AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0641320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0641320 MtrunA17_Chr4g0025971 80.812 271 25 3 1 244 1 271 5.95e-153 426
Msa0641320 MtrunA17_Chr4g0026001 73.432 271 45 3 1 244 1 271 2.75e-141 396
Msa0641320 MtrunA17_Chr4g0025981 66.426 277 53 4 3 239 17 293 1.02e-122 352
Msa0641320 MtrunA17_Chr4g0044111 53.435 262 92 4 12 243 11 272 8.16e-84 251
Msa0641320 MtrunA17_Chr7g0266981 53.435 262 92 4 12 243 11 272 1.54e-83 250
Msa0641320 MtrunA17_Chr7g0266891 51.538 260 96 4 14 243 7 266 6.18e-78 236
Msa0641320 MtrunA17_Chr4g0044131 47.692 260 105 5 12 240 6 265 1.04e-67 210
Msa0641320 MtrunA17_Chr7g0268591 45.985 274 111 7 6 243 25 297 2.92e-64 202
Msa0641320 MtrunA17_Chr7g0244061 44.280 271 97 8 12 231 27 294 6.63e-64 201
Msa0641320 MtrunA17_Chr7g0267011 54.891 184 70 2 12 182 6 189 1.90e-61 191
Msa0641320 MtrunA17_Chr2g0324021 45.276 254 107 7 12 234 4 256 1.01e-59 189
Msa0641320 MtrunA17_Chr7g0252031 44.074 270 109 9 12 242 33 299 2.27e-59 189
Msa0641320 MtrunA17_Chr7g0270441 44.015 259 112 7 12 239 4 260 1.01e-58 187
Msa0641320 MtrunA17_Chr7g0267001 44.574 258 98 6 12 240 6 247 2.07e-58 186
Msa0641320 MtrunA17_Chr7g0270451 44.048 252 109 7 12 232 4 254 3.52e-58 185
Msa0641320 MtrunA17_Chr7g0266991 48.636 220 86 4 11 217 22 227 1.14e-57 183
Msa0641320 MtrunA17_Chr6g0459261 41.729 266 122 7 1 234 13 277 1.91e-57 184
Msa0641320 MtrunA17_Chr3g0084871 42.857 266 115 5 12 240 14 279 9.67e-53 172
Msa0641320 MtrunA17_Chr6g0459281 40.698 258 121 6 8 233 7 264 4.81e-52 170
Msa0641320 MtrunA17_Chr6g0459331 42.205 263 119 7 1 231 1 262 8.99e-52 169
Msa0641320 MtrunA17_Chr4g0040371 40.530 264 112 8 12 235 17 275 1.75e-51 169
Msa0641320 MtrunA17_Chr6g0459301 39.921 253 120 6 13 233 13 265 7.07e-51 167
Msa0641320 MtrunA17_Chr6g0459351 41.245 257 115 8 13 235 12 266 1.44e-49 163
Msa0641320 MtrunA17_Chr6g0459271 40.602 266 125 7 1 234 1 265 2.52e-49 162
Msa0641320 MtrunA17_Chr4g0044121 48.603 179 65 3 92 243 1 179 1.03e-44 148
Msa0641320 MtrunA17_Chr6g0463951 43.529 170 65 7 92 232 1 168 9.90e-28 104
Msa0641320 MtrunA17_Chr3g0122901 30.198 202 123 5 8 193 69 268 8.44e-24 97.4
Msa0641320 MtrunA17_Chr3g0142651 40.909 132 63 2 92 208 1 132 9.71e-24 92.8
Msa0641320 MtrunA17_Chr7g0270461 48.980 98 47 1 12 106 44 141 1.48e-23 92.8
Msa0641320 MtrunA17_Chr7g0270471 41.379 145 57 5 118 234 1 145 5.86e-23 91.3
Msa0641320 MtrunA17_Chr4g0028921 31.628 215 125 7 4 197 1 214 5.14e-21 89.0
Msa0641320 MtrunA17_Chr4g0028911 31.707 205 118 7 14 197 11 214 1.39e-19 85.1
Msa0641320 MtrunA17_Chr1g0191751 33.659 205 111 6 13 195 100 301 2.45e-17 80.1
Msa0641320 MtrunA17_Chr4g0074511 31.373 204 114 7 9 189 35 235 1.14e-15 74.7
Msa0641320 MtrunA17_Chr1g0171831 28.910 211 123 7 11 195 11 220 6.72e-15 72.0
Msa0641320 MtrunA17_Chr7g0259521 28.440 218 118 9 1 195 1 203 1.80e-14 70.9
Msa0641320 MtrunA17_Chr4g0045041 30.041 243 135 8 16 226 6 245 2.99e-14 71.6
Msa0641320 MtrunA17_Chr0c30g0494101 30.732 205 112 8 9 189 35 233 4.73e-14 70.1
Msa0641320 MtrunA17_Chr7g0272961 28.780 205 119 7 13 194 39 239 5.26e-14 70.1
Msa0641320 MtrunA17_Chr4g0045061 29.167 240 141 7 16 226 6 245 5.53e-13 68.2
Msa0641320 MtrunA17_Chr8g0386171 32.432 148 87 4 14 152 52 195 2.47e-12 65.9
Msa0641320 MtrunA17_Chr3g0112151 26.667 255 154 9 14 237 86 338 1.71e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0641320 AT3G51680.1 45.113 266 100 8 12 231 30 295 2.31e-63 200
Msa0641320 AT3G26760.1 40.909 264 117 7 6 231 28 290 5.71e-59 189
Msa0641320 AT2G47140.1 43.651 252 110 7 12 232 4 254 3.34e-58 185
Msa0641320 AT3G26770.1 43.359 256 108 6 12 231 39 293 2.36e-57 185
Msa0641320 AT1G52340.1 43.704 270 110 7 12 240 16 284 5.87e-56 181
Msa0641320 AT2G47130.1 42.800 250 112 7 13 232 5 253 2.17e-55 178
Msa0641320 AT4G03140.1 45.098 255 104 6 12 231 76 329 4.87e-55 180
Msa0641320 AT3G29250.2 42.460 252 111 8 13 232 5 254 4.58e-54 175
Msa0641320 AT3G29250.3 42.460 252 111 8 13 232 41 290 1.30e-53 175
