Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0105700 | XP_013466557.1 | 96.651 | 209 | 7 | 0 | 1 | 209 | 1 | 209 | 1.56e-148 | 421 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0105700 | sp|Q9CAB8|PXG5_ARATH | 63.187 | 182 | 67 | 0 | 24 | 205 | 9 | 190 | 7.89e-81 | 242 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0105700 | B7FI43 | 96.651 | 209 | 7 | 0 | 1 | 209 | 1 | 209 | 7.47e-149 | 421 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004840 | Msa0105700 | 0.800412 | 1.458755e-48 | -8.615850e-47 |
| Msa0011720 | Msa0105700 | 0.806155 | 9.436089e-50 | -8.615850e-47 |
| Msa0012040 | Msa0105700 | 0.847209 | 1.336297e-59 | -8.615850e-47 |
| Msa0014800 | Msa0105700 | 0.835722 | 1.422146e-56 | -8.615850e-47 |
| Msa0018210 | Msa0105700 | 0.816239 | 6.126311e-52 | -8.615850e-47 |
| Msa0026650 | Msa0105700 | 0.802980 | 4.336792e-49 | -8.615850e-47 |
| Msa0032610 | Msa0105700 | 0.802424 | 5.647133e-49 | -8.615850e-47 |
| Msa0044710 | Msa0105700 | 0.809823 | 1.564173e-50 | -8.615850e-47 |
| Msa0050730 | Msa0105700 | 0.812800 | 3.532925e-51 | -8.615850e-47 |
| Msa0050760 | Msa0105700 | 0.817240 | 3.654060e-52 | -8.615850e-47 |
| Msa0051860 | Msa0105700 | 0.801567 | 8.472695e-49 | -8.615850e-47 |
| Msa0051930 | Msa0105700 | 0.837417 | 5.263964e-57 | -8.615850e-47 |
| Msa0052030 | Msa0105700 | 0.847530 | 1.090726e-59 | -8.615850e-47 |
| Msa0061150 | Msa0105700 | 0.962637 | 4.086557e-121 | -8.615850e-47 |
| Msa0071240 | Msa0105700 | 0.856577 | 2.927706e-62 | -8.615850e-47 |
| Msa0078750 | Msa0105700 | 0.818993 | 1.466582e-52 | -8.615850e-47 |
| Msa0084940 | Msa0105700 | 0.813588 | 2.371832e-51 | -8.615850e-47 |
| Msa0091570 | Msa0105700 | 0.816079 | 6.653998e-52 | -8.615850e-47 |
| Msa0092990 | Msa0105700 | 0.831399 | 1.706288e-55 | -8.615850e-47 |
| Msa0094920 | Msa0105700 | 0.817936 | 2.546473e-52 | -8.615850e-47 |
| Msa0105700 | Msa0108560 | 0.818024 | 2.431800e-52 | -8.615850e-47 |
| Msa0105700 | Msa0111310 | 0.819555 | 1.092452e-52 | -8.615850e-47 |
| Msa0105700 | Msa0115270 | 0.806168 | 9.379140e-50 | -8.615850e-47 |
| Msa0105700 | Msa0115390 | 0.804164 | 2.464079e-49 | -8.615850e-47 |
| Msa0105700 | Msa0119850 | 0.807092 | 5.982899e-50 | -8.615850e-47 |
| Msa0105700 | Msa0120340 | 0.824598 | 7.401114e-54 | -8.615850e-47 |
| Msa0105700 | Msa0130520 | 0.807148 | 5.823580e-50 | -8.615850e-47 |
| Msa0105700 | Msa0148120 | 0.800361 | 1.494315e-48 | -8.615850e-47 |
| Msa0105700 | Msa0152170 | 0.973849 | 3.944963e-137 | -8.615850e-47 |
| Msa0105700 | Msa0172780 | 0.807035 | 6.153370e-50 | -8.615850e-47 |
| Msa0105700 | Msa0185640 | -0.805032 | 1.623600e-49 | -8.615850e-47 |
| Msa0105700 | Msa0220440 | 0.803374 | 3.593814e-49 | -8.615850e-47 |
| Msa0105700 | Msa0223290 | 0.807240 | 5.566508e-50 | -8.615850e-47 |
| Msa0105700 | Msa0223380 | 0.829316 | 5.510579e-55 | -8.615850e-47 |
| Msa0105700 | Msa0244270 | 0.801878 | 7.313389e-49 | -8.615850e-47 |
| Msa0105700 | Msa0256330 | 0.810595 | 1.065819e-50 | -8.615850e-47 |
| Msa0105700 | Msa0260210 | 0.818547 | 1.852200e-52 | -8.615850e-47 |
| Msa0105700 | Msa0266210 | 0.817162 | 3.804536e-52 | -8.615850e-47 |
| Msa0105700 | Msa0269450 | 0.830039 | 3.675271e-55 | -8.615850e-47 |
| Msa0105700 | Msa0287670 | 0.802798 | 4.728091e-49 | -8.615850e-47 |
| Msa0105700 | Msa0295330 | 0.800403 | 1.464935e-48 | -8.615850e-47 |
| Msa0105700 | Msa0304290 | 0.813339 | 2.690655e-51 | -8.615850e-47 |
| Msa0105700 | Msa0304330 | 0.814092 | 1.836668e-51 | -8.615850e-47 |
| Msa0105700 | Msa0305890 | 0.808749 | 2.658441e-50 | -8.615850e-47 |
| Msa0105700 | Msa0307470 | 0.830595 | 2.688608e-55 | -8.615850e-47 |
| Msa0105700 | Msa0309550 | 0.819869 | 9.260417e-53 | -8.615850e-47 |
| Msa0105700 | Msa0315290 | 0.801534 | 8.606118e-49 | -8.615850e-47 |
| Msa0105700 | Msa0326670 | 0.812205 | 4.766025e-51 | -8.615850e-47 |
| Msa0105700 | Msa0340810 | 0.808704 | 2.716741e-50 | -8.615850e-47 |
| Msa0105700 | Msa0344830 | 0.838948 | 2.123136e-57 | -8.615850e-47 |
| Msa0105700 | Msa0347610 | 0.817730 | 2.834186e-52 | -8.615850e-47 |
| Msa0105700 | Msa0350670 | 0.805633 | 1.214912e-49 | -8.615850e-47 |
| Msa0105700 | Msa0380040 | 0.847771 | 9.365439e-60 | -8.615850e-47 |
| Msa0105700 | Msa0388840 | 0.867157 | 1.683606e-65 | -8.615850e-47 |
| Msa0105700 | Msa0389810 | 0.879829 | 9.048139e-70 | -8.615850e-47 |
| Msa0105700 | Msa0394340 | 0.834576 | 2.767872e-56 | -8.615850e-47 |
| Msa0105700 | Msa0429290 | 0.844603 | 6.823504e-59 | -8.615850e-47 |
| Msa0105700 | Msa0431830 | 0.815705 | 8.061436e-52 | -8.615850e-47 |
| Msa0105700 | Msa0433530 | 0.850314 | 1.839929e-60 | -8.615850e-47 |
| Msa0105700 | Msa0442200 | 0.839378 | 1.642472e-57 | -8.615850e-47 |
| Msa0105700 | Msa0442850 | 0.827718 | 1.339906e-54 | -8.615850e-47 |
| Msa0105700 | Msa0449760 | 0.807511 | 4.878664e-50 | -8.615850e-47 |
| Msa0105700 | Msa0449830 | 0.800967 | 1.123948e-48 | -8.615850e-47 |
| Msa0105700 | Msa0465680 | -0.801628 | 8.233190e-49 | -8.615850e-47 |
| Msa0105700 | Msa0467900 | -0.807988 | 3.861299e-50 | -8.615850e-47 |
| Msa0105700 | Msa0467960 | -0.804799 | 1.816268e-49 | -8.615850e-47 |
| Msa0105700 | Msa0468130 | 0.874965 | 4.469240e-68 | -8.615850e-47 |
