Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0015460 | XP_013467041.1 | 96.715 | 274 | 9 | 0 | 1 | 274 | 1 | 274 | 0.0 | 551 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0015460 | sp|Q9LW60|P2C44_ARATH | 43.369 | 279 | 132 | 7 | 1 | 273 | 1 | 259 | 8.73e-70 | 219 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0010490 | Msa0015460 | 0.806643 | 7.446321e-50 | -8.615850e-47 |
Msa0010500 | Msa0015460 | 0.806606 | 7.582752e-50 | -8.615850e-47 |
Msa0015460 | Msa0015480 | 0.949996 | 4.090380e-108 | -8.615850e-47 |
Msa0015460 | Msa0017320 | 0.800888 | 1.166571e-48 | -8.615850e-47 |
Msa0015460 | Msa0037540 | -0.837056 | 6.509358e-57 | -8.615850e-47 |
Msa0015460 | Msa0037590 | -0.837977 | 3.780285e-57 | -8.615850e-47 |
Msa0015460 | Msa0064700 | 0.864641 | 1.050300e-64 | -8.615850e-47 |
Msa0015460 | Msa0065010 | 0.819185 | 1.325995e-52 | -8.615850e-47 |
Msa0015460 | Msa0082680 | -0.813305 | 2.737689e-51 | -8.615850e-47 |
Msa0015460 | Msa0090390 | 0.838135 | 3.443011e-57 | -8.615850e-47 |
Msa0015460 | Msa0091250 | -0.801283 | 9.686572e-49 | -8.615850e-47 |
Msa0015460 | Msa0097590 | 0.809875 | 1.524438e-50 | -8.615850e-47 |
Msa0015460 | Msa0097610 | 0.809135 | 2.197638e-50 | -8.615850e-47 |
Msa0015460 | Msa0100090 | 0.806257 | 8.978931e-50 | -8.615850e-47 |
Msa0015460 | Msa0109590 | 0.911262 | 7.420105e-83 | -8.615850e-47 |
Msa0015460 | Msa0118540 | 0.832666 | 8.300712e-56 | -8.615850e-47 |
Msa0015460 | Msa0129190 | -0.832055 | 1.175874e-55 | -8.615850e-47 |
Msa0015460 | Msa0130520 | 0.829413 | 5.220698e-55 | -8.615850e-47 |
Msa0015460 | Msa0137870 | 0.817810 | 2.718450e-52 | -8.615850e-47 |
Msa0015460 | Msa0140520 | -0.802319 | 5.935717e-49 | -8.615850e-47 |
Msa0015460 | Msa0148120 | 0.810039 | 1.405453e-50 | -8.615850e-47 |
Msa0015460 | Msa0154920 | 0.803989 | 2.679236e-49 | -8.615850e-47 |
Msa0015460 | Msa0155340 | 0.815038 | 1.134571e-51 | -8.615850e-47 |
Msa0015460 | Msa0155880 | 0.979039 | 4.223958e-147 | -8.615850e-47 |
Msa0015460 | Msa0174390 | 0.810327 | 1.217795e-50 | -8.615850e-47 |
Msa0015460 | Msa0177700 | -0.826572 | 2.520277e-54 | -8.615850e-47 |
Msa0015460 | Msa0183460 | 0.804972 | 1.670860e-49 | -8.615850e-47 |
Msa0015460 | Msa0186310 | 0.822239 | 2.634287e-53 | -8.615850e-47 |
Msa0015460 | Msa0187230 | 0.835604 | 1.523286e-56 | -8.615850e-47 |
Msa0015460 | Msa0189520 | 0.820972 | 5.170761e-53 | -8.615850e-47 |
Msa0015460 | Msa0197660 | 0.847388 | 1.193424e-59 | -8.615850e-47 |
Msa0015460 | Msa0231660 | 0.808174 | 3.524816e-50 | -8.615850e-47 |
Msa0015460 | Msa0236070 | 0.810248 | 1.266551e-50 | -8.615850e-47 |
Msa0015460 | Msa0239490 | 0.816488 | 5.388407e-52 | -8.615850e-47 |
Msa0015460 | Msa0239800 | 0.849983 | 2.277988e-60 | -8.615850e-47 |
Msa0015460 | Msa0244140 | 0.822511 | 2.278568e-53 | -8.615850e-47 |
Msa0015460 | Msa0244190 | 0.826680 | 2.375116e-54 | -8.615850e-47 |
Msa0015460 | Msa0245310 | 0.827469 | 1.537751e-54 | -8.615850e-47 |
Msa0015460 | Msa0256330 | 0.808877 | 2.495604e-50 | -8.615850e-47 |
Msa0015460 | Msa0257500 | 0.813408 | 2.598849e-51 | -8.615850e-47 |
Msa0015460 | Msa0261360 | 0.826934 | 2.065087e-54 | -8.615850e-47 |
Msa0015460 | Msa0268090 | 0.829268 | 5.660956e-55 | -8.615850e-47 |
Msa0015460 | Msa0271360 | 0.830055 | 3.641674e-55 | -8.615850e-47 |
Msa0015460 | Msa0277820 | 0.815672 | 8.197584e-52 | -8.615850e-47 |
Msa0015460 | Msa0295330 | 0.818567 | 1.832176e-52 | -8.615850e-47 |
Msa0015460 | Msa0296980 | -0.804522 | 2.074650e-49 | -8.615850e-47 |
Msa0015460 | Msa0308200 | 0.802123 | 6.513214e-49 | -8.615850e-47 |
Msa0015460 | Msa0309880 | 0.805305 | 1.423216e-49 | -8.615850e-47 |
Msa0015460 | Msa0314120 | 0.812077 | 5.082901e-51 | -8.615850e-47 |
Msa0015460 | Msa0317510 | 0.842773 | 2.106881e-58 | -8.615850e-47 |
Msa0015460 | Msa0320610 | 0.817291 | 3.559559e-52 | -8.615850e-47 |
Msa0015460 | Msa0335820 | -0.811974 | 5.352140e-51 | -8.615850e-47 |
Msa0015460 | Msa0340690 | 0.836626 | 8.379676e-57 | -8.615850e-47 |
Msa0015460 | Msa0340710 | 0.825665 | 4.141148e-54 | -8.615850e-47 |
Msa0015460 | Msa0347610 | 0.818112 | 2.323678e-52 | -8.615850e-47 |
Msa0015460 | Msa0348620 | 0.811420 | 7.064391e-51 | -8.615850e-47 |
Msa0015460 | Msa0357760 | 0.811816 | 5.792886e-51 | -8.615850e-47 |
Msa0015460 | Msa0357790 | 0.816402 | 5.634042e-52 | -8.615850e-47 |
Msa0015460 | Msa0357830 | 0.822875 | 1.874127e-53 | -8.615850e-47 |
Msa0015460 | Msa0357840 | 0.817137 | 3.854065e-52 | -8.615850e-47 |
Msa0015460 | Msa0357870 | 0.801699 | 7.961124e-49 | -8.615850e-47 |
Msa0015460 | Msa0371250 | 0.801265 | 9.770555e-49 | -8.615850e-47 |
Msa0015460 | Msa0385490 | 0.839728 | 1.331683e-57 | -8.615850e-47 |
Msa0015460 | Msa0386040 | 0.828020 | 1.133993e-54 | -8.615850e-47 |
Msa0015460 | Msa0387370 | 0.813809 | 2.121275e-51 | -8.615850e-47 |
Msa0015460 | Msa0387910 | 0.808980 | 2.371942e-50 | -8.615850e-47 |
Msa0015460 | Msa0388030 | -0.802836 | 4.643586e-49 | -8.615850e-47 |
Msa0015460 | Msa0394340 | 0.811641 | 6.323930e-51 | -8.615850e-47 |
Msa0015460 | Msa0404000 | 0.801479 | 8.830330e-49 | -8.615850e-47 |
Msa0015460 | Msa0412840 | 0.808741 | 2.668478e-50 | -8.615850e-47 |
Msa0015460 | Msa0429950 | 0.824272 | 8.830553e-54 | -8.615850e-47 |
Msa0015460 | Msa0435690 | 0.809375 | 1.951519e-50 | -8.615850e-47 |
Msa0015460 | Msa0436190 | 0.809899 | 1.506337e-50 | -8.615850e-47 |
Msa0015460 | Msa0436920 | -0.808478 | 3.036588e-50 | -8.615850e-47 |
Msa0015460 | Msa0457510 | 0.844931 | 5.566677e-59 | -8.615850e-47 |
Msa0015460 | Msa0467220 | 0.808375 | 3.195031e-50 | -8.615850e-47 |
Msa0015460 | Msa0468130 | 0.803429 | 3.500748e-49 | -8.615850e-47 |
Msa0015460 | Msa0468320 | 0.811814 | 5.800848e-51 | -8.615850e-47 |