Msa0641320 AT3G29250.1 42.353 255 112 9 11 232 40 292 8.37e-53 173
Msa0641320 AT2G47120.2 40.873 252 117 8 11 232 4 253 1.12e-51 169
Msa0641320 AT2G47120.1 40.800 250 116 8 13 232 5 252 4.13e-51 167
Msa0641320 AT3G29260.1 40.637 251 118 7 12 232 4 253 9.13e-51 166
Msa0641320 AT3G42960.1 37.546 269 124 8 7 235 1 265 1.39e-41 143
Msa0641320 AT1G24360.1 28.458 253 150 8 9 232 69 319 2.64e-22 93.6
Msa0641320 AT3G55290.1 34.146 205 111 8 13 195 17 219 3.99e-21 89.7
Msa0641320 AT3G55290.2 34.146 205 111 8 13 195 16 218 4.35e-21 89.7
Msa0641320 AT1G63380.3 32.843 204 114 7 14 195 15 217 8.28e-20 86.3
Msa0641320 AT1G63380.1 32.843 204 114 7 14 195 17 219 9.24e-20 86.3
Msa0641320 AT1G63380.2 32.843 204 114 7 14 195 22 224 1.10e-19 86.3
Msa0641320 AT1G63380.4 32.843 204 114 7 14 195 19 221 1.11e-19 85.9
Msa0641320 AT1G62610.2 31.373 204 117 7 14 195 13 215 3.31e-19 84.7
Msa0641320 AT1G62610.1 31.373 204 117 7 14 195 14 216 3.60e-19 84.3
Msa0641320 AT1G62610.3 31.373 204 117 7 14 195 15 217 3.77e-19 84.3
Msa0641320 AT1G62610.4 31.373 204 117 7 14 195 19 221 4.20e-19 84.3
Msa0641320 AT3G46170.1 29.961 257 141 10 13 232 25 279 5.25e-19 84.3
Msa0641320 AT2G17845.1 29.457 258 142 9 14 232 47 303 8.16e-19 84.0
Msa0641320 AT3G55310.1 34.896 192 101 8 13 182 16 205 4.30e-18 81.6
Msa0641320 AT2G47150.1 29.565 230 117 7 14 232 1 196 1.59e-17 78.6
Msa0641320 AT2G30670.1 27.711 249 148 6 14 232 7 253 2.33e-16 76.6
Msa0641320 AT1G54870.2 31.863 204 114 7 13 194 83 283 2.63e-15 74.3
Msa0641320 AT1G54870.1 31.863 204 114 7 13 194 81 281 2.83e-15 74.3
Msa0641320 AT1G10310.1 30.052 193 119 5 16 194 17 207 1.27e-14 71.2
Msa0641320 AT5G18210.2 28.794 257 151 8 7 236 1 252 4.56e-14 70.5
Msa0641320 AT3G05260.1 29.412 204 118 6 13 194 36 235 4.59e-14 70.5
Msa0641320 AT5G18210.1 28.293 205 125 4 7 189 1 205 1.28e-13 68.9
Msa0641320 AT2G29340.2 26.104 249 152 6 14 232 7 253 1.83e-13 68.6
Msa0641320 AT2G29340.1 26.104 249 152 6 14 232 7 253 2.54e-13 68.6
Msa0641320 AT1G49670.2 31.658 199 111 7 16 189 6 204 7.78e-13 68.2
Msa0641320 AT1G49670.1 31.658 199 111 7 16 189 6 204 9.01e-13 67.8
Msa0641320 AT5G06060.1 26.400 250 150 8 14 232 9 255 1.39e-12 65.9
Msa0641320 AT5G50770.1 32.353 204 120 8 16 203 47 248 1.47e-12 66.6
Msa0641320 AT2G29340.3 28.646 192 119 4 14 189 7 196 2.63e-12 64.3
Msa0641320 AT2G29340.4 28.646 192 119 4 14 189 7 196 2.63e-12 64.3
Msa0641320 AT4G13180.1 30.476 210 122 7 1 189 1 207 6.96e-12 63.9
Msa0641320 AT1G07450.1 25.703 249 152 6 14 232 8 253 7.98e-12 63.9
Msa0641320 AT5G65205.1 31.351 185 102 8 15 182 7 183 1.00e-11 63.9
Msa0641320 AT2G29290.2 24.498 249 156 6 14 232 7 253 1.18e-11 63.5
Msa0641320 AT2G29370.1 24.900 249 155 6 14 232 16 262 1.55e-11 63.2
Msa0641320 AT2G29300.1 27.092 251 148 8 14 232 7 254 5.77e-11 61.2
Msa0641320 AT3G47350.2 28.000 200 117 7 16 195 46 238 6.55e-11 61.6
Msa0641320 AT2G29330.1 24.303 251 154 7 14 232 7 253 8.44e-11 60.8
Msa0641320 AT1G07440.1 24.597 248 156 6 14 232 12 257 8.62e-11 60.8
Msa0641320 AT3G47350.1 28.000 200 117 7 16 195 46 238 8.82e-11 61.2

Find 77 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGCTTGGGGCTTTATTTAA+TGG 0.186274 4_3:-41688675 Msa0641320:five_prime_UTR
TTATTATGTAGTTGCCTTCT+TGG 0.206309 4_3:+41688735 None:intergenic
TCATTAATTGTGTCGGTAAA+TGG 0.208361 4_3:-41688832 None:intergenic
AGCTTGGGCCATTTGGTATT+CGG 0.232114 4_3:-41687323 Msa0641320:CDS
GCAGCTTCAGCCACATCTTT+TGG 0.275458 4_3:+41687186 None:intergenic
AACTTGACTGGCGTCTTTCT+TGG 0.291159 4_3:-41687598 Msa0641320:CDS
ACAAATTTCTTTAAGCTTGA+TGG 0.305258 4_3:-41687258 Msa0641320:CDS
TTTAATCACATCTTCAAATT+CGG 0.341039 4_3:+41687624 None:intergenic
GATGTTTATTCTAACCTAAA+AGG 0.341199 4_3:-41687222 Msa0641320:CDS
GCTTGGGCCATTTGGTATTC+GGG 0.360522 4_3:-41687322 Msa0641320:CDS
GATATCTAGTTTACCGTACT+TGG 0.373680 4_3:+41687708 None:intergenic
GCCATCGAGCTTGGGCCATT+TGG 0.385176 4_3:-41687330 Msa0641320:intron
TTCTTTAAGCTTGATGGTGG+TGG 0.385481 4_3:-41687252 Msa0641320:CDS
