656	Msa0623860:intron	40.0%
	CTATCCTCGATTGACAATGA+TGG	+	chr4_3:1309684-1309703	Msa0623860:intron	40.0%
	CAAACCATCATTGTCAATCG+AGG	-	chr4_3:1309691-1309710	None:intergenic	40.0%
!	ACAGAGTATCCTTCCACTTA+GGG	-	chr4_3:1309718-1309737	None:intergenic	40.0%
	TAGGGGAATTGCTTAGAATG+TGG	+	chr4_3:1309761-1309780	Msa0623860:intron	40.0%
!	GCAGTATGTGTCTTTAGTTC+AGG	+	chr4_3:1309785-1309804	Msa0623860:intron	40.0%
!	ATGACTTTTACGCAAGTCCA+GGG	-	chr4_3:1309937-1309956	None:intergenic	40.0%
!	AATGACTTTTACGCAAGTCC+AGG	-	chr4_3:1309938-1309957	None:intergenic	40.0%
	GGACTTGCGTAAAAGTCATT+CGG	+	chr4_3:1309938-1309957	Msa0623860:intron	40.0%
	AAACCATTGGGCTACTCATT+TGG	+	chr4_3:1309972-1309991	Msa0623860:intron	40.0%
	ATTCCAAATGAGTAGCCCAA+TGG	-	chr4_3:1309978-1309997	None:intergenic	40.0%
	AGAACGTTCCCAATTTCCAA+TGG	+	chr4_3:1310302-1310321	Msa0623860:intron	40.0%
	ATTTGACGTCGTTTCGTGAA+AGG	-	chr4_3:1310569-1310588	None:intergenic	40.0%
	TTATCCGGATTGAGTGTCAA+TGG	+	chr4_3:1310616-1310635	Msa0623860:intron	40.0%
!	GGATTGAGTGTCAATGGATT+TGG	+	chr4_3:1310622-1310641	Msa0623860:intron	40.0%
!!	TATCAATTGTGTCGGTTGTG+TGG	+	chr4_3:1310765-1310784	Msa0623860:intron	40.0%
	AGAGAATAAAGCTGCTATGC+TGG	+	chr4_3:1310880-1310899	Msa0623860:CDS	40.0%
	TGAGATCAAGGATGATCCTA+TGG	+	chr4_3:1310964-1310983	Msa0623860:CDS	40.0%
	GGGTATGTGAGCAATTGAAG+TGG	+	chr4_3:1308732-1308751	Msa0623860:five_prime_UTR	45.0%
	CAACAATGGCGATGATGCAA+GGG	+	chr4_3:1308874-1308893	Msa0623860:exon	45.0%
	AACAATGGCGATGATGCAAG+GGG	+	chr4_3:1308875-1308894	Msa0623860:exon	45.0%
	GAACGAATCAATCCTTCACG+CGG	+	chr4_3:1308941-1308960	Msa0623860:CDS	45.0%
!!	ACGCAGAAGCATCGTTCTTT+CGG	+	chr4_3:1309017-1309036	Msa0623860:CDS	45.0%
!	GCTTCGTCACTTTCCTTGAA+AGG	+	chr4_3:1309039-1309058	Msa0623860:CDS	45.0%
	ATCCATATTATCCATGGCGG+CGG	-	chr4_3:1309075-1309094	None:intergenic	45.0%
!	ATGGATGGTGCTGAACTCTA+TGG	+	chr4_3:1309089-1309108	Msa0623860:CDS	45.0%
	TTAAGGGTGGTGAACAAGGA+TGG	+	chr4_3:1309150-1309169	Msa0623860:CDS	45.0%
	TAAGGGTGGTGAACAAGGAT+GGG	+	chr4_3:1309151-1309170	Msa0623860:CDS	45.0%
	AATGGTTGCTCTAGCATAGC+AGG	+	chr4_3:1309418-1309437	Msa0623860:intron	45.0%
	ATGGTTGCTCTAGCATAGCA+GGG	+	chr4_3:1309419-1309438	Msa0623860:intron	45.0%
	CCCATATTGAAGAGCAGCTA+AGG	-	chr4_3:1309512-1309531	None:intergenic	45.0%
!!	GATGGTTTGTTTCCCCTAAG+TGG	+	chr4_3:1309702-1309721	Msa0623860:intron	45.0%
	GTTTGTTTCCCCTAAGTGGA+AGG	+	chr4_3:1309706-1309725	Msa0623860:intron	45.0%
!	CAGAGTATCCTTCCACTTAG+GGG	-	chr4_3:1309717-1309736	None:intergenic	45.0%
!	CACAGAGTATCCTTCCACTT+AGG	-	chr4_3:1309719-1309738	None:intergenic	45.0%