| Msa0105700 | Msa0473240 | 0.803031 | 4.233173e-49 | -8.615850e-47 |
| Msa0105700 | Msa0475240 | 0.823406 | 1.409060e-53 | -8.615850e-47 |
| Msa0105700 | Msa0475580 | 0.840670 | 7.559976e-58 | -8.615850e-47 |
| Msa0105700 | Msa0477260 | 0.849085 | 4.055689e-60 | -8.615850e-47 |
| Msa0105700 | Msa0480600 | 0.805412 | 1.351810e-49 | -8.615850e-47 |
| Msa0105700 | Msa0482190 | -0.809879 | 1.521252e-50 | -8.615850e-47 |
| Msa0105700 | Msa0484780 | 0.800044 | 1.733505e-48 | -8.615850e-47 |
| Msa0105700 | Msa0485500 | -0.803344 | 3.645450e-49 | -8.615850e-47 |
| Msa0105700 | Msa0488270 | 0.814358 | 1.605014e-51 | -8.615850e-47 |
| Msa0105700 | Msa0489610 | 0.848908 | 4.539964e-60 | -8.615850e-47 |
| Msa0105700 | Msa0500720 | 0.818892 | 1.546510e-52 | -8.615850e-47 |
| Msa0105700 | Msa0519220 | 0.842889 | 1.962924e-58 | -8.615850e-47 |
| Msa0105700 | Msa0540070 | 0.835108 | 2.032440e-56 | -8.615850e-47 |
| Msa0105700 | Msa0543900 | 0.810593 | 1.067121e-50 | -8.615850e-47 |
| Msa0105700 | Msa0545080 | 0.802827 | 4.663914e-49 | -8.615850e-47 |
| Msa0105700 | Msa0550430 | 0.804473 | 2.124427e-49 | -8.615850e-47 |
| Msa0105700 | Msa0553220 | -0.832877 | 7.357470e-56 | -8.615850e-47 |
| Msa0105700 | Msa0553460 | 0.833522 | 5.082136e-56 | -8.615850e-47 |
| Msa0105700 | Msa0555950 | 0.820915 | 5.330373e-53 | -8.615850e-47 |
| Msa0105700 | Msa0562440 | 0.827447 | 1.557113e-54 | -8.615850e-47 |
| Msa0105700 | Msa0564510 | 0.803213 | 3.881619e-49 | -8.615850e-47 |
| Msa0105700 | Msa0568240 | 0.822716 | 2.041236e-53 | -8.615850e-47 |
| Msa0105700 | Msa0570330 | 0.823203 | 1.571639e-53 | -8.615850e-47 |
| Msa0105700 | Msa0576600 | 0.802468 | 5.532104e-49 | -8.615850e-47 |
| Msa0105700 | Msa0577120 | 0.815930 | 7.183616e-52 | -8.615850e-47 |
| Msa0105700 | Msa0585900 | 0.808105 | 3.646985e-50 | -8.615850e-47 |
| Msa0105700 | Msa0587690 | 0.804046 | 2.606286e-49 | -8.615850e-47 |
| Msa0105700 | Msa0588240 | 0.800711 | 1.267752e-48 | -8.615850e-47 |
| Msa0105700 | Msa0599580 | 0.818747 | 1.667661e-52 | -8.615850e-47 |
| Msa0105700 | Msa0599770 | 0.806846 | 6.746013e-50 | -8.615850e-47 |
| Msa0105700 | Msa0607540 | 0.826659 | 2.402139e-54 | -8.615850e-47 |
| Msa0105700 | Msa0608710 | 0.843124 | 1.699032e-58 | -8.615850e-47 |
| Msa0105700 | Msa0610370 | 0.818077 | 2.365520e-52 | -8.615850e-47 |
| Msa0105700 | Msa0610590 | 0.803077 | 4.140119e-49 | -8.615850e-47 |
| Msa0105700 | Msa0617830 | 0.812206 | 4.763996e-51 | -8.615850e-47 |
| Msa0105700 | Msa0626030 | 0.804566 | 2.031491e-49 | -8.615850e-47 |
| Msa0105700 | Msa0628740 | 0.803827 | 2.894626e-49 | -8.615850e-47 |
| Msa0105700 | Msa0631990 | 0.831825 | 1.340136e-55 | -8.615850e-47 |
| Msa0105700 | Msa0638280 | 0.814545 | 1.458669e-51 | -8.615850e-47 |
| Msa0105700 | Msa0647450 | -0.835169 | 1.962308e-56 | -8.615850e-47 |
| Msa0105700 | Msa0647830 | 0.831161 | 1.952727e-55 | -8.615850e-47 |
| Msa0105700 | Msa0649130 | 0.814786 | 1.290422e-51 | -8.615850e-47 |
| Msa0105700 | Msa0650190 | 0.807755 | 4.327943e-50 | -8.615850e-47 |
| Msa0105700 | Msa0650900 | 0.825348 | 4.923379e-54 | -8.615850e-47 |
| Msa0105700 | Msa0653490 | 0.810583 | 1.072590e-50 | -8.615850e-47 |
| Msa0105700 | Msa0660300 | 0.839553 | 1.479177e-57 | -8.615850e-47 |
| Msa0105700 | Msa0662650 | 0.831181 | 1.930332e-55 | -8.615850e-47 |
| Msa0105700 | Msa0663920 | 0.818072 | 2.372456e-52 | -8.615850e-47 |
| Msa0105700 | Msa0666140 | 0.801404 | 9.147653e-49 | -8.615850e-47 |
| Msa0105700 | Msa0670660 | 0.852371 | 4.823280e-61 | -8.615850e-47 |
| Msa0105700 | Msa0673470 | 0.817049 | 4.032841e-52 | -8.615850e-47 |
| Msa0105700 | Msa0678820 | 0.822018 | 2.964200e-53 | -8.615850e-47 |
| Msa0105700 | Msa0690440 | 0.807452 | 5.020157e-50 | -8.615850e-47 |
| Msa0105700 | Msa0692110 | 0.847488 | 1.120691e-59 | -8.615850e-47 |
| Msa0105700 | Msa0694250 | 0.826227 | 3.045852e-54 | -8.615850e-47 |
| Msa0105700 | Msa0704730 | 0.826130 | 3.212462e-54 | -8.615850e-47 |
| Msa0105700 | Msa0708860 | 0.825763 | 3.926541e-54 | -8.615850e-47 |
| Msa0105700 | Msa0714340 | 0.805079 | 1.587563e-49 | -8.615850e-47 |
| Msa0105700 | Msa0723110 | 0.808801 | 2.590255e-50 | -8.615850e-47 |
| Msa0105700 | Msa0724560 | 0.827775 | 1.298394e-54 | -8.615850e-47 |
| Msa0105700 | Msa0731180 | 0.825507 | 4.515164e-54 | -8.615850e-47 |
| Msa0105700 | Msa0743260 | 0.831498 | 1.613635e-55 | -8.615850e-47 |
| Msa0105700 | Msa0756310 | 0.851838 | 6.835308e-61 | -8.615850e-47 |
| Msa0105700 | Msa0761800 | 0.800012 | 1.759801e-48 | -8.615850e-47 |
| Msa0105700 | Msa0766310 | 0.804422 | 2.176749e-49 | -8.615850e-47 |
| Msa0105700 | Msa0771720 | 0.825130 | 5.543805e-54 | -8.615850e-47 |
| Msa0105700 | Msa0782490 | 0.820368 | 7.117250e-53 | -8.615850e-47 |
| Msa0105700 | Msa0791910 | 0.810434 | 1.154744e-50 | -8.615850e-47 |
| Msa0105700 | Msa0792090 | 0.831475 | 1.634752e-55 | -8.615850e-47 |
| Msa0105700 | Msa0793380 | 0.810506 | 1.114096e-50 | -8.615850e-47 |
| Msa0105700 | Msa0795080 | 0.801637 | 8.197040e-49 | -8.615850e-47 |
| Msa0105700 | Msa0795920 | 0.805227 | 1.478007e-49 | -8.615850e-47 |
| Msa0105700 | Msa0801360 | 0.800349 | 1.502818e-48 | -8.615850e-47 |