TCTTTAAGCTTGATGGTGGT+GGG 0.398255 4_3:-41687251 Msa0641320:CDS
AACTTGTTTATACCTTCTTA+AGG 0.408475 4_3:+41688541 None:intergenic
ACCGGTGGTGCGAGCGGCAT+CGG 0.434462 4_3:-41687904 Msa0641320:CDS
TTAAAGAAATTTGTAACCAT+TGG 0.434965 4_3:+41687267 None:intergenic
ATTAACACGGCTAGTGTTTG+TGG 0.440870 4_3:-41687526 Msa0641320:CDS
GGTCATAATCTTGTCATAGA+TGG 0.443612 4_3:-41687128 Msa0641320:CDS
GGGAAGGTGGCTCTGATCAC+CGG 0.449053 4_3:-41687922 Msa0641320:CDS
GTAGTTGCCTTCTTGGACCG+TGG 0.456431 4_3:+41688742 None:intergenic
GGTTATGATCCCCGCTCGAC+GGG 0.465924 4_3:-41687557 Msa0641320:CDS
AACGACTTGAGCTCCTTGCT+TGG 0.474776 4_3:+41687858 None:intergenic
TGTAGAGAAATATAGTTGTA+TGG 0.479390 4_3:+41688618 None:intergenic
ATTTACAAGGCTTGAGGGGA+AGG 0.480148 4_3:-41687938 Msa0641320:intron
AATTCATTTACAAGGCTTGA+GGG 0.492849 4_3:-41687943 Msa0641320:intron
ACCGATGCCGCTCGCACCAC+CGG 0.493419 4_3:+41687903 None:intergenic
CACAATGGCAACCGTTCCAT+TGG 0.495090 4_3:-41688573 Msa0641320:exon
ATTATGCTACCCCGTCGAGC+GGG 0.496710 4_3:+41687547 None:intergenic
ATTGGAGTCGCAAGAACATA+AGG 0.499291 4_3:+41687285 None:intergenic
AGTGTTTGTGGAAGCATTGG+TGG 0.502765 4_3:-41687514 Msa0641320:CDS
AACACAACCGTTTCCAAGTA+CGG 0.503973 4_3:-41687721 Msa0641320:intron
TAGTTTACCGTACTTGGAAA+CGG 0.505519 4_3:+41687714 None:intergenic
CGATGCAATAAGATAGTTGA+AGG 0.516744 4_3:-41688651 Msa0641320:five_prime_UTR
TTAAGTTCCGTGTGTTCCCA+CGG 0.521155 4_3:-41688759 Msa0641320:five_prime_UTR
GGGTTATGATCCCCGCTCGA+CGG 0.522021 4_3:-41687558 Msa0641320:CDS
CAATTCACCCGAATACCAAA+TGG 0.524070 4_3:+41687315 None:intergenic
GTGATTAAAGTAAACTTGAC+TGG 0.532400 4_3:-41687610 Msa0641320:CDS
TTGGAACAAAGCATGCATCA+AGG 0.537428 4_3:-41687579 Msa0641320:CDS
GAATTCATTTACAAGGCTTG+AGG 0.537823 4_3:-41687944 Msa0641320:intron
GTGATGAGTCAGTATGTTAG+TGG 0.544735 4_3:-41687149 Msa0641320:intron
TTATGTTCTTGCGACTCCAA+TGG 0.545527 4_3:-41687283 Msa0641320:CDS
CTTTAAGCTTGATGGTGGTG+GGG 0.546290 4_3:-41687250 Msa0641320:CDS
TAATTGTGTCGGTAAATGGC+TGG 0.546386 4_3:-41688828 None:intergenic
CATAATCTTGTCATAGATGG+TGG 0.557524 4_3:-41687125 Msa0641320:CDS
TAATAAGTCAACACCAACCT+TGG 0.559116 4_3:-41688718 Msa0641320:five_prime_UTR
CTTAAGGTATTAGAGACCAA+TGG 0.562859 4_3:+41688557 None:intergenic
TGGAACAAAGCATGCATCAA+GGG 0.564084 4_3:-41687578 Msa0641320:CDS
CTGATCACCGGTGGTGCGAG+CGG 0.567749 4_3:-41687910 Msa0641320:CDS
TGTCACGTCACAGCGAACAT+AGG 0.574891 4_3:+41687771 None:intergenic
AATTTCTTTAAGCTTGATGG+TGG 0.575513 4_3:-41687255 Msa0641320:CDS
TGGTCTCTAATACCTTAAGA+AGG 0.576031 4_3:-41688553 Msa0641320:intron
TCTTGGACCGTGGGAACACA+CGG 0.576323 4_3:+41688752 None:intergenic
GCAAGACTCTTCTCCAAGCA+AGG 0.577004 4_3:-41687871 Msa0641320:CDS
TAGTTGCCTTCTTGGACCGT+GGG 0.579051 4_3:+41688743 None:intergenic
ATAGATGGTGGATTCAGCGT+TGG 0.581417 4_3:-41687113 Msa0641320:CDS
CTTGGAGAAGAGTCTTGCAG+TGG 0.582876 4_3:+41687876 None:intergenic
TACAAGGCTTGAGGGGAAGG+TGG 0.585321 4_3:-41687935 Msa0641320:intron
GATATCATGTTTAACAACGC+TGG 0.588151 4_3:-41687691 Msa0641320:CDS
GCTAGTGTTTGTGGAAGCAT+TGG 0.592012 4_3:-41687517 Msa0641320:CDS
TGTGTTCCCACGGTCCAAGA+AGG 0.597636 4_3:-41688749 Msa0641320:five_prime_UTR
TTATGCTACCCCGTCGAGCG+GGG 0.597671 4_3:+41687548 None:intergenic
GGATTCAGCGTTGGAAACAG+TGG 0.601129 4_3:-41687104 Msa0641320:CDS
TTTAACAACGCTGGCATAAG+CGG 0.605608 4_3:-41687682 Msa0641320:CDS
TGTTCGCTGTGACGTGACAA+AGG 0.613627 4_3:-41687767 Msa0641320:CDS
ACAGCGAACATAGGAAGAAG+AGG 0.628803 4_3:+41687780 None:intergenic
GGTATTAGAGACCAATGGAA+CGG 0.634106 4_3:+41688562 None:intergenic
TGGTGCGAGCGGCATCGGTG+AGG 0.642225 4_3:-41687899 Msa0641320:CDS
ATTCATTTACAAGGCTTGAG+GGG 0.651199 4_3:-41687942 Msa0641320:intron
AAGGTGGCTCTGATCACCGG+TGG 0.652302 4_3:-41687919 Msa0641320:CDS
GGCGTGCTTTGAACATGTGT+AGG 0.653457 4_3:+41687477 None:intergenic
GTTATGATCCCCGCTCGACG+GGG 0.674081 4_3:-41687556 Msa0641320:CDS
AATTATGCTACCCCGTCGAG+CGG 0.674229 4_3:+41687546 None:intergenic
GCTGACATTCAAGACGACAA+AGG 0.674329 4_3:-41687832 Msa0641320:CDS
