AlfalfaGEDB | Msa0849810

M. sativa cultivar zhongmu-4 / Msa0849810

KEGG: -
GO: GO:0000166 GO:0001101 GO:0002376 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009627 GO:0009719 GO:0009725 GO:0009733 GO:0009751 GO:0009814 GO:0009862 GO:0009863 GO:0009987 GO:0010033 GO:0014070 GO:0023052 GO:0032870 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0046677 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701
PFAM: PF00069.28

Nr:

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Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0849810	CAE00640.1	82.203	590	14	4	1	531	18	575	0.0	945
Msa0849810	CAE00640.1	88.722	133	15	0	2401	2533	443	575	9.75e-69	256
Msa0849810	CAE00640.1	88.806	134	15	0	1378	1511	442	575	1.76e-69	258

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Swissprot:

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Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0849810	sp\|O81472\|MP3K2_ARATH	53.003	383	120	4	206	532	380	758	5.71e-112	380
Msa0849810	sp\|O81472\|MP3K2_ARATH	64.336	143	47	2	1374	1512	616	758	8.64e-50	195
Msa0849810	sp\|O81472\|MP3K2_ARATH	65.672	134	45	1	2401	2533	624	757	3.74e-48	190
Msa0849810	sp\|O81472\|MP3K2_ARATH	44.231	104	42	4	10	109	123	214	7.95e-12	75.1

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Trembl:

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Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0849810	Q7XTK4	82.203	590	14	4	1	531	18	575	0.0	945
Msa0849810	Q7XTK4	88.722	133	15	0	2401	2533	443	575	4.66e-69	256
Msa0849810	Q7XTK4	88.806	134	15	0	1378	1511	442	575	8.41e-70	258

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TFs/TRs:

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Gene ID	Type	Classification
No data available in table

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Protein Kinases:

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Gene ID	Type	Classification
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Network:

Co-expression Network

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Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0003630	Msa0849810	0.807236	5.578825e-50	-8.615850e-47
Msa0008220	Msa0849810	0.822161	2.746927e-53	-8.615850e-47
Msa0010770	Msa0849810	0.818638	1.765600e-52	-8.615850e-47
Msa0012710	Msa0849810	0.818886	1.551243e-52	-8.615850e-47
Msa0017320	Msa0849810	0.810306	1.230864e-50	-8.615850e-47
Msa0039250	Msa0849810	0.804756	1.853695e-49	-8.615850e-47
Msa0040620	Msa0849810	0.800411	1.459600e-48	-8.615850e-47
Msa0041690	Msa0849810	0.804492	2.104909e-49	-8.615850e-47
Msa0042550	Msa0849810	0.828086	1.093270e-54	-8.615850e-47
Msa0043500	Msa0849810	0.834476	2.932304e-56	-8.615850e-47

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PPI

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Gene1	Gene2	Type
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Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0849810	MtrunA17_Chr5g0424651	75.212	589	58	5	1	531	18	576	0.0	829
Msa0849810	MtrunA17_Chr5g0424651	88.806	134	15	0	1378	1511	443	576	2.41e-72	255
Msa0849810	MtrunA17_Chr5g0424651	88.722	133	15	0	2401	2533	444	576	1.31e-71	253
Msa0849810	MtrunA17_Chr5g0424501	78.846	312	55	3	229	531	138	447	8.80e-156	491
Msa0849810	MtrunA17_Chr5g0424501	88.806	134	15	0	1378	1511	314	447	1.50e-72	251
Msa0849810	MtrunA17_Chr5g0424501	88.722	133	15	0	2401	2533	315	447	8.53e-72	249
Msa0849810	MtrunA17_Chr5g0424501	89.744	39	4	0	56	94	9	47	2.67e-14	78.2
Msa0849810	MtrunA17_Chr5g0424581	95.902	244	10	0	288	531	137	380	9.61e-155	485
Msa0849810	MtrunA17_Chr5g0424581	90.299	134	13	0	1378	1511	247	380	8.63e-76	258
Msa0849810	MtrunA17_Chr5g0424581	90.226	133	13	0	2401	2533	248	380	5.04e-75	256

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Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0849810	AT4G08480.1	53.003	383	120	4	206	532	380	758	5.81e-113	380
Msa0849810	AT4G08480.1	64.336	143	47	2	1374	1512	616	758	8.78e-51	195
Msa0849810	AT4G08480.1	65.672	134	45	1	2401	2533	624	757	3.80e-49	190
Msa0849810	AT4G08480.1	44.231	104	42	4	10	109	123	214	8.08e-13	75.1
Msa0849810	AT4G08500.1	70.732	246	71	1	288	532	345	590	1.76e-108	361
Msa0849810	AT4G08500.1	69.853	136	40	1	1378	1512	455	590	3.38e-55	205
Msa0849810	AT4G08500.1	69.403	134	40	1	2401	2533	456	589	1.50e-53	200
Msa0849810	AT4G08500.1	34.146	246	140	4	10	249	26	255	6.68e-22	103
Msa0849810	AT4G08470.3	65.587	247	84	1	284	529	229	475	5.19e-99	329
Msa0849810	AT4G08470.3	65.414	133	45	1	1378	1509	343	475	8.36e-50	186

