AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0639150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0639150 MtrunA17_Chr4g0050561 99.520 417 2 0 1 417 1 417 0.0 851
Msa0639150 MtrunA17_Chr8g0345461 53.602 347 150 4 61 403 72 411 3.03e-120 356
Msa0639150 MtrunA17_Chr1g0200081 52.841 352 154 5 61 403 72 420 1.35e-117 350
Msa0639150 MtrunA17_Chr7g0262801 48.556 381 185 4 30 407 65 437 8.84e-115 343
Msa0639150 MtrunA17_Chr1g0182711 52.000 325 155 1 83 407 115 438 4.74e-114 341
Msa0639150 MtrunA17_Chr3g0141901 48.603 358 169 2 58 401 24 380 7.73e-112 333
Msa0639150 MtrunA17_Chr3g0145011 47.253 364 184 2 45 401 21 383 3.34e-111 332
Msa0639150 MtrunA17_Chr1g0192151 52.740 292 137 1 113 404 124 414 3.44e-106 320
Msa0639150 MtrunA17_Chr4g0014731 52.740 292 137 1 113 404 125 415 4.18e-106 320
Msa0639150 MtrunA17_Chr3g0108321 49.632 272 136 1 70 341 73 343 6.93e-89 274
Msa0639150 MtrunA17_Chr7g0217421 39.928 278 154 5 127 402 17 283 7.70e-62 205
Msa0639150 MtrunA17_Chr6g0476861 41.797 256 146 2 161 414 202 456 2.27e-61 210
Msa0639150 MtrunA17_Chr1g0180791 44.915 236 126 2 158 393 207 438 2.46e-61 212
Msa0639150 MtrunA17_Chr1g0180791 35.905 337 202 7 52 384 379 705 4.99e-61 211
Msa0639150 MtrunA17_Chr7g0264521 34.043 376 221 8 52 410 380 745 2.69e-61 212
Msa0639150 MtrunA17_Chr7g0264521 44.068 236 128 2 158 393 208 439 4.67e-60 208
Msa0639150 MtrunA17_Chr4g0052411 42.276 246 140 2 157 402 230 473 5.37e-61 209
Msa0639150 MtrunA17_Chr7g0255651 41.870 246 142 1 139 384 265 509 7.38e-61 207
Msa0639150 MtrunA17_Chr7g0255651 28.279 244 160 6 149 383 4 241 2.33e-20 93.6
Msa0639150 MtrunA17_Chr3g0143721 40.304 263 153 3 149 409 240 500 2.37e-60 208
Msa0639150 MtrunA17_Chr2g0327121 40.873 252 147 2 133 384 458 707 3.98e-60 209
Msa0639150 MtrunA17_Chr2g0327121 42.798 243 135 2 151 393 202 440 6.08e-59 205
Msa0639150 MtrunA17_Chr2g0297281 41.463 246 142 2 157 402 287 530 1.65e-59 206
Msa0639150 MtrunA17_Chr7g0248361 35.913 323 182 5 114 414 132 451 1.28e-58 202
Msa0639150 MtrunA17_Chr3g0094871 41.473 258 147 3 161 416 16 271 3.07e-58 196
Msa0639150 MtrunA17_Chr7g0260601 40.684 263 141 3 161 415 245 500 7.45e-58 201
Msa0639150 MtrunA17_Chr8g0388371 40.637 251 141 2 158 401 406 655 9.99e-57 200
Msa0639150 MtrunA17_Chr7g0255691 42.276 246 141 1 139 384 269 513 2.62e-54 189
Msa0639150 MtrunA17_Chr7g0255691 35.242 227 132 5 159 377 20 239 8.91e-32 127
Msa0639150 MtrunA17_Chr5g0429571 40.385 260 148 3 151 404 308 566 3.16e-54 192
Msa0639150 MtrunA17_Chr4g0031821 39.453 256 152 2 161 414 325 579 1.47e-53 191
Msa0639150 MtrunA17_Chr3g0104211 40.157 254 145 3 157 404 305 557 5.30e-53 189
Msa0639150 MtrunA17_Chr8g0362771 41.224 245 140 2 158 402 239 479 8.01e-53 187
Msa0639150 MtrunA17_Chr7g0255721 39.163 263 156 2 152 412 681 941 3.78e-51 184
Msa0639150 MtrunA17_Chr7g0255721 33.036 224 143 3 161 383 391 608 8.14e-32 128
Msa0639150 MtrunA17_Chr7g0255641 38.403 263 158 2 152 412 654 914 4.10e-51 184
Msa0639150 MtrunA17_Chr7g0255641 35.981 214 120 5 195 397 432 639 3.19e-30 123
Msa0639150 MtrunA17_Chr2g0331161 38.866 247 145 3 150 394 409 651 1.61e-50 182
Msa0639150 MtrunA17_Chr4g0033451 39.921 253 140 5 157 401 381 629 1.98e-50 183
Msa0639150 MtrunA17_Chr1g0158881 38.976 254 149 2 157 410 330 577 1.28e-48 176
Msa0639150 MtrunA17_Chr6g0456351 37.918 269 146 5 158 417 319 575 3.37e-48 173
Msa0639150 MtrunA17_Chr3g0135721 38.866 247 146 2 156 402 224 465 4.21e-48 174
Msa0639150 MtrunA17_Chr3g0129971 42.489 233 128 3 157 384 297 528 6.38e-48 175
Msa0639150 MtrunA17_Chr4g0004121 36.054 294 154 7 150 416 236 522 1.04e-47 171
Msa0639150 MtrunA17_Chr3g0135761 39.669 242 141 2 161 402 227 463 5.52e-47 171
Msa0639150 MtrunA17_Chr7g0255901 37.903 248 148 5 148 392 631 875 6.65e-47 172
Msa0639150 MtrunA17_Chr4g0026631 40.650 246 133 8 139 380 110 346 5.92e-46 164
Msa0639150 MtrunA17_Chr2g0316851 39.224 232 131 4 158 383 596 823 1.32e-45 169
Msa0639150 MtrunA17_Chr5g0432631 38.000 250 146 3 155 402 228 470 1.84e-45 168
Msa0639150 MtrunA17_Chr4g0043381 40.175 229 133 1 156 384 837 1061 1.91e-45 168
Msa0639150 MtrunA17_Chr4g0043381 28.509 228 131 6 185 394 580 793 4.96e-11 65.1
Msa0639150 MtrunA17_Chr2g0277831 34.962 266 164 3 122 385 502 760 1.73e-44 165
Msa0639150 MtrunA17_Chr2g0277831 37.959 245 129 5 161 392 248 482 3.25e-39 149
Msa0639150 MtrunA17_Chr2g0321241 39.167 240 133 8 145 380 121 351 7.84e-44 158
Msa0639150 MtrunA17_Chr5g0397121 37.500 240 141 5 157 393 514 747 4.42e-43 161
Msa0639150 MtrunA17_Chr4g0052271 37.344 241 143 5 154 392 117 351 4.46e-43 155
Msa0639150 MtrunA17_Chr7g0246111 37.200 250 145 6 139 384 195 436 9.66e-43 157
Msa0639150 MtrunA17_Chr3g0127401 38.889 234 132 5 155 384 80 306 4.21e-42 152
Msa0639150 MtrunA17_Chr2g0327231 43.713 167 93 1 151 317 341 506 5.58e-42 154
Msa0639150 MtrunA17_Chr2g0327231 44.211 95 49 1 151 245 148 238 2.18e-20 93.2
Msa0639150 MtrunA17_Chr1g0204031 40.260 231 129 5 157 384 558 782 1.60e-41 156
Msa0639150 MtrunA17_Chr3g0086411 35.473 296 158 6 141 408 200 490 4.96e-41 152
Msa0639150 MtrunA17_Chr3g0086411 38.889 144 83 2 244 382 7 150 1.86e-20 93.6
Msa0639150 MtrunA17_Chr5g0432641 36.290 248 153 3 163 410 198 440 5.63e-41 154
Msa0639150 MtrunA17_Chr8g0387641 36.910 233 138 5 155 384 520 746 7.70e-41 154
Msa0639150 MtrunA17_Chr1g0195741 39.224 232 131 5 157 384 939 1164 8.77e-41 155
Msa0639150 MtrunA17_Chr3g0086401 35.017 297 158 5 141 407 370 661 9.27e-41 153
Msa0639150 MtrunA17_Chr3g0086401 38.222 225 121 7 159 373 96 312 8.68e-35 136
Msa0639150 MtrunA17_Chr1g0202371 38.095 231 133 5 157 384 398 621 2.18e-40 152
Msa0639150 MtrunA17_Chr4g0038101 38.261 230 134 4 158 384 723 947 8.46e-40 152
Msa0639150 MtrunA17_Chr3g0116131 38.938 226 128 5 157 378 903 1122 1.10e-39 151
Msa0639150 MtrunA17_Chr3g0127431 38.034 234 134 5 155 384 83 309 4.41e-39 144
Msa0639150 MtrunA17_Chr1g0195731 36.638 232 137 5 157 384 935 1160 7.65e-39 149
Msa0639150 MtrunA17_Chr6g0462581 37.931 232 132 7 157 384 501 724 1.69e-38 147
Msa0639150 MtrunA17_Chr3g0135781 44.785 163 83 3 158 319 57 213 2.21e-37 135
Msa0639150 MtrunA17_Chr1g0202381 37.288 236 129 6 157 384 469 693 3.92e-37 144
Msa0639150 MtrunA17_Chr4g0047411 35.424 271 142 7 161 402 180 446 6.88e-37 142
Msa0639150 MtrunA17_Chr6g0459561 31.597 288 166 9 150 416 376 653 2.41e-36 140
Msa0639150 MtrunA17_Chr6g0459541 32.500 280 154 8 133 384 20 292 1.80e-35 134
Msa0639150 MtrunA17_Chr1g0168321 39.267 191 114 1 226 414 196 386 2.62e-35 136
Msa0639150 MtrunA17_Chr8g0357301 31.276 243 148 4 179 412 492 724 9.22e-31 125
Msa0639150 MtrunA17_Chr2g0289231 31.897 232 136 7 157 377 298 518 6.25e-30 121
Msa0639150 MtrunA17_Chr6g0459551 30.597 268 142 8 150 384 96 352 3.27e-29 118
Msa0639150 MtrunA17_Chr1g0190401 34.711 242 145 8 141 373 659 896 2.59e-28 117
Msa0639150 MtrunA17_Chr4g0062081 62.338 77 28 1 161 236 12 88 1.99e-27 104
Msa0639150 MtrunA17_Chr5g0432391 34.940 166 100 2 234 397 81 240 1.32e-21 96.3
Msa0639150 MtrunA17_Chr6g0459531 28.333 240 132 9 150 384 61 265 5.12e-20 90.1
Msa0639150 MtrunA17_Chr8g0372701 33.520 179 99 7 156 326 222 388 9.79e-15 75.9
Msa0639150 MtrunA17_Chr6g0450161 35.099 151 89 5 194 343 364 506 1.10e-14 75.9
Msa0639150 MtrunA17_Chr3g0116941 30.000 170 101 4 196 351 199 364 1.30e-13 72.4