Msa0015460 | Msa0482180 | 0.823238 | 1.542473e-53 | -8.615850e-47 |
Msa0015460 | Msa0485490 | 0.804318 | 2.288527e-49 | -8.615850e-47 |
Msa0015460 | Msa0489610 | 0.834994 | 2.172087e-56 | -8.615850e-47 |
Msa0015460 | Msa0500720 | 0.808029 | 3.784905e-50 | -8.615850e-47 |
Msa0015460 | Msa0524600 | 0.802561 | 5.292351e-49 | -8.615850e-47 |
Msa0015460 | Msa0530100 | 0.837627 | 4.649437e-57 | -8.615850e-47 |
Msa0015460 | Msa0532930 | 0.816163 | 6.371874e-52 | -8.615850e-47 |
Msa0015460 | Msa0534410 | 0.825145 | 5.499167e-54 | -8.615850e-47 |
Msa0015460 | Msa0545290 | 0.806596 | 7.619293e-50 | -8.615850e-47 |
Msa0015460 | Msa0549780 | 0.816240 | 6.123292e-52 | -8.615850e-47 |
Msa0015460 | Msa0587190 | 0.806359 | 8.545816e-50 | -8.615850e-47 |
Msa0015460 | Msa0589390 | 0.806849 | 6.735793e-50 | -8.615850e-47 |
Msa0015460 | Msa0590650 | 0.820770 | 5.755591e-53 | -8.615850e-47 |
Msa0015460 | Msa0597000 | 0.841180 | 5.555148e-58 | -8.615850e-47 |
Msa0015460 | Msa0600410 | -0.816550 | 5.219594e-52 | -8.615850e-47 |
Msa0015460 | Msa0600890 | 0.809813 | 1.571498e-50 | -8.615850e-47 |
Msa0015460 | Msa0602370 | 0.808642 | 2.801606e-50 | -8.615850e-47 |
Msa0015460 | Msa0603670 | 0.808047 | 3.752353e-50 | -8.615850e-47 |
Msa0015460 | Msa0610130 | 0.833747 | 4.465146e-56 | -8.615850e-47 |
Msa0015460 | Msa0610180 | 0.806768 | 7.005725e-50 | -8.615850e-47 |
Msa0015460 | Msa0619920 | 0.823900 | 1.079462e-53 | -8.615850e-47 |
Msa0015460 | Msa0620620 | 0.818408 | 1.991274e-52 | -8.615850e-47 |
Msa0015460 | Msa0624960 | 0.802548 | 5.325587e-49 | -8.615850e-47 |
Msa0015460 | Msa0629650 | 0.813106 | 3.027684e-51 | -8.615850e-47 |
Msa0015460 | Msa0630950 | 0.818688 | 1.720533e-52 | -8.615850e-47 |
Msa0015460 | Msa0641320 | 0.805203 | 1.495344e-49 | -8.615850e-47 |
Msa0015460 | Msa0643320 | 0.813760 | 2.174525e-51 | -8.615850e-47 |
Msa0015460 | Msa0649350 | 0.801303 | 9.595564e-49 | -8.615850e-47 |
Msa0015460 | Msa0654010 | 0.819295 | 1.252134e-52 | -8.615850e-47 |
Msa0015460 | Msa0661710 | 0.817707 | 2.868444e-52 | -8.615850e-47 |
Msa0015460 | Msa0669190 | 0.825579 | 4.341662e-54 | -8.615850e-47 |
Msa0015460 | Msa0679550 | 0.826600 | 2.482178e-54 | -8.615850e-47 |
Msa0015460 | Msa0679810 | 0.806722 | 7.167078e-50 | -8.615850e-47 |
Msa0015460 | Msa0682090 | 0.806890 | 6.601780e-50 | -8.615850e-47 |
Msa0015460 | Msa0682140 | 0.808101 | 3.653500e-50 | -8.615850e-47 |
Msa0015460 | Msa0683140 | 0.819680 | 1.022530e-52 | -8.615850e-47 |
Msa0015460 | Msa0683600 | 0.820962 | 5.197766e-53 | -8.615850e-47 |
Msa0015460 | Msa0689780 | 0.835452 | 1.664187e-56 | -8.615850e-47 |
Msa0015460 | Msa0693790 | 0.811449 | 6.961682e-51 | -8.615850e-47 |
Msa0015460 | Msa0703910 | 0.833573 | 4.934317e-56 | -8.615850e-47 |
Msa0015460 | Msa0705600 | 0.810897 | 9.171141e-51 | -8.615850e-47 |
Msa0015460 | Msa0706400 | 0.832504 | 9.104523e-56 | -8.615850e-47 |
Msa0015460 | Msa0711150 | 0.808453 | 3.074702e-50 | -8.615850e-47 |
Msa0015460 | Msa0713350 | 0.809396 | 1.931649e-50 | -8.615850e-47 |
Msa0015460 | Msa0715410 | 0.858895 | 6.014880e-63 | -8.615850e-47 |
Msa0015460 | Msa0731180 | 0.801295 | 9.631228e-49 | -8.615850e-47 |
Msa0015460 | Msa0737350 | 0.810237 | 1.273478e-50 | -8.615850e-47 |
Msa0015460 | Msa0742150 | 0.837707 | 4.433167e-57 | -8.615850e-47 |
Msa0015460 | Msa0748070 | 0.802084 | 6.635617e-49 | -8.615850e-47 |
Msa0015460 | Msa0749440 | 0.800954 | 1.130949e-48 | -8.615850e-47 |
Msa0015460 | Msa0779090 | 0.831483 | 1.627043e-55 | -8.615850e-47 |
Msa0015460 | Msa0784380 | 0.820319 | 7.303975e-53 | -8.615850e-47 |
Msa0015460 | Msa0784860 | 0.802703 | 4.947363e-49 | -8.615850e-47 |
Msa0015460 | Msa0786070 | 0.811107 | 8.258145e-51 | -8.615850e-47 |
Msa0015460 | Msa0793380 | 0.804292 | 2.316406e-49 | -8.615850e-47 |
Msa0015460 | Msa0793390 | 0.809172 | 2.157241e-50 | -8.615850e-47 |
Msa0015460 | Msa0802410 | 0.810182 | 1.308788e-50 | -8.615850e-47 |
Msa0015460 | Msa0818170 | 0.804969 | 1.673786e-49 | -8.615850e-47 |
Msa0015460 | Msa0826760 | 0.830902 | 2.261104e-55 | -8.615850e-47 |
Msa0015460 | Msa0860400 | 0.803998 | 2.667958e-49 | -8.615850e-47 |
Msa0015460 | Msa0860900 | -0.809599 | 1.747651e-50 | -8.615850e-47 |
Msa0015460 | Msa0861470 | 0.823161 | 1.607931e-53 | -8.615850e-47 |
Msa0015460 | Msa0861570 | 0.822598 | 2.174707e-53 | -8.615850e-47 |
Msa0015460 | Msa0864470 | -0.821416 | 4.085370e-53 | -8.615850e-47 |
Msa0015460 | Msa0870150 | 0.812751 | 3.620738e-51 | -8.615850e-47 |
Msa0015460 | Msa0880810 | 0.801926 | 7.149385e-49 | -8.615850e-47 |
Msa0015460 | Msa0888990 | 0.816638 | 4.987482e-52 | -8.615850e-47 |
Msa0015460 | Msa0890550 | 0.809333 | 1.992523e-50 | -8.615850e-47 |
Msa0015460 | Msa0895310 | 0.825740 | 3.975561e-54 | -8.615850e-47 |
Msa0015460 | Msa0898890 | 0.812779 | 3.570852e-51 | -8.615850e-47 |
Msa0015460 | Msa0901320 | 0.819017 | 1.448597e-52 | -8.615850e-47 |
Msa0015460 | Msa0909000 | -0.801111 | 1.050583e-48 | -8.615850e-47 |
Msa0015460 | Msa0925770 | 0.800509 | 1.393746e-48 | -8.615850e-47 |
Msa0015460 | Msa0932100 | 0.830289 | 3.193700e-55 | -8.615850e-47 |
Msa0015460 | Msa0932190 | 0.819560 | 1.089308e-52 | -8.615850e-47 |
Msa0015460 | Msa0937330 | 0.830233 | 3.294911e-55 | -8.615850e-47 |
Msa0015460 | Msa0942550 | -0.835759 | 1.391518e-56 | -8.615850e-47 |
Msa0015460 | Msa0942560 | -0.807040 | 6.138435e-50 | -8.615850e-47 |
Msa0015460 | Msa0945100 | 0.807517 | 4.862280e-50 | -8.615850e-47 |
Msa0015460 | Msa0945120 | 0.845340 | 4.318095e-59 | -8.615850e-47 |
Msa0015460 | Msa0951400 | 0.807760 | 4.318525e-50 | -8.615850e-47 |
Msa0015460 | Msa0960740 | 0.823706 | 1.198979e-53 | -8.615850e-47 |
Msa0015460 | Msa0970230 | 0.829250 | 5.719431e-55 | -8.615850e-47 |