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Find 582 sgRNAs with CRISPR-Local

Find 2041 sgRNAs with CRISPR-GE

CRISPR-Local

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CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAAACAATGGCAACACATCG+AGG	0.695381	5_4:+37585298	None:intergenic
AAAAGAGGAAGTTGGTGAAT+TGG	0.354757	5_4:-37607225	Msa0849810:CDS
AAAGCAAAGTGTCGTTCAAC+TGG	0.398169	5_4:-37605539	Msa0849810:CDS
AAAGGATCCAAGAAACGTCT+TGG	0.530833	5_4:+37584315	None:intergenic
AAAGGATCCAAGAAACGTCT+TGG	0.530833	5_4:+37594800	None:intergenic
AAATATATATCAGAGCTTCT+AGG	0.346558	5_4:-37586752	Msa0849810:CDS
AAATATATATCAGAGCTTCT+AGG	0.346558	5_4:-37597237	Msa0849810:CDS
AAATGGATCTGTCAAAGTTG+CGG	0.626421	5_4:-37581773	Msa0849810:CDS
AAATGGATCTGTCAAAGTTG+CGG	0.626421	5_4:-37592260	Msa0849810:CDS
AACAGCTGGTTTAGAGATGG+CGG	0.616020	5_4:+37579684	None:intergenic

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CRISPR-GE

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sgRNA_sequence	Strand	Position	Region	GC_content
GATATTATTTGTCGGAGTTT+AGG	-	chr5_4:37578733-37578752	Msa0849810:intron	30.0%
TGTTTCAATTAGAGATTCTC+CGG	-	chr5_4:37578966-37578985	Msa0849810:intron	30.0%
TGTTTCAATTAGAGATTCTC+CGG	-	chr5_4:37578966-37578985	Msa0849810:intron	30.0%
TGTTTCAATTAGAGATTCTC+CGG	-	chr5_4:37578966-37578985	Msa0849810:intron	30.0%
AGATGAAGTAGAAGAAAAAG+AGG	-	chr5_4:37579332-37579351	Msa0849810:intron	30.0%
ACGGTGAATTTGATGAATTA+CGG	-	chr5_4:37579769-37579788	Msa0849810:intron	30.0%
ATGGCCAAGTAAATAAAAAG+TGG	+	chr5_4:37580112-37580131	None:intergenic	30.0%
ACTTAATAAGTTCCCAAACT+TGG	+	chr5_4:37580139-37580158	None:intergenic	30.0%
ATTGACATTCATAACATACG+TGG	+	chr5_4:37580191-37580210	None:intergenic	30.0%
GCTGAAAAATAGTTTGATGT+TGG	-	chr5_4:37580302-37580321	Msa0849810:CDS	30.0%