Msa0639150 MtrunA17_Chr5g0404651 33.125 160 95 5 171 326 229 380 2.90e-13 71.2
Msa0639150 MtrunA17_Chr5g0404291 35.417 144 84 5 194 336 389 524 2.92e-13 71.6
Msa0639150 MtrunA17_Chr2g0315971 28.814 177 110 6 163 332 477 644 3.77e-13 71.2
Msa0639150 MtrunA17_Chr2g0315971 28.022 182 115 5 157 332 196 367 1.78e-11 66.2
Msa0639150 MtrunA17_Chr4g0039781 33.113 151 92 5 194 343 370 512 6.67e-13 70.5
Msa0639150 MtrunA17_Chr2g0315911 29.609 179 105 7 163 332 210 376 1.08e-12 69.3
Msa0639150 MtrunA17_Chr2g0315921 32.468 154 90 5 183 332 236 379 3.81e-12 67.8
Msa0639150 MtrunA17_Chr6g0466811 29.016 193 113 7 163 341 215 397 2.36e-11 65.5
Msa0639150 MtrunA17_Chr2g0315991 30.000 160 96 6 179 332 220 369 2.76e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0639150 AT5G19990.1 94.033 419 23 1 1 417 1 419 0.0 798
Msa0639150 AT5G19990.3 94.033 419 23 1 1 417 1 419 0.0 798
Msa0639150 AT5G20000.1 93.079 419 27 1 1 417 1 419 0.0 790
Msa0639150 AT5G19990.2 98.864 352 4 0 66 417 10 361 0.0 710
Msa0639150 AT1G53750.1 53.602 347 150 4 61 403 72 411 6.33e-120 355
Msa0639150 AT2G20140.1 47.090 378 195 2 30 407 63 435 2.45e-114 342
Msa0639150 AT4G29040.1 47.090 378 195 2 30 407 63 435 5.17e-114 341
Msa0639150 AT5G43010.1 49.441 358 166 2 58 401 24 380 7.90e-114 339
Msa0639150 AT1G53780.1 52.738 347 153 3 61 403 244 583 2.70e-113 344
Msa0639150 AT1G53780.4 52.738 347 153 3 61 403 244 583 2.70e-113 344
Msa0639150 AT1G53780.3 52.738 347 153 3 61 403 243 582 2.74e-113 344
Msa0639150 AT1G53780.2 52.738 347 153 3 61 403 265 604 6.46e-113 344
Msa0639150 AT1G45000.1 49.296 355 165 2 61 401 27 380 2.31e-112 335
Msa0639150 AT1G09100.1 52.740 292 137 1 113 404 124 414 2.80e-106 320
Msa0639150 AT3G05530.1 52.740 292 137 1 113 404 125 415 1.30e-105 319
Msa0639150 AT5G58290.1 44.444 378 196 3 31 407 39 403 7.42e-105 317
Msa0639150 AT1G45000.2 47.036 253 119 2 61 299 27 278 1.47e-71 228
Msa0639150 AT1G06430.1 42.683 246 139 2 157 402 218 461 1.02e-62 214
Msa0639150 AT1G06430.3 42.683 246 139 2 157 402 218 461 1.02e-62 214
Msa0639150 AT1G06430.2 42.683 246 139 2 157 402 218 461 1.02e-62 214
Msa0639150 AT2G30950.1 42.276 246 140 2 157 402 225 468 5.71e-62 213
Msa0639150 AT2G30950.2 42.276 246 140 2 157 402 225 468 5.71e-62 213
Msa0639150 AT2G30950.3 42.276 246 140 2 157 402 225 468 5.71e-62 213
Msa0639150 AT2G30950.4 42.276 246 140 2 157 402 229 472 7.29e-62 212
Msa0639150 AT3G09840.1 43.621 243 133 2 151 393 199 437 1.67e-61 213
Msa0639150 AT3G09840.1 42.128 235 136 0 150 384 471 705 1.40e-59 207
Msa0639150 AT5G03340.1 43.210 243 134 2 151 393 199 437 1.35e-60 210
Msa0639150 AT5G03340.1 42.128 235 135 1 150 384 471 704 1.44e-60 210
Msa0639150 AT3G53230.1 36.012 336 203 6 52 384 379 705 1.89e-60 210
Msa0639150 AT3G53230.1 41.870 246 139 2 151 396 200 441 3.29e-59 207
Msa0639150 AT5G42270.1 39.924 263 154 3 149 409 238 498 2.24e-60 208
Msa0639150 AT1G50250.1 39.544 263 155 3 149 409 250 510 2.26e-59 206
Msa0639150 AT5G15250.1 39.837 246 146 2 157 402 222 465 3.25e-57 199
Msa0639150 AT2G03670.1 41.463 246 144 0 139 384 266 511 1.53e-56 196
Msa0639150 AT2G03670.1 36.214 243 147 3 161 397 24 264 3.12e-44 162
Msa0639150 AT5G58870.1 40.541 259 151 2 157 413 327 584 2.38e-55 196
Msa0639150 AT4G23940.1 39.768 259 148 2 161 412 432 689 4.09e-55 196
Msa0639150 AT1G07510.1 40.467 257 150 2 161 415 329 584 4.55e-55 195
Msa0639150 AT5G15250.2 37.175 269 144 4 157 402 222 488 6.34e-55 190
Msa0639150 AT3G56690.1 41.870 246 141 1 139 384 704 947 6.56e-55 196
Msa0639150 AT3G56690.1 38.393 224 132 3 161 383 387 605 4.50e-42 159
Msa0639150 AT3G47060.1 39.382 259 154 2 157 413 323 580 2.72e-54 193
Msa0639150 AT2G29080.1 42.412 257 144 3 161 415 324 578 6.99e-52 186
Msa0639150 AT3G16290.1 38.800 250 147 3 150 397 401 646 3.37e-50 182
Msa0639150 AT1G05910.1 39.044 251 141 4 155 398 377 622 4.31e-50 182
Msa0639150 AT5G64580.1 40.329 243 137 4 157 393 314 554 8.34e-50 181
Msa0639150 AT2G26140.1 40.081 247 143 2 156 402 224 465 2.79e-49 178
Msa0639150 AT3G02450.1 40.079 252 144 3 152 401 327 573 5.05e-49 176
Msa0639150 AT5G53170.1 38.976 254 149 2 157 410 360 607 1.46e-48 177
Msa0639150 AT2G34560.1 37.594 266 153 6 154 411 98 358 2.40e-47 167
Msa0639150 AT2G34560.2 37.594 266 153 6 154 411 107 367 3.10e-47 166
Msa0639150 AT1G03000.1 39.749 239 137 6 152 387 651 885 4.22e-47 173
Msa0639150 AT1G80350.1 36.395 294 153 8 150 416 230 516 5.46e-47 169
Msa0639150 AT5G08470.3 41.176 238 129 4 158 393 834 1062 1.11e-45 169
Msa0639150 AT5G08470.1 41.176 238 129 4 158 393 843 1071 1.11e-45 169
Msa0639150 AT2G03670.2 36.585 246 142 4 161 397 24 264 2.08e-45 162
Msa0639150 AT2G03670.2 38.854 157 96 0 139 295 266 422 5.61e-29 117
Msa0639150 AT3G15120.1 39.224 232 129 4 158 382 718 944 2.24e-44 166
Msa0639150 AT3G15120.2 39.224 232 129 4 158 382 728 954 2.59e-44 166
Msa0639150 AT2G27600.1 39.837 246 135 8 139 380 112 348 3.65e-44 159
Msa0639150 AT2G45500.4 38.618 246 137 8 144 384 68 304 2.41e-43 155
Msa0639150 AT2G45500.3 38.618 246 137 8 144 384 68 304 2.41e-43 155
Msa0639150 AT3G01610.2 39.485 233 135 3 153 384 522 749 7.87e-43 160
Msa0639150 AT3G01610.2 35.223 247 144 3 148 383 222 463 6.53e-39 149
Msa0639150 AT3G01610.1 39.485 233 135 3 153 384 522 749 8.00e-43 160
Msa0639150 AT3G01610.1 35.223 247 144 3 148 383 222 463 7.10e-39 149
Msa0639150 AT2G45500.2 38.618 246 137 8 144 384 201 437 3.64e-42 155
Msa0639150 AT2G45500.1 38.189 254 143 8 136 384 197 441 4.47e-42 155
Msa0639150 AT2G45500.5 38.189 254 143 8 136 384 203 447 4.91e-42 155
Msa0639150 AT3G19740.1 39.827 231 129 5 158 384 703 927 1.51e-41 157
Msa0639150 AT4G02480.1 37.931 232 134 5 157 384 961 1186 4.89e-41 156
Msa0639150 AT1G50140.3 39.394 231 130 5 158 384 713 937 1.09e-40 155
Msa0639150 AT1G50140.1 39.394 231 130 5 158 384 713 937 1.09e-40 155
Msa0639150 AT1G50140.4 39.394 231 130 5 158 384 713 937 1.09e-40 155
Msa0639150 AT1G50140.2 39.394 231 130 5 158 384 691 915 1.17e-40 154
Msa0639150 AT1G50140.5 39.394 231 130 5 158 384 691 915 1.17e-40 154
Msa0639150 AT4G28000.3 37.229 231 135 6 157 384 518 741 5.75e-40 152
Msa0639150 AT4G28000.2 37.229 231 135 6 157 384 518 741 7.45e-40 152
Msa0639150 AT4G28000.1 37.229 231 135 6 157 384 516 739 7.85e-40 152
Msa0639150 AT5G53540.1 35.206 267 150 7 155 405 83 342 8.46e-40 147
Msa0639150 AT4G24860.1 36.910 233 139 4 155 384 816 1043 1.21e-39 152
Msa0639150 AT4G24860.3 36.910 233 139 4 155 384 814 1041 1.29e-39 152
Msa0639150 AT4G24860.4 36.910 233 139 4 155 384 789 1016 1.76e-39 151
Msa0639150 AT4G24860.2 36.910 233 139 4 155 384 812 1039 1.78e-39 151
Msa0639150 AT1G02890.1 37.500 232 135 5 157 384 942 1167 2.10e-39 151
Msa0639150 AT1G64110.1 36.797 231 137 5 157 384 514 738 8.73e-39 149
Msa0639150 AT1G64110.5 36.797 231 137 5 157 384 517 741 8.95e-39 149
Msa0639150 AT1G64110.3 36.797 231 137 5 157 384 517 741 8.95e-39 149
Msa0639150 AT1G64110.2 36.797 231 137 5 157 384 519 743 9.25e-39 149
Msa0639150 AT1G64110.4 36.797 231 137 5 157 384 519 743 9.25e-39 149
Msa0639150 AT4G27680.1 36.752 234 137 5 155 384 80 306 1.41e-38 144
Msa0639150 AT4G04910.1 35.556 270 141 7 161 401 217 482 1.98e-37 144
Msa0639150 AT5G52882.1 36.364 231 137 6 157 384 515 738 2.79e-37 144
Msa0639150 AT3G27120.1 32.168 286 167 9 150 416 394 671 1.56e-36 142
Msa0639150 AT1G79560.2 34.234 222 131 3 181 393 514 729 5.09e-33 132