GAAACTTGAAAAGCTCACAA+TGG 0.683281 4_3:-41688588 Msa0641320:exon
TTTGAACATGTGTAGGCATG+TGG 0.689803 4_3:+41687484 None:intergenic
ACGGGGTAGCATAATTAACA+CGG 0.731747 4_3:-41687539 Msa0641320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTAAAAATTAAACATG+TGG - chr4_3:41687109-41687128 Msa0641320:CDS 10.0%
!!! ATATTTTTTTATAACCTATA+AGG + chr4_3:41687584-41687603 None:intergenic 10.0%
!!! ATTTTTAAAAATTAAACATG+TGG - chr4_3:41687109-41687128 Msa0641320:CDS 10.0%
!!! ATATTTTTTTATAACCTATA+AGG + chr4_3:41687584-41687603 None:intergenic 10.0%
!! TACACAAAATAAATGAAATA+AGG + chr4_3:41687388-41687407 None:intergenic 15.0%
!!! ATTTATTTTGTGTATATGAA+TGG - chr4_3:41687394-41687413 Msa0641320:intron 15.0%
!! GATTTATGAAAAAATATAAG+TGG - chr4_3:41687478-41687497 Msa0641320:CDS 15.0%
!!! TTATTTTACTTAAATTTGTG+TGG + chr4_3:41687527-41687546 None:intergenic 15.0%
!!! ATTTTATATAATAAGCACAA+TGG - chr4_3:41687833-41687852 Msa0641320:CDS 15.0%
!!! TTTTATATAATAAGCACAAT+GGG - chr4_3:41687834-41687853 Msa0641320:CDS 15.0%
!! TACACAAAATAAATGAAATA+AGG + chr4_3:41687388-41687407 None:intergenic 15.0%
!!! ATTTATTTTGTGTATATGAA+TGG - chr4_3:41687394-41687413 Msa0641320:intron 15.0%
!! GATTTATGAAAAAATATAAG+TGG - chr4_3:41687478-41687497 Msa0641320:CDS 15.0%
!!! TTATTTTACTTAAATTTGTG+TGG + chr4_3:41687527-41687546 None:intergenic 15.0%
!!! ATTTTATATAATAAGCACAA+TGG - chr4_3:41687833-41687852 Msa0641320:CDS 15.0%
!!! TTTTATATAATAAGCACAAT+GGG - chr4_3:41687834-41687853 Msa0641320:CDS 15.0%
!! TTAGAAAAATGATTAAAGCT+TGG - chr4_3:41687204-41687223 Msa0641320:CDS 20.0%
!! TAGAAAAATGATTAAAGCTT+GGG - chr4_3:41687205-41687224 Msa0641320:CDS 20.0%
!! CATAAATCGTATATTTATGT+AGG + chr4_3:41687466-41687485 None:intergenic 20.0%
!!! GATAGATGACTTTTTAAAAA+GGG + chr4_3:41687684-41687703 None:intergenic 20.0%
!!! TGATAGATGACTTTTTAAAA+AGG + chr4_3:41687685-41687704 None:intergenic 20.0%
!! TTTAATCACATCTTCAAATT+CGG + chr4_3:41688273-41688292 None:intergenic 20.0%
!! TTAAAGAAATTTGTAACCAT+TGG + chr4_3:41688630-41688649 None:intergenic 20.0%
!! TTAGAAAAATGATTAAAGCT+TGG - chr4_3:41687204-41687223 Msa0641320:CDS 20.0%
!! TAGAAAAATGATTAAAGCTT+GGG - chr4_3:41687205-41687224 Msa0641320:CDS 20.0%
!! CATAAATCGTATATTTATGT+AGG + chr4_3:41687466-41687485 None:intergenic 20.0%
!!! GATAGATGACTTTTTAAAAA+GGG + chr4_3:41687684-41687703 None:intergenic 20.0%
!!! TGATAGATGACTTTTTAAAA+AGG + chr4_3:41687685-41687704 None:intergenic 20.0%
!! TTTAATCACATCTTCAAATT+CGG + chr4_3:41688273-41688292 None:intergenic 20.0%
!! TTAAAGAAATTTGTAACCAT+TGG + chr4_3:41688630-41688649 None:intergenic 20.0%
! AGAAAAATGATTAAAGCTTG+GGG - chr4_3:41687206-41687225 Msa0641320:CDS 25.0%
! TGTAGAGAAATATAGTTGTA+TGG + chr4_3:41687279-41687298 None:intergenic 25.0%
!! AACTTGTTTATACCTTCTTA+AGG + chr4_3:41687356-41687375 None:intergenic 25.0%
!! CGTATATTTATGTAGGATTT+TGG + chr4_3:41687459-41687478 None:intergenic 25.0%
! AAATATAAGTGGACATTTGA+AGG - chr4_3:41687489-41687508 Msa0641320:CDS 25.0%
! TTGAAAAATGAGAATCTGAA+GGG + chr4_3:41687766-41687785 None:intergenic 25.0%
! TTTGAAAAATGAGAATCTGA+AGG + chr4_3:41687767-41687786 None:intergenic 25.0%
! AACTTCATTACAGTTCTATA+AGG + chr4_3:41687904-41687923 None:intergenic 25.0%
! ACAAATTTCTTTAAGCTTGA+TGG - chr4_3:41688636-41688655 Msa0641320:five_prime_UTR 25.0%
! GATGTTTATTCTAACCTAAA+AGG - chr4_3:41688672-41688691 Msa0641320:five_prime_UTR 25.0%
!! TAATTTTATGCCAAAAGATG+TGG - chr4_3:41688698-41688717 Msa0641320:five_prime_UTR 25.0%
! AGAAAAATGATTAAAGCTTG+GGG - chr4_3:41687206-41687225 Msa0641320:CDS 25.0%
! TGTAGAGAAATATAGTTGTA+TGG + chr4_3:41687279-41687298 None:intergenic 25.0%
!! AACTTGTTTATACCTTCTTA+AGG + chr4_3:41687356-41687375 None:intergenic 25.0%
!! CGTATATTTATGTAGGATTT+TGG + chr4_3:41687459-41687478 None:intergenic 25.0%
! AAATATAAGTGGACATTTGA+AGG - chr4_3:41687489-41687508 Msa0641320:CDS 25.0%
! TTGAAAAATGAGAATCTGAA+GGG + chr4_3:41687766-41687785 None:intergenic 25.0%
! TTTGAAAAATGAGAATCTGA+AGG + chr4_3:41687767-41687786 None:intergenic 25.0%