Showing 1 to 10 of 2,041 entries

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Chromosome	Type	Strat	End	Strand	Name
chr5_4	gene	37578535	37608059	37578535	ID=Msa0849810;Name=Msa0849810
chr5_4	mRNA	37578535	37608059	37578535	ID=Msa0849810-mRNA-1;Parent=Msa0849810;Name=Msa0849810-mRNA-1;_AED=0.31;_eAED=0.33;_QI=0\|0.37\|0.42\|0.78\|1\|1\|33\|0\|2730
chr5_4	exon	37607173	37608059	37607173	ID=Msa0849810-mRNA-1:exon:12237;Parent=Msa0849810-mRNA-1
chr5_4	exon	37605534	37605618	37605534	ID=Msa0849810-mRNA-1:exon:12236;Parent=Msa0849810-mRNA-1
chr5_4	exon	37605278	37605340	37605278	ID=Msa0849810-mRNA-1:exon:12235;Parent=Msa0849810-mRNA-1
chr5_4	exon	37604196	37604353	37604196	ID=Msa0849810-mRNA-1:exon:12234;Parent=Msa0849810-mRNA-1
chr5_4	exon	37603061	37603133	37603061	ID=Msa0849810-mRNA-1:exon:12233;Parent=Msa0849810-mRNA-1
chr5_4	exon	37602875	37602934	37602875	ID=Msa0849810-mRNA-1:exon:12232;Parent=Msa0849810-mRNA-1
chr5_4	exon	37601320	37601430	37601320	ID=Msa0849810-mRNA-1:exon:12231;Parent=Msa0849810-mRNA-1
chr5_4	exon	37600966	37601120	37600966	ID=Msa0849810-mRNA-1:exon:12230;Parent=Msa0849810-mRNA-1
chr5_4	exon	37596840	37597566	37596840	ID=Msa0849810-mRNA-1:exon:12229;Parent=Msa0849810-mRNA-1
chr5_4	exon	37596054	37596356	37596054	ID=Msa0849810-mRNA-1:exon:12228;Parent=Msa0849810-mRNA-1
chr5_4	exon	37595716	37595810	37595716	ID=Msa0849810-mRNA-1:exon:12227;Parent=Msa0849810-mRNA-1
chr5_4	exon	37594173	37594919	37594173	ID=Msa0849810-mRNA-1:exon:12226;Parent=Msa0849810-mRNA-1
chr5_4	exon	37593241	37593857	37593241	ID=Msa0849810-mRNA-1:exon:12225;Parent=Msa0849810-mRNA-1
chr5_4	exon	37593017	37593068	37593017	ID=Msa0849810-mRNA-1:exon:12224;Parent=Msa0849810-mRNA-1
chr5_4	exon	37592243	37592315	37592243	ID=Msa0849810-mRNA-1:exon:12223;Parent=Msa0849810-mRNA-1
chr5_4	exon	37592086	37592145	37592086	ID=Msa0849810-mRNA-1:exon:12222;Parent=Msa0849810-mRNA-1
chr5_4	exon	37590736	37590846	37590736	ID=Msa0849810-mRNA-1:exon:12221;Parent=Msa0849810-mRNA-1
chr5_4	exon	37590369	37590523	37590369	ID=Msa0849810-mRNA-1:exon:12220;Parent=Msa0849810-mRNA-1
chr5_4	exon	37586355	37587081	37586355	ID=Msa0849810-mRNA-1:exon:12219;Parent=Msa0849810-mRNA-1
chr5_4	exon	37585569	37585871	37585569	ID=Msa0849810-mRNA-1:exon:12218;Parent=Msa0849810-mRNA-1
chr5_4	exon	37585231	37585325	37585231	ID=Msa0849810-mRNA-1:exon:12217;Parent=Msa0849810-mRNA-1
chr5_4	exon	37583688	37584434	37583688	ID=Msa0849810-mRNA-1:exon:12216;Parent=Msa0849810-mRNA-1
chr5_4	exon	37582756	37583372	37582756	ID=Msa0849810-mRNA-1:exon:12215;Parent=Msa0849810-mRNA-1
chr5_4	exon	37582530	37582583	37582530	ID=Msa0849810-mRNA-1:exon:12214;Parent=Msa0849810-mRNA-1
chr5_4	exon	37582347	37582417	37582347	ID=Msa0849810-mRNA-1:exon:12213;Parent=Msa0849810-mRNA-1
chr5_4	exon	37581939	37581991	37581939	ID=Msa0849810-mRNA-1:exon:12212;Parent=Msa0849810-mRNA-1
chr5_4	exon	37581756	37581828	37581756	ID=Msa0849810-mRNA-1:exon:12211;Parent=Msa0849810-mRNA-1
chr5_4	exon	37581599	37581658	37581599	ID=Msa0849810-mRNA-1:exon:12210;Parent=Msa0849810-mRNA-1
chr5_4	exon	37580249	37580359	37580249	ID=Msa0849810-mRNA-1:exon:12209;Parent=Msa0849810-mRNA-1
chr5_4	exon	37579882	37580036	37579882	ID=Msa0849810-mRNA-1:exon:12208;Parent=Msa0849810-mRNA-1
chr5_4	exon	37579338	37579728	37579338	ID=Msa0849810-mRNA-1:exon:12207;Parent=Msa0849810-mRNA-1
chr5_4	exon	37578775	37578826	37578775	ID=Msa0849810-mRNA-1:exon:12206;Parent=Msa0849810-mRNA-1
chr5_4	exon	37578535	37578686	37578535	ID=Msa0849810-mRNA-1:exon:12205;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37607173	37608059	37607173	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37605534	37605618	37605534	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37605278	37605340	37605278	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37604196	37604353	37604196	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37603061	37603133	37603061	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37602875	37602934	37602875	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37601320	37601430	37601320	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37600966	37601120	37600966	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37596840	37597566	37596840	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37596054	37596356	37596054	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37595716	37595810	37595716	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37594173	37594919	37594173	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37593241	37593857	37593241	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37593017	37593068	37593017	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37592243	37592315	37592243	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37592086	37592145	37592086	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37590736	37590846	37590736	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37590369	37590523	37590369	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37586355	37587081	37586355	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37585569	37585871	37585569	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37585231	37585325	37585231	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37583688	37584434	37583688	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37582756	37583372	37582756	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37582530	37582583	37582530	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37582347	37582417	37582347	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37581939	37581991	37581939	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37581756	37581828	37581756	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37581599	37581658	37581599	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37580249	37580359	37580249	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37579882	37580036	37579882	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37579338	37579728	37579338	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37578775	37578826	37578775	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1
chr5_4	CDS	37578535	37578686	37578535	ID=Msa0849810-mRNA-1:cds;Parent=Msa0849810-mRNA-1