| Msa0105700 | Msa0824680 | 0.803730 | 3.031695e-49 | -8.615850e-47 |
| Msa0105700 | Msa0835730 | 0.842554 | 2.409444e-58 | -8.615850e-47 |
| Msa0105700 | Msa0839830 | 0.801011 | 1.100960e-48 | -8.615850e-47 |
| Msa0105700 | Msa0843250 | 0.808133 | 3.596618e-50 | -8.615850e-47 |
| Msa0105700 | Msa0846810 | 0.808629 | 2.819992e-50 | -8.615850e-47 |
| Msa0105700 | Msa0848900 | 0.820950 | 5.232491e-53 | -8.615850e-47 |
| Msa0105700 | Msa0855430 | 0.813205 | 2.880021e-51 | -8.615850e-47 |
| Msa0105700 | Msa0860410 | 0.821284 | 4.382172e-53 | -8.615850e-47 |
| Msa0105700 | Msa0863870 | 0.803674 | 3.114342e-49 | -8.615850e-47 |
| Msa0105700 | Msa0869120 | 0.826431 | 2.723714e-54 | -8.615850e-47 |
| Msa0105700 | Msa0870150 | 0.816951 | 4.243862e-52 | -8.615850e-47 |
| Msa0105700 | Msa0874500 | 0.837274 | 5.726378e-57 | -8.615850e-47 |
| Msa0105700 | Msa0874570 | 0.801904 | 7.225712e-49 | -8.615850e-47 |
| Msa0105700 | Msa0876360 | 0.813584 | 2.377008e-51 | -8.615850e-47 |
| Msa0105700 | Msa0877410 | 0.807260 | 5.513958e-50 | -8.615850e-47 |
| Msa0105700 | Msa0878880 | 0.820523 | 6.557148e-53 | -8.615850e-47 |
| Msa0105700 | Msa0893810 | 0.802747 | 4.844719e-49 | -8.615850e-47 |
| Msa0105700 | Msa0899230 | 0.807801 | 4.233030e-50 | -8.615850e-47 |
| Msa0105700 | Msa0903400 | 0.814160 | 1.774836e-51 | -8.615850e-47 |
| Msa0105700 | Msa0908170 | 0.809813 | 1.571822e-50 | -8.615850e-47 |
| Msa0105700 | Msa0910980 | -0.822691 | 2.068307e-53 | -8.615850e-47 |
| Msa0105700 | Msa0927670 | 0.832395 | 9.688460e-56 | -8.615850e-47 |
| Msa0105700 | Msa0935850 | 0.857865 | 1.219806e-62 | -8.615850e-47 |
| Msa0105700 | Msa0939790 | 0.800540 | 1.373803e-48 | -8.615850e-47 |
| Msa0105700 | Msa0944550 | 0.851470 | 8.691870e-61 | -8.615850e-47 |
| Msa0105700 | Msa0947760 | 0.801247 | 9.851255e-49 | -8.615850e-47 |
| Msa0105700 | Msa0960160 | 0.818046 | 2.404699e-52 | -8.615850e-47 |
| Msa0105700 | Msa0974630 | 0.807452 | 5.019638e-50 | -8.615850e-47 |
| Msa0105700 | Msa0976250 | 0.832517 | 9.038015e-56 | -8.615850e-47 |
| Msa0105700 | Msa0978700 | 0.800947 | 1.134770e-48 | -8.615850e-47 |
| Msa0105700 | Msa0982270 | 0.873063 | 1.965161e-67 | -8.615850e-47 |
| Msa0105700 | Msa0992490 | -0.855750 | 5.115066e-62 | -8.615850e-47 |
| Msa0105700 | Msa0999040 | 0.812496 | 4.118210e-51 | -8.615850e-47 |
| Msa0105700 | Msa1012830 | 0.818838 | 1.590618e-52 | -8.615850e-47 |
| Msa0105700 | Msa1023180 | 0.831836 | 1.331532e-55 | -8.615850e-47 |
| Msa0105700 | Msa1026760 | 0.831396 | 1.709945e-55 | -8.615850e-47 |
| Msa0105700 | Msa1026790 | 0.828274 | 9.847879e-55 | -8.615850e-47 |
| Msa0105700 | Msa1039880 | 0.833971 | 3.924380e-56 | -8.615850e-47 |
| Msa0105700 | Msa1043050 | 0.829978 | 3.803512e-55 | -8.615850e-47 |
| Msa0105700 | Msa1054410 | 0.832144 | 1.117579e-55 | -8.615850e-47 |
| Msa0105700 | Msa1070850 | 0.822016 | 2.967482e-53 | -8.615850e-47 |
| Msa0105700 | Msa1072460 | -0.827695 | 1.357135e-54 | -8.615850e-47 |
| Msa0105700 | Msa1087470 | 0.812160 | 4.875820e-51 | -8.615850e-47 |
| Msa0105700 | Msa1090260 | 0.812711 | 3.695480e-51 | -8.615850e-47 |
| Msa0105700 | Msa1092090 | 0.856777 | 2.556890e-62 | -8.615850e-47 |
| Msa0105700 | Msa1095480 | 0.810920 | 9.066881e-51 | -8.615850e-47 |
| Msa0105700 | Msa1116690 | 0.809051 | 2.289937e-50 | -8.615850e-47 |
| Msa0105700 | Msa1118750 | 0.820947 | 5.238744e-53 | -8.615850e-47 |
| Msa0105700 | Msa1130110 | 0.800323 | 1.521188e-48 | -8.615850e-47 |
| Msa0105700 | Msa1142500 | 0.819722 | 1.000485e-52 | -8.615850e-47 |
| Msa0105700 | Msa1148720 | 0.816557 | 5.201384e-52 | -8.615850e-47 |
| Msa0105700 | Msa1148750 | 0.816378 | 5.704108e-52 | -8.615850e-47 |
| Msa0105700 | Msa1150710 | 0.821685 | 3.540219e-53 | -8.615850e-47 |
| Msa0105700 | Msa1151710 | 0.862987 | 3.432283e-64 | -8.615850e-47 |
| Msa0105700 | Msa1158670 | 0.844060 | 9.550449e-59 | -8.615850e-47 |
| Msa0105700 | Msa1172230 | 0.821954 | 3.068242e-53 | -8.615850e-47 |
| Msa0105700 | Msa1187520 | 0.829854 | 4.077178e-55 | -8.615850e-47 |
| Msa0105700 | Msa1199560 | 0.834744 | 2.510198e-56 | -8.615850e-47 |
| Msa0105700 | Msa1204980 | -0.801709 | 7.923246e-49 | -8.615850e-47 |
| Msa0105700 | Msa1205010 | -0.810927 | 9.036763e-51 | -8.615850e-47 |
| Msa0105700 | Msa1206020 | 0.810496 | 1.120145e-50 | -8.615850e-47 |
| Msa0105700 | Msa1212170 | 0.803704 | 3.069483e-49 | -8.615850e-47 |
| Msa0105700 | Msa1217430 | -0.806928 | 6.481835e-50 | -8.615850e-47 |
| Msa0105700 | Msa1217830 | 0.816106 | 6.559843e-52 | -8.615850e-47 |
| Msa0105700 | Msa1219430 | 0.812062 | 5.120737e-51 | -8.615850e-47 |
| Msa0105700 | Msa1224810 | 0.805437 | 1.335637e-49 | -8.615850e-47 |
| Msa0105700 | Msa1228310 | 0.820048 | 8.424749e-53 | -8.615850e-47 |
| Msa0105700 | Msa1233500 | 0.863720 | 2.035087e-64 | -8.615850e-47 |
| Msa0105700 | Msa1233890 | 0.814426 | 1.549870e-51 | -8.615850e-47 |
| Msa0105700 | Msa1252070 | 0.807393 | 5.167448e-50 | -8.615850e-47 |
| Msa0105700 | Msa1256540 | -0.801966 | 7.016881e-49 | -8.615850e-47 |
| Msa0105700 | Msa1258380 | -0.807428 | 5.079281e-50 | -8.615850e-47 |
| Msa0105700 | Msa1260130 | 0.811438 | 7.002633e-51 | -8.615850e-47 |