! AACTTCATTACAGTTCTATA+AGG + chr4_3:41687904-41687923 None:intergenic 25.0%
! ACAAATTTCTTTAAGCTTGA+TGG - chr4_3:41688636-41688655 Msa0641320:five_prime_UTR 25.0%
! GATGTTTATTCTAACCTAAA+AGG - chr4_3:41688672-41688691 Msa0641320:five_prime_UTR 25.0%
!! TAATTTTATGCCAAAAGATG+TGG - chr4_3:41688698-41688717 Msa0641320:five_prime_UTR 25.0%
TTATTATGTAGTTGCCTTCT+TGG + chr4_3:41687162-41687181 None:intergenic 30.0%
!! TCATTTTTCTAACAGTACCA+AGG + chr4_3:41687196-41687215 None:intergenic 30.0%
GAGATAATCACAGATTAAGT+TGG + chr4_3:41687437-41687456 None:intergenic 30.0%
AATGAATTCAGCATGACAAA+TGG + chr4_3:41687939-41687958 None:intergenic 30.0%
TCATGCTGAATTCATTTACA+AGG - chr4_3:41687943-41687962 Msa0641320:intron 30.0%
AATTCATTTACAAGGCTTGA+GGG - chr4_3:41687951-41687970 Msa0641320:intron 30.0%
GTGATTAAAGTAAACTTGAC+TGG - chr4_3:41688284-41688303 Msa0641320:intron 30.0%
AATTTCTTTAAGCTTGATGG+TGG - chr4_3:41688639-41688658 Msa0641320:five_prime_UTR 30.0%
! GCATAAAATTAGCACCTTTT+AGG + chr4_3:41688689-41688708 None:intergenic 30.0%
TTATTATGTAGTTGCCTTCT+TGG + chr4_3:41687162-41687181 None:intergenic 30.0%
!! TCATTTTTCTAACAGTACCA+AGG + chr4_3:41687196-41687215 None:intergenic 30.0%
GAGATAATCACAGATTAAGT+TGG + chr4_3:41687437-41687456 None:intergenic 30.0%
AATGAATTCAGCATGACAAA+TGG + chr4_3:41687939-41687958 None:intergenic 30.0%
TCATGCTGAATTCATTTACA+AGG - chr4_3:41687943-41687962 Msa0641320:intron 30.0%
AATTCATTTACAAGGCTTGA+GGG - chr4_3:41687951-41687970 Msa0641320:intron 30.0%
GTGATTAAAGTAAACTTGAC+TGG - chr4_3:41688284-41688303 Msa0641320:intron 30.0%
AATTTCTTTAAGCTTGATGG+TGG - chr4_3:41688639-41688658 Msa0641320:five_prime_UTR 30.0%
! GCATAAAATTAGCACCTTTT+AGG + chr4_3:41688689-41688708 None:intergenic 30.0%
TAATAAGTCAACACCAACCT+TGG - chr4_3:41687176-41687195 Msa0641320:intron 35.0%
! TTTTCTAACAGTACCAAGGT+TGG + chr4_3:41687192-41687211 None:intergenic 35.0%
!! AAGCTTGGGGCTTTATTTAA+TGG - chr4_3:41687219-41687238 Msa0641320:CDS 35.0%
CGATGCAATAAGATAGTTGA+AGG - chr4_3:41687243-41687262 Msa0641320:CDS 35.0%
!!! TTGTGAGCTTTTCAAGTTTC+TGG + chr4_3:41687306-41687325 None:intergenic 35.0%
GAAACTTGAAAAGCTCACAA+TGG - chr4_3:41687306-41687325 Msa0641320:CDS 35.0%
! CTTAAGGTATTAGAGACCAA+TGG + chr4_3:41687340-41687359 None:intergenic 35.0%
TGGTCTCTAATACCTTAAGA+AGG - chr4_3:41687341-41687360 Msa0641320:intron 35.0%
CCTATAAGGCTATAACAAAC+TGG + chr4_3:41687570-41687589 None:intergenic 35.0%
!! CCAGTTTGTTATAGCCTTAT+AGG - chr4_3:41687567-41687586 Msa0641320:CDS 35.0%
GAATTCATTTACAAGGCTTG+AGG - chr4_3:41687950-41687969 Msa0641320:intron 35.0%
ATTCATTTACAAGGCTTGAG+GGG - chr4_3:41687952-41687971 Msa0641320:intron 35.0%
TAGTTTACCGTACTTGGAAA+CGG + chr4_3:41688183-41688202 None:intergenic 35.0%
! GATATCTAGTTTACCGTACT+TGG + chr4_3:41688189-41688208 None:intergenic 35.0%
GATATCATGTTTAACAACGC+TGG - chr4_3:41688203-41688222 Msa0641320:intron 35.0%
GGTCATAATCTTGTCATAGA+TGG - chr4_3:41688766-41688785 Msa0641320:five_prime_UTR 35.0%
CATAATCTTGTCATAGATGG+TGG - chr4_3:41688769-41688788 Msa0641320:five_prime_UTR 35.0%
TAATAAGTCAACACCAACCT+TGG - chr4_3:41687176-41687195 Msa0641320:intron 35.0%
! TTTTCTAACAGTACCAAGGT+TGG + chr4_3:41687192-41687211 None:intergenic 35.0%
!! AAGCTTGGGGCTTTATTTAA+TGG - chr4_3:41687219-41687238 Msa0641320:CDS 35.0%
CGATGCAATAAGATAGTTGA+AGG - chr4_3:41687243-41687262 Msa0641320:CDS 35.0%
!!! TTGTGAGCTTTTCAAGTTTC+TGG + chr4_3:41687306-41687325 None:intergenic 35.0%
GAAACTTGAAAAGCTCACAA+TGG - chr4_3:41687306-41687325 Msa0641320:CDS 35.0%
! CTTAAGGTATTAGAGACCAA+TGG + chr4_3:41687340-41687359 None:intergenic 35.0%
TGGTCTCTAATACCTTAAGA+AGG - chr4_3:41687341-41687360 Msa0641320:intron 35.0%
CCTATAAGGCTATAACAAAC+TGG + chr4_3:41687570-41687589 None:intergenic 35.0%
!! CCAGTTTGTTATAGCCTTAT+AGG - chr4_3:41687567-41687586 Msa0641320:CDS 35.0%
GAATTCATTTACAAGGCTTG+AGG - chr4_3:41687950-41687969 Msa0641320:intron 35.0%
ATTCATTTACAAGGCTTGAG+GGG - chr4_3:41687952-41687971 Msa0641320:intron 35.0%