Gene Sequence

>Msa0849810

ATGAACTCCAAGAAGAAGAAACAACCCAAGCTACAACGTCGTAATGCGGTGAAGAATTTCAACTACGATGCTCAACCGTCTTCGTCGTCGCCGGAATCTTCCGAGTCGGCGTCGTCGTCGGCGTCGATTCTCTGTACTCGATCGATGGATTTTCATGATCGGAAAAGCTTTAGAGTTGAAGGTGTTGACGGAGAATTTGATATTATTTGTCGGAGTTTAGGGTTGAATGGACCGGAGGATTTCTCGATTCCGGCGGCGGCTTGGGAGGCGATGAAGTTTCGGTCTTCTTCGGATGTTTTGCCGCGGTTGAATGTTTCGGAATTTGATGAAACGAAGACGAGCGGTGAAATTGATCAAGTTGGAGTAGTTGATTGTGATGATAGAGTTTTGGTTAGGGATTCTCCTGCGGAGAGTAGTGGTGGAGAAGTTAATGTTTCAATTAGAGATTCTCCGGTGGAGAGTAGTGGTGGAGAAGTTAATGTTTCAATTAGAGATTCTCCGGTGGAGAGTAGTGGTGGAGAAGTTAATGTTTCAATTAGAGATTCTCCGGCGGAGAGTAGTGGTTGCTGCACCGGCGGTGAAATTAAGGTTCCTGTGAGGGGTTTTGATGAGACAAGCGGTTGTTCAACCGGCAGCGGTGGTATTAAAGGAAATAGACCGCCGATGCTTAAGCCGCCGCCAGGGGTTCGGGTTTCTGTTGTGGATGACACGTGTTCCACTTGGGATATTCTGAGGGATTTTGCTCCGGAAGGCGAAGGAAAAGAGAGAGAAGAAGAAGAAGAAGAGGAAGAGAAGGTAGATGAAGTAGAAGAAAAAGAGGAAGTTGGTGAATTGGAATTGAAGGTAGAAGAAGAGGAAAATGGTGACATTATTGGTGAGTTTTCGAGAGATGGATTCTTTTTTGCTGTAAAACAAGTTTCACTGCTTGATCAAGGGAGTCAGGGAAAGCAAAGTGTCGTTCAACTGGAGCACGAAATTGCACTTCTGAGTCAGTTTGAACATGAGAATATTGTTCGATACATTGGCACTGAAATGGATGAATCAAATCTATATATCTTTATCGAGTTTGTAACCAAAGGTTCCCTTTTAAGCCTATACCGGAGGTATAAACTTAGAGATTCCCAAGTATCTGCTTATACGAGACAGATTCTGCATGGTTTGAAGTATCTTCATGATCGCAATATTGTTCACAGGGATATTAAATGTGCAAATATATTGGTTGATGCAAATGGGTCTGTCAAGGTTGCAGATTTTGGATTGGCAAAGGCAATTAAACTGAATGATGTTAAATCATGCCAAGGAACAGCATTCTGGATGGCACCAGAGGTTGTAAGAGGAAAAGTTAAAGGTTATGGACTTCCGGCTGATATATGGAGTCTAGGATGCACTGTGTTGGAGATGTTAACTGGGAAAATCCCATACTCTCCTATGGAATGTATCAGCGCCATGTTTAGAATTGGAAAAGGTGAACTACCTCCAGTGCCTGATACTCTTTCAAGAGATGCACGCGATTTTATTCTGCAGTGTCTTAAAGTTAATCCAGATGATCGTCCCACTGCGGCTCAACTCTTAGACCACAAATTTGTCCAGAGACCAGAACACACGCTTGTTGAAGAAATTGTGAGAGATATTTCAAGAAAATTGAATTTGAATCACTCTTTCGTAAGCGATTATCAAGGAATGATTGGAATTGACAAGCATATTGAACAAATCCAATCCATGTTGCACCTTGAGTCAGAGTCCGTTCGAATGGTAGGAATTTGGGGTATGGGAGGCATAGGAAAAACAACAATTGCTACAGCAATATATGACAAACTGGCAAATCAATTCAGTTCCGGCAGCATCGTCCTAAACGTTCAACAAGAAATAGAGAGATTTGGACTAAACCATATACGACGCAAATATATATCAGAGCTTCTAGGAGAAAACCACACACCCTCTAGATTAAGTCATCAAAGGCTCAAAAGGACAAAGGTTCTCCTCGTTCTTGATGATGTGACCAATTCTGATCAACTTAATGATTTAATTGGAAGGTGTAGTAGTTTTGGGGAGGGCAGTAGAATCATTGTGACTACTAGAGACAAGCAGGTACTGAAAAATGTCGATGCTGATGGAATACATGTCGATGCTGATGGAATACATGAAGTCAAGGGGATGAATTTTCAAGAATCGCTGCGTCTTTTTTGTTTAAAGGCCTTTAAACAAAGCAATCCCATAGAAGATTATGCAGGCTTCACAGAGAAGATATTAAATTATGCTGAAGGGGTTCCATTAGCTCTCAAAGTTTTAGGCTCTTCTCTTTATGGTAGAACAAAGGAAGGGACGGATGCAATCCAATGTATATTCCTGAACATGTGCGAGATAGAAAAGGTTCAATTACATCCTGAAACATTCAAAAAGATGGATAATCTTAGAATGATACAGTTCTATAAGCCGTATGGCTTTTCGAAAGACTCAAATGTGATTCTTCCTAAATTTCTTAAAAATCTTCCGGATGATTTAAAGTTTCTTCGTTGGGATAGCTTCCCTCAAAAATCACTGCCACTGGAATTTTGCCCCAAAAATCTAGTTAAACTTGATATGCCTCATAGCCATCTTGAACAACTATGGGAGGGAGAACAGGCAGACCTCGATGTGTTGCCATTGTTTGTAACGAAAGCAAATTCTTCTTCCCTATTATCAGTTAATATTCCAGTTGGTTCTATCATCTTATTAGACAGTCTTGACAAGTTTTCAGTCAGTGTTCAAGGAATTACTAGAAGACCCCGAGGACGTTGTGCAAGACCGCATTCCGAGATCAAATTAGTAGACGAACCAAGACGTTTCTTGGATCCTTTTGATCCCCTGGATTATGCTGAGTCAAACAAAGAACCAAAGGATAATATACAATTACTATGCTTTGAAGAGTTGAGAGAAGGTTCACCCTCATTATTTCCAAGTCTCAACGAGCTTTGCTGGTTGGATCTCTCTCATTGTCAATCACTCAAACGCCTTCCAATTGACCTTTTCAAATTGAAATTTCTCAAAAGACTTTTCCTCCGTGGTTGCTCGAATTTGGAGGCGTTCCCAGAAATTGAGGAAATGTCGGGAAATTTATCGGTGCTCATCTTAGACGAAACAGCAATAATTGAACTGCCGTCGTCCTTACACCATTTGGTCGGGCTAGAAGAGTTGAGCTTGCACAATTGCTCAAGACTTGAGATTATTCCATCTTCCATTGGAAGTCTCAGCAAACTCAACAAGTTAAGCATTACCTACTGTGAATCGCTTGATACTTTTCCAAGCAGTATTTTCAAATTGAAGCTGACAAAACTTGATTTGCATGGTTGCTTAATGTTGAAGACCTTTCCAGAGATCTTAGAGCCTGCAGGAAATTTCGTTCACATTAACTTAACAAAAACAGCAATTAAGGAACTGCCGTCATCTTTGGAAAATTTGGTTGGACTTCAAACCTTGTGCCTGAAGTTGGAACTTCCATTAGTTTCTGACAAGGATACCTTCAAATTTCATTTCACCAATAGTCAAGAACTGGATGAAACTGCTTGCAGTAATTTTGGGGATGAAGCACAGCTTAGGATCACCCAGGATGCATATAAGTCTGTGTTCTTTTGTTTTCCTGGGAGTGCAATTCCTGGTTGGTTTCCTTATCGTTGTAAGGGACACTTAGTAACAATGAAAAAAGATTCTCTAGATTCGCCACGTAATAATAAGCTTGTTGGTTTTGCTCTGTCTGTCGTTTTGGGTGGTGTAGATTTGGATGATGCAAAAGTAAGTAATAAAAGCTTTACATACAGATTAACATTTGAATCTGATGGTTGCAGACACCATCTTCCTATTCTTATCGATGACAATAGTTACTATTTCTATTGGAAGGGTCGAAATAGGTTATTCATCCAAGATCACACATTCATATGGAAATATCCATTGCACTTTGGAAGCATTGACAACAGCCTCTTTGATGTCCAAAAATTTACTTTTGAGTTCATCAAATGTGATTTTATCCCATATGTTAACTCAGATGTCATGGTGAAAGAGTGTGGAATATGCCCTCTTTATACAACAGAAAAGGATGACAATTGTGGTTATTCCATGGGTTCATTTACAACAAGATATCCAACTTACCATAAGACAAGGGATATTAAATGTGCAAATATATTGGTTGATGCAAATGGATCTGTCAAAGTTGCGGATTTTGGATTGGCAAAGGTAACTATACTGAATGATGTTAAATCATCCCAGGGAACAGCATTCTGGATGGCACCTGAGGTTGTAAGAGGAGAAGTTAAAGGTTATGGACTTCCGGTTGATATATGGAGTCTAGGATGCACTGTGTTGGAGATGTTAACTGGACAAGTTCCATACTTTCCTATAGAATGTATCAGCGCAATGTTTAGAATTGGAAAAGGTGAACTACCTCCAATGCCTGATTCTCTTTCAAGAGATGCCCGTAATTTCATCATGCAGTGTCTTAAAGTTAATCCAGATTATCGTCCCACTGCGGCTCAACTCTTAGACCACAAATTTGTCCAGAGACCAGAACACACGCTTGTTGAAGAAATTGTGAGAGATATTTCAAGAAAATTGAATTTGAATCACTCTTTCGTAAGCGATTATCAAGGAATGATTGGAATTGACAAGCATATTGAACAAATCCAATCCATGTTGCACCTTGAGTCAGAGTCCGTTCGAATGGTAGGAATTTGGGGTATGGGAGGCATAGGAAAAACAACAATTGCTACAGCAATATATGACAAACTGGCAAATCAATTCAGTTCCGGCAGCATCGTCCTAAACGTTCAACAAGAAATAGAGAGATTTGGACTAAACCATATACGAAGCAAATATATATCAGAGCTTCTAGGAGAAAACCACACACCCTCTAGATTAAGTCATCAAAGGCTCAAAAGGACAAAGGTTCTCCTCGTTCTTGATGATGTGACCAATTCTGATCAACTTAATGATTTAATTGGAAGGTGTAGTAGTTTTGGGGAGGGCAGTAGAATCATTGTGACTACTAGAGACAAGCAGGTACTGAAAAATGTCGATGCTGATGGAATACATGTCGATGCTGATGGAATACATGAAGTCAAGGGGATGAATTTTCAAGAATCGCTGCGTCTTTTTTGTTTAAAGGCCTTTAAACAAAACAATCCCATAGAAGATTATGCAGGCTTCACAGAGAAGATATTAAATTATGCTGAAGGGGTTCCATTAGCTCTCAAAGTTTTAGGCTCTTCTCTTTATGGTAGAACAAAGGAAGGGACGGATGCAATCCAATGTATATTCCTGAACATGTGCGAGATAGAAAAGGTTCAATTACATCCTGAAACATTCAAAAAGATGGATAATCTTAGAATGATACAGTTCTATAAGCCGTATGGCTTTTCGAAAGACTCAAATGTGATTCTTCCTAAATTTCTTAAAAATCTTTCGGATGATTTAAAGTTTCTTCGTTGGGATAGCTTCCCTCAAAAATCACTGCCACTGGAATTTTGCCCCAAAAATCTAGTTAAACTTGATATGCCTCATAGCCATCTTGAACAACTATGGGAGGGAGAACAGGCAGACCTCGATGTGTTGCCATTGTTTTTAACGAAAGCAAATTCTTCTTCCCTATTATCAGTTAATATTCCAGTTGGTTCTATCATCTTATTAGACAGTCTTGACAAGTTTTCAGTCAGTGTTCAAGGAATTACTAGAAGACCCCGAGGACGTTGTGCAAGACCGCATTCCGAGATCAAATTAGTAGACGAACCAAGACGTTTCTTGGATCCTTTTGATCCCCTGGATTATGCTGAGTCAAACAAAGAACCAAAGGATAATATACAATTACTATGCTTTGAAGAGTTGAGAGAAGGTTCACCCTCATTATTTCCAAGTCTCAACGAGCTTTGCTGGTTGGATCTCTCTCATTGTCAATCACTCAAACGCCTTCCAATTGACCTTTTCAAATTGAAATTTCTCAAAAGACTTTTCCTCCGTGGTTGCTCGAATTTGGAGGCGTTCCCAGAAATTGAGGAAATGTCGGGAAATTTATCGGTGCTCATCTTAGACGAAACAGCAATAATTGAACTGCCGTCGTCCTTACACCATTTGGTCGGGCTAGAAGAGTTGAGCTTGCACAATTGCTCAAGACTTGAGATTATTCCATCTTCCATTGGAAGTCTCAGCAAACTCAACAAGTTAAGCATTACCTACTGTGAATCGCTTGATACTTTTCCAAGCAGTATTTTCAAATTGAAGCTGACAAAACTTGATTTGCATGGTTGCTTAATGTTGAAGACCTTTCCAGAGATCTTAGAGCCTGCAGGAAATTTTGTTCACATTAACTTAACAAAAACAGCAATTAAGGAACTGCCGTCATCTTTGGAAAATTTGGTTGGACTTCAAACCTTGTGCCTGAAGTTGGAACTTCCATTAGTTTCTGACAAGGATACCTTCAAATTTCATTTCACCAATAGTCAAGAACTGGATGAAACTGCTTGCAGTAATTTTGGGGATGAAGCACAGCTTAGGATCACCCAGGATGCATATAAGTCTGTGTTCTTTTGTTTTCCTGGGAGTGCAATTCCTGGTTGGTTTCCTTATCGTTGTAAGGGACACTTAGTAACAATGAAAAAAGATTCTCTAGATTCGCCACGTAATAATAAGCTTGTTGGTTTTGCTCTGTCTGTCGTTTTGGGTGGTGTAGATTTGGATGATGCAAAAGTAAGTAATAAAAGCTTTACATACAGATTAACATTTGAATCTGATGGTTGCAGACACCATCTTCCTATTCTTATCGATGACAATAGTTACTATTTCTATTGGAAGGGTCGAAATAGATTATTCATCCAAGATCACACATTCATATGGAAATATCCATTGCACTTTGGAAGCATTGACAACAGCCTCTTTGATGTCCAAAAATTTACTTTTGAGTTCATCAAATGTGATTTTATCCCATATGTTAACTCAGATGTCATGGTGAAAGAGTGTGGAATATGCCCTCTTTATACAACAGAAAAGGATGACAATTGTGGTTATTCCATATGGGTTCATTTACAACAAGATATCCAACTTACCATAAGACAAGGCCCTGATTGGCGAGCTTGTCTGCACTTCATGAAGAATGCCGTGATTTATAAATGTTGTAGGCCTGATGTGGTTTCAGTATCAGAAATTCTAATGGGTACAGTTTTATTTCTTTTTGATTTATGGGATATTAAATGTGCAAATATATTGGTTGATGCAAATGGATCTGTCAAAGTTGCGGATTTTGGATTGGCAAAGGTAACTATACTGAATGATGTTAAATCATCCCAGGGAACAGCATTCTGGATGGCACCTGAGGTTGTAAGAGGAGAAGTTAAAGGTTATGGACTTCCGGTTGATATATGGAGTCTAGGATGCACTGTGTTGGAGATGTTAACTGGACAAGTTCCATACTTTCCTATAGAATGTATCAGCGCAATGTTTAGAATTGGAAAAGGTGAACTACCTCCAATGCCTGATTCTCTTTCAAGAGATGCCCGTAATTTCATCATGCAGTGTCTTAAAGTTAATCCAGATTATCGTCCCACTGCGGCTCAACTCTTAGACCACAAATTTGTCCAGAGGCTTGAATGTATCCCACAACTTCCGCCATCTCTAAACCAGCTGTTGGCGTGTGATTGTCCAGCCATTGGGAGAATGATACCAAATTCAAGGTTGGAACTTCCATCAGTTTCTGACCATACCTTCAAATTTCATTTCACCAATAGTCAAGAACTGGATGAAACTGCTTGCAGTAATTTTGGGGATGAAGCACAGCTTAGGATCACCCAGGATGCATATAAGTCTGTGTTCTTTTGTTTTCCTGGGAGTGCAATTCCTGGTTGGTTTCCTTATCGTTGTAAGGGACACTTAGTAACAATGAAAAAAGATTCTCTAGATTCGCCACGTAATAATAAGCTTGTTGGTTTTGCTCTGTCTGTCGTTTTGGGTGGTGTAGATTTGGATGATGCAAAAGTTATTCCATGGGTTCGTTTACAACAAGATATCCAACTTACCATAAGACAAGGCAACTGTCTTTTTCGAAGTTTAGGCCCTGATTGGCGAACTTGTCTGCACTTCATGAAGAATGCCGTGATTTATAAATGTTGTAGGCCTGATGTGGTTAGTGTTAATTGTGGTTTGACAGTTTCTAATTGGAAGTCCATTTTAATTTTGTAA