Msa0639150 AT1G79560.1 34.234 222 131 3 181 393 514 729 5.48e-33 132
Msa0639150 AT1G79560.3 34.234 222 131 3 181 393 514 729 6.22e-33 132
Msa0639150 AT1G62130.2 33.195 241 135 7 157 393 744 962 5.44e-30 123
Msa0639150 AT1G62130.1 33.195 241 135 7 157 393 751 969 6.33e-30 123
Msa0639150 AT4G04180.2 33.761 234 129 7 157 377 312 532 1.00e-29 121
Msa0639150 AT4G04180.1 33.761 234 129 7 157 377 317 537 1.05e-29 121
Msa0639150 AT3G04340.1 32.103 271 161 9 120 373 736 1000 1.21e-25 110
Msa0639150 AT5G08470.2 40.268 149 85 1 158 306 843 987 3.08e-25 108
Msa0639150 AT1G02890.2 31.466 232 121 6 157 384 942 1139 6.99e-24 105
Msa0639150 AT5G17760.1 32.022 178 106 6 156 326 216 385 1.90e-14 75.5
Msa0639150 AT4G24710.3 29.375 160 97 3 196 341 217 374 4.80e-14 74.3
Msa0639150 AT4G24710.1 29.375 160 97 3 196 341 205 362 4.83e-14 73.9
Msa0639150 AT2G18193.1 30.857 175 109 4 156 326 206 372 1.58e-13 72.8
Msa0639150 AT4G24710.4 30.159 126 74 2 196 307 217 342 1.05e-12 69.3
Msa0639150 AT4G24710.2 30.159 126 74 2 196 307 217 342 1.05e-12 69.3
Msa0639150 AT5G16930.1 32.450 151 93 5 194 343 399 541 1.15e-12 70.1
Msa0639150 AT2G18330.1 34.028 144 86 5 194 336 386 521 1.38e-12 70.1
Msa0639150 AT4G36580.1 33.333 144 87 5 194 336 383 518 2.92e-12 68.9
Msa0639150 AT3G03060.1 32.450 151 93 5 194 343 387 529 4.11e-12 68.6
Msa0639150 AT5G17740.1 29.282 181 110 6 156 326 208 380 9.96e-12 67.0
Msa0639150 AT3G50930.1 31.319 182 105 8 156 326 262 434 1.50e-11 66.6
Msa0639150 AT3G50940.1 30.178 169 105 5 163 326 216 376 2.05e-11 65.9

Find 119 sgRNAs with CRISPR-Local

Find 393 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTAAAATTAAGAGTTTA+AGG 0.155258 4_3:-34813127 Msa0639150:three_prime_UTR
AAAAGCTCAGGATGTTTAAT+TGG 0.236938 4_3:+34815771 None:intergenic
TCACAGGGTGTCTTGCTCTA+TGG 0.253894 4_3:-34815630 Msa0639150:intron
CAAACCTCTTCATTAGGATT+TGG 0.256280 4_3:+34814610 None:intergenic
GTTGGGAGGGTATTCGATTT+TGG 0.269548 4_3:+34818656 None:intergenic
CTCCCCTTGTTTGGTTGGTT+TGG 0.269659 4_3:+34818343 None:intergenic
ACTTGAGTCTATAAAATTAA+AGG 0.291828 4_3:-34813101 Msa0639150:three_prime_UTR
GGAAGAACTGCAGCTTCTTC+AGG 0.294426 4_3:-34817143 Msa0639150:CDS
CTTACCGCACTTTCAGTTCA+TGG 0.305335 4_3:-34813279 Msa0639150:three_prime_UTR
TCAACAACATATTTCCCTTC+TGG 0.316681 4_3:+34816107 None:intergenic
CGCTCCATCAATTATCTTCA+TGG 0.333056 4_3:-34815054 Msa0639150:CDS
AACTAAAGAGAGTAAATAAA+AGG 0.334241 4_3:+34813183 None:intergenic
TTAAATTCATTCTTCTTGAA+TGG 0.356511 4_3:+34814454 None:intergenic
ACGGAGACCCTCCCCTTGTT+TGG 0.367288 4_3:+34818334 None:intergenic
AAGATGCAAACCTCTTCATT+AGG 0.374465 4_3:+34814604 None:intergenic
GAGAAGGTTCTAGAATGGTT+AGG 0.383338 4_3:-34815503 Msa0639150:CDS
ATTTAAAATTAAGAGTTTAA+GGG 0.384322 4_3:-34813126 Msa0639150:three_prime_UTR
TGTACATTCATCAGGGTGTC+TGG 0.388654 4_3:-34815552 Msa0639150:CDS
CACAGGGTGTCTTGCTCTAT+GGG 0.390742 4_3:-34815629 Msa0639150:intron
TCGTCCATGAAGATAATTGA+TGG 0.392466 4_3:+34815050 None:intergenic
ATACTGATTGTACATTCATC+AGG 0.399410 4_3:-34815560 Msa0639150:CDS
TTATCGTACTGAATTTATAA+AGG 0.399505 4_3:-34818590 Msa0639150:intron
AACGTAACGAGCTCAATTCC+AGG 0.402202 4_3:-34818232 Msa0639150:CDS
TTTGGACAGTGAGGATGCTT+CGG 0.403502 4_3:-34817165 Msa0639150:intron
GGATCTGCTCGTATGGAATC+TGG 0.411007 4_3:-34815014 Msa0639150:CDS
AGCATCTGGTGCTGAGCTTA+AGG 0.412390 4_3:-34814388 Msa0639150:intron
ACCAATGGATCAACTTTGCT+TGG 0.422834 4_3:+34815996 None:intergenic
TTCTTCTTCTTCGGACGCGA+TGG 0.425395 4_3:+34818620 None:intergenic
CACCAATCGGATTGATATCC+TGG 0.427746 4_3:-34814680 Msa0639150:CDS
TGTCAATCCGTCCAGGTCTC+AGG 0.427849 4_3:+34814647 None:intergenic
ATGGACGAAATTGACAGTAT+TGG 0.429793 4_3:-34815035 Msa0639150:CDS
TTGGACAGTGAGGATGCTTC+GGG 0.433244 4_3:-34817164 Msa0639150:intron
GTCTTGCTCTATGGGCCACC+TGG 0.438579 4_3:-34815621 Msa0639150:CDS
CTCTATGGGCCACCTGGTAC+AGG 0.438619 4_3:-34815615 Msa0639150:CDS
ATCATGTCATATGTAGAATC+AGG 0.441088 4_3:+34815948 None:intergenic
TCCAAGCAAAGTTGATCCAT+TGG 0.453561 4_3:-34815997 Msa0639150:CDS
AGTTGATCGGATCTGATCTA+TGG 0.459323 4_3:-34818423 Msa0639150:exon
TAGGCTGTGTGCACTGAAGC+TGG 0.461439 4_3:-34813479 Msa0639150:CDS
TGAGACCTGGACGGATTGAC+AGG 0.462916 4_3:-34814645 Msa0639150:CDS
TTGGCAGAGCAATGCTCCTC+CGG 0.467372 4_3:+34818362 None:intergenic
AGAAGGTTCTAGAATGGTTA+GGG 0.470154 4_3:-34815502 Msa0639150:CDS
CAGTATTGGATCTGCTCGTA+TGG 0.473028 4_3:-34815021 Msa0639150:CDS
ACTGCAGCTTCTTCAGGAGC+CGG 0.474454 4_3:-34817137 Msa0639150:CDS
TTCGGACGCGATGGTGAAGT+TGG 0.476366 4_3:+34818629 None:intergenic
AGACCCTCCCCTTGTTTGGT+TGG 0.479760 4_3:+34818338 None:intergenic
GTCTCAGGAGTGCTTGATCC+AGG 0.483737 4_3:+34814662 None:intergenic
TGAAGCTTCCAATAAGATCA+AGG 0.484032 4_3:-34814925 Msa0639150:intron
CAGGAGCCGGGTTCATATGT+TGG 0.485016 4_3:-34817124 Msa0639150:CDS
AACATTGTTGGCTAGGGCAG+TGG 0.488091 4_3:-34815589 Msa0639150:CDS
AAGCTTCAAATCCATCCAAC+TGG 0.490388 4_3:+34814940 None:intergenic
GAGAAGATGAATGGAGCATC+TGG 0.497037 4_3:-34814402 Msa0639150:CDS
ATGGTGAAGTTGGTGATGTT+GGG 0.498666 4_3:+34818639 None:intergenic
GAACTTGTTCAGAAATACAT+TGG 0.500672 4_3:-34815525 Msa0639150:CDS
CGAAGAGCAACTCTAGTAGA+TGG 0.500788 4_3:+34816050 None:intergenic
GAAGCATGCCGAGGGTGCAC+CGG 0.505872 4_3:-34818381 Msa0639150:CDS
AAGATTGCTGAGAAGATGAA+TGG 0.505915 4_3:-34814411 Msa0639150:CDS
GAACTTCTCAACCAGTTGGA+TGG 0.506806 4_3:-34814951 Msa0639150:CDS
CTGCAGCTTCTTCAGGAGCC+GGG 0.508110 4_3:-34817136 Msa0639150:CDS
ATCTTCCTGTCAATCCGTCC+AGG 0.508744 4_3:+34814640 None:intergenic
ATGCTCCTCCGGTGCACCCT+CGG 0.511471 4_3:+34818373 None:intergenic
CATTGGAGAAGGTTCTAGAA+TGG 0.526027 4_3:-34815508 Msa0639150:CDS
GAGGAGGGTACATGTGACTC+AGG 0.527605 4_3:-34813438 Msa0639150:CDS
ACATGTCATTGAGGAAGTTG+TGG 0.527779 4_3:-34813364 Msa0639150:CDS
GTTCAGAAATACATTGGAGA+AGG 0.530083 4_3:-34815519 Msa0639150:CDS
GATGGTGAAGTTGGTGATGT+TGG 0.530205 4_3:+34818638 None:intergenic
CTTTCAGTTCATGGTCACTC+TGG 0.534554 4_3:-34813270 Msa0639150:three_prime_UTR
GGTCTCCTTCTTCATCACCT+TGG 0.536682 4_3:+34813394 None:intergenic
GATTCTACATATGACATGAT+TGG 0.538886 4_3:-34815945 Msa0639150:CDS
GTGAAGTTGGTGATGTTGGG+AGG 0.539661 4_3:+34818642 None:intergenic
CAGGATATCAATCCGATTGG+TGG 0.543342 4_3:+34814681 None:intergenic
GTTGGAACTTCTCAACCAGT+TGG 0.548554 4_3:-34814955 Msa0639150:CDS
TTTCTTCAGGTCCATCCAGA+AGG 0.548623 4_3:-34816122 Msa0639150:intron
AAGGTACAACTGAACAAGAA+AGG 0.548726 4_3:+34813202 None:intergenic
GCATGCCGAGGGTGCACCGG+AGG 0.551420 4_3:-34818378 Msa0639150:CDS
GCTCGTATGGAATCTGGAAG+TGG 0.557452 4_3:-34815008 Msa0639150:CDS
TGAAGTGCAGCGTACTATGT+TGG 0.558127 4_3:-34814973 Msa0639150:CDS
ATTTCCAAATCCTAATGAAG+AGG 0.559940 4_3:-34814614 Msa0639150:intron
TCTGCCAAACCAACCAAACA+AGG 0.562521 4_3:-34818347 Msa0639150:CDS
GAATGTTTGCTCTGAGAGAG+AGG 0.563359 4_3:-34813457 Msa0639150:CDS
CAACATATTTCCCTTCTGGA+TGG 0.563974 4_3:+34816111 None:intergenic
CGTGGCCAAGGTGATGAAGA+AGG 0.564116 4_3:-34813399 Msa0639150:CDS
ACAAATCAAAGAAATAAAAG+AGG 0.566379 4_3:-34815910 Msa0639150:intron
GGCGAAGTTGTTAAAGTGAT+GGG 0.568488 4_3:-34817103 Msa0639150:CDS
ATCCAGGATATCAATCCGAT+TGG 0.573250 4_3:+34814678 None:intergenic
GATCAAGCACTCCTGAGACC+TGG 0.576588 4_3:-34814658 Msa0639150:CDS
TTCTTCAGGTCCATCCAGAA+GGG 0.577294 4_3:-34816121 Msa0639150:intron