Msa0015460 | Msa0974630 | 0.809645 | 1.708222e-50 | -8.615850e-47 |
Msa0015460 | Msa0980020 | 0.801210 | 1.002744e-48 | -8.615850e-47 |
Msa0015460 | Msa0993240 | 0.805963 | 1.035676e-49 | -8.615850e-47 |
Msa0015460 | Msa0994370 | 0.827944 | 1.182603e-54 | -8.615850e-47 |
Msa0015460 | Msa0994390 | 0.853748 | 1.946762e-61 | -8.615850e-47 |
Msa0015460 | Msa0996170 | 0.811979 | 5.338604e-51 | -8.615850e-47 |
Msa0015460 | Msa1000930 | 0.820625 | 6.213654e-53 | -8.615850e-47 |
Msa0015460 | Msa1001080 | 0.809546 | 1.794138e-50 | -8.615850e-47 |
Msa0015460 | Msa1012830 | 0.811492 | 6.815914e-51 | -8.615850e-47 |
Msa0015460 | Msa1025080 | 0.801887 | 7.282887e-49 | -8.615850e-47 |
Msa0015460 | Msa1029080 | -0.815488 | 9.011614e-52 | -8.615850e-47 |
Msa0015460 | Msa1047720 | 0.805669 | 1.194163e-49 | -8.615850e-47 |
Msa0015460 | Msa1062030 | 0.819128 | 1.366797e-52 | -8.615850e-47 |
Msa0015460 | Msa1064250 | 0.831114 | 2.005431e-55 | -8.615850e-47 |
Msa0015460 | Msa1071320 | 0.820834 | 5.563762e-53 | -8.615850e-47 |
Msa0015460 | Msa1081790 | -0.805036 | 1.620494e-49 | -8.615850e-47 |
Msa0015460 | Msa1088290 | 0.809338 | 1.988109e-50 | -8.615850e-47 |
Msa0015460 | Msa1089320 | 0.803550 | 3.305009e-49 | -8.615850e-47 |
Msa0015460 | Msa1094430 | 0.838978 | 2.084953e-57 | -8.615850e-47 |
Msa0015460 | Msa1103660 | -0.820308 | 7.345877e-53 | -8.615850e-47 |
Msa0015460 | Msa1107190 | 0.822103 | 2.833414e-53 | -8.615850e-47 |
Msa0015460 | Msa1109090 | 0.804633 | 1.967174e-49 | -8.615850e-47 |
Msa0015460 | Msa1111870 | 0.819438 | 1.161219e-52 | -8.615850e-47 |
Msa0015460 | Msa1115280 | 0.812291 | 4.565035e-51 | -8.615850e-47 |
Msa0015460 | Msa1120810 | 0.806050 | 9.927690e-50 | -8.615850e-47 |
Msa0015460 | Msa1126850 | 0.809666 | 1.690817e-50 | -8.615850e-47 |
Msa0015460 | Msa1133230 | 0.812547 | 4.013512e-51 | -8.615850e-47 |
Msa0015460 | Msa1133250 | 0.819132 | 1.363672e-52 | -8.615850e-47 |
Msa0015460 | Msa1150790 | 0.810186 | 1.306641e-50 | -8.615850e-47 |
Msa0015460 | Msa1152920 | 0.803654 | 3.145007e-49 | -8.615850e-47 |
Msa0015460 | Msa1156170 | -0.806671 | 7.343573e-50 | -8.615850e-47 |
Msa0015460 | Msa1164020 | 0.825079 | 5.698550e-54 | -8.615850e-47 |
Msa0015460 | Msa1177780 | 0.805927 | 1.053802e-49 | -8.615850e-47 |
Msa0015460 | Msa1200250 | 0.813163 | 2.942161e-51 | -8.615850e-47 |
Msa0015460 | Msa1206310 | 0.826306 | 2.915767e-54 | -8.615850e-47 |
Msa0015460 | Msa1206360 | 0.835725 | 1.419711e-56 | -8.615850e-47 |
Msa0015460 | Msa1218580 | 0.802547 | 5.326142e-49 | -8.615850e-47 |
Msa0015460 | Msa1219810 | 0.809837 | 1.553017e-50 | -8.615850e-47 |
Msa0015460 | Msa1231840 | 0.801465 | 8.891917e-49 | -8.615850e-47 |
Msa0015460 | Msa1253810 | 0.804168 | 2.458324e-49 | -8.615850e-47 |
Msa0015460 | Msa1258370 | 0.817637 | 2.974818e-52 | -8.615850e-47 |
Msa0015460 | Msa1270660 | 0.829551 | 4.830980e-55 | -8.615850e-47 |
Msa0015460 | Msa1270730 | 0.816684 | 4.869741e-52 | -8.615850e-47 |
Msa0015460 | Msa1274560 | 0.804037 | 2.617750e-49 | -8.615850e-47 |
Msa0015460 | Msa1276340 | 0.836901 | 7.132729e-57 | -8.615850e-47 |
Msa0015460 | Msa1293590 | 0.807208 | 5.656402e-50 | -8.615850e-47 |
Msa0015460 | Msa1305350 | 0.800050 | 1.728203e-48 | -8.615850e-47 |
Msa0015460 | Msa1314770 | 0.800058 | 1.721854e-48 | -8.615850e-47 |
Msa0015460 | Msa1332050 | 0.813507 | 2.471567e-51 | -8.615850e-47 |
Msa0015460 | Msa1355890 | 0.844609 | 6.800914e-59 | -8.615850e-47 |
Msa0015460 | Msa1357430 | 0.802371 | 5.789979e-49 | -8.615850e-47 |
Msa0015460 | Msa1358670 | 0.811448 | 6.965356e-51 | -8.615850e-47 |
Msa0015460 | Msa1362880 | 0.800065 | 1.716097e-48 | -8.615850e-47 |
Msa0015460 | Msa1363700 | 0.808194 | 3.490513e-50 | -8.615850e-47 |
Msa0015460 | Msa1364210 | 0.805860 | 1.088797e-49 | -8.615850e-47 |
Msa0015460 | Msa1371090 | 0.808354 | 3.227063e-50 | -8.615850e-47 |
Msa0015460 | Msa1371940 | 0.802255 | 6.117293e-49 | -8.615850e-47 |
Msa0015460 | Msa1381480 | 0.816101 | 6.577264e-52 | -8.615850e-47 |
Msa0015460 | Msa1382790 | 0.815023 | 1.143021e-51 | -8.615850e-47 |
Msa0015460 | Msa1388860 | 0.804829 | 1.789767e-49 | -8.615850e-47 |
Msa0015460 | Msa1403340 | 0.829815 | 4.167415e-55 | -8.615850e-47 |
Msa0015460 | Msa1420270 | 0.827056 | 1.930902e-54 | -8.615850e-47 |
Msa0015460 | Msa1436600 | 0.807647 | 4.562742e-50 | -8.615850e-47 |
Msa0015460 | Msa1438700 | 0.807583 | 4.707960e-50 | -8.615850e-47 |
Msa0015460 | Msa1443610 | 0.843316 | 1.509926e-58 | -8.615850e-47 |
Msa0015460 | Msa1444260 | 0.801639 | 8.189561e-49 | -8.615850e-47 |
Msa0015460 | Msa1454950 | 0.813714 | 2.225423e-51 | -8.615850e-47 |
Msa0015460 | Msa1457160 | 0.822921 | 1.829095e-53 | -8.615850e-47 |
Msa0015460 | Msa1459760 | -0.831099 | 2.022598e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0015460 | MtrunA17_Chr1g0166481 | 96.715 | 274 | 9 | 0 | 1 | 274 | 1 | 274 | 0.0 | 551 |
Msa0015460 | MtrunA17_Chr1g0187481 | 60.072 | 278 | 107 | 1 | 1 | 274 | 1 | 278 | 2.54e-119 | 342 |
Msa0015460 | MtrunA17_Chr8g0360351 | 37.891 | 256 | 129 | 6 | 41 | 273 | 33 | 281 | 3.70e-39 | 138 |
Msa0015460 | MtrunA17_Chr2g0279151 | 34.457 | 267 | 145 | 5 | 30 | 273 | 21 | 280 | 1.69e-34 | 125 |
Msa0015460 | MtrunA17_Chr4g0050381 | 32.143 | 280 | 160 | 5 | 17 | 273 | 4 | 276 | 5.14e-34 | 124 |
Msa0015460 | MtrunA17_Chr2g0317021 | 36.328 | 256 | 133 | 6 | 41 | 273 | 84 | 332 | 4.68e-33 | 123 |
Msa0015460 | MtrunA17_Chr5g0426141 | 35.398 | 226 | 121 | 4 | 71 | 273 | 58 | 281 | 4.67e-32 | 119 |
Msa0015460 | MtrunA17_Chr3g0115851 | 32.743 | 226 | 127 | 4 | 71 | 273 | 58 | 281 | 5.53e-28 | 108 |
Msa0015460 | MtrunA17_Chr4g0051661 | 32.031 | 256 | 143 | 5 | 41 | 273 | 150 | 397 | 3.31e-25 | 103 |