	TAGCTTCTGATGTTAGGGGA+TGG	+	chr4_3:1309882-1309901	Msa0623860:intron	45.0%
	AGCTTCTGATGTTAGGGGAT+GGG	+	chr4_3:1309883-1309902	Msa0623860:intron	45.0%
	GTGTCCACGCTTAAACCATT+GGG	+	chr4_3:1309960-1309979	Msa0623860:intron	45.0%
!	GTCAATGGATTTGGCTTCTC+TGG	+	chr4_3:1310631-1310650	Msa0623860:intron	45.0%
!!	AAGTGTGGCCTTTGAAACGA+GGG	-	chr4_3:1310658-1310677	None:intergenic	45.0%
!	ATTTTCAGTTTGGGCGGATG+CGG	+	chr4_3:1310805-1310824	Msa0623860:intron	45.0%
!	ATGCGGATACTTGGTTTGAG+CGG	+	chr4_3:1310822-1310841	Msa0623860:CDS	45.0%
!!	CAGCTTTATTCTCTGCTTCG+AGG	-	chr4_3:1310874-1310893	None:intergenic	45.0%
	TTTCTCTCCTTCTCGCTCTT+CGG	-	chr4_3:1310936-1310955	None:intergenic	45.0%
	TCAAGGATGATCCTATGGCA+AGG	+	chr4_3:1310969-1310988	Msa0623860:CDS	45.0%
	CAAGGATGATCCTATGGCAA+GGG	+	chr4_3:1310970-1310989	Msa0623860:CDS	45.0%
	GGGTATGTGAGCAATTGAAG+TGG	+	chr4_3:1308732-1308751	Msa0623860:five_prime_UTR	45.0%
	CAACAATGGCGATGATGCAA+GGG	+	chr4_3:1308874-1308893	Msa0623860:exon	45.0%
	AACAATGGCGATGATGCAAG+GGG	+	chr4_3:1308875-1308894	Msa0623860:exon	45.0%
	GAACGAATCAATCCTTCACG+CGG	+	chr4_3:1308941-1308960	Msa0623860:CDS	45.0%
!!	ACGCAGAAGCATCGTTCTTT+CGG	+	chr4_3:1309017-1309036	Msa0623860:CDS	45.0%
!	GCTTCGTCACTTTCCTTGAA+AGG	+	chr4_3:1309039-1309058	Msa0623860:CDS	45.0%
	ATCCATATTATCCATGGCGG+CGG	-	chr4_3:1309075-1309094	None:intergenic	45.0%
!	ATGGATGGTGCTGAACTCTA+TGG	+	chr4_3:1309089-1309108	Msa0623860:CDS	45.0%
	TTAAGGGTGGTGAACAAGGA+TGG	+	chr4_3:1309150-1309169	Msa0623860:CDS	45.0%
	TAAGGGTGGTGAACAAGGAT+GGG	+	chr4_3:1309151-1309170	Msa0623860:CDS	45.0%
	AATGGTTGCTCTAGCATAGC+AGG	+	chr4_3:1309418-1309437	Msa0623860:intron	45.0%
	ATGGTTGCTCTAGCATAGCA+GGG	+	chr4_3:1309419-1309438	Msa0623860:intron	45.0%
	CCCATATTGAAGAGCAGCTA+AGG	-	chr4_3:1309512-1309531	None:intergenic	45.0%
!!	GATGGTTTGTTTCCCCTAAG+TGG	+	chr4_3:1309702-1309721	Msa0623860:intron	45.0%
	GTTTGTTTCCCCTAAGTGGA+AGG	+	chr4_3:1309706-1309725	Msa0623860:intron	45.0%
!	CAGAGTATCCTTCCACTTAG+GGG	-	chr4_3:1309717-1309736	None:intergenic	45.0%
!	CACAGAGTATCCTTCCACTT+AGG	-	chr4_3:1309719-1309738	None:intergenic	45.0%
	TAGCTTCTGATGTTAGGGGA+TGG	+	chr4_3:1309882-1309901	Msa0623860:intron	45.0%
	AGCTTCTGATGTTAGGGGAT+GGG	+	chr4_3:1309883-1309902	Msa0623860:intron	45.0%
	GTGTCCACGCTTAAACCATT+GGG	+	chr4_3:1309960-1309979	Msa0623860:intron	45.0%
!	GTCAATGGATTTGGCTTCTC+TGG	+	chr4_3:1310631-1310650	Msa0623860:intron	45.0%
!!	AAGTGTGGCCTTTGAAACGA+GGG	-	chr4_3:1310658-1310677	None:intergenic	45.0%
!	ATTTTCAGTTTGGGCGGATG+CGG	+	chr4_3:1310805-1310824	Msa0623860:intron	45.0%
!	ATGCGGATACTTGGTTTGAG+CGG	+	chr4_3:1310822-1310841	Msa0623860:CDS	45.0%