| Msa0105700 | Msa1262920 | 0.810076 | 1.379869e-50 | -8.615850e-47 |
| Msa0105700 | Msa1267260 | 0.838183 | 3.344844e-57 | -8.615850e-47 |
| Msa0105700 | Msa1271200 | 0.817121 | 3.886652e-52 | -8.615850e-47 |
| Msa0105700 | Msa1271210 | 0.804954 | 1.685909e-49 | -8.615850e-47 |
| Msa0105700 | Msa1275770 | 0.808476 | 3.040296e-50 | -8.615850e-47 |
| Msa0105700 | Msa1276440 | 0.834843 | 2.370603e-56 | -8.615850e-47 |
| Msa0105700 | Msa1279210 | 0.823628 | 1.250496e-53 | -8.615850e-47 |
| Msa0105700 | Msa1279650 | 0.804622 | 1.977285e-49 | -8.615850e-47 |
| Msa0105700 | Msa1282920 | 0.849094 | 4.031359e-60 | -8.615850e-47 |
| Msa0105700 | Msa1292730 | 0.823854 | 1.106953e-53 | -8.615850e-47 |
| Msa0105700 | Msa1300050 | 0.820060 | 8.371377e-53 | -8.615850e-47 |
| Msa0105700 | Msa1300350 | -0.832690 | 8.187950e-56 | -8.615850e-47 |
| Msa0105700 | Msa1302100 | 0.807938 | 3.958711e-50 | -8.615850e-47 |
| Msa0105700 | Msa1302190 | -0.815346 | 9.692504e-52 | -8.615850e-47 |
| Msa0105700 | Msa1303160 | 0.831267 | 1.839198e-55 | -8.615850e-47 |
| Msa0105700 | Msa1306750 | 0.845195 | 4.725759e-59 | -8.615850e-47 |
| Msa0105700 | Msa1307740 | 0.876839 | 1.014529e-68 | -8.615850e-47 |
| Msa0105700 | Msa1308480 | 0.804857 | 1.766193e-49 | -8.615850e-47 |
| Msa0105700 | Msa1316560 | -0.851801 | 7.006066e-61 | -8.615850e-47 |
| Msa0105700 | Msa1322190 | 0.826146 | 3.183659e-54 | -8.615850e-47 |
| Msa0105700 | Msa1328700 | 0.830790 | 2.407713e-55 | -8.615850e-47 |
| Msa0105700 | Msa1328850 | 0.801662 | 8.099157e-49 | -8.615850e-47 |
| Msa0105700 | Msa1333990 | 0.821585 | 3.734658e-53 | -8.615850e-47 |
| Msa0105700 | Msa1348600 | 0.843818 | 1.108781e-58 | -8.615850e-47 |
| Msa0105700 | Msa1348950 | 0.807838 | 4.157470e-50 | -8.615850e-47 |
| Msa0105700 | Msa1350690 | 0.804015 | 2.645762e-49 | -8.615850e-47 |
| Msa0105700 | Msa1358610 | -0.800526 | 1.383192e-48 | -8.615850e-47 |
| Msa0105700 | Msa1362880 | 0.808322 | 3.279003e-50 | -8.615850e-47 |
| Msa0105700 | Msa1369530 | 0.834116 | 3.610283e-56 | -8.615850e-47 |
| Msa0105700 | Msa1386430 | 0.813341 | 2.688085e-51 | -8.615850e-47 |
| Msa0105700 | Msa1396830 | 0.839729 | 1.331131e-57 | -8.615850e-47 |
| Msa0105700 | Msa1397970 | 0.807175 | 5.745853e-50 | -8.615850e-47 |
| Msa0105700 | Msa1404670 | 0.805603 | 1.232587e-49 | -8.615850e-47 |
| Msa0105700 | Msa1408790 | 0.807407 | 5.132668e-50 | -8.615850e-47 |
| Msa0105700 | Msa1427830 | 0.830877 | 2.293236e-55 | -8.615850e-47 |
| Msa0105700 | Msa1436040 | 0.810459 | 1.140731e-50 | -8.615850e-47 |
| Msa0105700 | Msa1440000 | 0.801523 | 8.648564e-49 | -8.615850e-47 |
| Msa0105700 | Msa1440600 | 0.816844 | 4.485180e-52 | -8.615850e-47 |
| Msa0105700 | Msa1440610 | 0.800357 | 1.496698e-48 | -8.615850e-47 |
| Msa0105700 | Msa1441190 | 0.822271 | 2.589530e-53 | -8.615850e-47 |
| Msa0105700 | Msa1444250 | -0.811559 | 6.589542e-51 | -8.615850e-47 |
| Msa0105700 | Msa1444740 | 0.845142 | 4.883940e-59 | -8.615850e-47 |
| Msa0105700 | Msa1448630 | 0.820013 | 8.582341e-53 | -8.615850e-47 |
| Msa0105700 | Msa1451620 | -0.802656 | 5.058643e-49 | -8.615850e-47 |
| Msa0105700 | Msa1452470 | 0.802398 | 5.716521e-49 | -8.615850e-47 |
| Msa0105700 | Msa1454110 | 0.828423 | 9.067793e-55 | -8.615850e-47 |
| Msa0105700 | Msa1455390 | 0.806730 | 7.136590e-50 | -8.615850e-47 |
| Msa0105700 | Msa1455490 | 0.803640 | 3.165301e-49 | -8.615850e-47 |
| Msa0105700 | Msa1461250 | -0.807412 | 5.118482e-50 | -8.615850e-47 |
| Msa0105700 | Msa1465960 | 0.820153 | 7.970961e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0105700 | MtrunA17_Chr1g0161051 | 96.651 | 209 | 7 | 0 | 1 | 209 | 1 | 209 | 1.44e-152 | 421 |
| Msa0105700 | MtrunA17_Chr1g0161061 | 61.463 | 205 | 67 | 1 | 1 | 205 | 1 | 193 | 7.89e-90 | 262 |
| Msa0105700 | MtrunA17_Chr1g0186321 | 49.708 | 171 | 86 | 0 | 30 | 200 | 59 | 229 | 9.78e-58 | 182 |
| Msa0105700 | MtrunA17_Chr7g0274451 | 48.538 | 171 | 88 | 0 | 30 | 200 | 61 | 231 | 1.72e-55 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0105700 | AT1G70680.1 | 63.187 | 182 | 67 | 0 | 24 | 205 | 9 | 190 | 8.02e-82 | 242 |
| Msa0105700 | AT1G70670.1 | 59.890 | 182 | 73 | 0 | 26 | 207 | 10 | 191 | 1.50e-79 | 236 |
| Msa0105700 | AT1G23240.3 | 57.485 | 167 | 71 | 0 | 33 | 199 | 2 | 168 | 2.85e-69 | 210 |
| Msa0105700 | AT1G23240.1 | 57.485 | 167 | 71 | 0 | 33 | 199 | 28 | 194 | 3.79e-69 | 210 |
| Msa0105700 | AT1G23240.4 | 57.485 | 167 | 71 | 0 | 33 | 199 | 37 | 203 | 4.73e-69 | 210 |
| Msa0105700 | AT1G70680.2 | 62.500 | 152 | 57 | 0 | 54 | 205 | 5 | 156 | 3.27e-64 | 196 |
| Msa0105700 | AT4G26740.1 | 45.604 | 182 | 95 | 1 | 23 | 200 | 51 | 232 | 5.53e-55 | 176 |
| Msa0105700 | AT5G55240.1 | 45.455 | 187 | 98 | 1 | 22 | 204 | 49 | 235 | 1.02e-54 | 175 |
| Msa0105700 | AT2G33380.1 | 45.562 | 169 | 92 | 0 | 33 | 201 | 60 | 228 | 6.02e-52 | 167 |
| Msa0105700 | AT1G23240.2 | 60.000 | 125 | 50 | 0 | 35 | 159 | 39 | 163 | 6.65e-52 | 165 |
| Msa0105700 | AT1G23250.2 | 48.252 | 143 | 71 | 2 | 57 | 199 | 20 | 159 | 1.04e-40 | 137 |
| Msa0105700 | AT1G23250.1 | 48.252 | 143 | 71 | 2 | 57 | 199 | 50 | 189 | 5.26e-40 | 136 |