Msa0015460 | MtrunA17_Chr1g0150451 | 28.837 | 215 | 132 | 3 | 80 | 273 | 109 | 323 | 3.63e-24 | 99.4 |
Msa0015460 | MtrunA17_Chr3g0136711 | 28.372 | 215 | 133 | 3 | 80 | 273 | 66 | 280 | 4.84e-23 | 95.9 |
Msa0015460 | MtrunA17_Chr1g0212961 | 26.728 | 217 | 134 | 6 | 79 | 274 | 126 | 338 | 1.01e-16 | 79.0 |
Msa0015460 | MtrunA17_Chr3g0126511 | 26.840 | 231 | 144 | 5 | 67 | 274 | 113 | 341 | 5.12e-14 | 71.2 |
Msa0015460 | MtrunA17_Chr5g0407161 | 26.104 | 249 | 148 | 9 | 59 | 273 | 99 | 345 | 2.10e-13 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0015460 | AT3G23360.1 | 43.369 | 279 | 132 | 7 | 1 | 273 | 1 | 259 | 8.87e-71 | 219 |
Msa0015460 | AT4G28400.3 | 35.938 | 256 | 134 | 5 | 41 | 273 | 12 | 260 | 5.15e-38 | 134 |
Msa0015460 | AT4G28400.1 | 35.938 | 256 | 134 | 5 | 41 | 273 | 34 | 282 | 8.73e-38 | 134 |
Msa0015460 | AT2G20630.1 | 34.375 | 256 | 138 | 5 | 41 | 273 | 30 | 278 | 1.24e-37 | 134 |
Msa0015460 | AT2G20630.2 | 33.984 | 256 | 139 | 5 | 41 | 273 | 30 | 278 | 2.98e-35 | 128 |
Msa0015460 | AT3G15260.2 | 33.574 | 277 | 153 | 7 | 20 | 273 | 20 | 288 | 1.17e-34 | 127 |
Msa0015460 | AT3G15260.1 | 33.574 | 277 | 153 | 7 | 20 | 273 | 20 | 288 | 1.17e-34 | 127 |
Msa0015460 | AT1G22280.1 | 34.222 | 225 | 123 | 4 | 72 | 273 | 58 | 280 | 5.21e-30 | 114 |
Msa0015460 | AT1G22280.3 | 33.766 | 231 | 122 | 5 | 72 | 273 | 58 | 286 | 2.86e-29 | 112 |
Msa0015460 | AT1G78200.1 | 34.274 | 248 | 135 | 6 | 52 | 273 | 37 | 282 | 1.02e-28 | 110 |
Msa0015460 | AT1G78200.3 | 34.274 | 248 | 135 | 6 | 52 | 273 | 37 | 282 | 1.02e-28 | 110 |
Msa0015460 | AT1G78200.2 | 34.274 | 248 | 135 | 6 | 52 | 273 | 37 | 282 | 1.02e-28 | 110 |
Msa0015460 | AT1G78200.5 | 35.111 | 225 | 118 | 6 | 75 | 273 | 15 | 237 | 1.03e-28 | 110 |
Msa0015460 | AT1G78200.4 | 35.111 | 225 | 118 | 6 | 75 | 273 | 15 | 237 | 1.03e-28 | 110 |
Msa0015460 | AT1G34750.2 | 30.496 | 282 | 171 | 4 | 15 | 273 | 2 | 281 | 1.48e-27 | 107 |
Msa0015460 | AT1G34750.1 | 30.496 | 282 | 171 | 4 | 15 | 273 | 2 | 281 | 1.48e-27 | 107 |
Msa0015460 | AT1G34750.3 | 30.496 | 282 | 171 | 4 | 15 | 273 | 2 | 281 | 1.48e-27 | 107 |
Msa0015460 | AT4G31750.2 | 28.837 | 215 | 132 | 3 | 80 | 273 | 65 | 279 | 9.84e-25 | 100 |
Msa0015460 | AT4G31750.1 | 28.837 | 215 | 132 | 3 | 80 | 273 | 65 | 279 | 1.03e-24 | 100 |
Msa0015460 | AT4G31750.3 | 28.837 | 215 | 132 | 3 | 80 | 273 | 65 | 279 | 1.03e-24 | 100 |
Msa0015460 | AT2G34740.1 | 29.412 | 255 | 148 | 5 | 43 | 273 | 88 | 334 | 1.79e-23 | 98.2 |
Msa0015460 | AT5G24940.1 | 29.224 | 219 | 132 | 5 | 77 | 273 | 62 | 279 | 6.17e-23 | 97.8 |
Msa0015460 | AT4G28400.2 | 33.803 | 213 | 111 | 5 | 41 | 230 | 34 | 239 | 3.45e-21 | 90.1 |
Msa0015460 | AT5G10740.1 | 26.512 | 215 | 137 | 3 | 80 | 273 | 65 | 279 | 1.25e-20 | 90.5 |
Msa0015460 | AT5G10740.2 | 26.512 | 215 | 137 | 3 | 80 | 273 | 65 | 279 | 1.25e-20 | 90.5 |
Msa0015460 | AT5G53140.1 | 26.512 | 215 | 137 | 3 | 80 | 273 | 133 | 347 | 6.30e-17 | 80.5 |
Msa0015460 | AT5G53140.2 | 26.512 | 215 | 137 | 3 | 80 | 273 | 133 | 347 | 6.30e-17 | 80.5 |
Msa0015460 | AT2G34740.3 | 27.570 | 214 | 123 | 5 | 41 | 230 | 82 | 287 | 4.73e-13 | 68.6 |
Msa0015460 | AT2G34740.2 | 27.830 | 212 | 121 | 5 | 43 | 230 | 102 | 305 | 5.09e-13 | 68.6 |
Msa0015460 | AT1G34750.4 | 27.197 | 239 | 149 | 4 | 15 | 230 | 2 | 238 | 1.45e-11 | 63.5 |
Msa0015460 | AT3G51470.2 | 22.857 | 245 | 160 | 6 | 57 | 273 | 40 | 283 | 3.08e-11 | 63.2 |
Msa0015460 | AT3G51470.1 | 22.634 | 243 | 159 | 6 | 59 | 273 | 86 | 327 | 3.64e-11 | 63.2 |
Find 49 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAATTGGCTTGCAAATATT+TGG | 0.170520 | 1_1:-25004796 | None:intergenic |
GAGATTCTTGTCAAAATAAT+TGG | 0.178491 | 1_1:-25004811 | None:intergenic |
TGCTCTCTTGAGTGTTTCTT+TGG | 0.223443 | 1_1:-25005401 | None:intergenic |
ACATCTGTGATGATAATAAA+TGG | 0.273873 | 1_1:+25005490 | Msa0015460:CDS |
TGATAAGATTCACTGCTTCT+TGG | 0.281632 | 1_1:-25006501 | None:intergenic |
AACTTGTGGTTGGAAGTTAT+TGG | 0.296396 | 1_1:+25006240 | Msa0015460:CDS |
GTGGAGCATGATTGGATTAA+TGG | 0.328700 | 1_1:+25004663 | Msa0015460:CDS |
GAATGATTAAACATGAAATA+TGG | 0.342084 | 1_1:-25006594 | None:intergenic |
TAGTACTGAATTTGTGATCT+TGG | 0.359368 | 1_1:+25006271 | Msa0015460:CDS |
CTTAGGAATCTTTGATACTT+TGG | 0.361268 | 1_1:+25004758 | Msa0015460:CDS |
TTGACTTGCACAGGCACTTC+GGG | 0.367269 | 1_1:+25004542 | Msa0015460:intron |
TCTGTGATACCAATGTTTCT+TGG | 0.370921 | 1_1:-25005608 | None:intergenic |
ACATGATGACCATGTGATAT+TGG | 0.372321 | 1_1:-25004639 | None:intergenic |
CGGGTGAAACTCTCATGTTT+AGG | 0.373283 | 1_1:+25004561 | Msa0015460:CDS |
AAGAAGCAGTGAATCTTATC+AGG | 0.393702 | 1_1:+25006503 | Msa0015460:CDS |
TCAGATGAAACATGCATCAT+AGG | 0.400144 | 1_1:+25005463 | Msa0015460:CDS |
GGAATCTTTGATACTTTGGT+TGG | 0.403046 | 1_1:+25004762 | Msa0015460:CDS |
ACAAGAAGCAGCAGAGTGTT+TGG | 0.405610 | 1_1:+25006540 | Msa0015460:CDS |
GGCGTAGCTTATCAGACAAT+TGG | 0.418185 | 1_1:+25005568 | Msa0015460:CDS |
GTGATACAAAGAGAGCAAAT+TGG | 0.443813 | 1_1:+25004717 | Msa0015460:CDS |
GTAAGAAGAAATCATGGAGT+TGG | 0.448595 | 1_1:+25004594 | Msa0015460:CDS |
ATCATGTGGTGGAGCATGAT+TGG | 0.450402 | 1_1:+25004655 | Msa0015460:CDS |
AATTATGTTAGTCTCATTTG+AGG | 0.462042 | 1_1:+25005371 | Msa0015460:intron |
AGAAAGGTAAGAAGAAATCA+TGG | 0.465978 | 1_1:+25004588 | Msa0015460:CDS |
TGGCTAAGGAAGCATTGGTT+AGG | 0.478204 | 1_1:+25006560 | Msa0015460:CDS |
TGTGAATCAGGTAATGCAAC+AGG | 0.482738 | 1_1:+25006194 | Msa0015460:intron |
TCTTGGCAAGCAATGGCATA+TGG | 0.488135 | 1_1:+25006288 | Msa0015460:CDS |
AGCAGCAGAGTGTTTGGCTA+AGG | 0.497684 | 1_1:+25006546 | Msa0015460:CDS |
GAGACAGAATTGTGGTACTT+AGG | 0.501693 | 1_1:+25004741 | Msa0015460:CDS |
TTCTAAAGCTTCAGAACTTG+TGG | 0.505454 | 1_1:+25006226 | Msa0015460:CDS |