TAGTTTACCGTACTTGGAAA+CGG + chr4_3:41688183-41688202 None:intergenic 35.0%
! GATATCTAGTTTACCGTACT+TGG + chr4_3:41688189-41688208 None:intergenic 35.0%
GATATCATGTTTAACAACGC+TGG - chr4_3:41688203-41688222 Msa0641320:intron 35.0%
GGTCATAATCTTGTCATAGA+TGG - chr4_3:41688766-41688785 Msa0641320:five_prime_UTR 35.0%
CATAATCTTGTCATAGATGG+TGG - chr4_3:41688769-41688788 Msa0641320:five_prime_UTR 35.0%
GGTATTAGAGACCAATGGAA+CGG + chr4_3:41687335-41687354 None:intergenic 40.0%
AACACAACCGTTTCCAAGTA+CGG - chr4_3:41688173-41688192 Msa0641320:intron 40.0%
TTTAACAACGCTGGCATAAG+CGG - chr4_3:41688212-41688231 Msa0641320:intron 40.0%
TTGGAACAAAGCATGCATCA+AGG - chr4_3:41688315-41688334 Msa0641320:intron 40.0%
TGGAACAAAGCATGCATCAA+GGG - chr4_3:41688316-41688335 Msa0641320:intron 40.0%
ACGGGGTAGCATAATTAACA+CGG - chr4_3:41688355-41688374 Msa0641320:intron 40.0%
ATTAACACGGCTAGTGTTTG+TGG - chr4_3:41688368-41688387 Msa0641320:intron 40.0%
TTTGAACATGTGTAGGCATG+TGG + chr4_3:41688413-41688432 None:intergenic 40.0%
CAATTCACCCGAATACCAAA+TGG + chr4_3:41688582-41688601 None:intergenic 40.0%
ATTGGAGTCGCAAGAACATA+AGG + chr4_3:41688612-41688631 None:intergenic 40.0%
TTATGTTCTTGCGACTCCAA+TGG - chr4_3:41688611-41688630 Msa0641320:five_prime_UTR 40.0%
!! TTCTTTAAGCTTGATGGTGG+TGG - chr4_3:41688642-41688661 Msa0641320:five_prime_UTR 40.0%
!! TCTTTAAGCTTGATGGTGGT+GGG - chr4_3:41688643-41688662 Msa0641320:five_prime_UTR 40.0%
GTGATGAGTCAGTATGTTAG+TGG - chr4_3:41688745-41688764 Msa0641320:five_prime_UTR 40.0%
GTGTTTGATCAATCTCTCTG+AGG - chr4_3:41688820-41688839 Msa0641320:five_prime_UTR 40.0%
GGTATTAGAGACCAATGGAA+CGG + chr4_3:41687335-41687354 None:intergenic 40.0%
AACACAACCGTTTCCAAGTA+CGG - chr4_3:41688173-41688192 Msa0641320:intron 40.0%
TTTAACAACGCTGGCATAAG+CGG - chr4_3:41688212-41688231 Msa0641320:intron 40.0%
TTGGAACAAAGCATGCATCA+AGG - chr4_3:41688315-41688334 Msa0641320:intron 40.0%
TGGAACAAAGCATGCATCAA+GGG - chr4_3:41688316-41688335 Msa0641320:intron 40.0%
ACGGGGTAGCATAATTAACA+CGG - chr4_3:41688355-41688374 Msa0641320:intron 40.0%
ATTAACACGGCTAGTGTTTG+TGG - chr4_3:41688368-41688387 Msa0641320:intron 40.0%
TTTGAACATGTGTAGGCATG+TGG + chr4_3:41688413-41688432 None:intergenic 40.0%
CAATTCACCCGAATACCAAA+TGG + chr4_3:41688582-41688601 None:intergenic 40.0%
ATTGGAGTCGCAAGAACATA+AGG + chr4_3:41688612-41688631 None:intergenic 40.0%
TTATGTTCTTGCGACTCCAA+TGG - chr4_3:41688611-41688630 Msa0641320:five_prime_UTR 40.0%
!! TTCTTTAAGCTTGATGGTGG+TGG - chr4_3:41688642-41688661 Msa0641320:five_prime_UTR 40.0%
!! TCTTTAAGCTTGATGGTGGT+GGG - chr4_3:41688643-41688662 Msa0641320:five_prime_UTR 40.0%
GTGATGAGTCAGTATGTTAG+TGG - chr4_3:41688745-41688764 Msa0641320:five_prime_UTR 40.0%
TTAAGTTCCGTGTGTTCCCA+CGG - chr4_3:41687135-41687154 Msa0641320:CDS 45.0%
ATTTACAAGGCTTGAGGGGA+AGG - chr4_3:41687956-41687975 Msa0641320:intron 45.0%
GCTGACATTCAAGACGACAA+AGG - chr4_3:41688062-41688081 Msa0641320:intron 45.0%
ACAGCGAACATAGGAAGAAG+AGG + chr4_3:41688117-41688136 None:intergenic 45.0%
AACTTGACTGGCGTCTTTCT+TGG - chr4_3:41688296-41688315 Msa0641320:intron 45.0%
! GCTAGTGTTTGTGGAAGCAT+TGG - chr4_3:41688377-41688396 Msa0641320:intron 45.0%
!! AGTGTTTGTGGAAGCATTGG+TGG - chr4_3:41688380-41688399 Msa0641320:intron 45.0%
AGCTTGGGCCATTTGGTATT+CGG - chr4_3:41688571-41688590 Msa0641320:CDS 45.0%
!! CTTTAAGCTTGATGGTGGTG+GGG - chr4_3:41688644-41688663 Msa0641320:five_prime_UTR 45.0%
GCTGAAGCTGCTCTTTACTT+GGG - chr4_3:41688720-41688739 Msa0641320:five_prime_UTR 45.0%
!! ATAGATGGTGGATTCAGCGT+TGG - chr4_3:41688781-41688800 Msa0641320:five_prime_UTR 45.0%
TTAAGTTCCGTGTGTTCCCA+CGG - chr4_3:41687135-41687154 Msa0641320:CDS 45.0%
ATTTACAAGGCTTGAGGGGA+AGG - chr4_3:41687956-41687975 Msa0641320:intron 45.0%
GCTGACATTCAAGACGACAA+AGG - chr4_3:41688062-41688081 Msa0641320:intron 45.0%
ACAGCGAACATAGGAAGAAG+AGG + chr4_3:41688117-41688136 None:intergenic 45.0%
AACTTGACTGGCGTCTTTCT+TGG - chr4_3:41688296-41688315 Msa0641320:intron 45.0%
! GCTAGTGTTTGTGGAAGCAT+TGG - chr4_3:41688377-41688396 Msa0641320:intron 45.0%