| Msa0105700 | AT2G33380.2 | 38.462 | 169 | 62 | 2 | 33 | 201 | 60 | 186 | 1.15e-37 | 129 |
| Msa0105700 | AT5G29560.1 | 48.148 | 108 | 56 | 0 | 33 | 140 | 63 | 170 | 3.02e-32 | 115 |
Find 54 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAACACTTATAAGTTAATT+TGG | 0.174035 | 1_3:-14302305 | Msa0105700:five_prime_UTR |
| AGACTATAGGTGTTGGAATT+TGG | 0.178403 | 1_3:+14302361 | None:intergenic |
| TCCTAATTCGGTTGGTAATT+AGG | 0.198294 | 1_3:-14299223 | Msa0105700:exon |
| ACAACAGCAATGCGTGAAAT+TGG | 0.210121 | 1_3:-14301618 | Msa0105700:intron |
| AAGCAAACCATTCTTGTCTT+TGG | 0.246204 | 1_3:+14299327 | None:intergenic |
| CTTGTTTGAATTACTGAAAA+AGG | 0.283522 | 1_3:-14299269 | Msa0105700:CDS |
| TCCTAATTACCAACCGAATT+AGG | 0.299438 | 1_3:+14299222 | None:intergenic |
| TGGATATTCTTAACTTCAAT+TGG | 0.307296 | 1_3:+14300090 | None:intergenic |
| TAGAAAACGCTTAAGCAAAA+AGG | 0.337343 | 1_3:+14302235 | None:intergenic |
| AGAATTACTTCATCCTAATT+CGG | 0.349772 | 1_3:-14299235 | Msa0105700:exon |
| TCATCATATGTTAAAGCATT+TGG | 0.356094 | 1_3:+14299844 | None:intergenic |
| CACTCCCATGTTTGCCCCGT+TGG | 0.374563 | 1_3:+14300070 | None:intergenic |
| AAGGTCACATTACTTTGTTA+TGG | 0.388771 | 1_3:+14302406 | None:intergenic |
| TTTACACAGTAATTTGATTA+CGG | 0.390532 | 1_3:-14299113 | Msa0105700:three_prime_UTR |
| AACCTTCCTTTGACATCTTT+AGG | 0.422579 | 1_3:+14299790 | None:intergenic |
| TTCTTGTTATCATATGATAC+AGG | 0.422673 | 1_3:+14302190 | None:intergenic |
| TCATATGTAGGATTTGTTGA+TGG | 0.435999 | 1_3:-14302070 | Msa0105700:intron |
| CAACAGCAATGCGTGAAATT+GGG | 0.440569 | 1_3:-14301617 | Msa0105700:intron |
| TTCTTTGACTTGAATCATGA+TGG | 0.443395 | 1_3:-14301989 | Msa0105700:CDS |
| GGGTTGGTAGCTTTGTTGAA+TGG | 0.445777 | 1_3:-14299369 | Msa0105700:CDS |
| AATATCCAACGGGGCAAACA+TGG | 0.456851 | 1_3:-14300075 | Msa0105700:CDS |
| TGAAGTTAAGAATATCCAAC+GGG | 0.458555 | 1_3:-14300085 | Msa0105700:CDS |
| GTTTGTTGCATCTAAATTTG+AGG | 0.466576 | 1_3:-14299896 | Msa0105700:CDS |
| ATGATGGTGTTATTTATCCA+TGG | 0.477891 | 1_3:-14301973 | Msa0105700:CDS |
| TATATATAGACTATAGGTGT+TGG | 0.478625 | 1_3:+14302354 | None:intergenic |
| AAACTTGCCAAAGACAAGAA+TGG | 0.495506 | 1_3:-14299334 | Msa0105700:CDS |
| TTCTATATCGACAAAGCAAA+AGG | 0.505863 | 1_3:-14299196 | Msa0105700:three_prime_UTR |
| TATCCATGGGAGACTTTCCA+AGG | 0.507683 | 1_3:-14301959 | Msa0105700:intron |
| TGTGTATATATATAGACTAT+AGG | 0.509823 | 1_3:+14302348 | None:intergenic |
| TTACTTCATCCTAATTCGGT+TGG | 0.510841 | 1_3:-14299231 | Msa0105700:exon |
| GGCAAACATGGGAGTGACAC+TGG | 0.512670 | 1_3:-14300063 | Msa0105700:CDS |
| AGGATTTGTTGATGGTATTG+AGG | 0.529818 | 1_3:-14302062 | Msa0105700:CDS |
| ACAATCCGAGGAGTTTATGA+TGG | 0.535320 | 1_3:-14299295 | Msa0105700:CDS |
| TGATGGTGTTATTTATCCAT+GGG | 0.540816 | 1_3:-14301972 | Msa0105700:CDS |
| GCAATGCGTGAAATTGGGAG+TGG | 0.555445 | 1_3:-14301612 | Msa0105700:CDS |
| ATAACAAAGTAATGTGACCT+TGG | 0.559620 | 1_3:-14302404 | Msa0105700:five_prime_UTR |
| AGCTTCCATCATAAACTCCT+CGG | 0.564407 | 1_3:+14299290 | None:intergenic |
| AGAGAGCCTAAAGATGTCAA+AGG | 0.568594 | 1_3:-14299796 | Msa0105700:CDS |
| AGCCTAAAGATGTCAAAGGA+AGG | 0.598867 | 1_3:-14299792 | Msa0105700:intron |
| CAATGCGTGAAATTGGGAGT+GGG | 0.601313 | 1_3:-14301611 | Msa0105700:CDS |
| ATACCTTGGAAAGTCTCCCA+TGG | 0.606392 | 1_3:+14301956 | None:intergenic |
| ATTTGGAAAGCGTAGCGTGA+AGG | 0.611394 | 1_3:+14302378 | None:intergenic |
| ACTGGAGCATATGATTCTGA+AGG | 0.615429 | 1_3:-14300045 | Msa0105700:CDS |
| ATATCCAACGGGGCAAACAT+GGG | 0.618740 | 1_3:-14300074 | Msa0105700:CDS |
| CAGGGCGAGTTGTCTGACTG+AGG | 0.618929 | 1_3:+14301547 | None:intergenic |
| GCGTAGCGTGAAGGATGCCA+AGG | 0.620741 | 1_3:+14302387 | None:intergenic |
| TTGAAGTTAAGAATATCCAA+CGG | 0.624281 | 1_3:-14300086 | Msa0105700:CDS |
| GATAACAAGAAACTAGAGGA+AGG | 0.624914 | 1_3:-14302178 | Msa0105700:intron |
| AGGGCGAGTTGTCTGACTGA+GGG | 0.633873 | 1_3:+14301548 | None:intergenic |
| GAGCATATGATTCTGAAGGA+AGG | 0.661835 | 1_3:-14300041 | Msa0105700:intron |
| ATATGATAACAAGAAACTAG+AGG | 0.670209 | 1_3:-14302182 | Msa0105700:CDS |
| CTTCAGAAAGAAACAATCCG+AGG | 0.674979 | 1_3:-14299307 | Msa0105700:CDS |
| AATGCGTGAAATTGGGAGTG+GGG | 0.694422 | 1_3:-14301610 | Msa0105700:CDS |
| GAAGTTAAGAATATCCAACG+GGG | 0.810368 | 1_3:-14300084 | Msa0105700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAAAATAATAATATTT+TGG | - | chr1_3:14300927-14300946 | Msa0105700:intron | 0.0% |
| !! | AAAGATTATATCTTATAATT+TGG | - | chr1_3:14300772-14300791 | Msa0105700:intron | 10.0% |
| !! | GTATTAAAGAAAAAAATTAT+AGG | + | chr1_3:14301565-14301584 | None:intergenic | 10.0% |
| !! | TTAAATTTCAATTCATATGT+AGG | - | chr1_3:14299471-14299490 | Msa0105700:intron | 15.0% |
| !! | GTAAAAAAAAAAAAATACCT+TGG | + | chr1_3:14299614-14299633 | None:intergenic | 15.0% |
| !!! | AATAACACTTAAATTTTGTA+AGG | - | chr1_3:14299863-14299882 | Msa0105700:CDS | 15.0% |
| !!! | TTTTTTTTTTCTTCTTGAAT+TGG | - | chr1_3:14300104-14300123 | Msa0105700:CDS | 15.0% |
| !! | AATATATAGACCAAATATAT+TGG | - | chr1_3:14300504-14300523 | Msa0105700:intron | 15.0% |
| !! | TATTGAATAACCAATATATT+TGG | + | chr1_3:14300517-14300536 | None:intergenic | 15.0% |