GATGGGCAAGAACAAAGTCT+TGG 0.577623 4_3:-34817086 Msa0639150:CDS
TGAAGTTGGTGATGTTGGGA+GGG 0.586886 4_3:+34818643 None:intergenic
CGTTACGTTGCGCCTCGAGA+CGG 0.590961 4_3:+34818246 None:intergenic
ACGTAACGAGCTCAATTCCA+GGG 0.592746 4_3:-34818231 Msa0639150:CDS
GCGTCCGAAGAAGAAGAAGA+AGG 0.593155 4_3:-34818615 Msa0639150:five_prime_UTR
TGGCGAAGTTGTTAAAGTGA+TGG 0.597144 4_3:-34817104 Msa0639150:CDS
CTTCTTCATCACCTTGGCCA+CGG 0.598381 4_3:+34813400 None:intergenic
ATGGAATCTGGAAGTGGCAA+TGG 0.600506 4_3:-34815002 Msa0639150:CDS
GGTGAAGGAGCTGAAGCTCA+TGG 0.606891 4_3:+34818291 None:intergenic
TGTGCTGAGTATAGTATTGA+CGG 0.610288 4_3:+34818315 None:intergenic
TCTACATATGACATGATTGG+TGG 0.611571 4_3:-34815942 Msa0639150:CDS
ACTTTCATCAGATTAACCAA+TGG 0.612930 4_3:+34815981 None:intergenic
CAAACCAACCAAACAAGGGG+AGG 0.622103 4_3:-34818342 Msa0639150:CDS
CATGAACTGAAAGTGCGGTA+AGG 0.622120 4_3:+34813280 None:intergenic
GTTTGCTCTGAGAGAGAGGA+GGG 0.624635 4_3:-34813453 Msa0639150:CDS
ATCTGATCTATGGCTGCCGT+CGG 0.626800 4_3:-34818413 Msa0639150:exon
TACTGATTGTACATTCATCA+GGG 0.626895 4_3:-34815559 Msa0639150:CDS
CAAGAACAAAGTCTTGGTCA+AGG 0.631707 4_3:-34817080 Msa0639150:intron
CTGCCAAACCAACCAAACAA+GGG 0.631755 4_3:-34818346 Msa0639150:CDS
TGCCAAACCAACCAAACAAG+GGG 0.631947 4_3:-34818345 Msa0639150:CDS
AGAAGAATGAATTTAATGCG+TGG 0.632686 4_3:-34814447 Msa0639150:CDS
GTAGAAGTGAAGCATGCCGA+GGG 0.639336 4_3:-34818389 Msa0639150:CDS
TCTTGGAATAGCTCAACCAA+AGG 0.648483 4_3:-34815742 Msa0639150:intron
AGTAGAAGTGAAGCATGCCG+AGG 0.652737 4_3:-34818390 Msa0639150:CDS
AAGCACTCCTGAGACCTGGA+CGG 0.655986 4_3:-34814654 Msa0639150:CDS
AAACCAACCAAACAAGGGGA+GGG 0.659041 4_3:-34818341 Msa0639150:CDS
TGTTTGCTCTGAGAGAGAGG+AGG 0.667718 4_3:-34813454 Msa0639150:CDS
ATGCTTCACTTCTACTCCGA+CGG 0.669417 4_3:+34818397 None:intergenic
ACTTCGCCAACATATGAACC+CGG 0.670617 4_3:+34817118 None:intergenic
TCATAATCTTAACCGTCTCG+AGG 0.679147 4_3:-34818258 Msa0639150:CDS
GAGGGTACATGTGACTCAGG+AGG 0.695355 4_3:-34813435 Msa0639150:CDS
CGTAACGAGCTCAATTCCAG+GGG 0.706512 4_3:-34818230 Msa0639150:intron
GTGACCATGAACTGAAAGTG+CGG 0.706684 4_3:+34813275 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATACACAAAAAAAAAA+AGG - chr4_3:34814085-34814104 Msa0639150:intron 10.0%
!! TAATAGAAGATATTATTTAT+TGG + chr4_3:34814315-34814334 None:intergenic 10.0%
!!! AATTTAAAATTAAGAGTTTA+AGG - chr4_3:34818657-34818676 Msa0639150:five_prime_UTR 10.0%
!!! ATTTAAAATTAAGAGTTTAA+GGG - chr4_3:34818658-34818677 Msa0639150:five_prime_UTR 10.0%
!! AATTATAAATTAGGGTTATT+AGG - chr4_3:34813257-34813276 Msa0639150:three_prime_UTR 15.0%
!!! TTTTAATTTTTTAGACAACT+GGG + chr4_3:34813864-34813883 None:intergenic 15.0%
!!! TTTTTAATTTTTTAGACAAC+TGG + chr4_3:34813865-34813884 None:intergenic 15.0%
!! AAAAAATTAAAAATGAGTAG+AGG - chr4_3:34813872-34813891 Msa0639150:intron 15.0%
!!! TATAGTTTTAAGACAAATAT+TGG - chr4_3:34814167-34814186 Msa0639150:intron 15.0%
!! TCTATTACATCAAATTTATT+AGG - chr4_3:34814328-34814347 Msa0639150:intron 15.0%
!!! AATACAGAAAAGTTATTTTT+GGG + chr4_3:34814579-34814598 None:intergenic 15.0%
!!! AAATACAGAAAAGTTATTTT+TGG + chr4_3:34814580-34814599 None:intergenic 15.0%
!! AGAATTTAGATTAATCAATA+CGG + chr4_3:34815385-34815404 None:intergenic 15.0%
!! TAAAATGTATAATTGTAATG+TGG - chr4_3:34816517-34816536 Msa0639150:intron 15.0%
!!! TTTTTTTTTTAATGATGCTA+TGG - chr4_3:34816888-34816907 Msa0639150:intron 15.0%
!! GAATATTATATGAAAATGAA+AGG + chr4_3:34817588-34817607 None:intergenic 15.0%
!! AATAGTATGAAATATAAAAC+TGG - chr4_3:34817763-34817782 Msa0639150:intron 15.0%
!! ATAGTATGAAATATAAAACT+GGG - chr4_3:34817764-34817783 Msa0639150:intron 15.0%
!! TTATCGTACTGAATTTATAA+AGG - chr4_3:34813194-34813213 Msa0639150:three_prime_UTR 20.0%
!!! TAAGATTATGATTCTTTTGA+CGG + chr4_3:34813517-34813536 None:intergenic 20.0%
!! AAGAATAAAAAAGAGGAATA+GGG + chr4_3:34813594-34813613 None:intergenic 20.0%
!! TCAATTCAATAGATAATAAG+AGG - chr4_3:34813688-34813707 Msa0639150:intron 20.0%
!! TCAATTCAATAGATAATAAG+AGG - chr4_3:34813688-34813707 Msa0639150:intron 20.0%
!! AATACAACTCAAATACATTA+GGG + chr4_3:34814138-34814157 None:intergenic 20.0%
!! AAATACAACTCAAATACATT+AGG + chr4_3:34814139-34814158 None:intergenic 20.0%
!!! ATGTATTTGAGTTGTATTTT+TGG - chr4_3:34814140-34814159 Msa0639150:intron 20.0%
!! TTACATCAAATTTATTAGGA+AGG - chr4_3:34814332-34814351 Msa0639150:intron 20.0%
!!! ATTTTCTTTTTCTGTAAGAT+CGG - chr4_3:34814369-34814388 Msa0639150:intron 20.0%
!!! ATACAGAAAAGTTATTTTTG+GGG + chr4_3:34814578-34814597 None:intergenic 20.0%
!! TATTTAGATTAATCAATACG+AGG + chr4_3:34815246-34815265 None:intergenic 20.0%
!! AGTATTTAGACTAATCAATA+CGG + chr4_3:34815349-34815368 None:intergenic 20.0%
!! GAATTTAGATTAATCAATAC+GGG + chr4_3:34815384-34815403 None:intergenic 20.0%
!! TATAAGGATAAAAATTCCAT+AGG + chr4_3:34815493-34815512 None:intergenic 20.0%
!! CACTATTAAAGTGATTTATA+AGG + chr4_3:34815509-34815528 None:intergenic 20.0%
!! TTATTATTAATTTCATGCAC+AGG + chr4_3:34815602-34815621 None:intergenic 20.0%
!!! CTTTTATTTCTTTGATTTGT+TGG + chr4_3:34815874-34815893 None:intergenic 20.0%
!! ACAAATCAAAGAAATAAAAG+AGG - chr4_3:34815874-34815893 Msa0639150:intron 20.0%
!!! TCATTTACATCAAATTTTAC+AGG - chr4_3:34815979-34815998 Msa0639150:CDS 20.0%
!! AAAAATTACCTTGATCTTAT+TGG + chr4_3:34816870-34816889 None:intergenic 20.0%
!! TGTAAATATAAAACTGTAAG+AGG - chr4_3:34816985-34817004 Msa0639150:intron 20.0%
!! GTAAATATAAAACTGTAAGA+GGG - chr4_3:34816986-34817005 Msa0639150:intron 20.0%
!! TGAAGAAAAATTGCAATTAT+AGG - chr4_3:34817071-34817090 Msa0639150:intron 20.0%
!!! ATATAGTTGTTTTCAGTAAA+TGG + chr4_3:34817277-34817296 None:intergenic 20.0%
!! TTAAATTCATTCTTCTTGAA+TGG + chr4_3:34817333-34817352 None:intergenic 20.0%
!! TGTAATATGGAATATAAAAC+TGG - chr4_3:34817787-34817806 Msa0639150:intron 20.0%
!! GTAATATGGAATATAAAACT+GGG - chr4_3:34817788-34817807 Msa0639150:intron 20.0%
!!! TGATTTGTATTTTATGTTTC+TGG - chr4_3:34818446-34818465 Msa0639150:intron 20.0%
!! AACTAAAGAGAGTAAATAAA+AGG + chr4_3:34818604-34818623 None:intergenic 20.0%
!! ACTTGAGTCTATAAAATTAA+AGG - chr4_3:34818683-34818702 Msa0639150:five_prime_UTR 20.0%
!!! ATTTTGGTAGAATTGAATTG+GGG + chr4_3:34813115-34813134 None:intergenic 25.0%
!!! GATTTTGGTAGAATTGAATT+GGG + chr4_3:34813116-34813135 None:intergenic 25.0%
! TTGGGGGTTAATTATAAATT+AGG - chr4_3:34813248-34813267 Msa0639150:three_prime_UTR 25.0%
! TGGGGGTTAATTATAAATTA+GGG - chr4_3:34813249-34813268 Msa0639150:three_prime_UTR 25.0%
!! TGAATCTGATTTGTAGAATT+AGG - chr4_3:34813289-34813308 Msa0639150:three_prime_UTR 25.0%
!! GAATCTGATTTGTAGAATTA+GGG - chr4_3:34813290-34813309 Msa0639150:three_prime_UTR 25.0%
!!! TATTTTACAGTAGAGTTGAT+CGG - chr4_3:34813348-34813367 Msa0639150:exon 25.0%
! CAAGAATAAAAAAGAGGAAT+AGG + chr4_3:34813595-34813614 None:intergenic 25.0%
! GCAATTCAAGAATAAAAAAG+AGG + chr4_3:34813601-34813620 None:intergenic 25.0%
! CAATAGATAATAAGAGGATA+TGG - chr4_3:34813694-34813713 Msa0639150:intron 25.0%
! CAATAGATAATAAGAGGATA+TGG - chr4_3:34813694-34813713 Msa0639150:intron 25.0%
!! ATAAACTGATTCAAAATCTG+AGG + chr4_3:34813770-34813789 None:intergenic 25.0%
!! AAAACTTTGTTGTGTTTATG+TGG - chr4_3:34814018-34814037 Msa0639150:intron 25.0%
!! AAACTTTGTTGTGTTTATGT+GGG - chr4_3:34814019-34814038 Msa0639150:intron 25.0%
!! TTCTTGAAGGTGTATAAAAA+TGG + chr4_3:34814495-34814514 None:intergenic 25.0%