!! AGTGTTTGTGGAAGCATTGG+TGG - chr4_3:41688380-41688399 Msa0641320:intron 45.0%
AGCTTGGGCCATTTGGTATT+CGG - chr4_3:41688571-41688590 Msa0641320:CDS 45.0%
!! CTTTAAGCTTGATGGTGGTG+GGG - chr4_3:41688644-41688663 Msa0641320:five_prime_UTR 45.0%
GCTGAAGCTGCTCTTTACTT+GGG - chr4_3:41688720-41688739 Msa0641320:five_prime_UTR 45.0%
!! ATAGATGGTGGATTCAGCGT+TGG - chr4_3:41688781-41688800 Msa0641320:five_prime_UTR 45.0%
TAGTTGCCTTCTTGGACCGT+GGG + chr4_3:41687154-41687173 None:intergenic 50.0%
CACAATGGCAACCGTTCCAT+TGG - chr4_3:41687321-41687340 Msa0641320:CDS 50.0%
CTTGGAGAAGAGTCTTGCAG+TGG + chr4_3:41688021-41688040 None:intergenic 50.0%
GCAAGACTCTTCTCCAAGCA+AGG - chr4_3:41688023-41688042 Msa0641320:intron 50.0%
AACGACTTGAGCTCCTTGCT+TGG + chr4_3:41688039-41688058 None:intergenic 50.0%
TGTCACGTCACAGCGAACAT+AGG + chr4_3:41688126-41688145 None:intergenic 50.0%
TGTTCGCTGTGACGTGACAA+AGG - chr4_3:41688127-41688146 Msa0641320:intron 50.0%
AATTATGCTACCCCGTCGAG+CGG + chr4_3:41688351-41688370 None:intergenic 50.0%
! GGCGTGCTTTGAACATGTGT+AGG + chr4_3:41688420-41688439 None:intergenic 50.0%
TGTTCAAAGCACGCCGTTGT+TGG - chr4_3:41688425-41688444 Msa0641320:intron 50.0%
GTTCAAAGCACGCCGTTGTT+GGG - chr4_3:41688426-41688445 Msa0641320:intron 50.0%
AGAAACACAGCCATCGAGCT+TGG - chr4_3:41688555-41688574 Msa0641320:CDS 50.0%
GAAACACAGCCATCGAGCTT+GGG - chr4_3:41688556-41688575 Msa0641320:CDS 50.0%
GCTTGGGCCATTTGGTATTC+GGG - chr4_3:41688572-41688591 Msa0641320:CDS 50.0%
! GCAGCTTCAGCCACATCTTT+TGG + chr4_3:41688711-41688730 None:intergenic 50.0%
GGCTGAAGCTGCTCTTTACT+TGG - chr4_3:41688719-41688738 Msa0641320:five_prime_UTR 50.0%
! GGATTCAGCGTTGGAAACAG+TGG - chr4_3:41688790-41688809 Msa0641320:five_prime_UTR 50.0%
TAGTTGCCTTCTTGGACCGT+GGG + chr4_3:41687154-41687173 None:intergenic 50.0%
CACAATGGCAACCGTTCCAT+TGG - chr4_3:41687321-41687340 Msa0641320:CDS 50.0%
CTTGGAGAAGAGTCTTGCAG+TGG + chr4_3:41688021-41688040 None:intergenic 50.0%
GCAAGACTCTTCTCCAAGCA+AGG - chr4_3:41688023-41688042 Msa0641320:intron 50.0%
AACGACTTGAGCTCCTTGCT+TGG + chr4_3:41688039-41688058 None:intergenic 50.0%
TGTCACGTCACAGCGAACAT+AGG + chr4_3:41688126-41688145 None:intergenic 50.0%
TGTTCGCTGTGACGTGACAA+AGG - chr4_3:41688127-41688146 Msa0641320:intron 50.0%
AATTATGCTACCCCGTCGAG+CGG + chr4_3:41688351-41688370 None:intergenic 50.0%
! GGCGTGCTTTGAACATGTGT+AGG + chr4_3:41688420-41688439 None:intergenic 50.0%
TGTTCAAAGCACGCCGTTGT+TGG - chr4_3:41688425-41688444 Msa0641320:intron 50.0%
GTTCAAAGCACGCCGTTGTT+GGG - chr4_3:41688426-41688445 Msa0641320:intron 50.0%
AGAAACACAGCCATCGAGCT+TGG - chr4_3:41688555-41688574 Msa0641320:CDS 50.0%
GAAACACAGCCATCGAGCTT+GGG - chr4_3:41688556-41688575 Msa0641320:CDS 50.0%
GCTTGGGCCATTTGGTATTC+GGG - chr4_3:41688572-41688591 Msa0641320:CDS 50.0%
! GCAGCTTCAGCCACATCTTT+TGG + chr4_3:41688711-41688730 None:intergenic 50.0%
GGCTGAAGCTGCTCTTTACT+TGG - chr4_3:41688719-41688738 Msa0641320:five_prime_UTR 50.0%
! GGATTCAGCGTTGGAAACAG+TGG - chr4_3:41688790-41688809 Msa0641320:five_prime_UTR 50.0%
TCTTGGACCGTGGGAACACA+CGG + chr4_3:41687145-41687164 None:intergenic 55.0%
TGTGTTCCCACGGTCCAAGA+AGG - chr4_3:41687145-41687164 Msa0641320:intron 55.0%
GTAGTTGCCTTCTTGGACCG+TGG + chr4_3:41687155-41687174 None:intergenic 55.0%
TACAAGGCTTGAGGGGAAGG+TGG - chr4_3:41687959-41687978 Msa0641320:intron 55.0%
ATTATGCTACCCCGTCGAGC+GGG + chr4_3:41688350-41688369 None:intergenic 55.0%
ACCAAATGGCCCAAGCTCGA+TGG + chr4_3:41688568-41688587 None:intergenic 55.0%
TCTTGGACCGTGGGAACACA+CGG + chr4_3:41687145-41687164 None:intergenic 55.0%
TGTGTTCCCACGGTCCAAGA+AGG - chr4_3:41687145-41687164 Msa0641320:intron 55.0%
GTAGTTGCCTTCTTGGACCG+TGG + chr4_3:41687155-41687174 None:intergenic 55.0%
TACAAGGCTTGAGGGGAAGG+TGG - chr4_3:41687959-41687978 Msa0641320:intron 55.0%
ATTATGCTACCCCGTCGAGC+GGG + chr4_3:41688350-41688369 None:intergenic 55.0%
ACCAAATGGCCCAAGCTCGA+TGG + chr4_3:41688568-41688587 None:intergenic 55.0%
!! GGGAAGGTGGCTCTGATCAC+CGG - chr4_3:41687972-41687991 Msa0641320:intron 60.0%