AAAGCTTCAGAACTTGTGGT+TGG | 0.510242 | 1_1:+25006230 | Msa0015460:CDS |
ATTGACTTGCACAGGCACTT+CGG | 0.511916 | 1_1:+25004541 | Msa0015460:intron |
AAACACTCTGCTGCTTCTTG+TGG | 0.521856 | 1_1:-25006538 | None:intergenic |
CTCATGTTTAGGAAATAGAA+AGG | 0.530586 | 1_1:+25004572 | Msa0015460:CDS |
GTGTTTGGCTAAGGAAGCAT+TGG | 0.535898 | 1_1:+25006555 | Msa0015460:CDS |
ATCAATCATCCAAGAAACAT+TGG | 0.538131 | 1_1:+25005599 | Msa0015460:CDS |
GAGTTGGAAGCAAGCCATCA+TGG | 0.546613 | 1_1:+25004610 | Msa0015460:CDS |
GGCAAGCAATGGCATATGGC+AGG | 0.549047 | 1_1:+25006292 | Msa0015460:CDS |
GAATCTTATCAGGCACATAG+AGG | 0.593854 | 1_1:+25006513 | Msa0015460:CDS |
AGTTCTGTAATCTCCGATGT+TGG | 0.599281 | 1_1:-25005530 | None:intergenic |
AGGTAATGCAACAGGTACAA+AGG | 0.604493 | 1_1:+25006202 | Msa0015460:intron |
TTTGTGATCTTGGCAAGCAA+TGG | 0.607158 | 1_1:+25006281 | Msa0015460:CDS |
ATCACATGGTCATCATGTGG+TGG | 0.639046 | 1_1:+25004644 | Msa0015460:CDS |
GATATTGGCATCATCCATGA+TGG | 0.650715 | 1_1:-25004624 | None:intergenic |
AAACTCGTGCTAGCCAACAT+CGG | 0.656947 | 1_1:+25005517 | Msa0015460:CDS |
ACACTCAAGAGAGCATACCT+AGG | 0.689445 | 1_1:+25005409 | Msa0015460:CDS |
TGGATGATGCCAATATCACA+TGG | 0.692201 | 1_1:+25004630 | Msa0015460:CDS |
AAATTGGTGAGACAGAATTG+TGG | 0.696148 | 1_1:+25004733 | Msa0015460:CDS |
AATATCACATGGTCATCATG+TGG | 0.739236 | 1_1:+25004641 | Msa0015460:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAGAAAACAAATATTTAA+GGG | + | chr1_1:25004443-25004462 | Msa0015460:intron | 10.0% |
!! | ATAAGAAAACAAATATTTAA+GGG | + | chr1_1:25004443-25004462 | Msa0015460:intron | 10.0% |
!! | CATAAGAAAACAAATATTTA+AGG | + | chr1_1:25004442-25004461 | Msa0015460:intron | 15.0% |
!! | TTTAAGGGAAAAATAATATA+TGG | + | chr1_1:25004458-25004477 | Msa0015460:intron | 15.0% |
!! | CATAAGAAAACAAATATTTA+AGG | + | chr1_1:25004442-25004461 | Msa0015460:intron | 15.0% |
!! | TTTAAGGGAAAAATAATATA+TGG | + | chr1_1:25004458-25004477 | Msa0015460:intron | 15.0% |
!! | TAAAGAACATAATCTCATAA+GGG | - | chr1_1:25004490-25004509 | None:intergenic | 20.0% |
!! | ATAAAGAACATAATCTCATA+AGG | - | chr1_1:25004491-25004510 | None:intergenic | 20.0% |
!! | TACTTTAATGAAGAGTAAAA+GGG | + | chr1_1:25005243-25005262 | Msa0015460:intron | 20.0% |
!! | GAGAAAATAGGAAATTATAT+GGG | - | chr1_1:25005308-25005327 | None:intergenic | 20.0% |
!! | TGAGAAAATAGGAAATTATA+TGG | - | chr1_1:25005309-25005328 | None:intergenic | 20.0% |
!!! | TCTTTTTGAAATGTTTAGAA+TGG | + | chr1_1:25005662-25005681 | Msa0015460:intron | 20.0% |
!! | TAATATTGTTATATTGAGAG+AGG | - | chr1_1:25006068-25006087 | None:intergenic | 20.0% |
!!! | CTATAAATGAGTATATGTTT+TGG | + | chr1_1:25006118-25006137 | Msa0015460:intron | 20.0% |
!!! | TTGTAATGGATAAATATCTT+GGG | - | chr1_1:25006323-25006342 | None:intergenic | 20.0% |
!!! | TTTGTAATGGATAAATATCT+TGG | - | chr1_1:25006324-25006343 | None:intergenic | 20.0% |
!! | GAATGATTAAACATGAAATA+TGG | - | chr1_1:25006597-25006616 | None:intergenic | 20.0% |
!! | TAAAGAACATAATCTCATAA+GGG | - | chr1_1:25004490-25004509 | None:intergenic | 20.0% |
!! | ATAAAGAACATAATCTCATA+AGG | - | chr1_1:25004491-25004510 | None:intergenic | 20.0% |
!! | TACTTTAATGAAGAGTAAAA+GGG | + | chr1_1:25005243-25005262 | Msa0015460:intron | 20.0% |
!! | GAGAAAATAGGAAATTATAT+GGG | - | chr1_1:25005308-25005327 | None:intergenic | 20.0% |
!! | TGAGAAAATAGGAAATTATA+TGG | - | chr1_1:25005309-25005328 | None:intergenic | 20.0% |
!!! | TCTTTTTGAAATGTTTAGAA+TGG | + | chr1_1:25005662-25005681 | Msa0015460:intron | 20.0% |
!! | TAATATTGTTATATTGAGAG+AGG | - | chr1_1:25006068-25006087 | None:intergenic | 20.0% |
!!! | CTATAAATGAGTATATGTTT+TGG | + | chr1_1:25006118-25006137 | Msa0015460:intron | 20.0% |
!!! | TTGTAATGGATAAATATCTT+GGG | - | chr1_1:25006323-25006342 | None:intergenic | 20.0% |
!!! | TTTGTAATGGATAAATATCT+TGG | - | chr1_1:25006324-25006343 | None:intergenic | 20.0% |
!! | GAATGATTAAACATGAAATA+TGG | - | chr1_1:25006597-25006616 | None:intergenic | 20.0% |
!!! | ATAATTGGCTTGCAAATATT+TGG | - | chr1_1:25004799-25004818 | None:intergenic | 25.0% |
! | GAGATTCTTGTCAAAATAAT+TGG | - | chr1_1:25004814-25004833 | None:intergenic | 25.0% |
!! | TCTATTTTCATAAGCTATCT+TGG | + | chr1_1:25005056-25005075 | Msa0015460:intron | 25.0% |
! | GAAAGTTTATGGATATAAGA+TGG | + | chr1_1:25005078-25005097 | Msa0015460:intron | 25.0% |
! | GTACTTTAATGAAGAGTAAA+AGG | + | chr1_1:25005242-25005261 | Msa0015460:intron | 25.0% |
!! | AATTATGTTAGTCTCATTTG+AGG | + | chr1_1:25005371-25005390 | Msa0015460:intron | 25.0% |
! | ACATCTGTGATGATAATAAA+TGG | + | chr1_1:25005490-25005509 | Msa0015460:CDS | 25.0% |
! | TAAGCTATGAAAATAGCTTA+TGG | + | chr1_1:25005847-25005866 | Msa0015460:intron | 25.0% |
!!! | TCCATCTTTTTCATTCAATT+GGG | + | chr1_1:25006015-25006034 | Msa0015460:intron | 25.0% |
!!! | TGTAATGGATAAATATCTTG+GGG | - | chr1_1:25006322-25006341 | None:intergenic | 25.0% |
!!! | TTACTCGGAATTTTTTGTAA+TGG | - | chr1_1:25006337-25006356 | None:intergenic | 25.0% |
!!! | ATAATTGGCTTGCAAATATT+TGG | - | chr1_1:25004799-25004818 | None:intergenic | 25.0% |
! | GAGATTCTTGTCAAAATAAT+TGG | - | chr1_1:25004814-25004833 | None:intergenic | 25.0% |
!! | TCTATTTTCATAAGCTATCT+TGG | + | chr1_1:25005056-25005075 | Msa0015460:intron | 25.0% |
! | GAAAGTTTATGGATATAAGA+TGG | + | chr1_1:25005078-25005097 | Msa0015460:intron | 25.0% |
! | GTACTTTAATGAAGAGTAAA+AGG | + | chr1_1:25005242-25005261 | Msa0015460:intron | 25.0% |
!! | AATTATGTTAGTCTCATTTG+AGG | + | chr1_1:25005371-25005390 | Msa0015460:intron | 25.0% |
! | ACATCTGTGATGATAATAAA+TGG | + | chr1_1:25005490-25005509 | Msa0015460:CDS | 25.0% |
! | TAAGCTATGAAAATAGCTTA+TGG | + | chr1_1:25005847-25005866 | Msa0015460:intron | 25.0% |