! TTGATACATCATATTCTTGA+AGG + chr4_3:34814508-34814527 None:intergenic 25.0%
! ATATATAACAGTACAGATAG+CGG + chr4_3:34814799-34814818 None:intergenic 25.0%
!! CTCTTTTCATTATTCATTGT+TGG - chr4_3:34815023-34815042 Msa0639150:CDS 25.0%
! TCTAGCAGAATACTATTTAA+AGG - chr4_3:34815152-34815171 Msa0639150:intron 25.0%
! GAAGCATAGATCAATAAAAA+TGG + chr4_3:34815219-34815238 None:intergenic 25.0%
! TAAATACTCATGTACATAGT+TGG - chr4_3:34815260-34815279 Msa0639150:intron 25.0%
! ACTATGTATAGCATTTAAGA+AGG + chr4_3:34815302-34815321 None:intergenic 25.0%
! TCTTAAATGCTATACATAGT+TGG - chr4_3:34815302-34815321 Msa0639150:intron 25.0%
! TATTTAGACTAATCAATACG+GGG + chr4_3:34815347-34815366 None:intergenic 25.0%
! GTATTTAGACTAATCAATAC+GGG + chr4_3:34815348-34815367 None:intergenic 25.0%
! ACTAAAATAGTACAGAATCT+TGG - chr4_3:34815463-34815482 Msa0639150:intron 25.0%
!!! TTGTGAGACATTGTTTTTTA+AGG + chr4_3:34816611-34816630 None:intergenic 25.0%
! AGTAGTGTTACATATCATAT+TGG + chr4_3:34816693-34816712 None:intergenic 25.0%
!!! ATTGCAATTATAGGTTTTGA+TGG - chr4_3:34817080-34817099 Msa0639150:intron 25.0%
! TATATGTATATGTATGCTGA+AGG + chr4_3:34817254-34817273 None:intergenic 25.0%
!!! AATGGATTTTCAAGATATCT+CGG + chr4_3:34817315-34817334 None:intergenic 25.0%
! AAACAAAGTGATTGCATAAT+GGG + chr4_3:34817610-34817629 None:intergenic 25.0%
!! AATTTTACAATGCGAAACAA+AGG - chr4_3:34817653-34817672 Msa0639150:intron 25.0%
! CAATAACAACATGTTAATGT+TGG + chr4_3:34817691-34817710 None:intergenic 25.0%
! ATATAAAACTGGGTGTAATA+TGG - chr4_3:34817774-34817793 Msa0639150:intron 25.0%
! TAATAGTTGATTGGATTGTT+GGG - chr4_3:34817885-34817904 Msa0639150:intron 25.0%
! CATAATTCTATCTGAATAGT+AGG + chr4_3:34818132-34818151 None:intergenic 25.0%
!!! TCTGTGCTTTTATTTTATGT+AGG - chr4_3:34818286-34818305 Msa0639150:CDS 25.0%
! TTTTGGTAGAATTGAATTGG+GGG + chr4_3:34813114-34813133 None:intergenic 30.0%
!! CGATTTTGGTAGAATTGAAT+TGG + chr4_3:34813117-34813136 None:intergenic 30.0%
AAATCCTTCTTCTTCTTCTT+CGG + chr4_3:34813176-34813195 None:intergenic 30.0%
!!! TCGCTCTTATTTTGGAATTT+GGG - chr4_3:34813230-34813249 Msa0639150:three_prime_UTR 30.0%
GAAGTGATATAGCAAATGAT+AGG + chr4_3:34814399-34814418 None:intergenic 30.0%
AAATGGTAGTAAATCAGTGA+AGG + chr4_3:34814478-34814497 None:intergenic 30.0%
TCCAAATTGCAATTGAATCA+GGG + chr4_3:34814605-34814624 None:intergenic 30.0%
AAAAACAAATTGAGCCATCA+TGG + chr4_3:34814771-34814790 None:intergenic 30.0%
AGTGTATTATGCAACAATAG+TGG + chr4_3:34814909-34814928 None:intergenic 30.0%
TTATGTATCTTTGAGTCCAT+GGG - chr4_3:34815179-34815198 Msa0639150:intron 30.0%
AAATAGTACAGAATCTTGGT+TGG - chr4_3:34815467-34815486 Msa0639150:intron 30.0%
GAACTCATGACTATATCTAA+TGG - chr4_3:34815563-34815582 Msa0639150:CDS 30.0%
TTATTAATTTCATGCACAGG+TGG + chr4_3:34815599-34815618 None:intergenic 30.0%
GAACAAAAAATCCTAGACAA+AGG - chr4_3:34815622-34815641 Msa0639150:CDS 30.0%
!! AGTTTCCATTACTTTTCTTC+AGG - chr4_3:34815649-34815668 Msa0639150:intron 30.0%
ACTTTCATCAGATTAACCAA+TGG + chr4_3:34815806-34815825 None:intergenic 30.0%
ATCATGTCATATGTAGAATC+AGG + chr4_3:34815839-34815858 None:intergenic 30.0%
GATTCTACATATGACATGAT+TGG - chr4_3:34815839-34815858 Msa0639150:intron 30.0%
AAAAGCTCAGGATGTTTAAT+TGG + chr4_3:34816016-34816035 None:intergenic 30.0%
AACTCATGCAATATTACCTT+TGG + chr4_3:34816061-34816080 None:intergenic 30.0%
! TACTCTATTTTACGTATCAC+AGG - chr4_3:34816138-34816157 Msa0639150:intron 30.0%
! ACTCTATTTTACGTATCACA+GGG - chr4_3:34816139-34816158 Msa0639150:intron 30.0%
! ATACTGATTGTACATTCATC+AGG - chr4_3:34816224-34816243 Msa0639150:intron 30.0%
! TACTGATTGTACATTCATCA+GGG - chr4_3:34816225-34816244 Msa0639150:intron 30.0%
! GAACTTGTTCAGAAATACAT+TGG - chr4_3:34816259-34816278 Msa0639150:intron 30.0%
!! TAGCATCGACATAAATAAGA+GGG - chr4_3:34816361-34816380 Msa0639150:intron 30.0%
CTTCAAAAACTCAGTTACTA+GGG + chr4_3:34816479-34816498 None:intergenic 30.0%
ACTTCAAAAACTCAGTTACT+AGG + chr4_3:34816480-34816499 None:intergenic 30.0%
! ACCTTTGAAAAGACAACAAT+GGG - chr4_3:34816577-34816596 Msa0639150:intron 30.0%
ACATTTACTTCAAATGAGCA+TGG + chr4_3:34816651-34816670 None:intergenic 30.0%
! TTTGAAGTAAATGTGTTCTG+AGG - chr4_3:34816657-34816676 Msa0639150:intron 30.0%
ATTAGAGGGAATTCCAAAAT+TGG - chr4_3:34816941-34816960 Msa0639150:intron 30.0%
GTGAACGTATAACTCAAATT+AGG + chr4_3:34817035-34817054 None:intergenic 30.0%
GTTATACGTTCACAATTTAG+AGG - chr4_3:34817042-34817061 Msa0639150:intron 30.0%
ATTTCCAAATCCTAATGAAG+AGG - chr4_3:34817170-34817189 Msa0639150:intron 30.0%
AGAAGAATGAATTTAATGCG+TGG - chr4_3:34817337-34817356 Msa0639150:intron 30.0%
GCACTTATTGAGATAAACAA+CGG - chr4_3:34817559-34817578 Msa0639150:intron 30.0%
CACTTATTGAGATAAACAAC+GGG - chr4_3:34817560-34817579 Msa0639150:intron 30.0%
CAAACAAAGTGATTGCATAA+TGG + chr4_3:34817611-34817630 None:intergenic 30.0%
! TATGCAATCACTTTGTTTGA+TGG - chr4_3:34817612-34817631 Msa0639150:intron 30.0%
! ATGCAATCACTTTGTTTGAT+GGG - chr4_3:34817613-34817632 Msa0639150:intron 30.0%
! GTTGTCTAAGATATTATCTC+AGG - chr4_3:34817710-34817729 Msa0639150:intron 30.0%
CTAATAGTTGATTGGATTGT+TGG - chr4_3:34817884-34817903 Msa0639150:intron 30.0%
CAGTTATAAACACTTCATAG+TGG - chr4_3:34817969-34817988 Msa0639150:intron 30.0%
AATAGTAGGAATTGTGAAAG+GGG + chr4_3:34818118-34818137 None:intergenic 30.0%
GAATAGTAGGAATTGTGAAA+GGG + chr4_3:34818119-34818138 None:intergenic 30.0%
TGAATAGTAGGAATTGTGAA+AGG + chr4_3:34818120-34818139 None:intergenic 30.0%
CTATTCAGATAGAATTATGC+TGG - chr4_3:34818133-34818152 Msa0639150:intron 30.0%
ATTATGCTGGAATGTCATAA+TGG - chr4_3:34818146-34818165 Msa0639150:intron 30.0%
!!! CTCGCTCTTATTTTGGAATT+TGG - chr4_3:34813229-34813248 Msa0639150:three_prime_UTR 35.0%
!!! CGCTCTTATTTTGGAATTTG+GGG - chr4_3:34813231-34813250 Msa0639150:three_prime_UTR 35.0%
!!! GCTCTTATTTTGGAATTTGG+GGG - chr4_3:34813232-34813251 Msa0639150:three_prime_UTR 35.0%
! TGTGCTGAGTATAGTATTGA+CGG + chr4_3:34813472-34813491 None:intergenic 35.0%
! TATGATTCTTTTGACGGTGA+AGG + chr4_3:34813511-34813530 None:intergenic 35.0%
AATCAGTTTATTTACCCCTC+TGG - chr4_3:34813779-34813798 Msa0639150:intron 35.0%
ATCAGTTTATTTACCCCTCT+GGG - chr4_3:34813780-34813799 Msa0639150:intron 35.0%
!! GTTGATTTGTATCACCCTTT+GGG - chr4_3:34813802-34813821 Msa0639150:intron 35.0%
!! TTGATTTGTATCACCCTTTG+GGG - chr4_3:34813803-34813822 Msa0639150:intron 35.0%
AAAATGAGTAGAGGACATTG+TGG - chr4_3:34813881-34813900 Msa0639150:intron 35.0%
GGGTAATATGGAATTCAACA+AGG - chr4_3:34813925-34813944 Msa0639150:intron 35.0%
TAGTTACAGACCAATCTTGT+TGG - chr4_3:34813956-34813975 Msa0639150:intron 35.0%
CTCAATTTCTCCAACAAGAT+TGG + chr4_3:34813969-34813988 None:intergenic 35.0%
AGAAATTGAGAGTAGTAGTG+AGG - chr4_3:34813979-34813998 Msa0639150:intron 35.0%
GAAATTGAGAGTAGTAGTGA+GGG - chr4_3:34813980-34813999 Msa0639150:intron 35.0%
TTGTTGTGTTTATGTGGGTT+TGG - chr4_3:34814024-34814043 Msa0639150:intron 35.0%
TGTTGTGTTTATGTGGGTTT+GGG - chr4_3:34814025-34814044 Msa0639150:intron 35.0%
TTTGAAAAAACACCGCTCAA+AGG + chr4_3:34814193-34814212 None:intergenic 35.0%
GATATTGACACAACATCAAC+TGG - chr4_3:34814235-34814254 Msa0639150:intron 35.0%
! TCTTTTTCTGTAAGATCGGT+TGG - chr4_3:34814373-34814392 Msa0639150:intron 35.0%
TCCCTGATTCAATTGCAATT+TGG - chr4_3:34814601-34814620 Msa0639150:intron 35.0%
GTCCAAATTGCAATTGAATC+AGG + chr4_3:34814606-34814625 None:intergenic 35.0%