!!	CAGCTTTATTCTCTGCTTCG+AGG	-	chr4_3:1310874-1310893	None:intergenic	45.0%
	TTTCTCTCCTTCTCGCTCTT+CGG	-	chr4_3:1310936-1310955	None:intergenic	45.0%
	TCAAGGATGATCCTATGGCA+AGG	+	chr4_3:1310969-1310988	Msa0623860:CDS	45.0%
	CAAGGATGATCCTATGGCAA+GGG	+	chr4_3:1310970-1310989	Msa0623860:CDS	45.0%
!!	ATAAATATATTCATATTATT+TGG	-	chr4_3:1308661-1308680	None:intergenic	5.0%
!!	ATAAATATATTCATATTATT+TGG	-	chr4_3:1308661-1308680	None:intergenic	5.0%
	GCAACAATGGCGATGATGCA+AGG	+	chr4_3:1308873-1308892	Msa0623860:exon	50.0%
	AAGAACACTCTCTACGTCGG+TGG	+	chr4_3:1308903-1308922	Msa0623860:CDS	50.0%
	TCTCTACGTCGGTGGTTTAG+CGG	+	chr4_3:1308911-1308930	Msa0623860:CDS	50.0%
	TTCTGCGTTGCTTGGTCAAG+CGG	-	chr4_3:1309005-1309024	None:intergenic	50.0%
	AACGATGCTTCTGCGTTGCT+TGG	-	chr4_3:1309013-1309032	None:intergenic	50.0%
!!	CGGAAGCATCTTCCCTTTCA+AGG	-	chr4_3:1309055-1309074	None:intergenic	50.0%
	TTCCGCCGCCATGGATAATA+TGG	+	chr4_3:1309070-1309089	Msa0623860:CDS	50.0%
	GCCGCCATGGATAATATGGA+TGG	+	chr4_3:1309074-1309093	Msa0623860:CDS	50.0%
	TTCTGATGTTAGGGGATGGG+AGG	+	chr4_3:1309886-1309905	Msa0623860:intron	50.0%
	GGTGTCCACGCTTAAACCAT+TGG	+	chr4_3:1309959-1309978	Msa0623860:intron	50.0%
	GTAGCCCAATGGTTTAAGCG+TGG	-	chr4_3:1309967-1309986	None:intergenic	50.0%
	TCTCTGGACCCTCGTTTCAA+AGG	+	chr4_3:1310647-1310666	Msa0623860:intron	50.0%
!!	CAAGTGTGGCCTTTGAAACG+AGG	-	chr4_3:1310659-1310678	None:intergenic	50.0%
	GCAACAATGGCGATGATGCA+AGG	+	chr4_3:1308873-1308892	Msa0623860:exon	50.0%
	AAGAACACTCTCTACGTCGG+TGG	+	chr4_3:1308903-1308922	Msa0623860:CDS	50.0%
	TCTCTACGTCGGTGGTTTAG+CGG	+	chr4_3:1308911-1308930	Msa0623860:CDS	50.0%
	TTCTGCGTTGCTTGGTCAAG+CGG	-	chr4_3:1309005-1309024	None:intergenic	50.0%
	AACGATGCTTCTGCGTTGCT+TGG	-	chr4_3:1309013-1309032	None:intergenic	50.0%
!!	CGGAAGCATCTTCCCTTTCA+AGG	-	chr4_3:1309055-1309074	None:intergenic	50.0%
	TTCCGCCGCCATGGATAATA+TGG	+	chr4_3:1309070-1309089	Msa0623860:CDS	50.0%
	GCCGCCATGGATAATATGGA+TGG	+	chr4_3:1309074-1309093	Msa0623860:CDS	50.0%
	TTCTGATGTTAGGGGATGGG+AGG	+	chr4_3:1309886-1309905	Msa0623860:intron	50.0%
	GGTGTCCACGCTTAAACCAT+TGG	+	chr4_3:1309959-1309978	Msa0623860:intron	50.0%
	GTAGCCCAATGGTTTAAGCG+TGG	-	chr4_3:1309967-1309986	None:intergenic	50.0%
	TCTCTGGACCCTCGTTTCAA+AGG	+	chr4_3:1310647-1310666	Msa0623860:intron	50.0%
!!	CAAGTGTGGCCTTTGAAACG+AGG	-	chr4_3:1310659-1310678	None:intergenic	50.0%
	TAGCTGCTGCGATTGAACCC+TGG	+	chr4_3:1309917-1309936	Msa0623860:intron	55.0%
	TTTGGGCGGATGCGGATACT+TGG	+	chr4_3:1310813-1310832	Msa0623860:CDS	55.0%
	GTTTGAGCGGCAGCAACAAG+AGG	+	chr4_3:1310835-1310854	Msa0623860:CDS	55.0%