| !!! | TTCTCTTTTAAAATACTTTT+GGG | + | chr1_3:14301056-14301075 | None:intergenic | 15.0% |
| !!! | ATTCTCTTTTAAAATACTTT+TGG | + | chr1_3:14301057-14301076 | None:intergenic | 15.0% |
| !! | TAAACAATTAATTGTGTATA+TGG | - | chr1_3:14301849-14301868 | Msa0105700:intron | 15.0% |
| !! | TTTCAAATTATTAGTTGTTT+CGG | - | chr1_3:14302048-14302067 | Msa0105700:CDS | 15.0% |
| !! | TGTGTATATATATAGACTAT+AGG | + | chr1_3:14299208-14299227 | None:intergenic | 20.0% |
| !! | AGTTATTATGCTTCATAATT+AGG | - | chr1_3:14299712-14299731 | Msa0105700:intron | 20.0% |
| !! | TTCAATTAGACATTGAATTT+GGG | + | chr1_3:14299754-14299773 | None:intergenic | 20.0% |
| !! | ACTTGAAAAGATTAATACAT+TGG | - | chr1_3:14299840-14299859 | Msa0105700:CDS | 20.0% |
| !!! | AAATTTTGTAAGGAGAAAAA+AGG | - | chr1_3:14299873-14299892 | Msa0105700:CDS | 20.0% |
| !!! | ACATCTTATAATTTTCTTCT+CGG | - | chr1_3:14300047-14300066 | Msa0105700:CDS | 20.0% |
| !!! | AGCAATTTTGATATTTTTTC+TGG | - | chr1_3:14300263-14300282 | Msa0105700:intron | 20.0% |
| !!! | AATGTGAAACTTTAATTTGT+AGG | - | chr1_3:14300310-14300329 | Msa0105700:intron | 20.0% |
| !!! | ATATTTTGGTCTCAAAATTT+TGG | - | chr1_3:14300941-14300960 | Msa0105700:intron | 20.0% |
| !!! | TTCATAAGTCAAGTTTTTAT+TGG | + | chr1_3:14301267-14301286 | None:intergenic | 20.0% |
| !! | TACTTATGCTATCATTTATA+TGG | - | chr1_3:14301402-14301421 | Msa0105700:intron | 20.0% |
| !! | CATTTATTAAATGATGTATG+TGG | + | chr1_3:14301888-14301907 | None:intergenic | 20.0% |
| !! | TTTACACAGTAATTTGATTA+CGG | - | chr1_3:14302440-14302459 | Msa0105700:five_prime_UTR | 20.0% |
| ! | TATATATAGACTATAGGTGT+TGG | + | chr1_3:14299202-14299221 | None:intergenic | 25.0% |
| !!! | AACTTATAAGTGTTGCTTTT+TGG | + | chr1_3:14299244-14299263 | None:intergenic | 25.0% |
| ! | GCAACACTTATAAGTTAATT+TGG | - | chr1_3:14299248-14299267 | Msa0105700:CDS | 25.0% |
| !!! | AAGTGCTTTTTAGTAGTATT+TGG | + | chr1_3:14299274-14299293 | None:intergenic | 25.0% |
| !! | TTCTTGTTATCATATGATAC+AGG | + | chr1_3:14299366-14299385 | None:intergenic | 25.0% |
| ! | ATATGATAACAAGAAACTAG+AGG | - | chr1_3:14299371-14299390 | Msa0105700:CDS | 25.0% |
| !!! | AACATTTTCATGATTTGGAA+TGG | + | chr1_3:14299526-14299545 | None:intergenic | 25.0% |
| !! | TGAAGAACATTTTCATGATT+TGG | + | chr1_3:14299531-14299550 | None:intergenic | 25.0% |
| ! | ATTACTTGAGCTAAACTATT+TGG | + | chr1_3:14299665-14299684 | None:intergenic | 25.0% |
| ! | TATGAAGCATAATAACTACT+TGG | + | chr1_3:14299709-14299728 | None:intergenic | 25.0% |
| ! | GTTCAATTAGACATTGAATT+TGG | + | chr1_3:14299755-14299774 | None:intergenic | 25.0% |
| ! | TCTTAACATGTGAATTGTTA+TGG | + | chr1_3:14299818-14299837 | None:intergenic | 25.0% |
| ! | AGAAAAAAGGAATTTGATAG+TGG | - | chr1_3:14299886-14299905 | Msa0105700:CDS | 25.0% |
| ! | CATAAAGAGATTTACTTACA+GGG | + | chr1_3:14300027-14300046 | None:intergenic | 25.0% |
| ! | TCATAAAGAGATTTACTTAC+AGG | + | chr1_3:14300028-14300047 | None:intergenic | 25.0% |
| !! | TTTTTCTTCTTGAATTGGAT+AGG | - | chr1_3:14300109-14300128 | Msa0105700:CDS | 25.0% |
| !!! | TCATCGAATCAATCTTTTTT+TGG | + | chr1_3:14300633-14300652 | None:intergenic | 25.0% |
| ! | ACTCAAAAAAGATATTTGAG+CGG | - | chr1_3:14300652-14300671 | Msa0105700:intron | 25.0% |
| !! | CTCTTTTACCTCTAATTTAT+AGG | + | chr1_3:14300864-14300883 | None:intergenic | 25.0% |
| ! | AAGTAATGTTCGTTTAAAAG+AGG | + | chr1_3:14301208-14301227 | None:intergenic | 25.0% |
| ! | ATTAATGTTATACGACCTTA+TGG | + | chr1_3:14301235-14301254 | None:intergenic | 25.0% |
| !!! | GTCAAGTTTTTATTGGTTAA+GGG | + | chr1_3:14301260-14301279 | None:intergenic | 25.0% |
| !!! | AGTCAAGTTTTTATTGGTTA+AGG | + | chr1_3:14301261-14301280 | None:intergenic | 25.0% |
| ! | TTAACTTCAATTGGAAAAAG+TGG | + | chr1_3:14301457-14301476 | None:intergenic | 25.0% |
| ! | TGGATATTCTTAACTTCAAT+TGG | + | chr1_3:14301466-14301485 | None:intergenic | 25.0% |
| ! | TTGAAGTTAAGAATATCCAA+CGG | - | chr1_3:14301467-14301486 | Msa0105700:intron | 25.0% |
| !! | TCATCATATGTTAAAGCATT+TGG | + | chr1_3:14301712-14301731 | None:intergenic | 25.0% |
| ! | TAATTAATACTCGTATATGC+AGG | - | chr1_3:14302163-14302182 | Msa0105700:intron | 25.0% |
| ! | AATTAATACTCGTATATGCA+GGG | - | chr1_3:14302164-14302183 | Msa0105700:intron | 25.0% |
| ! | CTTGTTTGAATTACTGAAAA+AGG | - | chr1_3:14302284-14302303 | Msa0105700:five_prime_UTR | 25.0% |
| ! | AGAATTACTTCATCCTAATT+CGG | - | chr1_3:14302318-14302337 | Msa0105700:five_prime_UTR | 25.0% |
| AAGGTCACATTACTTTGTTA+TGG | + | chr1_3:14299150-14299169 | None:intergenic | 30.0% | |
| ATAACAAAGTAATGTGACCT+TGG | - | chr1_3:14299149-14299168 | Msa0105700:three_prime_UTR | 30.0% | |
| TAGAAAACGCTTAAGCAAAA+AGG | + | chr1_3:14299321-14299340 | None:intergenic | 30.0% | |
| ! | AAGCGTTTTCTACACTAATA+TGG | - | chr1_3:14299329-14299348 | Msa0105700:CDS | 30.0% |
| !! | TCATATGTAGGATTTGTTGA+TGG | - | chr1_3:14299483-14299502 | Msa0105700:intron | 30.0% |
| !! | TTCTTTGACTTGAATCATGA+TGG | - | chr1_3:14299564-14299583 | Msa0105700:intron | 30.0% |
| !! | ATGATGGTGTTATTTATCCA+TGG | - | chr1_3:14299580-14299599 | Msa0105700:intron | 30.0% |
| !! | TGATGGTGTTATTTATCCAT+GGG | - | chr1_3:14299581-14299600 | Msa0105700:intron | 30.0% |