!! AAGGTGGCTCTGATCACCGG+TGG - chr4_3:41687975-41687994 Msa0641320:intron 60.0%
GGGTTATGATCCCCGCTCGA+CGG - chr4_3:41688336-41688355 Msa0641320:intron 60.0%
GGTTATGATCCCCGCTCGAC+GGG - chr4_3:41688337-41688356 Msa0641320:intron 60.0%
GTTATGATCCCCGCTCGACG+GGG - chr4_3:41688338-41688357 Msa0641320:intron 60.0%
TTATGCTACCCCGTCGAGCG+GGG + chr4_3:41688349-41688368 None:intergenic 60.0%
GCCATCGAGCTTGGGCCATT+TGG - chr4_3:41688564-41688583 Msa0641320:CDS 60.0%
!! GGGAAGGTGGCTCTGATCAC+CGG - chr4_3:41687972-41687991 Msa0641320:intron 60.0%
!! AAGGTGGCTCTGATCACCGG+TGG - chr4_3:41687975-41687994 Msa0641320:intron 60.0%
GGGTTATGATCCCCGCTCGA+CGG - chr4_3:41688336-41688355 Msa0641320:intron 60.0%
GGTTATGATCCCCGCTCGAC+GGG - chr4_3:41688337-41688356 Msa0641320:intron 60.0%
GTTATGATCCCCGCTCGACG+GGG - chr4_3:41688338-41688357 Msa0641320:intron 60.0%
TTATGCTACCCCGTCGAGCG+GGG + chr4_3:41688349-41688368 None:intergenic 60.0%
GCCATCGAGCTTGGGCCATT+TGG - chr4_3:41688564-41688583 Msa0641320:CDS 60.0%
CTGATCACCGGTGGTGCGAG+CGG - chr4_3:41687984-41688003 Msa0641320:intron 65.0%
CTGATCACCGGTGGTGCGAG+CGG - chr4_3:41687984-41688003 Msa0641320:intron 65.0%
ACCGGTGGTGCGAGCGGCAT+CGG - chr4_3:41687990-41688009 Msa0641320:intron 70.0%
ACCGATGCCGCTCGCACCAC+CGG + chr4_3:41687994-41688013 None:intergenic 70.0%
!! TGGTGCGAGCGGCATCGGTG+AGG - chr4_3:41687995-41688014 Msa0641320:intron 70.0%
ACCGGTGGTGCGAGCGGCAT+CGG - chr4_3:41687990-41688009 Msa0641320:intron 70.0%
ACCGATGCCGCTCGCACCAC+CGG + chr4_3:41687994-41688013 None:intergenic 70.0%
!! TGGTGCGAGCGGCATCGGTG+AGG - chr4_3:41687995-41688014 Msa0641320:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 41687076 41688840 41687076 ID=Msa0641320;Name=Msa0641320
chr4_3 mRNA 41687076 41688840 41687076 ID=Msa0641320-mRNA-1;Parent=Msa0641320;Name=Msa0641320-mRNA-1;_AED=0.06;_eAED=0.06;_QI=249|0.25|0.2|1|0.5|0.4|5|0|244
chr4_3 exon 41687076 41687159 41687076 ID=Msa0641320-mRNA-1:exon:9354;Parent=Msa0641320-mRNA-1
chr4_3 exon 41687200 41687343 41687200 ID=Msa0641320-mRNA-1:exon:9353;Parent=Msa0641320-mRNA-1
chr4_3 exon 41687474 41687712 41687474 ID=Msa0641320-mRNA-1:exon:9352;Parent=Msa0641320-mRNA-1
chr4_3 exon 41687722 41687951 41687722 ID=Msa0641320-mRNA-1:exon:9351;Parent=Msa0641320-mRNA-1
chr4_3 exon 41688554 41688840 41688554 ID=Msa0641320-mRNA-1:exon:9350;Parent=Msa0641320-mRNA-1
chr4_3 five_prime_UTR 41688592 41688840 41688592 ID=Msa0641320-mRNA-1:five_prime_utr;Parent=Msa0641320-mRNA-1
chr4_3 CDS 41688554 41688591 41688554 ID=Msa0641320-mRNA-1:cds;Parent=Msa0641320-mRNA-1
chr4_3 CDS 41687722 41687951 41687722 ID=Msa0641320-mRNA-1:cds;Parent=Msa0641320-mRNA-1
chr4_3 CDS 41687474 41687712 41687474 ID=Msa0641320-mRNA-1:cds;Parent=Msa0641320-mRNA-1
chr4_3 CDS 41687200 41687343 41687200 ID=Msa0641320-mRNA-1:cds;Parent=Msa0641320-mRNA-1
chr4_3 CDS 41687076 41687159 41687076 ID=Msa0641320-mRNA-1:cds;Parent=Msa0641320-mRNA-1
Gene Sequence

>Msa0641320

ATGGCAACCGTTCCATTGGTCTCTAATACCTTAAGAAGGCTTGAGGGGAAGGTGGCTCTGATCACCGGTGGTGCGAGCGGCATCGGTGAGGCCACTGCAAGACTCTTCTCCAAGCAAGGAGCTCAAGTCGTTATAGCTGACATTCAAGACGACAAAGGACACTCTATTTGCAACGAACTACACAAATCCTCTTCTTCCTATGTTCGCTGTGACGTGACAAAGGAAGAAGACATTGAAAATGCTGTGAACACAACCGTTTCCAAGTACGATATCATGTTTAACAACGCTGGCATAAGCGGTGTAAACAAAACAAAGATACTTGAAAACAAGTTATCCGAATTTGAAGATGTGATTAAAGTAAACTTGACTGGCGTCTTTCTTGGAACAAAGCATGCATCAAGGGTTATGATCCCCGCTCGACGGGGTAGCATAATTAACACGGCTAGTGTTTGTGGAAGCATTGGTGGCTGCGCTCCACATGCCTACACATGTTCAAAGCACGCCGTTCTTGGGCCATTTGGTATTCGGGTGAATTGTGTGTCACCTTATGTTCTTGCGACTCCAATGGTTACAAATTTCTTTAAGCTTGATGGTGGTGGGGTTGTAGATGTTTATTCTAACCTAAAAGGTGCTAATTTTATGCCAAAAGATTATGTTAGTGGTCATAATCTTGTCATAGATGGTGGATTCAGCGTTGGAAACAGTGGATTTTGTGTGTTTGATCAATCTCTCTGA
Protein sequence

>Msa0641320

MATVPLVSNTLRRLEGKVALITGGASGIGEATARLFSKQGAQVVIADIQDDKGHSICNELHKSSSSYVRCDVTKEEDIENAVNTTVSKYDIMFNNAGISGVNKTKILENKLSEFEDVIKVNLTGVFLGTKHASRVMIPARRGSIINTASVCGSIGGCAPHAYTCSKHAVLGPFGIRVNCVSPYVLATPMVTNFFKLDGGGVVDVYSNLKGANFMPKDYVSGHNLVIDGGFSVGNSGFCVFDQSL*