Protein sequence

>Msa0849810

MNSKKKKQPKLQRRNAVKNFNYDAQPSSSSPESSESASSSASILCTRSMDFHDRKSFRVEGVDGEFDIICRSLGLNGPEDFSIPAAAWEAMKFRSSSDVLPRLNVSEFDETKTSGEIDQVGVVDCDDRVLVRDSPAESSGGEVNVSIRDSPVESSGGEVNVSIRDSPVESSGGEVNVSIRDSPAESSGCCTGGEIKVPVRGFDETSGCSTGSGGIKGNRPPMLKPPPGVRVSVVDDTCSTWDILRDFAPEGEGKEREEEEEEEEKVDEVEEKEEVGELELKVEEEENGDIIGEFSRDGFFFAVKQVSLLDQGSQGKQSVVQLEHEIALLSQFEHENIVRYIGTEMDESNLYIFIEFVTKGSLLSLYRRYKLRDSQVSAYTRQILHGLKYLHDRNIVHRDIKCANILVDANGSVKVADFGLAKAIKLNDVKSCQGTAFWMAPEVVRGKVKGYGLPADIWSLGCTVLEMLTGKIPYSPMECISAMFRIGKGELPPVPDTLSRDARDFILQCLKVNPDDRPTAAQLLDHKFVQRPEHTLVEEIVRDISRKLNLNHSFVSDYQGMIGIDKHIEQIQSMLHLESESVRMVGIWGMGGIGKTTIATAIYDKLANQFSSGSIVLNVQQEIERFGLNHIRRKYISELLGENHTPSRLSHQRLKRTKVLLVLDDVTNSDQLNDLIGRCSSFGEGSRIIVTTRDKQVLKNVDADGIHVDADGIHEVKGMNFQESLRLFCLKAFKQSNPIEDYAGFTEKILNYAEGVPLALKVLGSSLYGRTKEGTDAIQCIFLNMCEIEKVQLHPETFKKMDNLRMIQFYKPYGFSKDSNVILPKFLKNLPDDLKFLRWDSFPQKSLPLEFCPKNLVKLDMPHSHLEQLWEGEQADLDVLPLFVTKANSSSLLSVNIPVGSIILLDSLDKFSVSVQGITRRPRGRCARPHSEIKLVDEPRRFLDPFDPLDYAESNKEPKDNIQLLCFEELREGSPSLFPSLNELCWLDLSHCQSLKRLPIDLFKLKFLKRLFLRGCSNLEAFPEIEEMSGNLSVLILDETAIIELPSSLHHLVGLEELSLHNCSRLEIIPSSIGSLSKLNKLSITYCESLDTFPSSIFKLKLTKLDLHGCLMLKTFPEILEPAGNFVHINLTKTAIKELPSSLENLVGLQTLCLKLELPLVSDKDTFKFHFTNSQELDETACSNFGDEAQLRITQDAYKSVFFCFPGSAIPGWFPYRCKGHLVTMKKDSLDSPRNNKLVGFALSVVLGGVDLDDAKVSNKSFTYRLTFESDGCRHHLPILIDDNSYYFYWKGRNRLFIQDHTFIWKYPLHFGSIDNSLFDVQKFTFEFIKCDFIPYVNSDVMVKECGICPLYTTEKDDNCGYSMGSFTTRYPTYHKTRDIKCANILVDANGSVKVADFGLAKVTILNDVKSSQGTAFWMAPEVVRGEVKGYGLPVDIWSLGCTVLEMLTGQVPYFPIECISAMFRIGKGELPPMPDSLSRDARNFIMQCLKVNPDYRPTAAQLLDHKFVQRPEHTLVEEIVRDISRKLNLNHSFVSDYQGMIGIDKHIEQIQSMLHLESESVRMVGIWGMGGIGKTTIATAIYDKLANQFSSGSIVLNVQQEIERFGLNHIRSKYISELLGENHTPSRLSHQRLKRTKVLLVLDDVTNSDQLNDLIGRCSSFGEGSRIIVTTRDKQVLKNVDADGIHVDADGIHEVKGMNFQESLRLFCLKAFKQNNPIEDYAGFTEKILNYAEGVPLALKVLGSSLYGRTKEGTDAIQCIFLNMCEIEKVQLHPETFKKMDNLRMIQFYKPYGFSKDSNVILPKFLKNLSDDLKFLRWDSFPQKSLPLEFCPKNLVKLDMPHSHLEQLWEGEQADLDVLPLFLTKANSSSLLSVNIPVGSIILLDSLDKFSVSVQGITRRPRGRCARPHSEIKLVDEPRRFLDPFDPLDYAESNKEPKDNIQLLCFEELREGSPSLFPSLNELCWLDLSHCQSLKRLPIDLFKLKFLKRLFLRGCSNLEAFPEIEEMSGNLSVLILDETAIIELPSSLHHLVGLEELSLHNCSRLEIIPSSIGSLSKLNKLSITYCESLDTFPSSIFKLKLTKLDLHGCLMLKTFPEILEPAGNFVHINLTKTAIKELPSSLENLVGLQTLCLKLELPLVSDKDTFKFHFTNSQELDETACSNFGDEAQLRITQDAYKSVFFCFPGSAIPGWFPYRCKGHLVTMKKDSLDSPRNNKLVGFALSVVLGGVDLDDAKVSNKSFTYRLTFESDGCRHHLPILIDDNSYYFYWKGRNRLFIQDHTFIWKYPLHFGSIDNSLFDVQKFTFEFIKCDFIPYVNSDVMVKECGICPLYTTEKDDNCGYSIWVHLQQDIQLTIRQGPDWRACLHFMKNAVIYKCCRPDVVSVSEILMGTVLFLFDLWDIKCANILVDANGSVKVADFGLAKVTILNDVKSSQGTAFWMAPEVVRGEVKGYGLPVDIWSLGCTVLEMLTGQVPYFPIECISAMFRIGKGELPPMPDSLSRDARNFIMQCLKVNPDYRPTAAQLLDHKFVQRLECIPQLPPSLNQLLACDCPAIGRMIPNSRLELPSVSDHTFKFHFTNSQELDETACSNFGDEAQLRITQDAYKSVFFCFPGSAIPGWFPYRCKGHLVTMKKDSLDSPRNNKLVGFALSVVLGGVDLDDAKVIPWVRLQQDIQLTIRQGNCLFRSLGPDWRTCLHFMKNAVIYKCCRPDVVSVNCGLTVSNWKSILIL*