| TATGCTTCATAATTAGGTCA+AGG | - | chr1_3:14299718-14299737 | Msa0105700:intron | 30.0% | |
| TTCATAATTAGGTCAAGGTT+AGG | - | chr1_3:14299723-14299742 | Msa0105700:intron | 30.0% | |
| !!! | TGGTTGAAACTGAAGTTTTT+TGG | + | chr1_3:14300613-14300632 | None:intergenic | 30.0% |
| TATTTACATAAGCGTCTTAG+TGG | + | chr1_3:14300907-14300926 | None:intergenic | 30.0% | |
| ! | TTTTGGTCTCAAAATTTTGG+AGG | - | chr1_3:14300944-14300963 | Msa0105700:intron | 30.0% |
| !! | GTTTTAGTAACCTTAGTCAT+GGG | + | chr1_3:14301083-14301102 | None:intergenic | 30.0% |
| ! | TTGTAGATCTAAAACTCCTA+GGG | + | chr1_3:14301105-14301124 | None:intergenic | 30.0% |
| ! | TTTGTAGATCTAAAACTCCT+AGG | + | chr1_3:14301106-14301125 | None:intergenic | 30.0% |
| !! | GAACATTACTTTTGTCCATA+AGG | - | chr1_3:14301217-14301236 | Msa0105700:intron | 30.0% |
| ! | TTATATGGTTCTTGTTGTGT+AGG | - | chr1_3:14301417-14301436 | Msa0105700:intron | 30.0% |
| ! | TATATGGTTCTTGTTGTGTA+GGG | - | chr1_3:14301418-14301437 | Msa0105700:intron | 30.0% |
| TGAAGTTAAGAATATCCAAC+GGG | - | chr1_3:14301468-14301487 | Msa0105700:intron | 30.0% | |
| ! | GTTTGTTGCATCTAAATTTG+AGG | - | chr1_3:14301657-14301676 | Msa0105700:intron | 30.0% |
| TTCAGTGTAATTACAAGTGT+CGG | + | chr1_3:14302014-14302033 | None:intergenic | 30.0% | |
| ! | CAAATTATTAGTTGTTTCGG+CGG | - | chr1_3:14302051-14302070 | Msa0105700:CDS | 30.0% |
| ! | AAATTATTAGTTGTTTCGGC+GGG | - | chr1_3:14302052-14302071 | Msa0105700:CDS | 30.0% |
| TTCTATATCGACAAAGCAAA+AGG | - | chr1_3:14302357-14302376 | Msa0105700:five_prime_UTR | 30.0% | |
| !! | AGACTATAGGTGTTGGAATT+TGG | + | chr1_3:14299195-14299214 | None:intergenic | 35.0% |
| GATAACAAGAAACTAGAGGA+AGG | - | chr1_3:14299375-14299394 | Msa0105700:intron | 35.0% | |
| !! | AGGATTTGTTGATGGTATTG+AGG | - | chr1_3:14299491-14299510 | Msa0105700:intron | 35.0% |
| TGAGCTAAACTATTTGGTCA+TGG | + | chr1_3:14299659-14299678 | None:intergenic | 35.0% | |
| !!! | AGCTGCTATTTTCATCAATG+TGG | - | chr1_3:14299982-14300001 | Msa0105700:intron | 35.0% |
| TCTGGTTGAACTATGACTTA+TGG | - | chr1_3:14300281-14300300 | Msa0105700:intron | 35.0% | |
| AAGAGAGTCTTGAGGATATA+TGG | - | chr1_3:14300879-14300898 | Msa0105700:intron | 35.0% | |
| !!! | GAGACATAGCTGGTTTTTAA+AGG | + | chr1_3:14300996-14301015 | None:intergenic | 35.0% |
| AATATACTCAGAGACATAGC+TGG | + | chr1_3:14301006-14301025 | None:intergenic | 35.0% | |
| !! | GGTTTTAGTAACCTTAGTCA+TGG | + | chr1_3:14301084-14301103 | None:intergenic | 35.0% |
| ACTAAGGTTACTAAAACCCT+AGG | - | chr1_3:14301086-14301105 | Msa0105700:intron | 35.0% | |
| CAATTGGAAAAAGTGGAGAT+GGG | + | chr1_3:14301450-14301469 | None:intergenic | 35.0% | |
| TCAATTGGAAAAAGTGGAGA+TGG | + | chr1_3:14301451-14301470 | None:intergenic | 35.0% | |
| GAAGTTAAGAATATCCAACG+GGG | - | chr1_3:14301469-14301488 | Msa0105700:intron | 35.0% | |
| AACCTTCCTTTGACATCTTT+AGG | + | chr1_3:14301766-14301785 | None:intergenic | 35.0% | |
| AAACTTGCCAAAGACAAGAA+TGG | - | chr1_3:14302219-14302238 | Msa0105700:exon | 35.0% | |
| AAGCAAACCATTCTTGTCTT+TGG | + | chr1_3:14302229-14302248 | None:intergenic | 35.0% | |
| TTACTTCATCCTAATTCGGT+TGG | - | chr1_3:14302322-14302341 | Msa0105700:five_prime_UTR | 35.0% | |
| !! | TCCTAATTCGGTTGGTAATT+AGG | - | chr1_3:14302330-14302349 | Msa0105700:five_prime_UTR | 35.0% |
| TCCTAATTACCAACCGAATT+AGG | + | chr1_3:14302334-14302353 | None:intergenic | 35.0% | |
| ACAACAGCAATGCGTGAAAT+TGG | - | chr1_3:14299935-14299954 | Msa0105700:intron | 40.0% | |
| CAACAGCAATGCGTGAAATT+GGG | - | chr1_3:14299936-14299955 | Msa0105700:intron | 40.0% | |
| CAAAATTGCTAGCTCAAACG+CGG | + | chr1_3:14300253-14300272 | None:intergenic | 40.0% | |
| CATCAAGATATCCTCATTCG+TGG | + | chr1_3:14300691-14300710 | None:intergenic | 40.0% | |
| AGAGGTAAAAGAGAGTCTTG+AGG | - | chr1_3:14300871-14300890 | Msa0105700:intron | 40.0% | |
| TGAAAATAGCTCAAGAGAGC+TGG | + | chr1_3:14300971-14300990 | None:intergenic | 40.0% | |
| CCTATATGTTCAGTGAGAGT+TGG | + | chr1_3:14301329-14301348 | None:intergenic | 40.0% | |
| CCAACTCTCACTGAACATAT+AGG | - | chr1_3:14301326-14301345 | Msa0105700:intron | 40.0% | |
| ACTGGAGCATATGATTCTGA+AGG | - | chr1_3:14301508-14301527 | Msa0105700:intron | 40.0% | |
| ! | GAGCATATGATTCTGAAGGA+AGG | - | chr1_3:14301512-14301531 | Msa0105700:intron | 40.0% |
| AGAGAGCCTAAAGATGTCAA+AGG | - | chr1_3:14301757-14301776 | Msa0105700:intron | 40.0% | |
| AGCCTAAAGATGTCAAAGGA+AGG | - | chr1_3:14301761-14301780 | Msa0105700:intron | 40.0% | |
| TAGTGACCAGCTATAAAGCA+CGG | - | chr1_3:14301936-14301955 | Msa0105700:intron | 40.0% | |
| !! | GTAATTACAAGTGTCGGTGT+CGG | + | chr1_3:14302008-14302027 | None:intergenic | 40.0% |
| TCATCTATGAAGCACGGATA+CGG | + | chr1_3:14302109-14302128 | None:intergenic | 40.0% | |
| ATCCGTGCTTCATAGATGAT+CGG | - | chr1_3:14302110-14302129 | Msa0105700:intron | 40.0% | |
| TACCGATCATCTATGAAGCA+CGG | + | chr1_3:14302115-14302134 | None:intergenic | 40.0% | |
| AATACTCGTATATGCAGGGT+TGG | - | chr1_3:14302168-14302187 | Msa0105700:intron | 40.0% | |
| CTTCAGAAAGAAACAATCCG+AGG | - | chr1_3:14302246-14302265 | Msa0105700:five_prime_UTR | 40.0% | |
| ACAATCCGAGGAGTTTATGA+TGG | - | chr1_3:14302258-14302277 | Msa0105700:five_prime_UTR | 40.0% | |