!!! | TCCATCTTTTTCATTCAATT+GGG | + | chr1_1:25006015-25006034 | Msa0015460:intron | 25.0% |
!!! | TGTAATGGATAAATATCTTG+GGG | - | chr1_1:25006322-25006341 | None:intergenic | 25.0% |
!!! | TTACTCGGAATTTTTTGTAA+TGG | - | chr1_1:25006337-25006356 | None:intergenic | 25.0% |
! | AGATTTTCACTTCAAAGTCA+AGG | + | chr1_1:25004361-25004380 | Msa0015460:CDS | 30.0% |
CTTCATGTAACAATGGAATA+AGG | - | chr1_1:25004409-25004428 | None:intergenic | 30.0% | |
CTTATTCCATTGTTACATGA+AGG | + | chr1_1:25004407-25004426 | Msa0015460:intron | 30.0% | |
CTCATGTTTAGGAAATAGAA+AGG | + | chr1_1:25004572-25004591 | Msa0015460:CDS | 30.0% | |
AGAAAGGTAAGAAGAAATCA+TGG | + | chr1_1:25004588-25004607 | Msa0015460:CDS | 30.0% | |
CTTAGGAATCTTTGATACTT+TGG | + | chr1_1:25004758-25004777 | Msa0015460:CDS | 30.0% | |
! | TTTTGACAAGAATCTCAAAG+AGG | + | chr1_1:25004818-25004837 | Msa0015460:CDS | 30.0% |
AAGCTATCTTGGAAAGTTTA+TGG | + | chr1_1:25005067-25005086 | Msa0015460:intron | 30.0% | |
GTCTTTGCTTGTTTACTTAT+TGG | + | chr1_1:25005218-25005237 | Msa0015460:intron | 30.0% | |
GCAATAAATCACAATGCATT+TGG | - | chr1_1:25005270-25005289 | None:intergenic | 30.0% | |
! | CCAGAAGTATATGAGAAAAT+AGG | - | chr1_1:25005320-25005339 | None:intergenic | 30.0% |
! | CCTATTTTCTCATATACTTC+TGG | + | chr1_1:25005317-25005336 | Msa0015460:intron | 30.0% |
ATCAATCATCCAAGAAACAT+TGG | + | chr1_1:25005599-25005618 | Msa0015460:CDS | 30.0% | |
GCTTATGGACATATTATAAG+TGG | + | chr1_1:25005862-25005881 | Msa0015460:intron | 30.0% | |
! | ATAAGCATTTGAGATGGTTT+GGG | - | chr1_1:25005902-25005921 | None:intergenic | 30.0% |
!! | ACTGATTTGTTTCCTACTTA+GGG | - | chr1_1:25005964-25005983 | None:intergenic | 30.0% |
!! | AACTGATTTGTTTCCTACTT+AGG | - | chr1_1:25005965-25005984 | None:intergenic | 30.0% |
!! | CTCCATCTTTTTCATTCAAT+TGG | + | chr1_1:25006014-25006033 | Msa0015460:intron | 30.0% |
TCCCAATTGAATGAAAAAGA+TGG | - | chr1_1:25006019-25006038 | None:intergenic | 30.0% | |
TTGGCAGTCACATTTAATAA+TGG | + | chr1_1:25006137-25006156 | Msa0015460:intron | 30.0% | |
AAAGTAATAGCATGTGAATC+AGG | + | chr1_1:25006182-25006201 | Msa0015460:intron | 30.0% | |
! | TAGTACTGAATTTGTGATCT+TGG | + | chr1_1:25006271-25006290 | Msa0015460:CDS | 30.0% |
! | ATCCTCGAAAATGTTTTACT+CGG | - | chr1_1:25006352-25006371 | None:intergenic | 30.0% |
TTCATCACCTACAAATACAT+AGG | - | chr1_1:25006478-25006497 | None:intergenic | 30.0% | |
! | AGATTTTCACTTCAAAGTCA+AGG | + | chr1_1:25004361-25004380 | Msa0015460:CDS | 30.0% |
CTTCATGTAACAATGGAATA+AGG | - | chr1_1:25004409-25004428 | None:intergenic | 30.0% | |
CTTATTCCATTGTTACATGA+AGG | + | chr1_1:25004407-25004426 | Msa0015460:intron | 30.0% | |
CTCATGTTTAGGAAATAGAA+AGG | + | chr1_1:25004572-25004591 | Msa0015460:CDS | 30.0% | |
AGAAAGGTAAGAAGAAATCA+TGG | + | chr1_1:25004588-25004607 | Msa0015460:CDS | 30.0% | |
CTTAGGAATCTTTGATACTT+TGG | + | chr1_1:25004758-25004777 | Msa0015460:CDS | 30.0% | |
! | TTTTGACAAGAATCTCAAAG+AGG | + | chr1_1:25004818-25004837 | Msa0015460:CDS | 30.0% |
AAGCTATCTTGGAAAGTTTA+TGG | + | chr1_1:25005067-25005086 | Msa0015460:intron | 30.0% | |
GTCTTTGCTTGTTTACTTAT+TGG | + | chr1_1:25005218-25005237 | Msa0015460:intron | 30.0% | |
GCAATAAATCACAATGCATT+TGG | - | chr1_1:25005270-25005289 | None:intergenic | 30.0% | |
! | CCAGAAGTATATGAGAAAAT+AGG | - | chr1_1:25005320-25005339 | None:intergenic | 30.0% |
! | CCTATTTTCTCATATACTTC+TGG | + | chr1_1:25005317-25005336 | Msa0015460:intron | 30.0% |
ATCAATCATCCAAGAAACAT+TGG | + | chr1_1:25005599-25005618 | Msa0015460:CDS | 30.0% | |
GCTTATGGACATATTATAAG+TGG | + | chr1_1:25005862-25005881 | Msa0015460:intron | 30.0% | |
! | ATAAGCATTTGAGATGGTTT+GGG | - | chr1_1:25005902-25005921 | None:intergenic | 30.0% |
!! | ACTGATTTGTTTCCTACTTA+GGG | - | chr1_1:25005964-25005983 | None:intergenic | 30.0% |
!! | AACTGATTTGTTTCCTACTT+AGG | - | chr1_1:25005965-25005984 | None:intergenic | 30.0% |
!! | CTCCATCTTTTTCATTCAAT+TGG | + | chr1_1:25006014-25006033 | Msa0015460:intron | 30.0% |
TCCCAATTGAATGAAAAAGA+TGG | - | chr1_1:25006019-25006038 | None:intergenic | 30.0% | |
TTGGCAGTCACATTTAATAA+TGG | + | chr1_1:25006137-25006156 | Msa0015460:intron | 30.0% | |
AAAGTAATAGCATGTGAATC+AGG | + | chr1_1:25006182-25006201 | Msa0015460:intron | 30.0% | |
! | TAGTACTGAATTTGTGATCT+TGG | + | chr1_1:25006271-25006290 | Msa0015460:CDS | 30.0% |
! | ATCCTCGAAAATGTTTTACT+CGG | - | chr1_1:25006352-25006371 | None:intergenic | 30.0% |
TTCATCACCTACAAATACAT+AGG | - | chr1_1:25006478-25006497 | None:intergenic | 30.0% | |
AAAGAGCCTTCATGTAACAA+TGG | - | chr1_1:25004416-25004435 | None:intergenic | 35.0% | |
!! | GAATTTCTATTGACTTGCAC+AGG | + | chr1_1:25004533-25004552 | Msa0015460:intron | 35.0% |
GTAAGAAGAAATCATGGAGT+TGG | + | chr1_1:25004594-25004613 | Msa0015460:CDS | 35.0% | |
ACATGATGACCATGTGATAT+TGG | - | chr1_1:25004642-25004661 | None:intergenic | 35.0% | |
AATATCACATGGTCATCATG+TGG | + | chr1_1:25004641-25004660 | Msa0015460:CDS | 35.0% | |
GTGATACAAAGAGAGCAAAT+TGG | + | chr1_1:25004717-25004736 | Msa0015460:CDS | 35.0% | |
AAATTGGTGAGACAGAATTG+TGG | + | chr1_1:25004733-25004752 | Msa0015460:CDS | 35.0% | |
GGAATCTTTGATACTTTGGT+TGG | + | chr1_1:25004762-25004781 | Msa0015460:CDS | 35.0% | |
!! | GCTCAAAAGCATCATTGATT+TGG | - | chr1_1:25004899-25004918 | None:intergenic | 35.0% |
! | ATCAATGATGCTTTTGAGCT+TGG | + | chr1_1:25004900-25004919 | Msa0015460:intron | 35.0% |
! | TCAATGATGCTTTTGAGCTT+GGG | + | chr1_1:25004901-25004920 | Msa0015460:intron | 35.0% |
CTCGAATGGAAGAACAAAAT+AGG | + | chr1_1:25004929-25004948 | Msa0015460:intron | 35.0% | |
AGTCTGACAAGTACTTATGT+CGG | + | chr1_1:25005148-25005167 | Msa0015460:intron | 35.0% | |
!!! | TGATCTTTGTTTTTGCACCT+AGG | - | chr1_1:25005429-25005448 | None:intergenic | 35.0% |