TGTTAAATAGCCAGCTATAG+TGG - chr4_3:34814847-34814866 Msa0639150:intron 35.0%
ACTTTACCACTATAGTGTAG+CGG - chr4_3:34814871-34814890 Msa0639150:intron 35.0%
GAATTGTCTATGTCTCACAT+TGG - chr4_3:34815045-34815064 Msa0639150:CDS 35.0%
!! GAAAAGTTTTGACAAGACCA+CGG + chr4_3:34815125-34815144 None:intergenic 35.0%
CTTATGTATCTTTGAGTCCA+TGG - chr4_3:34815178-34815197 Msa0639150:intron 35.0%
AAGTCTTCACTTCGCATTTA+AGG + chr4_3:34815439-34815458 None:intergenic 35.0%
TCATGACTATATCTAATGGC+AGG - chr4_3:34815567-34815586 Msa0639150:CDS 35.0%
ATGGACCTGAAGAAAAGTAA+TGG + chr4_3:34815657-34815676 None:intergenic 35.0%
TCAACAACATATTTCCCTTC+TGG + chr4_3:34815680-34815699 None:intergenic 35.0%
TCTACATATGACATGATTGG+TGG - chr4_3:34815842-34815861 Msa0639150:intron 35.0%
! AACAATGTTTTTCCTGTACC+AGG + chr4_3:34816184-34816203 None:intergenic 35.0%
TGGTACAGGAAAAACATTGT+TGG - chr4_3:34816183-34816202 Msa0639150:intron 35.0%
! AGGAAAAACATTGTTGGCTA+GGG - chr4_3:34816189-34816208 Msa0639150:intron 35.0%
GTTCAGAAATACATTGGAGA+AGG - chr4_3:34816265-34816284 Msa0639150:intron 35.0%
!! AGAAGGTTCTAGAATGGTTA+GGG - chr4_3:34816282-34816301 Msa0639150:intron 35.0%
! GGTTAGGGAACTTTTTGTTA+TGG - chr4_3:34816297-34816316 Msa0639150:intron 35.0%
ACAATGAATGGAGTAGGTTT+AGG + chr4_3:34816340-34816359 None:intergenic 35.0%
!! GTAGCATCGACATAAATAAG+AGG - chr4_3:34816360-34816379 Msa0639150:intron 35.0%
ATGGTCGAAGATATATCTGA+TGG - chr4_3:34816419-34816438 Msa0639150:intron 35.0%
TGGTCGAAGATATATCTGAT+GGG - chr4_3:34816420-34816439 Msa0639150:intron 35.0%
! TCTTTTCAAAGGTCAGTTAG+TGG + chr4_3:34816570-34816589 None:intergenic 35.0%
! GACCTTTGAAAAGACAACAA+TGG - chr4_3:34816576-34816595 Msa0639150:intron 35.0%
! TAACACTACTCCTTTTCACA+GGG - chr4_3:34816703-34816722 Msa0639150:intron 35.0%
TCGTCCATGAAGATAATTGA+TGG + chr4_3:34816737-34816756 None:intergenic 35.0%
ATGGACGAAATTGACAGTAT+TGG - chr4_3:34816749-34816768 Msa0639150:intron 35.0%
TGAAGCTTCCAATAAGATCA+AGG - chr4_3:34816859-34816878 Msa0639150:intron 35.0%
! ATGCTATGGTAGTGTATTAG+AGG - chr4_3:34816902-34816921 Msa0639150:intron 35.0%
! TGCTATGGTAGTGTATTAGA+GGG - chr4_3:34816903-34816922 Msa0639150:intron 35.0%
! ATGCTATGGTAGTGTATTAG+AGG - chr4_3:34816902-34816921 Msa0639150:intron 35.0%
! TGCTATGGTAGTGTATTAGA+GGG - chr4_3:34816903-34816922 Msa0639150:intron 35.0%
! AACACACATGTTGCCAATTT+TGG + chr4_3:34816957-34816976 None:intergenic 35.0%
CAAACCTCTTCATTAGGATT+TGG + chr4_3:34817177-34817196 None:intergenic 35.0%
AAGATGCAAACCTCTTCATT+AGG + chr4_3:34817183-34817202 None:intergenic 35.0%
AAGATTGCTGAGAAGATGAA+TGG - chr4_3:34817373-34817392 Msa0639150:intron 35.0%
TTAGATGATAATAGAGCAGC+AGG + chr4_3:34817458-34817477 None:intergenic 35.0%
CACTACTAATTGCTTCAACA+AGG + chr4_3:34817495-34817514 None:intergenic 35.0%
CTTGTTGAAGCAATTAGTAG+TGG - chr4_3:34817493-34817512 Msa0639150:intron 35.0%
! TGCAATCACTTTGTTTGATG+GGG - chr4_3:34817614-34817633 Msa0639150:intron 35.0%
AGATATTATCTCAGGTCATG+AGG - chr4_3:34817718-34817737 Msa0639150:intron 35.0%
TTCATTTCAGAGTGAAGAAC+TGG - chr4_3:34817824-34817843 Msa0639150:intron 35.0%
TCATTTCAGAGTGAAGAACT+GGG - chr4_3:34817825-34817844 Msa0639150:intron 35.0%
AGAACTGGGTGTAATAGTAA+CGG - chr4_3:34817839-34817858 Msa0639150:intron 35.0%
! GTGGGTTACTAATAGTTGAT+TGG - chr4_3:34817876-34817895 Msa0639150:intron 35.0%
ATAAACACTTCATAGTGGTG+AGG - chr4_3:34817974-34817993 Msa0639150:intron 35.0%
TAAACACTTCATAGTGGTGA+GGG - chr4_3:34817975-34817994 Msa0639150:intron 35.0%
! CAAAGTTTGGGTTTATTCCA+TGG - chr4_3:34818033-34818052 Msa0639150:intron 35.0%
GCTATGAATTTACGTGTTCA+TGG - chr4_3:34818181-34818200 Msa0639150:intron 35.0%
CACAGAAAATTGAGCATACT+AGG + chr4_3:34818272-34818291 None:intergenic 35.0%
! CCTCAATGACATGTTTTTCT+CGG + chr4_3:34818414-34818433 None:intergenic 35.0%
AAGGTACAACTGAACAAGAA+AGG + chr4_3:34818585-34818604 None:intergenic 35.0%
!! ATGGTGAAGTTGGTGATGTT+GGG + chr4_3:34813148-34813167 None:intergenic 40.0%
!! TCTCTCTCTCGCTCTTATTT+TGG - chr4_3:34813222-34813241 Msa0639150:three_prime_UTR 40.0%
AGTTGATCGGATCTGATCTA+TGG - chr4_3:34813361-34813380 Msa0639150:CDS 40.0%
TCATAATCTTAACCGTCTCG+AGG - chr4_3:34813526-34813545 Msa0639150:intron 40.0%
TGATACAAATCAACCCAGAG+GGG + chr4_3:34813796-34813815 None:intergenic 40.0%
GTGATACAAATCAACCCAGA+GGG + chr4_3:34813797-34813816 None:intergenic 40.0%
!! GGTTGATTTGTATCACCCTT+TGG - chr4_3:34813801-34813820 Msa0639150:intron 40.0%
TTTAGACAACTGGGTGTAGA+TGG + chr4_3:34813855-34813874 None:intergenic 40.0%
!! GACAAATATTGGCCTTTGAG+CGG - chr4_3:34814178-34814197 Msa0639150:intron 40.0%
!!! TGAGCGGTGTTTTTTCAAAG+TGG - chr4_3:34814194-34814213 Msa0639150:intron 40.0%
CAATTGCAATTTGGACAGTG+AGG - chr4_3:34814610-34814629 Msa0639150:intron 40.0%
TGGCGAAGTTGTTAAAGTGA+TGG - chr4_3:34814680-34814699 Msa0639150:CDS 40.0%
GGCGAAGTTGTTAAAGTGAT+GGG - chr4_3:34814681-34814700 Msa0639150:CDS 40.0%
CAAGAACAAAGTCTTGGTCA+AGG - chr4_3:34814704-34814723 Msa0639150:intron 40.0%
AACAAATTGAGCCATCATGG+TGG + chr4_3:34814768-34814787 None:intergenic 40.0%
CTGCATAAAATAGCGGCTAT+TGG + chr4_3:34814951-34814970 None:intergenic 40.0%
TCGCGAACTGCATAAAATAG+CGG + chr4_3:34814958-34814977 None:intergenic 40.0%
CTCTAGATCATTAATTGCCG+TGG - chr4_3:34815105-34815124 Msa0639150:intron 40.0%
GGATGAAACAATAAAGCCCA+TGG + chr4_3:34815198-34815217 None:intergenic 40.0%
ACTAACAGGAAACAGCAGAA+TGG + chr4_3:34815540-34815559 None:intergenic 40.0%
GTCATGAGTTCATGACTAAC+AGG + chr4_3:34815554-34815573 None:intergenic 40.0%
CAACATATTTCCCTTCTGGA+TGG + chr4_3:34815676-34815695 None:intergenic 40.0%
! TCCAAGCAAAGTTGATCCAT+TGG - chr4_3:34815787-34815806 Msa0639150:intron 40.0%
ACCAATGGATCAACTTTGCT+TGG + chr4_3:34815791-34815810 None:intergenic 40.0%
CCAAGACTTTCAAAAAGCTC+AGG + chr4_3:34816028-34816047 None:intergenic 40.0%
!! CCTGAGCTTTTTGAAAGTCT+TGG - chr4_3:34816025-34816044 Msa0639150:CDS 40.0%
TCTTGGAATAGCTCAACCAA+AGG - chr4_3:34816042-34816061 Msa0639150:CDS 40.0%
! AATGTTTTTCCTGTACCAGG+TGG + chr4_3:34816181-34816200 None:intergenic 40.0%
! CAGGAAAAACATTGTTGGCT+AGG - chr4_3:34816188-34816207 Msa0639150:intron 40.0%
!! CATTGGAGAAGGTTCTAGAA+TGG - chr4_3:34816276-34816295 Msa0639150:intron 40.0%
!! GAGAAGGTTCTAGAATGGTT+AGG - chr4_3:34816281-34816300 Msa0639150:intron 40.0%
TTTAGGTAAGAGGTCAAACC+TGG + chr4_3:34816323-34816342 None:intergenic 40.0%
ATGGAGTAGGTTTAGGTAAG+AGG + chr4_3:34816333-34816352 None:intergenic 40.0%
TGCTACACAATGAATGGAGT+AGG + chr4_3:34816346-34816365 None:intergenic 40.0%
TGTCGATGCTACACAATGAA+TGG + chr4_3:34816352-34816371 None:intergenic 40.0%
! TGACGTTTTCTTGACTTCCA+TGG - chr4_3:34816391-34816410 Msa0639150:intron 40.0%
! CTTGACTTCCATGGCTTTTA+TGG - chr4_3:34816400-34816419 Msa0639150:intron 40.0%
ATCTTCGACCATAAAAGCCA+TGG + chr4_3:34816411-34816430 None:intergenic 40.0%
GGCACAAGTAAACTCAACTT+AGG - chr4_3:34816441-34816460 Msa0639150:intron 40.0%
! GCCCATTGTTGTCTTTTCAA+AGG + chr4_3:34816581-34816600 None:intergenic 40.0%
! GTAACACTACTCCTTTTCAC+AGG - chr4_3:34816702-34816721 Msa0639150:intron 40.0%
CGCTCCATCAATTATCTTCA+TGG - chr4_3:34816730-34816749 Msa0639150:intron 40.0%
AAGCTTCAAATCCATCCAAC+TGG + chr4_3:34816847-34816866 None:intergenic 40.0%
AGTGTATTAGAGGGATGCTA+TGG - chr4_3:34816912-34816931 Msa0639150:intron 40.0%
ATCCAGGATATCAATCCGAT+TGG + chr4_3:34817109-34817128 None:intergenic 40.0%