| AGCTTCCATCATAAACTCCT+CGG | + | chr1_3:14302266-14302285 | None:intergenic | 40.0% | |
| ! | ATTTGGAAAGCGTAGCGTGA+AGG | + | chr1_3:14299178-14299197 | None:intergenic | 45.0% |
| TATCCATGGGAGACTTTCCA+AGG | - | chr1_3:14299594-14299613 | Msa0105700:intron | 45.0% | |
| ATACCTTGGAAAGTCTCCCA+TGG | + | chr1_3:14299600-14299619 | None:intergenic | 45.0% | |
| CAATGCGTGAAATTGGGAGT+GGG | - | chr1_3:14299942-14299961 | Msa0105700:intron | 45.0% | |
| AATGCGTGAAATTGGGAGTG+GGG | - | chr1_3:14299943-14299962 | Msa0105700:intron | 45.0% | |
| AAGTGCAAATGCCACGAATG+AGG | - | chr1_3:14300677-14300696 | Msa0105700:intron | 45.0% | |
| AGTTATGTCACCTTGCGTGT+AGG | - | chr1_3:14300832-14300851 | Msa0105700:intron | 45.0% | |
| GTTATGTCACCTTGCGTGTA+GGG | - | chr1_3:14300833-14300852 | Msa0105700:intron | 45.0% | |
| GGGCGGTTCCTATAAATTAG+AGG | - | chr1_3:14300853-14300872 | Msa0105700:intron | 45.0% | |
| AGAGAATCGTCCCATGACTA+AGG | - | chr1_3:14301070-14301089 | Msa0105700:intron | 45.0% | |
| AATATCCAACGGGGCAAACA+TGG | - | chr1_3:14301478-14301497 | Msa0105700:intron | 45.0% | |
| ATATCCAACGGGGCAAACAT+GGG | - | chr1_3:14301479-14301498 | Msa0105700:intron | 45.0% | |
| TATAAAGCACGGACACTCCT+CGG | - | chr1_3:14301947-14301966 | Msa0105700:intron | 45.0% | |
| ACACGACATATGTTCGACAC+CGG | + | chr1_3:14301985-14302004 | None:intergenic | 45.0% | |
| TAGATGATCGGTACGATGCA+TGG | - | chr1_3:14302122-14302141 | Msa0105700:intron | 45.0% | |
| !! | GGGTTGGTAGCTTTGTTGAA+TGG | - | chr1_3:14302184-14302203 | Msa0105700:CDS | 45.0% |
| !!! | ATTTTTTTTTTTTTACATAA+AGG | - | chr1_3:14299618-14299637 | Msa0105700:intron | 5.0% |
| !! | AAAAAATAAAAAATATAACT+TGG | - | chr1_3:14300543-14300562 | Msa0105700:intron | 5.0% |
| !!! | TAAAAAATATATATTTTTAC+TGG | + | chr1_3:14301636-14301655 | None:intergenic | 5.0% |
| !!! | AGTAAAAATATATATTTTTT+AGG | - | chr1_3:14301635-14301654 | Msa0105700:intron | 5.0% |
| GCAATGCGTGAAATTGGGAG+TGG | - | chr1_3:14299941-14299960 | Msa0105700:intron | 50.0% | |
| GAGTGTCCGTGCTTTATAGC+TGG | + | chr1_3:14301945-14301964 | None:intergenic | 50.0% | |
| CACGACATATGTTCGACACC+GGG | + | chr1_3:14301984-14302003 | None:intergenic | 50.0% | |
| AGGGCGAGTTGTCTGACTGA+GGG | + | chr1_3:14300008-14300027 | None:intergenic | 55.0% | |
| ATGTCACCTTGCGTGTAGGG+CGG | - | chr1_3:14300836-14300855 | Msa0105700:intron | 55.0% | |
| GGCAAACATGGGAGTGACAC+TGG | - | chr1_3:14301490-14301509 | Msa0105700:intron | 55.0% | |
| ATGAAGCACGGATACGGACG+CGG | + | chr1_3:14302103-14302122 | None:intergenic | 55.0% | |
| GCGTAGCGTGAAGGATGCCA+AGG | + | chr1_3:14299169-14299188 | None:intergenic | 60.0% | |
| CAGGGCGAGTTGTCTGACTG+AGG | + | chr1_3:14300009-14300028 | None:intergenic | 60.0% | |
| TAGGAACCGCCCTACACGCA+AGG | + | chr1_3:14300845-14300864 | None:intergenic | 60.0% | |
| CACTCCCATGTTTGCCCCGT+TGG | + | chr1_3:14301486-14301505 | None:intergenic | 60.0% | |
| CGCGGACACTGGACACAACA+CGG | + | chr1_3:14302085-14302104 | None:intergenic | 60.0% | |
| GCACGGACACTCCTCGGACT+AGG | - | chr1_3:14301953-14301972 | Msa0105700:intron | 65.0% | |
| ! | TCCTCGGACTAGGCGTGTCC+CGG | - | chr1_3:14301963-14301982 | Msa0105700:CDS | 65.0% |
| ACGGATACGGACGCGGACAC+TGG | + | chr1_3:14302096-14302115 | None:intergenic | 65.0% | |
| ACCGGGACACGCCTAGTCCG+AGG | + | chr1_3:14301967-14301986 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 14299063 | 14302512 | 14299063 | ID=Msa0105700;Name=Msa0105700 |
| chr1_3 | mRNA | 14299063 | 14302512 | 14299063 | ID=Msa0105700-mRNA-1;Parent=Msa0105700;Name=Msa0105700-mRNA-1;_AED=0.30;_eAED=0.30;_QI=285|1|1|1|1|1|6|177|209 |
| chr1_3 | exon | 14299063 | 14299390 | 14299063 | ID=Msa0105700-mRNA-1:exon:5654;Parent=Msa0105700-mRNA-1 |
| chr1_3 | exon | 14299793 | 14299918 | 14299793 | ID=Msa0105700-mRNA-1:exon:5653;Parent=Msa0105700-mRNA-1 |
| chr1_3 | exon | 14300042 | 14300136 | 14300042 | ID=Msa0105700-mRNA-1:exon:5652;Parent=Msa0105700-mRNA-1 |
| chr1_3 | exon | 14301548 | 14301633 | 14301548 | ID=Msa0105700-mRNA-1:exon:5651;Parent=Msa0105700-mRNA-1 |
| chr1_3 | exon | 14301960 | 14302082 | 14301960 | ID=Msa0105700-mRNA-1:exon:5650;Parent=Msa0105700-mRNA-1 |
| chr1_3 | exon | 14302179 | 14302512 | 14302179 | ID=Msa0105700-mRNA-1:exon:5649;Parent=Msa0105700-mRNA-1 |
| chr1_3 | five_prime_UTR | 14302228 | 14302512 | 14302228 | ID=Msa0105700-mRNA-1:five_prime_utr;Parent=Msa0105700-mRNA-1 |
| chr1_3 | CDS | 14302179 | 14302227 | 14302179 | ID=Msa0105700-mRNA-1:cds;Parent=Msa0105700-mRNA-1 |
| chr1_3 | CDS | 14301960 | 14302082 | 14301960 | ID=Msa0105700-mRNA-1:cds;Parent=Msa0105700-mRNA-1 |
| chr1_3 | CDS | 14301548 | 14301633 | 14301548 | ID=Msa0105700-mRNA-1:cds;Parent=Msa0105700-mRNA-1 |
| chr1_3 | CDS | 14300042 | 14300136 | 14300042 | ID=Msa0105700-mRNA-1:cds;Parent=Msa0105700-mRNA-1 |
| chr1_3 | CDS | 14299793 | 14299918 | 14299793 | ID=Msa0105700-mRNA-1:cds;Parent=Msa0105700-mRNA-1 |
| chr1_3 | CDS | 14299240 | 14299390 | 14299240 | ID=Msa0105700-mRNA-1:cds;Parent=Msa0105700-mRNA-1 |
| chr1_3 | three_prime_UTR | 14299063 | 14299239 | 14299063 | ID=Msa0105700-mRNA-1:three_prime_utr;Parent=Msa0105700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