	TGGCTGCTGAAGAACTGCAC+AGG	+	chr4_3:1310900-1310919	Msa0623860:CDS	55.0%
	CAAGTAGCCGAAGAGCGAGA+AGG	+	chr4_3:1310926-1310945	Msa0623860:CDS	55.0%
	TAGCTGCTGCGATTGAACCC+TGG	+	chr4_3:1309917-1309936	Msa0623860:intron	55.0%
	TTTGGGCGGATGCGGATACT+TGG	+	chr4_3:1310813-1310832	Msa0623860:CDS	55.0%
	GTTTGAGCGGCAGCAACAAG+AGG	+	chr4_3:1310835-1310854	Msa0623860:CDS	55.0%
	TGGCTGCTGAAGAACTGCAC+AGG	+	chr4_3:1310900-1310919	Msa0623860:CDS	55.0%
	CAAGTAGCCGAAGAGCGAGA+AGG	+	chr4_3:1310926-1310945	Msa0623860:CDS	55.0%
	CGTCGGTGGTTTAGCGGAAG+AGG	+	chr4_3:1308917-1308936	Msa0623860:CDS	60.0%
	AGGGTATGAACGCCGCGTGA+AGG	-	chr4_3:1308956-1308975	None:intergenic	60.0%
	CACGCGGCGTTCATACCCTT+CGG	+	chr4_3:1308957-1308976	Msa0623860:CDS	60.0%
	CGTCGGTGGTTTAGCGGAAG+AGG	+	chr4_3:1308917-1308936	Msa0623860:CDS	60.0%
	AGGGTATGAACGCCGCGTGA+AGG	-	chr4_3:1308956-1308975	None:intergenic	60.0%
	CACGCGGCGTTCATACCCTT+CGG	+	chr4_3:1308957-1308976	Msa0623860:CDS	60.0%
	GGAAGATGCTTCCGCCGCCA+TGG	+	chr4_3:1309061-1309080	Msa0623860:CDS	65.0%
	GGAAGATGCTTCCGCCGCCA+TGG	+	chr4_3:1309061-1309080	Msa0623860:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_3	gene	1308652	1310997	1308652	ID=Msa0623860;Name=Msa0623860
chr4_3	mRNA	1308652	1310997	1308652	ID=Msa0623860-mRNA-1;Parent=Msa0623860;Name=Msa0623860-mRNA-1;_AED=0.00;_eAED=0.00;_QI=227\|1\|0.5\|1\|1\|1\|2\|0\|164
chr4_3	exon	1308652	1309185	1308652	ID=Msa0623860-mRNA-1:exon:407;Parent=Msa0623860-mRNA-1
chr4_3	exon	1310813	1310997	1310813	ID=Msa0623860-mRNA-1:exon:408;Parent=Msa0623860-mRNA-1
chr4_3	five_prime_UTR	1308652	1308878	1308652	ID=Msa0623860-mRNA-1:five_prime_utr;Parent=Msa0623860-mRNA-1
chr4_3	CDS	1308879	1309185	1308879	ID=Msa0623860-mRNA-1:cds;Parent=Msa0623860-mRNA-1
chr4_3	CDS	1310813	1310997	1310813	ID=Msa0623860-mRNA-1:cds;Parent=Msa0623860-mRNA-1

Gene Sequence

>Msa0623860

ATGGCGATGATGCAAGGGGTTCAAAAGAACACTCTCTACGTCGGTGGTTTAGCGGAAGAGGTGAACGAATCAATCCTTCACGCGGCGTTCATACCCTTCGGAGATATCAAAGATGTGAAGACACCGCTTGACCAAGCAACGCAGAAGCATCGTTCTTTCGGCTTCGTCACTTTCCTTGAAAGGGAAGATGCTTCCGCCGCCATGGATAATATGGATGGTGCTGAACTCTATGGTCGTGTTCTTACTGTTAATTATGCTCTTCCTGAAAAGATTAAGGGTGGTGAACAAGGATGGGCTGCTCAACCAATTTGGGCGGATGCGGATACTTGGTTTGAGCGGCAGCAACAAGAGGAAGACATGCGTCGCCTCGAAGCAGAGAATAAAGCTGCTATGCTGGCTGCTGAAGAACTGCACAGGAAACAAGTAGCCGAAGAGCGAGAAGGAGAGAAAGAAGAAATTGAGATCAAGGATGATCCTATGGCAAGGGCTGAA

Protein sequence

>Msa0623860

MAMMQGVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDASAAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFERQQQEEDMRRLEAENKAAMLAAEELHRKQVAEEREGEKEEIEIKDDPMARAE