TCAGATGAAACATGCATCAT+AGG | + | chr1_1:25005463-25005482 | Msa0015460:CDS | 35.0% | |
! | AGAACTGTTTTGTGTAGAGA+TGG | + | chr1_1:25005547-25005566 | Msa0015460:CDS | 35.0% |
TCTGTGATACCAATGTTTCT+TGG | - | chr1_1:25005611-25005630 | None:intergenic | 35.0% | |
!!! | TGGTATCACAGACTTTTTTC+AGG | + | chr1_1:25005619-25005638 | Msa0015460:CDS | 35.0% |
!! | AATGGCTATGTCGATTCATT+TGG | + | chr1_1:25005680-25005699 | Msa0015460:intron | 35.0% |
!! | ATGGCTATGTCGATTCATTT+GGG | + | chr1_1:25005681-25005700 | Msa0015460:intron | 35.0% |
AAGCAGTATTAGGTCATGTT+TGG | + | chr1_1:25005711-25005730 | Msa0015460:intron | 35.0% | |
! | CATAAGCATTTGAGATGGTT+TGG | - | chr1_1:25005903-25005922 | None:intergenic | 35.0% |
ACTGTCATAAGCATTTGAGA+TGG | - | chr1_1:25005908-25005927 | None:intergenic | 35.0% | |
! | TTTCCTACTTAGGGTTTGTT+TGG | - | chr1_1:25005955-25005974 | None:intergenic | 35.0% |
!! | TTCTAAAGCTTCAGAACTTG+TGG | + | chr1_1:25006226-25006245 | Msa0015460:CDS | 35.0% |
AACTTGTGGTTGGAAGTTAT+TGG | + | chr1_1:25006240-25006259 | Msa0015460:CDS | 35.0% | |
! | TTCCGAGTAAAACATTTTCG+AGG | + | chr1_1:25006347-25006366 | Msa0015460:intron | 35.0% |
TGAGTCTCCTATGTATTTGT+AGG | + | chr1_1:25006468-25006487 | Msa0015460:intron | 35.0% | |
TGATAAGATTCACTGCTTCT+TGG | - | chr1_1:25006504-25006523 | None:intergenic | 35.0% | |
AAGAAGCAGTGAATCTTATC+AGG | + | chr1_1:25006503-25006522 | Msa0015460:CDS | 35.0% | |
AAAGAGCCTTCATGTAACAA+TGG | - | chr1_1:25004416-25004435 | None:intergenic | 35.0% | |
!! | GAATTTCTATTGACTTGCAC+AGG | + | chr1_1:25004533-25004552 | Msa0015460:intron | 35.0% |
GTAAGAAGAAATCATGGAGT+TGG | + | chr1_1:25004594-25004613 | Msa0015460:CDS | 35.0% | |
ACATGATGACCATGTGATAT+TGG | - | chr1_1:25004642-25004661 | None:intergenic | 35.0% | |
AATATCACATGGTCATCATG+TGG | + | chr1_1:25004641-25004660 | Msa0015460:CDS | 35.0% | |
GTGATACAAAGAGAGCAAAT+TGG | + | chr1_1:25004717-25004736 | Msa0015460:CDS | 35.0% | |
AAATTGGTGAGACAGAATTG+TGG | + | chr1_1:25004733-25004752 | Msa0015460:CDS | 35.0% | |
GGAATCTTTGATACTTTGGT+TGG | + | chr1_1:25004762-25004781 | Msa0015460:CDS | 35.0% | |
!! | GCTCAAAAGCATCATTGATT+TGG | - | chr1_1:25004899-25004918 | None:intergenic | 35.0% |
! | ATCAATGATGCTTTTGAGCT+TGG | + | chr1_1:25004900-25004919 | Msa0015460:intron | 35.0% |
! | TCAATGATGCTTTTGAGCTT+GGG | + | chr1_1:25004901-25004920 | Msa0015460:intron | 35.0% |
CTCGAATGGAAGAACAAAAT+AGG | + | chr1_1:25004929-25004948 | Msa0015460:intron | 35.0% | |
AGTCTGACAAGTACTTATGT+CGG | + | chr1_1:25005148-25005167 | Msa0015460:intron | 35.0% | |
!!! | TGATCTTTGTTTTTGCACCT+AGG | - | chr1_1:25005429-25005448 | None:intergenic | 35.0% |
TCAGATGAAACATGCATCAT+AGG | + | chr1_1:25005463-25005482 | Msa0015460:CDS | 35.0% | |
! | AGAACTGTTTTGTGTAGAGA+TGG | + | chr1_1:25005547-25005566 | Msa0015460:CDS | 35.0% |
TCTGTGATACCAATGTTTCT+TGG | - | chr1_1:25005611-25005630 | None:intergenic | 35.0% | |
!!! | TGGTATCACAGACTTTTTTC+AGG | + | chr1_1:25005619-25005638 | Msa0015460:CDS | 35.0% |
!! | AATGGCTATGTCGATTCATT+TGG | + | chr1_1:25005680-25005699 | Msa0015460:intron | 35.0% |
!! | ATGGCTATGTCGATTCATTT+GGG | + | chr1_1:25005681-25005700 | Msa0015460:intron | 35.0% |
AAGCAGTATTAGGTCATGTT+TGG | + | chr1_1:25005711-25005730 | Msa0015460:intron | 35.0% | |
! | CATAAGCATTTGAGATGGTT+TGG | - | chr1_1:25005903-25005922 | None:intergenic | 35.0% |
ACTGTCATAAGCATTTGAGA+TGG | - | chr1_1:25005908-25005927 | None:intergenic | 35.0% | |
! | TTTCCTACTTAGGGTTTGTT+TGG | - | chr1_1:25005955-25005974 | None:intergenic | 35.0% |
!! | TTCTAAAGCTTCAGAACTTG+TGG | + | chr1_1:25006226-25006245 | Msa0015460:CDS | 35.0% |
AACTTGTGGTTGGAAGTTAT+TGG | + | chr1_1:25006240-25006259 | Msa0015460:CDS | 35.0% | |
! | TTCCGAGTAAAACATTTTCG+AGG | + | chr1_1:25006347-25006366 | Msa0015460:intron | 35.0% |
TGAGTCTCCTATGTATTTGT+AGG | + | chr1_1:25006468-25006487 | Msa0015460:intron | 35.0% | |
TGATAAGATTCACTGCTTCT+TGG | - | chr1_1:25006504-25006523 | None:intergenic | 35.0% | |
AAGAAGCAGTGAATCTTATC+AGG | + | chr1_1:25006503-25006522 | Msa0015460:CDS | 35.0% | |
GATATTGGCATCATCCATGA+TGG | - | chr1_1:25004627-25004646 | None:intergenic | 40.0% | |
TGGATGATGCCAATATCACA+TGG | + | chr1_1:25004630-25004649 | Msa0015460:CDS | 40.0% | |
GTGGAGCATGATTGGATTAA+TGG | + | chr1_1:25004663-25004682 | Msa0015460:CDS | 40.0% | |
GAGACAGAATTGTGGTACTT+AGG | + | chr1_1:25004741-25004760 | Msa0015460:CDS | 40.0% | |
TGCTCTCTTGAGTGTTTCTT+TGG | - | chr1_1:25005404-25005423 | None:intergenic | 40.0% | |
AGTTCTGTAATCTCCGATGT+TGG | - | chr1_1:25005533-25005552 | None:intergenic | 40.0% | |
!! | ATGTCGATTCATTTGGGAGA+TGG | + | chr1_1:25005687-25005706 | Msa0015460:intron | 40.0% |
! | AGATGGTTTGGGAGAACTTA+TGG | - | chr1_1:25005891-25005910 | None:intergenic | 40.0% |
AGTCCAAACAAACCCTAAGT+AGG | + | chr1_1:25005949-25005968 | Msa0015460:intron | 40.0% | |
TGTGAATCAGGTAATGCAAC+AGG | + | chr1_1:25006194-25006213 | Msa0015460:intron | 40.0% | |
AGGTAATGCAACAGGTACAA+AGG | + | chr1_1:25006202-25006221 | Msa0015460:intron | 40.0% | |
AAAGCTTCAGAACTTGTGGT+TGG | + | chr1_1:25006230-25006249 | Msa0015460:CDS | 40.0% | |
TTTGTGATCTTGGCAAGCAA+TGG | + | chr1_1:25006281-25006300 | Msa0015460:CDS | 40.0% | |
GAATCTTATCAGGCACATAG+AGG | + | chr1_1:25006513-25006532 | Msa0015460:CDS | 40.0% | |
GATATTGGCATCATCCATGA+TGG | - | chr1_1:25004627-25004646 | None:intergenic | 40.0% | |
TGGATGATGCCAATATCACA+TGG | + | chr1_1:25004630-25004649 | Msa0015460:CDS | 40.0% | |
GTGGAGCATGATTGGATTAA+TGG | + | chr1_1:25004663-25004682 | Msa0015460:CDS | 40.0% | |
GAGACAGAATTGTGGTACTT+AGG | + | chr1_1:25004741-25004760 | Msa0015460:CDS | 40.0% | |
TGCTCTCTTGAGTGTTTCTT+TGG | - | chr1_1:25005404-25005423 | None:intergenic | 40.0% | |