GTGGAGAAGCTGAATTCATT+TGG - chr4_3:34817512-34817531 Msa0639150:intron 40.0%
! GCAATCACTTTGTTTGATGG+GGG - chr4_3:34817615-34817634 Msa0639150:intron 40.0%
! CAATCACTTTGTTTGATGGG+GGG - chr4_3:34817616-34817635 Msa0639150:intron 40.0%
GAACTGGGTGTAATAGTAAC+GGG - chr4_3:34817840-34817859 Msa0639150:intron 40.0%
AACTGGGTGTAATAGTAACG+GGG - chr4_3:34817841-34817860 Msa0639150:intron 40.0%
! TAGTAACGGGGAACTAAACA+TGG - chr4_3:34817853-34817872 Msa0639150:intron 40.0%
! AGTAACGGGGAACTAAACAT+GGG - chr4_3:34817854-34817873 Msa0639150:intron 40.0%
TTGATTGGATTGTTGGGTAG+TGG - chr4_3:34817891-34817910 Msa0639150:intron 40.0%
!! GGTAGTGGAGAACTAAACAT+GGG - chr4_3:34817906-34817925 Msa0639150:intron 40.0%
! GTGGGTTACTAGTTACAGTT+TGG - chr4_3:34817928-34817947 Msa0639150:intron 40.0%
!! CTAGTTACAGTTTGGTCTTG+CGG - chr4_3:34817936-34817955 Msa0639150:intron 40.0%
!! TAGTTACAGTTTGGTCTTGC+GGG - chr4_3:34817937-34817956 Msa0639150:intron 40.0%
ATTTGGCAAACTTTGTCGTC+TGG - chr4_3:34818008-34818027 Msa0639150:intron 40.0%
TTGTCGTCTGGATCAAAGTT+TGG - chr4_3:34818020-34818039 Msa0639150:intron 40.0%
TGTCGTCTGGATCAAAGTTT+GGG - chr4_3:34818021-34818040 Msa0639150:intron 40.0%
TTGGGTTTATTCCATGGTGT+TGG - chr4_3:34818039-34818058 Msa0639150:intron 40.0%
CCGAGAAAAACATGTCATTG+AGG - chr4_3:34818411-34818430 Msa0639150:exon 40.0%
ACATGTCATTGAGGAAGTTG+TGG - chr4_3:34818420-34818439 Msa0639150:exon 40.0%
!!! GTTGGGAGGGTATTCGATTT+TGG + chr4_3:34813131-34813150 None:intergenic 45.0%
!! TGAAGTTGGTGATGTTGGGA+GGG + chr4_3:34813144-34813163 None:intergenic 45.0%
!! GATGGTGAAGTTGGTGATGT+TGG + chr4_3:34813149-34813168 None:intergenic 45.0%
ATGCTTCACTTCTACTCCGA+CGG + chr4_3:34813390-34813409 None:intergenic 45.0%
TCTGCCAAACCAACCAAACA+AGG - chr4_3:34813437-34813456 Msa0639150:CDS 45.0%
CTGCCAAACCAACCAAACAA+GGG - chr4_3:34813438-34813457 Msa0639150:CDS 45.0%
TGCCAAACCAACCAAACAAG+GGG - chr4_3:34813439-34813458 Msa0639150:CDS 45.0%
AAACCAACCAAACAAGGGGA+GGG - chr4_3:34813443-34813462 Msa0639150:CDS 45.0%
AACGTAACGAGCTCAATTCC+AGG - chr4_3:34813552-34813571 Msa0639150:intron 45.0%
ACGTAACGAGCTCAATTCCA+GGG - chr4_3:34813553-34813572 Msa0639150:intron 45.0%
GGTGATACAAATCAACCCAG+AGG + chr4_3:34813798-34813817 None:intergenic 45.0%
ACACCTTGGATAACCCCAAA+GGG + chr4_3:34813819-34813838 None:intergenic 45.0%
TAGAGGACATTGTGGTTGAG+AGG - chr4_3:34813889-34813908 Msa0639150:intron 45.0%
TCGTCTGGGTTTGGGTAATA+TGG - chr4_3:34813913-34813932 Msa0639150:intron 45.0%
GAGTAGTAGTGAGGGTGATT+TGG - chr4_3:34813988-34814007 Msa0639150:intron 45.0%
!! AGTGAGGGTGATTTGGTCAT+TGG - chr4_3:34813995-34814014 Msa0639150:intron 45.0%
GTTTGGGTCTTGCTAGCATA+GGG - chr4_3:34814041-34814060 Msa0639150:intron 45.0%
TTTGGACAGTGAGGATGCTT+CGG - chr4_3:34814619-34814638 Msa0639150:CDS 45.0%
ACTTCGCCAACATATGAACC+CGG + chr4_3:34814669-34814688 None:intergenic 45.0%
GATGGGCAAGAACAAAGTCT+TGG - chr4_3:34814698-34814717 Msa0639150:intron 45.0%
! TGGTAAAGTGCCACTATAGC+TGG + chr4_3:34814860-34814879 None:intergenic 45.0%
CAAATGCCGCTACACTATAG+TGG + chr4_3:34814880-34814899 None:intergenic 45.0%
CACTATAGTGTAGCGGCATT+TGG - chr4_3:34814878-34814897 Msa0639150:intron 45.0%
!! ACAGAATCTTGGTTGGCCTA+TGG - chr4_3:34815474-34815493 Msa0639150:intron 45.0%
GGAAACTCAGTCCTTTGTCT+AGG + chr4_3:34815636-34815655 None:intergenic 45.0%
TTTCTTCAGGTCCATCCAGA+AGG - chr4_3:34815662-34815681 Msa0639150:intron 45.0%
TTCTTCAGGTCCATCCAGAA+GGG - chr4_3:34815663-34815682 Msa0639150:intron 45.0%
CGAAGAGCAACTCTAGTAGA+TGG + chr4_3:34815737-34815756 None:intergenic 45.0%
! TGTACATTCATCAGGGTGTC+TGG - chr4_3:34816232-34816251 Msa0639150:intron 45.0%
!! GGGAACTTTTTGTTATGGCC+AGG - chr4_3:34816302-34816321 Msa0639150:intron 45.0%
! CAGTATTGGATCTGCTCGTA+TGG - chr4_3:34816763-34816782 Msa0639150:intron 45.0%
ATGGAATCTGGAAGTGGCAA+TGG - chr4_3:34816782-34816801 Msa0639150:intron 45.0%
TGAAGTGCAGCGTACTATGT+TGG - chr4_3:34816811-34816830 Msa0639150:intron 45.0%
GTTGGAACTTCTCAACCAGT+TGG - chr4_3:34816829-34816848 Msa0639150:intron 45.0%
GAACTTCTCAACCAGTTGGA+TGG - chr4_3:34816833-34816852 Msa0639150:intron 45.0%
!! AGGTTTTGATGGCCACCAAT+CGG - chr4_3:34817091-34817110 Msa0639150:CDS 45.0%
CAGGATATCAATCCGATTGG+TGG + chr4_3:34817106-34817125 None:intergenic 45.0%
CACCAATCGGATTGATATCC+TGG - chr4_3:34817104-34817123 Msa0639150:CDS 45.0%
! GAGAAGATGAATGGAGCATC+TGG - chr4_3:34817382-34817401 Msa0639150:intron 45.0%
GATGATAATAGAGCAGCAGG+AGG + chr4_3:34817455-34817474 None:intergenic 45.0%
! ACTTTGTTTGATGGGGGGTA+AGG - chr4_3:34817621-34817640 Msa0639150:intron 45.0%
!! GGGTAGTGGAGAACTAAACA+TGG - chr4_3:34817905-34817924 Msa0639150:intron 45.0%
AGTGGAGAACTAAACATGGG+TGG - chr4_3:34817909-34817928 Msa0639150:intron 45.0%
GTGGAGAACTAAACATGGGT+GGG - chr4_3:34817910-34817929 Msa0639150:intron 45.0%
!! AGTTACAGTTTGGTCTTGCG+GGG - chr4_3:34817938-34817957 Msa0639150:intron 45.0%
!! GAATGTTTGCTCTGAGAGAG+AGG - chr4_3:34818327-34818346 Msa0639150:CDS 45.0%
!! GACTCAGGAGGATTTTGAGA+TGG - chr4_3:34818361-34818380 Msa0639150:CDS 45.0%
! CATGAACTGAAAGTGCGGTA+AGG + chr4_3:34818507-34818526 None:intergenic 45.0%
CTTACCGCACTTTCAGTTCA+TGG - chr4_3:34818505-34818524 Msa0639150:intron 45.0%
GTGACCATGAACTGAAAGTG+CGG + chr4_3:34818512-34818531 None:intergenic 45.0%
CTTTCAGTTCATGGTCACTC+TGG - chr4_3:34818514-34818533 Msa0639150:intron 45.0%
!! GTGAAGTTGGTGATGTTGGG+AGG + chr4_3:34813145-34813164 None:intergenic 50.0%
TTCTTCTTCTTCGGACGCGA+TGG + chr4_3:34813167-34813186 None:intergenic 50.0%
GCGTCCGAAGAAGAAGAAGA+AGG - chr4_3:34813169-34813188 Msa0639150:three_prime_UTR 50.0%
ATCTGATCTATGGCTGCCGT+CGG - chr4_3:34813371-34813390 Msa0639150:CDS 50.0%
AGTAGAAGTGAAGCATGCCG+AGG - chr4_3:34813394-34813413 Msa0639150:CDS 50.0%
GTAGAAGTGAAGCATGCCGA+GGG - chr4_3:34813395-34813414 Msa0639150:CDS 50.0%
! CTCCCCTTGTTTGGTTGGTT+TGG + chr4_3:34813444-34813463 None:intergenic 50.0%
CAAACCAACCAAACAAGGGG+AGG - chr4_3:34813442-34813461 Msa0639150:CDS 50.0%
CGTAACGAGCTCAATTCCAG+GGG - chr4_3:34813554-34813573 Msa0639150:intron 50.0%
GGTTAGAGTAAACGAACCCC+TGG + chr4_3:34813573-34813592 None:intergenic 50.0%
!! TCACCCTTTGGGGTTATCCA+AGG - chr4_3:34813813-34813832 Msa0639150:intron 50.0%
GACACCTTGGATAACCCCAA+AGG + chr4_3:34813820-34813839 None:intergenic 50.0%
!! GTTATCCAAGGTGTCGCAGA+TGG - chr4_3:34813825-34813844 Msa0639150:intron 50.0%
TTGTGGTTGAGAGGATCGTC+TGG - chr4_3:34813898-34813917 Msa0639150:intron 50.0%
TGTGGTTGAGAGGATCGTCT+GGG - chr4_3:34813899-34813918 Msa0639150:intron 50.0%
TTGAGAGGATCGTCTGGGTT+TGG - chr4_3:34813904-34813923 Msa0639150:intron 50.0%
TGAGAGGATCGTCTGGGTTT+GGG - chr4_3:34813905-34813924 Msa0639150:intron 50.0%
GGTTTGGGTCTTGCTAGCAT+AGG - chr4_3:34814040-34814059 Msa0639150:intron 50.0%
GTCTTGCTAGCATAGGGAGT+GGG - chr4_3:34814047-34814066 Msa0639150:intron 50.0%
TTGGACAGTGAGGATGCTTC+GGG - chr4_3:34814620-34814639 Msa0639150:CDS 50.0%
GGAAGAACTGCAGCTTCTTC+AGG - chr4_3:34814641-34814660 Msa0639150:CDS 50.0%
CTTGATCCACTCCACCATGA+TGG - chr4_3:34814754-34814773 Msa0639150:intron 50.0%
! ATTGAGCCATCATGGTGGAG+TGG + chr4_3:34814763-34814782 None:intergenic 50.0%
CCATGTATGCAGACAGAGGA+TGG + chr4_3:34816097-34816116 None:intergenic 50.0%
CCATCCTCTGTCTGCATACA+TGG - chr4_3:34816094-34816113 Msa0639150:CDS 50.0%
ACAGCCATGTATGCAGACAG+AGG + chr4_3:34816101-34816120 None:intergenic 50.0%
! TCACAGGGTGTCTTGCTCTA+TGG - chr4_3:34816154-34816173 Msa0639150:intron 50.0%