AGTTCTGTAATCTCCGATGT+TGG | - | chr1_1:25005533-25005552 | None:intergenic | 40.0% | |
!! | ATGTCGATTCATTTGGGAGA+TGG | + | chr1_1:25005687-25005706 | Msa0015460:intron | 40.0% |
! | AGATGGTTTGGGAGAACTTA+TGG | - | chr1_1:25005891-25005910 | None:intergenic | 40.0% |
AGTCCAAACAAACCCTAAGT+AGG | + | chr1_1:25005949-25005968 | Msa0015460:intron | 40.0% | |
TGTGAATCAGGTAATGCAAC+AGG | + | chr1_1:25006194-25006213 | Msa0015460:intron | 40.0% | |
AGGTAATGCAACAGGTACAA+AGG | + | chr1_1:25006202-25006221 | Msa0015460:intron | 40.0% | |
AAAGCTTCAGAACTTGTGGT+TGG | + | chr1_1:25006230-25006249 | Msa0015460:CDS | 40.0% | |
TTTGTGATCTTGGCAAGCAA+TGG | + | chr1_1:25006281-25006300 | Msa0015460:CDS | 40.0% | |
GAATCTTATCAGGCACATAG+AGG | + | chr1_1:25006513-25006532 | Msa0015460:CDS | 40.0% | |
!! | ATTGACTTGCACAGGCACTT+CGG | + | chr1_1:25004541-25004560 | Msa0015460:intron | 45.0% |
CGGGTGAAACTCTCATGTTT+AGG | + | chr1_1:25004561-25004580 | Msa0015460:CDS | 45.0% | |
ATCACATGGTCATCATGTGG+TGG | + | chr1_1:25004644-25004663 | Msa0015460:CDS | 45.0% | |
! | ATCATGTGGTGGAGCATGAT+TGG | + | chr1_1:25004655-25004674 | Msa0015460:CDS | 45.0% |
! | ACACTCAAGAGAGCATACCT+AGG | + | chr1_1:25005409-25005428 | Msa0015460:CDS | 45.0% |
AAACTCGTGCTAGCCAACAT+CGG | + | chr1_1:25005517-25005536 | Msa0015460:CDS | 45.0% | |
GGCGTAGCTTATCAGACAAT+TGG | + | chr1_1:25005568-25005587 | Msa0015460:CDS | 45.0% | |
GGGAGATGGAAAGCAGTATT+AGG | + | chr1_1:25005701-25005720 | Msa0015460:intron | 45.0% | |
GCTAATTCAGTGCTGCATTC+TGG | - | chr1_1:25005995-25006014 | None:intergenic | 45.0% | |
TCTTGGCAAGCAATGGCATA+TGG | + | chr1_1:25006288-25006307 | Msa0015460:CDS | 45.0% | |
! | AAACACTCTGCTGCTTCTTG+TGG | - | chr1_1:25006541-25006560 | None:intergenic | 45.0% |
! | ACAAGAAGCAGCAGAGTGTT+TGG | + | chr1_1:25006540-25006559 | Msa0015460:CDS | 45.0% |
! | GTGTTTGGCTAAGGAAGCAT+TGG | + | chr1_1:25006555-25006574 | Msa0015460:CDS | 45.0% |
!! | TGGCTAAGGAAGCATTGGTT+AGG | + | chr1_1:25006560-25006579 | Msa0015460:CDS | 45.0% |
!! | ATTGACTTGCACAGGCACTT+CGG | + | chr1_1:25004541-25004560 | Msa0015460:intron | 45.0% |
CGGGTGAAACTCTCATGTTT+AGG | + | chr1_1:25004561-25004580 | Msa0015460:CDS | 45.0% | |
ATCACATGGTCATCATGTGG+TGG | + | chr1_1:25004644-25004663 | Msa0015460:CDS | 45.0% | |
! | ATCATGTGGTGGAGCATGAT+TGG | + | chr1_1:25004655-25004674 | Msa0015460:CDS | 45.0% |
! | ACACTCAAGAGAGCATACCT+AGG | + | chr1_1:25005409-25005428 | Msa0015460:CDS | 45.0% |
AAACTCGTGCTAGCCAACAT+CGG | + | chr1_1:25005517-25005536 | Msa0015460:CDS | 45.0% | |
GGCGTAGCTTATCAGACAAT+TGG | + | chr1_1:25005568-25005587 | Msa0015460:CDS | 45.0% | |
GGGAGATGGAAAGCAGTATT+AGG | + | chr1_1:25005701-25005720 | Msa0015460:intron | 45.0% | |
GCTAATTCAGTGCTGCATTC+TGG | - | chr1_1:25005995-25006014 | None:intergenic | 45.0% | |
TCTTGGCAAGCAATGGCATA+TGG | + | chr1_1:25006288-25006307 | Msa0015460:CDS | 45.0% | |
! | AAACACTCTGCTGCTTCTTG+TGG | - | chr1_1:25006541-25006560 | None:intergenic | 45.0% |
! | ACAAGAAGCAGCAGAGTGTT+TGG | + | chr1_1:25006540-25006559 | Msa0015460:CDS | 45.0% |
! | GTGTTTGGCTAAGGAAGCAT+TGG | + | chr1_1:25006555-25006574 | Msa0015460:CDS | 45.0% |
!! | TGGCTAAGGAAGCATTGGTT+AGG | + | chr1_1:25006560-25006579 | Msa0015460:CDS | 45.0% |
!!! | GTTTTTTTTAAAAAATTAAT+AGG | + | chr1_1:25006424-25006443 | Msa0015460:intron | 5.0% |
!!! | GTTTTTTTTAAAAAATTAAT+AGG | + | chr1_1:25006424-25006443 | Msa0015460:intron | 5.0% |
!! | TTGACTTGCACAGGCACTTC+GGG | + | chr1_1:25004542-25004561 | Msa0015460:intron | 50.0% |
GAGTTGGAAGCAAGCCATCA+TGG | + | chr1_1:25004610-25004629 | Msa0015460:CDS | 50.0% | |
! | AGCAGCAGAGTGTTTGGCTA+AGG | + | chr1_1:25006546-25006565 | Msa0015460:CDS | 50.0% |
!! | TTGACTTGCACAGGCACTTC+GGG | + | chr1_1:25004542-25004561 | Msa0015460:intron | 50.0% |
GAGTTGGAAGCAAGCCATCA+TGG | + | chr1_1:25004610-25004629 | Msa0015460:CDS | 50.0% | |
! | AGCAGCAGAGTGTTTGGCTA+AGG | + | chr1_1:25006546-25006565 | Msa0015460:CDS | 50.0% |
GAGCTTGGGAGACTCTCGAA+TGG | + | chr1_1:25004915-25004934 | Msa0015460:intron | 55.0% | |
GGCAAGCAATGGCATATGGC+AGG | + | chr1_1:25006292-25006311 | Msa0015460:CDS | 55.0% | |
GAGCTTGGGAGACTCTCGAA+TGG | + | chr1_1:25004915-25004934 | Msa0015460:intron | 55.0% | |
GGCAAGCAATGGCATATGGC+AGG | + | chr1_1:25006292-25006311 | Msa0015460:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_1 | gene | 25004350 | 25006627 | 25004350 | ID=Msa0015460;Name=Msa0015460 |
chr1_1 | mRNA | 25004350 | 25006627 | 25004350 | ID=Msa0015460-mRNA-1;Parent=Msa0015460;Name=Msa0015460-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|1|1|1|5|0|274 |
chr1_1 | exon | 25004350 | 25004382 | 25004350 | ID=Msa0015460-mRNA-1:exon:8603;Parent=Msa0015460-mRNA-1 |
chr1_1 | exon | 25004555 | 25004839 | 25004555 | ID=Msa0015460-mRNA-1:exon:8604;Parent=Msa0015460-mRNA-1 |
chr1_1 | exon | 25005382 | 25005640 | 25005382 | ID=Msa0015460-mRNA-1:exon:8605;Parent=Msa0015460-mRNA-1 |
chr1_1 | exon | 25006204 | 25006313 | 25006204 | ID=Msa0015460-mRNA-1:exon:8606;Parent=Msa0015460-mRNA-1 |
chr1_1 | exon | 25006490 | 25006627 | 25006490 | ID=Msa0015460-mRNA-1:exon:8607;Parent=Msa0015460-mRNA-1 |
chr1_1 | CDS | 25004350 | 25004382 | 25004350 | ID=Msa0015460-mRNA-1:cds;Parent=Msa0015460-mRNA-1 |
chr1_1 | CDS | 25004555 | 25004839 | 25004555 | ID=Msa0015460-mRNA-1:cds;Parent=Msa0015460-mRNA-1 |
chr1_1 | CDS | 25005382 | 25005640 | 25005382 | ID=Msa0015460-mRNA-1:cds;Parent=Msa0015460-mRNA-1 |
chr1_1 | CDS | 25006204 | 25006313 | 25006204 | ID=Msa0015460-mRNA-1:cds;Parent=Msa0015460-mRNA-1 |
chr1_1 | CDS | 25006490 | 25006627 | 25006490 | ID=Msa0015460-mRNA-1:cds;Parent=Msa0015460-mRNA-1 |
Gene Sequence |
Protein sequence |