! CACAGGGTGTCTTGCTCTAT+GGG - chr4_3:34816155-34816174 Msa0639150:intron 50.0%
! AACATTGTTGGCTAGGGCAG+TGG - chr4_3:34816195-34816214 Msa0639150:intron 50.0%
GGATCTGCTCGTATGGAATC+TGG - chr4_3:34816770-34816789 Msa0639150:intron 50.0%
GCTCGTATGGAATCTGGAAG+TGG - chr4_3:34816776-34816795 Msa0639150:intron 50.0%
ATCTTCCTGTCAATCCGTCC+AGG + chr4_3:34817147-34817166 None:intergenic 50.0%
! AGCATCTGGTGCTGAGCTTA+AGG - chr4_3:34817396-34817415 Msa0639150:intron 50.0%
AACGGGGAACTAAACATGGG+TGG - chr4_3:34817857-34817876 Msa0639150:intron 50.0%
ACGGGGAACTAAACATGGGT+GGG - chr4_3:34817858-34817877 Msa0639150:intron 50.0%
TTCATAGTGGTGAGGGTGAC+TGG - chr4_3:34817982-34818001 Msa0639150:intron 50.0%
TCATAGTGGTGAGGGTGACT+GGG - chr4_3:34817983-34818002 Msa0639150:intron 50.0%
TGTCAACGTCACCAACACCA+TGG + chr4_3:34818053-34818072 None:intergenic 50.0%
!! TGTTTGCTCTGAGAGAGAGG+AGG - chr4_3:34818330-34818349 Msa0639150:CDS 50.0%
!! GTTTGCTCTGAGAGAGAGGA+GGG - chr4_3:34818331-34818350 Msa0639150:CDS 50.0%
CTTCTTCATCACCTTGGCCA+CGG + chr4_3:34818387-34818406 None:intergenic 50.0%
GGTCTCCTTCTTCATCACCT+TGG + chr4_3:34818393-34818412 None:intergenic 50.0%
TTCGGACGCGATGGTGAAGT+TGG + chr4_3:34813158-34813177 None:intergenic 55.0%
TTGGCAGAGCAATGCTCCTC+CGG + chr4_3:34813425-34813444 None:intergenic 55.0%
! AGACCCTCCCCTTGTTTGGT+TGG + chr4_3:34813449-34813468 None:intergenic 55.0%
GGTGAAGGAGCTGAAGCTCA+TGG + chr4_3:34813496-34813515 None:intergenic 55.0%
GTGAACCATCTGCGACACCT+TGG + chr4_3:34813833-34813852 None:intergenic 55.0%
GGTCTTGCTAGCATAGGGAG+TGG - chr4_3:34814046-34814065 Msa0639150:intron 55.0%
ACTGCAGCTTCTTCAGGAGC+CGG - chr4_3:34814647-34814666 Msa0639150:CDS 55.0%
CAGGAGCCGGGTTCATATGT+TGG - chr4_3:34814660-34814679 Msa0639150:CDS 55.0%
!! GTCTCAGGAGTGCTTGATCC+AGG + chr4_3:34817125-34817144 None:intergenic 55.0%
GATCAAGCACTCCTGAGACC+TGG - chr4_3:34817126-34817145 Msa0639150:CDS 55.0%
AAGCACTCCTGAGACCTGGA+CGG - chr4_3:34817130-34817149 Msa0639150:CDS 55.0%
TGTCAATCCGTCCAGGTCTC+AGG + chr4_3:34817140-34817159 None:intergenic 55.0%
!! TGAGACCTGGACGGATTGAC+AGG - chr4_3:34817139-34817158 Msa0639150:CDS 55.0%
GTGAGGGTGACTGGGTCATT+TGG - chr4_3:34817991-34818010 Msa0639150:intron 55.0%
TAGGCTGTGTGCACTGAAGC+TGG - chr4_3:34818305-34818324 Msa0639150:CDS 55.0%
! GAGGAGGGTACATGTGACTC+AGG - chr4_3:34818346-34818365 Msa0639150:CDS 55.0%
! GAGGGTACATGTGACTCAGG+AGG - chr4_3:34818349-34818368 Msa0639150:CDS 55.0%
!!! GGAGGATTTTGAGATGGCCG+TGG - chr4_3:34818367-34818386 Msa0639150:CDS 55.0%
!!! TTTTGAGATGGCCGTGGCCA+AGG - chr4_3:34818373-34818392 Msa0639150:CDS 55.0%
CGTGGCCAAGGTGATGAAGA+AGG - chr4_3:34818385-34818404 Msa0639150:CDS 55.0%
ACGGAGACCCTCCCCTTGTT+TGG + chr4_3:34813453-34813472 None:intergenic 60.0%
CGTTACGTTGCGCCTCGAGA+CGG + chr4_3:34813541-34813560 None:intergenic 60.0%
CTGCAGCTTCTTCAGGAGCC+GGG - chr4_3:34814648-34814667 Msa0639150:CDS 60.0%
GTCTTGCTCTATGGGCCACC+TGG - chr4_3:34816163-34816182 Msa0639150:intron 60.0%
CTCTATGGGCCACCTGGTAC+AGG - chr4_3:34816169-34816188 Msa0639150:intron 60.0%
GGAGCGTGCTCCCTGTGAAA+AGG + chr4_3:34816716-34816735 None:intergenic 60.0%
! GAAGCATGCCGAGGGTGCAC+CGG - chr4_3:34813403-34813422 Msa0639150:CDS 65.0%
ATGCTCCTCCGGTGCACCCT+CGG + chr4_3:34813414-34813433 None:intergenic 65.0%
! GCATGCCGAGGGTGCACCGG+AGG - chr4_3:34813406-34813425 Msa0639150:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 34813099 34818707 34813099 ID=Msa0639150;Name=Msa0639150
chr4_3 mRNA 34813099 34818707 34813099 ID=Msa0639150-mRNA-1;Parent=Msa0639150;Name=Msa0639150-mRNA-1;_AED=0.09;_eAED=0.09;_QI=139|1|1|1|0.88|0.8|10|259|417
chr4_3 exon 34813099 34813498 34813099 ID=Msa0639150-mRNA-1:exon:8170;Parent=Msa0639150-mRNA-1
chr4_3 exon 34814389 34814499 34814389 ID=Msa0639150-mRNA-1:exon:8169;Parent=Msa0639150-mRNA-1
chr4_3 exon 34814615 34814713 34814615 ID=Msa0639150-mRNA-1:exon:8168;Parent=Msa0639150-mRNA-1
chr4_3 exon 34814926 34815082 34814926 ID=Msa0639150-mRNA-1:exon:8167;Parent=Msa0639150-mRNA-1
chr4_3 exon 34815483 34815646 34815483 ID=Msa0639150-mRNA-1:exon:8166;Parent=Msa0639150-mRNA-1
chr4_3 exon 34815743 34815805 34815743 ID=Msa0639150-mRNA-1:exon:8165;Parent=Msa0639150-mRNA-1
chr4_3 exon 34815911 34816135 34815911 ID=Msa0639150-mRNA-1:exon:8164;Parent=Msa0639150-mRNA-1
chr4_3 exon 34817081 34817178 34817081 ID=Msa0639150-mRNA-1:exon:8163;Parent=Msa0639150-mRNA-1
chr4_3 exon 34818231 34818448 34818231 ID=Msa0639150-mRNA-1:exon:8162;Parent=Msa0639150-mRNA-1
chr4_3 exon 34818591 34818707 34818591 ID=Msa0639150-mRNA-1:exon:8161;Parent=Msa0639150-mRNA-1
chr4_3 five_prime_UTR 34818591 34818707 34818591 ID=Msa0639150-mRNA-1:five_prime_utr;Parent=Msa0639150-mRNA-1
chr4_3 five_prime_UTR 34818427 34818448 34818427 ID=Msa0639150-mRNA-1:five_prime_utr;Parent=Msa0639150-mRNA-1
chr4_3 CDS 34818231 34818426 34818231 ID=Msa0639150-mRNA-1:cds;Parent=Msa0639150-mRNA-1
chr4_3 CDS 34817081 34817178 34817081 ID=Msa0639150-mRNA-1:cds;Parent=Msa0639150-mRNA-1
chr4_3 CDS 34815911 34816135 34815911 ID=Msa0639150-mRNA-1:cds;Parent=Msa0639150-mRNA-1
chr4_3 CDS 34815743 34815805 34815743 ID=Msa0639150-mRNA-1:cds;Parent=Msa0639150-mRNA-1
chr4_3 CDS 34815483 34815646 34815483 ID=Msa0639150-mRNA-1:cds;Parent=Msa0639150-mRNA-1
chr4_3 CDS 34814926 34815082 34814926 ID=Msa0639150-mRNA-1:cds;Parent=Msa0639150-mRNA-1
chr4_3 CDS 34814615 34814713 34814615 ID=Msa0639150-mRNA-1:cds;Parent=Msa0639150-mRNA-1
chr4_3 CDS 34814389 34814499 34814389 ID=Msa0639150-mRNA-1:cds;Parent=Msa0639150-mRNA-1
chr4_3 CDS 34813358 34813498 34813358 ID=Msa0639150-mRNA-1:cds;Parent=Msa0639150-mRNA-1
chr4_3 three_prime_UTR 34813099 34813357 34813099 ID=Msa0639150-mRNA-1:three_prime_utr;Parent=Msa0639150-mRNA-1
Gene Sequence

>Msa0639150

ATGGCTGCCGTCGGAGTAGAAGTGAAGCATGCCGAGGGTGCACCGGAGGAGCATTGCTCTGCCAAACCAACCAAACAAGGGGAGGGTCTCCGTCAATACTATACTCAGCACATCCATGAGCTTCAGCTCCTTCACCGTCAAAAGAATCATAATCTTAACCGTCTCGAGGCGCAACGTAACGAGCTCAATTCCAGGGTGAGGATGCTTCGGGAAGAACTGCAGCTTCTTCAGGAGCCGGGTTCATATGTTGGCGAAGTTGTTAAAGTGATGGGCAAGAACAAAGTCTTGGTCAAGGTCCATCCAGAAGGGAAATATGTTGTTGATATTGATAAAAATATTGACATCACAAAGATTACACCATCTACTAGAGTTGCTCTTCGCAACGACAGTTATGTGCTTCATTTAGTTCTTCCAAGCAAAGTTGATCCATTGGTTAATCTGATGAAAGTTGAGAAAGTTCCTGATTCTACATATGACATGATTGGTGGTTTAGACCAACAAATCAAAGAAATAAAAGAGGTCATTGAGCTTCCAATTAAACATCCTGAGCTTTTTGAAAGTCTTGGAATAGCTCAACCAAAGGGTGTCTTGCTCTATGGGCCACCTGGTACAGGAAAAACATTGTTGGCTAGGGCAGTGGCACATCATACTGATTGTACATTCATCAGGGTGTCTGGTTCTGAACTTGTTCAGAAATACATTGGAGAAGGTTCTAGAATGGTTAGGGAACTTTTTGTTATGGCCAGGGAGCACGCTCCATCAATTATCTTCATGGACGAAATTGACAGTATTGGATCTGCTCGTATGGAATCTGGAAGTGGCAATGGTGATAGTGAAGTGCAGCGTACTATGTTGGAACTTCTCAACCAGTTGGATGGATTTGAAGCTTCCAATAAGATCAAGGTTTTGATGGCCACCAATCGGATTGATATCCTGGATCAAGCACTCCTGAGACCTGGACGGATTGACAGGAAGATTGAATTTCCAAATCCTAATGAAGAGTCTCGCCGAGATATCTTGAAAATCCATTCAAGAAGAATGAATTTAATGCGTGGTATTGACTTGAAGAAGATTGCTGAGAAGATGAATGGAGCATCTGGTGCTGAGCTTAAGGCTGTGTGCACTGAAGCTGGAATGTTTGCTCTGAGAGAGAGGAGGGTACATGTGACTCAGGAGGATTTTGAGATGGCCGTGGCCAAGGTGATGAAGAAGGAGACCGAGAAAAACATGTCATTGAGGAAGTTGTGGAAGTGA
Protein sequence

>Msa0639150

MAAVGVEVKHAEGAPEEHCSAKPTKQGEGLRQYYTQHIHELQLLHRQKNHNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKNIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRRDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKETEKNMSLRKLWK*