Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679810 | XP_013455783.2 | 91.882 | 271 | 22 | 0 | 1 | 271 | 1 | 271 | 1.18e-180 | 507 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679810 | sp|Q94KL7|SILD_FORIN | 58.303 | 271 | 109 | 1 | 2 | 268 | 3 | 273 | 4.24e-105 | 309 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679810 | A0A396I496 | 91.882 | 271 | 22 | 0 | 1 | 271 | 1 | 271 | 0.0 | 507 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007470 | Msa0679810 | 0.806182 | 9.314758e-50 | -8.615850e-47 |
| Msa0008220 | Msa0679810 | 0.801596 | 8.357283e-49 | -8.615850e-47 |
| Msa0015460 | Msa0679810 | 0.806722 | 7.167078e-50 | -8.615850e-47 |
| Msa0017320 | Msa0679810 | 0.832992 | 6.885564e-56 | -8.615850e-47 |
| Msa0043730 | Msa0679810 | 0.823832 | 1.119911e-53 | -8.615850e-47 |
| Msa0056060 | Msa0679810 | 0.801218 | 9.986873e-49 | -8.615850e-47 |
| Msa0065650 | Msa0679810 | 0.820121 | 8.109909e-53 | -8.615850e-47 |
| Msa0072170 | Msa0679810 | 0.800301 | 1.536923e-48 | -8.615850e-47 |
| Msa0090390 | Msa0679810 | 0.815663 | 8.237985e-52 | -8.615850e-47 |
| Msa0109590 | Msa0679810 | 0.806683 | 7.303568e-50 | -8.615850e-47 |
| Msa0111080 | Msa0679810 | 0.807764 | 4.309830e-50 | -8.615850e-47 |
| Msa0626850 | Msa0679810 | 0.801738 | 7.813789e-49 | -8.615850e-47 |
| Msa0626990 | Msa0679810 | 0.805785 | 1.128757e-49 | -8.615850e-47 |
| Msa0627350 | Msa0679810 | 0.807593 | 4.684831e-50 | -8.615850e-47 |
| Msa0630950 | Msa0679810 | 0.810770 | 9.770746e-51 | -8.615850e-47 |
| Msa0641320 | Msa0679810 | 0.823317 | 1.478448e-53 | -8.615850e-47 |
| Msa0641340 | Msa0679810 | 0.828623 | 8.109973e-55 | -8.615850e-47 |
| Msa0643320 | Msa0679810 | 0.806121 | 9.593018e-50 | -8.615850e-47 |
| Msa0654620 | Msa0679810 | 0.819248 | 1.283173e-52 | -8.615850e-47 |
| Msa0679550 | Msa0679810 | 0.828129 | 1.067017e-54 | -8.615850e-47 |
| Msa0679810 | Msa0683140 | 0.809534 | 1.804652e-50 | -8.615850e-47 |
| Msa0679810 | Msa0689780 | 0.825101 | 5.632201e-54 | -8.615850e-47 |
| Msa0679810 | Msa0705990 | 0.810072 | 1.382329e-50 | -8.615850e-47 |
| Msa0679810 | Msa0715410 | 0.824941 | 6.145204e-54 | -8.615850e-47 |
| Msa0679810 | Msa0720370 | 0.805557 | 1.260499e-49 | -8.615850e-47 |
| Msa0679810 | Msa0721340 | 0.823477 | 1.356284e-53 | -8.615850e-47 |
| Msa0679810 | Msa0729970 | 0.807910 | 4.013201e-50 | -8.615850e-47 |
| Msa0679810 | Msa0731180 | 0.812125 | 4.961973e-51 | -8.615850e-47 |
| Msa0679810 | Msa0742150 | 0.853546 | 2.224514e-61 | -8.615850e-47 |
| Msa0679810 | Msa0750850 | 0.802464 | 5.541554e-49 | -8.615850e-47 |
| Msa0679810 | Msa0764920 | 0.807298 | 5.412994e-50 | -8.615850e-47 |
| Msa0679810 | Msa0775560 | 0.834755 | 2.494690e-56 | -8.615850e-47 |
| Msa0679810 | Msa0786070 | 0.843069 | 1.757027e-58 | -8.615850e-47 |
| Msa0679810 | Msa0805920 | 0.840686 | 7.486307e-58 | -8.615850e-47 |
| Msa0679810 | Msa0809140 | 0.836335 | 9.938070e-57 | -8.615850e-47 |
| Msa0679810 | Msa0812950 | 0.824597 | 7.403664e-54 | -8.615850e-47 |
| Msa0679810 | Msa0823440 | 0.817749 | 2.805330e-52 | -8.615850e-47 |
| Msa0679810 | Msa0844110 | 0.802692 | 4.972901e-49 | -8.615850e-47 |
| Msa0679810 | Msa0849160 | 0.803504 | 3.377590e-49 | -8.615850e-47 |
| Msa0679810 | Msa0853440 | 0.809379 | 1.948605e-50 | -8.615850e-47 |
| Msa0679810 | Msa0861470 | 0.821720 | 3.475653e-53 | -8.615850e-47 |
| Msa0679810 | Msa0861570 | 0.809646 | 1.707293e-50 | -8.615850e-47 |
| Msa0679810 | Msa0862280 | 0.804879 | 1.747212e-49 | -8.615850e-47 |
| Msa0679810 | Msa0882400 | 0.803716 | 3.052217e-49 | -8.615850e-47 |
| Msa0679810 | Msa0925840 | 0.820792 | 5.686575e-53 | -8.615850e-47 |
| Msa0679810 | Msa0932100 | 0.808591 | 2.873120e-50 | -8.615850e-47 |
| Msa0679810 | Msa0945100 | 0.803218 | 3.871332e-49 | -8.615850e-47 |
| Msa0679810 | Msa0945120 | 0.815376 | 9.544636e-52 | -8.615850e-47 |
| Msa0679810 | Msa0970230 | 0.808238 | 3.416537e-50 | -8.615850e-47 |
| Msa0679810 | Msa0970480 | 0.802665 | 5.037754e-49 | -8.615850e-47 |
| Msa0679810 | Msa0980020 | 0.835674 | 1.462271e-56 | -8.615850e-47 |
| Msa0679810 | Msa0993240 | 0.815305 | 9.894234e-52 | -8.615850e-47 |
| Msa0679810 | Msa0994370 | 0.821662 | 3.583430e-53 | -8.615850e-47 |
| Msa0679810 | Msa1023300 | 0.805027 | 1.627774e-49 | -8.615850e-47 |
| Msa0679810 | Msa1036910 | 0.828289 | 9.763637e-55 | -8.615850e-47 |
| Msa0679810 | Msa1042660 | 0.813379 | 2.637616e-51 | -8.615850e-47 |
| Msa0679810 | Msa1062030 | 0.811091 | 8.325373e-51 | -8.615850e-47 |
| Msa0679810 | Msa1071320 | 0.808986 | 2.365293e-50 | -8.615850e-47 |
| Msa0679810 | Msa1077340 | 0.812566 | 3.974837e-51 | -8.615850e-47 |
| Msa0679810 | Msa1088290 | 0.800303 | 1.535109e-48 | -8.615850e-47 |
| Msa0679810 | Msa1107190 | 0.836776 | 7.673567e-57 | -8.615850e-47 |
| Msa0679810 | Msa1115280 | 0.819466 | 1.144349e-52 | -8.615850e-47 |
| Msa0679810 | Msa1150790 | 0.834547 | 2.813749e-56 | -8.615850e-47 |
| Msa0679810 | Msa1150800 | 0.803883 | 2.818932e-49 | -8.615850e-47 |
| Msa0679810 | Msa1150810 | 0.821283 | 4.383367e-53 | -8.615850e-47 |
| Msa0679810 | Msa1164020 | 0.846865 | 1.660499e-59 | -8.615850e-47 |
| Msa0679810 | Msa1172130 | -0.808014 | 3.812392e-50 | -8.615850e-47 |
| Msa0679810 | Msa1174310 | 0.805937 | 1.048694e-49 | -8.615850e-47 |
| Msa0679810 | Msa1177780 | 0.802206 | 6.263457e-49 | -8.615850e-47 |
| Msa0679810 | Msa1200250 | 0.804450 | 2.147494e-49 | -8.615850e-47 |
| Msa0679810 | Msa1224200 | 0.823054 | 1.702942e-53 | -8.615850e-47 |
| Msa0679810 | Msa1225100 | 0.810469 | 1.135046e-50 | -8.615850e-47 |
| Msa0679810 | Msa1229610 | 0.851923 | 6.468124e-61 | -8.615850e-47 |
| Msa0679810 | Msa1246700 | 0.807336 | 5.313879e-50 | -8.615850e-47 |
| Msa0679810 | Msa1250110 | 0.808515 | 2.981780e-50 | -8.615850e-47 |
| Msa0679810 | Msa1250730 | 0.805152 | 1.532062e-49 | -8.615850e-47 |
| Msa0679810 | Msa1258370 | 0.809079 | 2.259044e-50 | -8.615850e-47 |
| Msa0679810 | Msa1259530 | 0.816518 | 5.306501e-52 | -8.615850e-47 |
| Msa0679810 | Msa1270660 | 0.809191 | 2.138004e-50 | -8.615850e-47 |
| Msa0679810 | Msa1270730 | 0.807811 | 4.211354e-50 | -8.615850e-47 |
| Msa0679810 | Msa1272320 | 0.847509 | 1.105870e-59 | -8.615850e-47 |
| Msa0679810 | Msa1276340 | 0.823394 | 1.417999e-53 | -8.615850e-47 |
| Msa0679810 | Msa1279480 | 0.805386 | 1.368774e-49 | -8.615850e-47 |
| Msa0679810 | Msa1310220 | 0.824936 | 6.160807e-54 | -8.615850e-47 |
| Msa0679810 | Msa1314770 | 0.815542 | 8.766161e-52 | -8.615850e-47 |
| Msa0679810 | Msa1329870 | 0.814074 | 1.853882e-51 | -8.615850e-47 |
| Msa0679810 | Msa1332050 | 0.800765 | 1.236257e-48 | -8.615850e-47 |
| Msa0679810 | Msa1355890 | 0.840459 | 8.587539e-58 | -8.615850e-47 |
| Msa0679810 | Msa1405220 | 0.816088 | 6.621093e-52 | -8.615850e-47 |
| Msa0679810 | Msa1420270 | 0.826025 | 3.401033e-54 | -8.615850e-47 |
| Msa0679810 | Msa1421210 | 0.807849 | 4.134431e-50 | -8.615850e-47 |
| Msa0679810 | Msa1428780 | 0.804486 | 2.110851e-49 | -8.615850e-47 |
| Msa0679810 | Msa1443610 | 0.814003 | 1.921672e-51 | -8.615850e-47 |
| Msa0679810 | Msa1457160 | 0.843337 | 1.491317e-58 | -8.615850e-47 |
| Msa0679810 | Msa1463600 | 0.827382 | 1.613714e-54 | -8.615850e-47 |
| Msa0126880 | Msa0679810 | 0.802194 | 6.297195e-49 | -8.615850e-47 |
| Msa0130520 | Msa0679810 | 0.831324 | 1.780403e-55 | -8.615850e-47 |
| Msa0137870 | Msa0679810 | 0.803778 | 2.963196e-49 | -8.615850e-47 |
| Msa0138020 | Msa0679810 | 0.804281 | 2.329693e-49 | -8.615850e-47 |
| Msa0142280 | Msa0679810 | 0.828464 | 8.862616e-55 | -8.615850e-47 |
| Msa0142500 | Msa0679810 | 0.819811 | 9.548472e-53 | -8.615850e-47 |
| Msa0152560 | Msa0679810 | 0.807391 | 5.171548e-50 | -8.615850e-47 |
| Msa0154920 | Msa0679810 | 0.800361 | 1.493967e-48 | -8.615850e-47 |
| Msa0155340 | Msa0679810 | 0.809470 | 1.862301e-50 | -8.615850e-47 |
| Msa0171980 | Msa0679810 | 0.805030 | 1.625033e-49 | -8.615850e-47 |
| Msa0187490 | Msa0679810 | 0.816776 | 4.644360e-52 | -8.615850e-47 |
| Msa0187830 | Msa0679810 | 0.814743 | 1.318829e-51 | -8.615850e-47 |
| Msa0189610 | Msa0679810 | 0.800929 | 1.144098e-48 | -8.615850e-47 |
| Msa0202930 | Msa0679810 | 0.811920 | 5.499947e-51 | -8.615850e-47 |
| Msa0220080 | Msa0679810 | 0.812066 | 5.111708e-51 | -8.615850e-47 |
| Msa0223920 | Msa0679810 | 0.812251 | 4.657148e-51 | -8.615850e-47 |
| Msa0225470 | Msa0679810 | 0.811397 | 7.145708e-51 | -8.615850e-47 |
| Msa0236070 | Msa0679810 | 0.800788 | 1.222790e-48 | -8.615850e-47 |
| Msa0436190 | Msa0679810 | 0.810458 | 1.140979e-50 | -8.615850e-47 |
| Msa0482180 | Msa0679810 | 0.819355 | 1.213082e-52 | -8.615850e-47 |
| Msa0244140 | Msa0679810 | 0.823667 | 1.224426e-53 | -8.615850e-47 |
| Msa0244190 | Msa0679810 | 0.824124 | 9.564263e-54 | -8.615850e-47 |
| Msa0265160 | Msa0679810 | 0.832292 | 1.027516e-55 | -8.615850e-47 |
| Msa0284450 | Msa0679810 | 0.815175 | 1.057625e-51 | -8.615850e-47 |
| Msa0299660 | Msa0679810 | 0.822391 | 2.428952e-53 | -8.615850e-47 |
| Msa0319290 | Msa0679810 | 0.800185 | 1.622692e-48 | -8.615850e-47 |
| Msa0340690 | Msa0679810 | 0.819722 | 1.000214e-52 | -8.615850e-47 |
| Msa0340710 | Msa0679810 | 0.813198 | 2.890037e-51 | -8.615850e-47 |
| Msa0485490 | Msa0679810 | 0.809563 | 1.778979e-50 | -8.615850e-47 |
| Msa0534410 | Msa0679810 | 0.821024 | 5.029008e-53 | -8.615850e-47 |
| Msa0537770 | Msa0679810 | 0.807833 | 4.166344e-50 | -8.615850e-47 |
| Msa0545290 | Msa0679810 | 0.998616 | 1.328723e-270 | -8.615850e-47 |
| Msa0573580 | Msa0679810 | 0.808060 | 3.728584e-50 | -8.615850e-47 |
| Msa0582280 | Msa0679810 | 0.810656 | 1.034060e-50 | -8.615850e-47 |
| Msa0587190 | Msa0679810 | 0.815480 | 9.047665e-52 | -8.615850e-47 |
| Msa0594200 | Msa0679810 | 0.807598 | 4.674720e-50 | -8.615850e-47 |
| Msa0597000 | Msa0679810 | 0.804064 | 2.584294e-49 | -8.615850e-47 |
| Msa0600890 | Msa0679810 | 0.997504 | 1.018930e-243 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679810 | MtrunA17_Chr4g0025971 | 91.882 | 271 | 22 | 0 | 1 | 271 | 1 | 271 | 0.0 | 507 |
| Msa0679810 | MtrunA17_Chr4g0026001 | 84.133 | 271 | 43 | 0 | 1 | 271 | 1 | 271 | 1.60e-172 | 477 |
| Msa0679810 | MtrunA17_Chr4g0025981 | 82.143 | 252 | 45 | 0 | 15 | 266 | 42 | 293 | 1.27e-152 | 429 |
| Msa0679810 | MtrunA17_Chr4g0044111 | 60.305 | 262 | 101 | 1 | 12 | 270 | 11 | 272 | 5.60e-107 | 311 |
| Msa0679810 | MtrunA17_Chr7g0266981 | 60.305 | 262 | 101 | 1 | 12 | 270 | 11 | 272 | 1.06e-106 | 310 |
| Msa0679810 | MtrunA17_Chr7g0266891 | 58.462 | 260 | 105 | 1 | 14 | 270 | 7 | 266 | 3.53e-101 | 296 |
| Msa0679810 | MtrunA17_Chr4g0044131 | 55.731 | 253 | 109 | 1 | 12 | 261 | 6 | 258 | 3.16e-89 | 266 |
| Msa0679810 | MtrunA17_Chr7g0244061 | 50.909 | 275 | 108 | 5 | 12 | 262 | 27 | 298 | 9.65e-88 | 263 |
| Msa0679810 | MtrunA17_Chr7g0268591 | 50.746 | 268 | 122 | 4 | 12 | 270 | 31 | 297 | 2.58e-82 | 249 |
| Msa0679810 | MtrunA17_Chr7g0252031 | 50.000 | 270 | 120 | 5 | 12 | 269 | 33 | 299 | 7.19e-79 | 240 |
| Msa0679810 | MtrunA17_Chr2g0324021 | 50.000 | 254 | 122 | 3 | 12 | 261 | 4 | 256 | 1.04e-78 | 239 |
| Msa0679810 | MtrunA17_Chr7g0270441 | 49.035 | 259 | 126 | 3 | 12 | 266 | 4 | 260 | 1.55e-78 | 238 |
| Msa0679810 | MtrunA17_Chr7g0270451 | 48.627 | 255 | 126 | 3 | 12 | 262 | 4 | 257 | 1.67e-76 | 233 |
| Msa0679810 | MtrunA17_Chr6g0459261 | 45.489 | 266 | 139 | 4 | 1 | 261 | 13 | 277 | 4.69e-75 | 230 |
| Msa0679810 | MtrunA17_Chr7g0267011 | 60.326 | 184 | 73 | 0 | 12 | 195 | 6 | 189 | 1.36e-74 | 226 |
| Msa0679810 | MtrunA17_Chr7g0267001 | 50.588 | 255 | 101 | 4 | 12 | 261 | 6 | 240 | 1.47e-74 | 228 |
| Msa0679810 | MtrunA17_Chr7g0266991 | 52.814 | 231 | 89 | 2 | 11 | 238 | 22 | 235 | 7.20e-74 | 226 |
| Msa0679810 | MtrunA17_Chr3g0084871 | 48.496 | 266 | 127 | 2 | 12 | 267 | 14 | 279 | 3.16e-73 | 225 |
| Msa0679810 | MtrunA17_Chr4g0040371 | 46.241 | 266 | 125 | 4 | 10 | 262 | 15 | 275 | 2.33e-71 | 221 |
| Msa0679810 | MtrunA17_Chr6g0459281 | 45.349 | 258 | 136 | 3 | 8 | 260 | 7 | 264 | 2.85e-70 | 217 |
| Msa0679810 | MtrunA17_Chr6g0459331 | 46.008 | 263 | 136 | 4 | 1 | 258 | 1 | 262 | 6.01e-69 | 214 |
| Msa0679810 | MtrunA17_Chr6g0459301 | 43.478 | 253 | 138 | 3 | 13 | 260 | 13 | 265 | 2.57e-68 | 212 |
| Msa0679810 | MtrunA17_Chr6g0459271 | 44.361 | 266 | 142 | 4 | 1 | 261 | 1 | 265 | 8.64e-67 | 208 |
| Msa0679810 | MtrunA17_Chr6g0459351 | 46.032 | 252 | 127 | 5 | 13 | 257 | 12 | 261 | 1.05e-66 | 208 |
| Msa0679810 | MtrunA17_Chr4g0044121 | 56.983 | 179 | 74 | 1 | 95 | 270 | 1 | 179 | 2.79e-63 | 196 |
| Msa0679810 | MtrunA17_Chr6g0463951 | 49.419 | 172 | 82 | 3 | 95 | 262 | 1 | 171 | 7.45e-44 | 147 |
| Msa0679810 | MtrunA17_Chr7g0270471 | 47.973 | 148 | 73 | 2 | 121 | 264 | 1 | 148 | 1.77e-39 | 134 |
| Msa0679810 | MtrunA17_Chr3g0122901 | 30.709 | 254 | 168 | 5 | 8 | 257 | 69 | 318 | 6.35e-34 | 125 |
| Msa0679810 | MtrunA17_Chr4g0028921 | 31.136 | 273 | 176 | 7 | 4 | 267 | 1 | 270 | 1.37e-29 | 112 |
| Msa0679810 | MtrunA17_Chr3g0142651 | 43.182 | 132 | 70 | 1 | 95 | 221 | 1 | 132 | 1.63e-28 | 105 |
| Msa0679810 | MtrunA17_Chr1g0191751 | 33.858 | 254 | 154 | 6 | 13 | 256 | 100 | 349 | 1.85e-28 | 111 |
| Msa0679810 | MtrunA17_Chr4g0028911 | 30.798 | 263 | 170 | 7 | 14 | 267 | 11 | 270 | 2.95e-27 | 106 |
| Msa0679810 | MtrunA17_Chr7g0270461 | 51.020 | 98 | 48 | 0 | 12 | 109 | 44 | 141 | 9.19e-27 | 101 |
| Msa0679810 | MtrunA17_Chr7g0272961 | 30.196 | 255 | 162 | 7 | 13 | 256 | 39 | 288 | 8.61e-26 | 103 |
| Msa0679810 | MtrunA17_Chr4g0074511 | 32.453 | 265 | 158 | 10 | 9 | 259 | 35 | 292 | 3.63e-24 | 98.6 |
| Msa0679810 | MtrunA17_Chr1g0171831 | 30.040 | 253 | 158 | 7 | 11 | 247 | 11 | 260 | 6.08e-23 | 94.7 |
| Msa0679810 | MtrunA17_Chr7g0259521 | 28.986 | 276 | 165 | 10 | 1 | 262 | 1 | 259 | 7.86e-23 | 94.4 |
| Msa0679810 | MtrunA17_Chr0c30g0494101 | 32.331 | 266 | 155 | 11 | 9 | 259 | 35 | 290 | 1.48e-22 | 94.4 |
| Msa0679810 | MtrunA17_Chr3g0112261 | 29.200 | 250 | 170 | 6 | 14 | 259 | 19 | 265 | 2.47e-21 | 90.5 |
| Msa0679810 | MtrunA17_Chr8g0357481 | 31.298 | 262 | 152 | 8 | 14 | 257 | 14 | 265 | 4.51e-21 | 90.5 |
| Msa0679810 | MtrunA17_Chr4g0045041 | 33.202 | 253 | 141 | 8 | 16 | 253 | 6 | 245 | 1.29e-20 | 91.3 |
| Msa0679810 | MtrunA17_Chr3g0112151 | 30.196 | 255 | 169 | 8 | 14 | 264 | 86 | 335 | 4.22e-20 | 88.2 |
| Msa0679810 | MtrunA17_Chr7g0239511 | 29.259 | 270 | 176 | 8 | 1 | 259 | 1 | 266 | 1.51e-19 | 85.5 |
| Msa0679810 | MtrunA17_Chr3g0112271 | 28.137 | 263 | 178 | 6 | 8 | 264 | 9 | 266 | 1.86e-19 | 85.5 |
| Msa0679810 | MtrunA17_Chr4g0075531 | 26.506 | 249 | 175 | 6 | 12 | 257 | 5 | 248 | 6.56e-19 | 83.6 |
| Msa0679810 | MtrunA17_Chr4g0045061 | 30.859 | 256 | 143 | 8 | 16 | 253 | 6 | 245 | 6.62e-19 | 86.3 |
| Msa0679810 | MtrunA17_Chr4g0054341 | 29.670 | 182 | 124 | 3 | 15 | 195 | 3 | 181 | 3.18e-18 | 82.0 |
| Msa0679810 | MtrunA17_Chr3g0112141 | 27.451 | 255 | 176 | 7 | 14 | 264 | 17 | 266 | 8.76e-18 | 80.9 |
| Msa0679810 | MtrunA17_Chr7g0239491 | 27.668 | 253 | 171 | 7 | 14 | 258 | 15 | 263 | 8.89e-18 | 80.9 |
| Msa0679810 | MtrunA17_Chr3g0112171 | 30.000 | 260 | 163 | 12 | 14 | 264 | 15 | 264 | 2.28e-17 | 79.7 |
| Msa0679810 | MtrunA17_Chr7g0239481 | 30.040 | 253 | 164 | 7 | 14 | 257 | 15 | 263 | 5.21e-17 | 78.6 |
| Msa0679810 | MtrunA17_Chr4g0032141 | 29.008 | 262 | 175 | 9 | 8 | 264 | 50 | 305 | 7.19e-17 | 79.0 |
| Msa0679810 | MtrunA17_Chr7g0259531 | 27.165 | 254 | 170 | 6 | 14 | 257 | 11 | 259 | 1.98e-16 | 77.0 |
| Msa0679810 | MtrunA17_Chr8g0386171 | 27.027 | 259 | 144 | 6 | 14 | 235 | 52 | 302 | 3.02e-16 | 77.8 |
| Msa0679810 | MtrunA17_Chr7g0239501 | 28.148 | 270 | 179 | 8 | 1 | 259 | 1 | 266 | 1.11e-15 | 75.1 |
| Msa0679810 | MtrunA17_Chr3g0124471 | 30.556 | 180 | 117 | 4 | 18 | 195 | 30 | 203 | 9.97e-15 | 72.8 |
| Msa0679810 | MtrunA17_Chr4g0032181 | 28.426 | 197 | 126 | 6 | 70 | 259 | 59 | 247 | 1.47e-14 | 71.6 |
| Msa0679810 | MtrunA17_Chr8g0386201 | 28.962 | 183 | 124 | 4 | 16 | 195 | 47 | 226 | 4.05e-14 | 71.2 |
| Msa0679810 | MtrunA17_Chr7g0239451 | 26.482 | 253 | 175 | 5 | 14 | 258 | 16 | 265 | 5.86e-14 | 70.1 |
| Msa0679810 | MtrunA17_Chr3g0124481 | 30.120 | 166 | 109 | 3 | 31 | 195 | 29 | 188 | 6.67e-14 | 70.1 |
| Msa0679810 | MtrunA17_Chr8g0355281 | 27.928 | 222 | 145 | 4 | 20 | 235 | 75 | 287 | 7.24e-13 | 67.8 |
| Msa0679810 | MtrunA17_Chr1g0182511 | 27.306 | 271 | 175 | 8 | 1 | 257 | 1 | 263 | 8.26e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679810 | AT3G51680.1 | 52.190 | 274 | 110 | 6 | 12 | 266 | 30 | 301 | 1.17e-88 | 266 |
| Msa0679810 | AT3G26760.1 | 46.591 | 264 | 129 | 3 | 6 | 258 | 28 | 290 | 1.38e-78 | 240 |
| Msa0679810 | AT2G47140.1 | 48.810 | 252 | 124 | 3 | 12 | 259 | 4 | 254 | 2.87e-77 | 235 |
| Msa0679810 | AT3G26770.1 | 49.219 | 256 | 120 | 3 | 12 | 258 | 39 | 293 | 9.22e-77 | 236 |
| Msa0679810 | AT1G52340.1 | 48.889 | 270 | 123 | 3 | 12 | 267 | 16 | 284 | 1.04e-76 | 234 |
| Msa0679810 | AT4G03140.1 | 52.941 | 255 | 111 | 3 | 12 | 258 | 76 | 329 | 2.68e-75 | 233 |
| Msa0679810 | AT3G29250.2 | 47.222 | 252 | 126 | 4 | 13 | 259 | 5 | 254 | 1.22e-72 | 223 |
| Msa0679810 | AT2G47130.1 | 48.016 | 252 | 123 | 4 | 13 | 259 | 5 | 253 | 2.09e-72 | 223 |
| Msa0679810 | AT3G29250.3 | 47.222 | 252 | 126 | 4 | 13 | 259 | 41 | 290 | 4.66e-72 | 223 |
| Msa0679810 | AT3G29250.1 | 47.059 | 255 | 127 | 5 | 11 | 259 | 40 | 292 | 3.23e-71 | 221 |
| Msa0679810 | AT2G47120.2 | 45.882 | 255 | 131 | 5 | 9 | 259 | 2 | 253 | 1.44e-69 | 216 |
| Msa0679810 | AT2G47120.1 | 46.215 | 251 | 128 | 5 | 13 | 259 | 5 | 252 | 6.39e-69 | 214 |
| Msa0679810 | AT3G29260.1 | 45.455 | 253 | 130 | 4 | 12 | 259 | 4 | 253 | 2.13e-68 | 213 |
| Msa0679810 | AT3G42960.1 | 44.151 | 265 | 131 | 6 | 7 | 258 | 1 | 261 | 4.24e-59 | 189 |
| Msa0679810 | AT3G55290.2 | 33.203 | 256 | 159 | 7 | 14 | 259 | 17 | 270 | 1.46e-31 | 118 |
| Msa0679810 | AT3G55290.1 | 33.203 | 256 | 159 | 7 | 14 | 259 | 18 | 271 | 1.63e-31 | 118 |
| Msa0679810 | AT1G63380.3 | 32.422 | 256 | 162 | 6 | 14 | 259 | 15 | 269 | 1.79e-30 | 115 |
| Msa0679810 | AT1G63380.1 | 32.422 | 256 | 162 | 6 | 14 | 259 | 17 | 271 | 1.94e-30 | 115 |
| Msa0679810 | AT1G63380.2 | 32.422 | 256 | 162 | 6 | 14 | 259 | 22 | 276 | 2.27e-30 | 115 |
| Msa0679810 | AT1G63380.4 | 32.422 | 256 | 162 | 6 | 14 | 259 | 19 | 273 | 2.30e-30 | 115 |
| Msa0679810 | AT2G17845.1 | 31.783 | 258 | 163 | 6 | 14 | 259 | 47 | 303 | 5.00e-30 | 115 |
| Msa0679810 | AT1G62610.2 | 31.250 | 256 | 165 | 6 | 14 | 259 | 13 | 267 | 1.29e-29 | 113 |
| Msa0679810 | AT1G62610.1 | 31.250 | 256 | 165 | 6 | 14 | 259 | 14 | 268 | 1.35e-29 | 113 |
| Msa0679810 | AT1G62610.3 | 31.250 | 256 | 165 | 6 | 14 | 259 | 15 | 269 | 1.41e-29 | 113 |
| Msa0679810 | AT1G62610.4 | 31.250 | 256 | 165 | 6 | 14 | 259 | 19 | 273 | 1.86e-29 | 112 |
| Msa0679810 | AT1G24360.1 | 29.457 | 258 | 164 | 6 | 11 | 259 | 71 | 319 | 2.82e-29 | 113 |
| Msa0679810 | AT3G55310.1 | 32.422 | 256 | 161 | 7 | 14 | 259 | 17 | 270 | 5.77e-29 | 111 |
| Msa0679810 | AT3G46170.1 | 31.890 | 254 | 161 | 7 | 13 | 256 | 25 | 276 | 9.26e-29 | 111 |
| Msa0679810 | AT3G05260.1 | 29.961 | 257 | 165 | 6 | 13 | 259 | 36 | 287 | 3.51e-25 | 101 |
| Msa0679810 | AT1G54870.2 | 31.890 | 254 | 159 | 7 | 13 | 256 | 83 | 332 | 4.25e-25 | 102 |
| Msa0679810 | AT1G54870.1 | 31.890 | 254 | 159 | 7 | 13 | 256 | 81 | 330 | 4.26e-25 | 102 |
| Msa0679810 | AT2G30670.1 | 30.000 | 260 | 175 | 4 | 14 | 270 | 7 | 262 | 2.54e-24 | 99.0 |
| Msa0679810 | AT2G29310.1 | 31.200 | 250 | 165 | 5 | 14 | 259 | 7 | 253 | 4.44e-24 | 98.2 |
| Msa0679810 | AT2G29340.2 | 29.528 | 254 | 172 | 4 | 14 | 264 | 7 | 256 | 8.78e-24 | 97.4 |
| Msa0679810 | AT2G47150.1 | 31.579 | 247 | 117 | 7 | 14 | 259 | 1 | 196 | 1.04e-23 | 95.5 |
| Msa0679810 | AT2G29340.1 | 29.528 | 254 | 172 | 4 | 14 | 264 | 7 | 256 | 1.83e-23 | 97.4 |
| Msa0679810 | AT1G07450.1 | 29.921 | 254 | 170 | 5 | 14 | 264 | 8 | 256 | 2.95e-23 | 95.9 |
| Msa0679810 | AT5G06060.1 | 29.804 | 255 | 170 | 6 | 14 | 264 | 9 | 258 | 4.28e-23 | 95.5 |
| Msa0679810 | AT2G29330.1 | 28.906 | 256 | 171 | 6 | 14 | 264 | 7 | 256 | 3.70e-22 | 92.8 |
| Msa0679810 | AT2G29300.1 | 31.746 | 252 | 162 | 7 | 14 | 259 | 7 | 254 | 5.43e-22 | 92.4 |
| Msa0679810 | AT5G18210.1 | 28.788 | 264 | 170 | 6 | 7 | 257 | 1 | 259 | 6.43e-22 | 92.4 |
| Msa0679810 | AT1G07440.1 | 28.346 | 254 | 174 | 5 | 14 | 264 | 12 | 260 | 1.26e-21 | 91.7 |
| Msa0679810 | AT2G29300.2 | 31.474 | 251 | 162 | 7 | 14 | 258 | 7 | 253 | 2.33e-21 | 91.3 |
| Msa0679810 | AT2G29370.1 | 27.799 | 259 | 170 | 6 | 14 | 264 | 16 | 265 | 3.37e-21 | 90.5 |
| Msa0679810 | AT2G29290.2 | 27.559 | 254 | 177 | 4 | 14 | 264 | 7 | 256 | 6.61e-21 | 89.7 |
| Msa0679810 | AT5G50590.2 | 33.520 | 179 | 108 | 5 | 13 | 185 | 44 | 217 | 1.34e-20 | 88.6 |
| Msa0679810 | AT5G50690.2 | 33.520 | 179 | 108 | 5 | 13 | 185 | 44 | 217 | 1.34e-20 | 88.6 |
| Msa0679810 | AT2G29260.1 | 28.090 | 267 | 183 | 6 | 2 | 264 | 56 | 317 | 1.49e-20 | 89.7 |
| Msa0679810 | AT4G13180.1 | 30.147 | 272 | 168 | 9 | 1 | 259 | 1 | 263 | 2.11e-20 | 88.2 |
| Msa0679810 | AT5G10050.1 | 31.148 | 183 | 118 | 4 | 15 | 195 | 6 | 182 | 3.01e-20 | 88.2 |
| Msa0679810 | AT5G50590.1 | 33.520 | 179 | 108 | 5 | 13 | 185 | 44 | 217 | 5.67e-20 | 87.8 |
| Msa0679810 | AT5G50690.1 | 33.520 | 179 | 108 | 5 | 13 | 185 | 44 | 217 | 5.67e-20 | 87.8 |
| Msa0679810 | AT2G29150.1 | 29.921 | 254 | 170 | 6 | 14 | 264 | 16 | 264 | 7.28e-20 | 87.0 |
| Msa0679810 | AT1G10310.1 | 32.536 | 209 | 135 | 5 | 1 | 207 | 3 | 207 | 1.01e-19 | 85.9 |
| Msa0679810 | AT2G29350.1 | 28.626 | 262 | 179 | 5 | 6 | 264 | 7 | 263 | 1.22e-19 | 86.3 |
| Msa0679810 | AT4G05530.1 | 30.196 | 255 | 158 | 9 | 12 | 257 | 7 | 250 | 1.77e-19 | 85.5 |
| Msa0679810 | AT2G29340.3 | 31.771 | 192 | 126 | 3 | 14 | 202 | 7 | 196 | 4.27e-19 | 83.6 |
| Msa0679810 | AT2G29340.4 | 31.771 | 192 | 126 | 3 | 14 | 202 | 7 | 196 | 4.27e-19 | 83.6 |
| Msa0679810 | AT2G29360.1 | 27.863 | 262 | 166 | 7 | 14 | 264 | 16 | 265 | 5.32e-19 | 84.7 |
| Msa0679810 | AT2G29320.1 | 29.434 | 265 | 165 | 6 | 11 | 264 | 10 | 263 | 9.56e-19 | 84.0 |
| Msa0679810 | AT5G50770.1 | 33.171 | 205 | 130 | 6 | 16 | 216 | 47 | 248 | 2.89e-18 | 83.6 |
| Msa0679810 | AT5G18210.2 | 28.205 | 273 | 173 | 7 | 7 | 266 | 1 | 263 | 2.94e-18 | 82.8 |
| Msa0679810 | AT5G65205.1 | 32.973 | 185 | 112 | 6 | 15 | 195 | 7 | 183 | 3.48e-18 | 82.4 |
| Msa0679810 | AT3G47350.1 | 29.851 | 201 | 125 | 6 | 16 | 208 | 46 | 238 | 6.81e-18 | 82.0 |
| Msa0679810 | AT3G47350.2 | 29.851 | 201 | 125 | 6 | 16 | 208 | 46 | 238 | 6.83e-18 | 82.4 |
| Msa0679810 | AT1G49670.1 | 31.687 | 243 | 142 | 7 | 16 | 244 | 6 | 238 | 8.01e-18 | 83.6 |
| Msa0679810 | AT1G49670.2 | 31.687 | 243 | 142 | 7 | 16 | 244 | 6 | 238 | 8.13e-18 | 83.6 |
| Msa0679810 | AT2G29310.3 | 32.292 | 192 | 125 | 3 | 14 | 202 | 7 | 196 | 3.02e-17 | 78.2 |
| Msa0679810 | AT3G12800.1 | 30.075 | 266 | 155 | 9 | 14 | 259 | 10 | 264 | 4.28e-17 | 79.7 |
| Msa0679810 | AT2G29310.2 | 29.464 | 224 | 151 | 5 | 40 | 259 | 31 | 251 | 1.22e-16 | 77.8 |
| Msa0679810 | AT5G50700.1 | 27.391 | 230 | 150 | 7 | 14 | 235 | 45 | 265 | 1.92e-16 | 78.6 |
| Msa0679810 | AT5G50600.1 | 27.391 | 230 | 150 | 7 | 14 | 235 | 45 | 265 | 1.92e-16 | 78.6 |
| Msa0679810 | AT3G47360.1 | 30.102 | 196 | 121 | 6 | 17 | 204 | 48 | 235 | 6.22e-16 | 76.6 |
| Msa0679810 | AT3G04000.1 | 27.675 | 271 | 179 | 6 | 1 | 256 | 1 | 269 | 8.93e-16 | 75.5 |
| Msa0679810 | AT2G29290.1 | 27.041 | 196 | 138 | 3 | 70 | 264 | 48 | 239 | 4.54e-15 | 73.2 |
| Msa0679810 | AT2G29350.2 | 29.949 | 197 | 133 | 3 | 9 | 202 | 10 | 204 | 5.12e-15 | 72.8 |
| Msa0679810 | AT3G03980.1 | 26.354 | 277 | 176 | 7 | 1 | 257 | 1 | 269 | 2.30e-14 | 71.6 |
| Msa0679810 | AT5G04900.1 | 31.361 | 169 | 111 | 2 | 20 | 183 | 83 | 251 | 2.54e-14 | 72.4 |
| Msa0679810 | AT2G29350.3 | 29.082 | 196 | 133 | 4 | 70 | 264 | 35 | 225 | 4.04e-14 | 70.5 |
| Msa0679810 | AT2G29320.3 | 32.308 | 195 | 124 | 5 | 11 | 200 | 10 | 201 | 5.97e-14 | 69.3 |
Find 90 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCTTGGGGCTTTATTTAA+TGG | 0.186274 | 4_4:-38285138 | Msa0679810:five_prime_UTR |
| ATTCATTCATTATTGGTAAA+TGG | 0.225496 | 4_4:-38285296 | None:intergenic |
| AGCTTGGGCCATTTGGTATT+CGG | 0.232114 | 4_4:-38283909 | Msa0679810:CDS |
| GCAGCTTCAGCCACATCTTT+TGG | 0.275458 | 4_4:+38283772 | None:intergenic |
| AACTTGACTGGCGTCTTTCT+TGG | 0.291159 | 4_4:-38284084 | Msa0679810:CDS |
| ACAAATTTCTTTAAGCTTGA+TGG | 0.305258 | 4_4:-38283844 | Msa0679810:CDS |
| TTTAATCACATCTTCAAATT+CGG | 0.341039 | 4_4:+38284110 | None:intergenic |
| GATGTTTATTCTAACCTAAA+AGG | 0.341199 | 4_4:-38283808 | Msa0679810:CDS |
| GCTTGGGCCATTTGGTATTC+GGG | 0.360522 | 4_4:-38283908 | Msa0679810:CDS |
| GCCATCGAGCTTGGGCCATT+TGG | 0.371069 | 4_4:-38283916 | Msa0679810:CDS |
| GATATCTAGTTTACCGTACT+TGG | 0.373680 | 4_4:+38284194 | None:intergenic |
| TTCTTTAAGCTTGATGGTGG+TGG | 0.385481 | 4_4:-38283838 | Msa0679810:CDS |
| CTTGGAAACGGTTGTGTTCA+CGG | 0.391770 | 4_4:+38284212 | None:intergenic |
| TCTTTAAGCTTGATGGTGGT+GGG | 0.398255 | 4_4:-38283837 | Msa0679810:CDS |
| GGCTGAAGCTGCTCTGTACT+TGG | 0.402325 | 4_4:-38283761 | Msa0679810:CDS |
| GGTCATAATCTTGTCATAGA+TGG | 0.407106 | 4_4:-38283712 | Msa0679810:CDS |
| AACTTGTTTATACCTTCTTA+AGG | 0.422188 | 4_4:+38285003 | None:intergenic |
| ATTGATGATAAAGTAATTGT+TGG | 0.424504 | 4_4:-38283581 | Msa0679810:three_prime_UTR |
| TAGAGTGTCCTTTGTCGTCT+TGG | 0.425344 | 4_4:+38284310 | None:intergenic |
| GTGGTAACACACGGAACTTA+TGG | 0.428207 | 4_4:+38285224 | None:intergenic |
| ACCGGTGGTGCGAGCGGCAT+CGG | 0.434462 | 4_4:-38284390 | Msa0679810:CDS |
| TTAAAGAAATTTGTAACCAT+TGG | 0.434965 | 4_4:+38283853 | None:intergenic |
| ATTAACACGGCTAGTGTTTG+TGG | 0.440870 | 4_4:-38284012 | Msa0679810:CDS |
| TTAATATGTAGTTGCCTTCG+TGG | 0.442808 | 4_4:+38285198 | None:intergenic |
| GATGAGTCTAAGTATGTTAG+TGG | 0.446032 | 4_4:-38283733 | Msa0679810:CDS |
| GGGAAGGTGGCTCTGATCAC+CGG | 0.449053 | 4_4:-38284408 | Msa0679810:CDS |
| AGTTCAAAGCACGCCGTTGT+TGG | 0.452888 | 4_4:-38283955 | Msa0679810:CDS |
| AGAAACACGGCCATCGAGCT+TGG | 0.453101 | 4_4:-38283925 | Msa0679810:CDS |
| GTTCAAAGCACGCCGTTGTT+GGG | 0.459124 | 4_4:-38283954 | Msa0679810:CDS |
| GAAACACGGCCATCGAGCTT+GGG | 0.462576 | 4_4:-38283924 | Msa0679810:CDS |
| AACACAACCGTTTCCAAGTA+CGG | 0.463216 | 4_4:-38284207 | Msa0679810:CDS |
| GGTTATGATCCCCGCTCGAC+GGG | 0.465924 | 4_4:-38284043 | Msa0679810:CDS |
| AACGACTTGAGCTCCTTGCT+TGG | 0.474776 | 4_4:+38284344 | None:intergenic |
| TCTCATAATGTGACAAATCA+AGG | 0.479921 | 4_4:+38283414 | None:intergenic |
| ATTTACAAGGCTTGAGGGGA+AGG | 0.480148 | 4_4:-38284424 | Msa0679810:intron |
| AATTCATTTACAAGGCTTGA+GGG | 0.492849 | 4_4:-38284429 | Msa0679810:intron |
| ACCGATGCCGCTCGCACCAC+CGG | 0.493419 | 4_4:+38284389 | None:intergenic |
| ATTATGCTACCCCGTCGAGC+GGG | 0.496710 | 4_4:+38284033 | None:intergenic |
| ATTCATTATTGGTAAATGGT+TGG | 0.497500 | 4_4:-38285292 | None:intergenic |
| ATTGGAGTCGCAAGAACATA+AGG | 0.499291 | 4_4:+38283871 | None:intergenic |
| AACAATGGCAACCGTTCCAT+TGG | 0.500328 | 4_4:-38285035 | Msa0679810:exon |
| AGTGTTTGTGGAAGCATTGG+TGG | 0.502765 | 4_4:-38284000 | Msa0679810:CDS |
| TAGTTTACCGTACTTGGAAA+CGG | 0.505519 | 4_4:+38284200 | None:intergenic |
| CGAGGAGAAATATAGCTGTA+TGG | 0.513476 | 4_4:+38285081 | None:intergenic |
| GGGTTATGATCCCCGCTCGA+CGG | 0.522021 | 4_4:-38284044 | Msa0679810:CDS |
| CAATTCACCCGAATACCAAA+TGG | 0.524070 | 4_4:+38283901 | None:intergenic |
| GTGATTAAAGTAAACTTGAC+TGG | 0.532400 | 4_4:-38284096 | Msa0679810:CDS |
| TTGGAACAAAGCATGCATCA+AGG | 0.537428 | 4_4:-38284065 | Msa0679810:CDS |
| GAATTCATTTACAAGGCTTG+AGG | 0.537823 | 4_4:-38284430 | Msa0679810:intron |
| TTATGTTCTTGCGACTCCAA+TGG | 0.545527 | 4_4:-38283869 | Msa0679810:CDS |
| CTTTAAGCTTGATGGTGGTG+GGG | 0.546290 | 4_4:-38283836 | Msa0679810:CDS |
| GCTGAAGCTGCTCTGTACTT+GGG | 0.550906 | 4_4:-38283760 | Msa0679810:CDS |
| CTTAAGGCATTAGAGACCAA+TGG | 0.551569 | 4_4:+38285019 | None:intergenic |
| GGATTCAGCGTTGGAAACAA+TGG | 0.558181 | 4_4:-38283688 | Msa0679810:CDS |
| TGGAACAAAGCATGCATCAA+GGG | 0.564084 | 4_4:-38284064 | Msa0679810:CDS |
| CTGATCACCGGTGGTGCGAG+CGG | 0.567749 | 4_4:-38284396 | Msa0679810:CDS |
| TGTCACGTCACAGCGAACAT+AGG | 0.574891 | 4_4:+38284257 | None:intergenic |
| AATTTCTTTAAGCTTGATGG+TGG | 0.575513 | 4_4:-38283841 | Msa0679810:CDS |
| TGGTCTCTAATGCCTTAAGA+AGG | 0.576031 | 4_4:-38285015 | Msa0679810:intron |
| GCAAGACTCTTCTCCAAGCA+AGG | 0.577004 | 4_4:-38284357 | Msa0679810:CDS |
| ACCAAATGGCCCAAGCTCGA+TGG | 0.578224 | 4_4:+38283915 | None:intergenic |
| CTTGGAGAAGAGTCTTGCAG+TGG | 0.582876 | 4_4:+38284362 | None:intergenic |
| TACAAGGCTTGAGGGGAAGG+TGG | 0.585321 | 4_4:-38284421 | Msa0679810:intron |
| GATATCATGTTTAACAACGC+TGG | 0.588151 | 4_4:-38284177 | Msa0679810:CDS |
| CATAATCTTGTCATAGATGG+AGG | 0.590591 | 4_4:-38283709 | Msa0679810:CDS |
| GCTAGTGTTTGTGGAAGCAT+TGG | 0.592012 | 4_4:-38284003 | Msa0679810:CDS |
| TTCAAGTTTCTGGATAGTCG+AGG | 0.593049 | 4_4:+38285063 | None:intergenic |
| TTATGCTACCCCGTCGAGCG+GGG | 0.597671 | 4_4:+38284034 | None:intergenic |
| ATAGATGGAGGATTCAGCGT+TGG | 0.602250 | 4_4:-38283697 | Msa0679810:CDS |
| TTTAACAACGCTGGCATAAG+CGG | 0.605608 | 4_4:-38284168 | Msa0679810:CDS |
| GGCATTAGAGACCAATGGAA+CGG | 0.606755 | 4_4:+38285024 | None:intergenic |
| TATCATCAATCATATAATGT+CGG | 0.609756 | 4_4:+38283594 | None:intergenic |
| TGTTCGCTGTGACGTGACAA+AGG | 0.613627 | 4_4:-38284253 | Msa0679810:CDS |
| TTTGAACTTGTGTAGGCATG+TGG | 0.618438 | 4_4:+38283970 | None:intergenic |
| ATAAGTTCCGTGTGTTACCA+CGG | 0.619742 | 4_4:-38285222 | Msa0679810:five_prime_UTR |
| GGCGTGCTTTGAACTTGTGT+AGG | 0.622128 | 4_4:+38283963 | None:intergenic |
| ACAGCGAACATAGGAAGAAG+AGG | 0.628803 | 4_4:+38284266 | None:intergenic |
| GAAACTTGAAAAGCTAACAA+TGG | 0.631961 | 4_4:-38285050 | Msa0679810:exon |
| TCGTGGACCGTGGTAACACA+CGG | 0.636500 | 4_4:+38285215 | None:intergenic |
| TGGTGCGAGCGGCATCGGTG+AGG | 0.642225 | 4_4:-38284385 | Msa0679810:CDS |
| ATTCATTTACAAGGCTTGAG+GGG | 0.651199 | 4_4:-38284428 | Msa0679810:intron |
| AAGGTGGCTCTGATCACCGG+TGG | 0.652302 | 4_4:-38284405 | Msa0679810:CDS |
| GTTTCTCATCAGCCCAACAA+CGG | 0.652719 | 4_4:+38283942 | None:intergenic |
| GCTGACATCCAAGACGACAA+AGG | 0.668183 | 4_4:-38284318 | Msa0679810:CDS |
| GTAGTTGCCTTCGTGGACCG+TGG | 0.672954 | 4_4:+38285205 | None:intergenic |
| GTTATGATCCCCGCTCGACG+GGG | 0.674081 | 4_4:-38284042 | Msa0679810:CDS |
| AATTATGCTACCCCGTCGAG+CGG | 0.674229 | 4_4:+38284032 | None:intergenic |
| TGTTGGGCTGATGAGAAACA+CGG | 0.693612 | 4_4:-38283938 | Msa0679810:CDS |
| TGTGTTACCACGGTCCACGA+AGG | 0.703120 | 4_4:-38285212 | Msa0679810:five_prime_UTR |
| ACGGGGTAGCATAATTAACA+CGG | 0.731747 | 4_4:-38284025 | Msa0679810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAAAAATTAAAACATG+TGG | - | chr4_4:38283398-38283417 | Msa0679810:three_prime_UTR | 10.0% |
| !!! | ATTTATTTTCTGTATATTAA+TGG | - | chr4_4:38283684-38283703 | Msa0679810:CDS | 10.0% |
| !!! | TATTTTTTTTATAACCTATA+AGG | + | chr4_4:38283886-38283905 | None:intergenic | 10.0% |
| !!! | TTTTTAAAAATTAAAACATG+TGG | - | chr4_4:38283398-38283417 | Msa0679810:three_prime_UTR | 10.0% |
| !!! | ATTTATTTTCTGTATATTAA+TGG | - | chr4_4:38283684-38283703 | Msa0679810:CDS | 10.0% |
| !!! | TATTTTTTTTATAACCTATA+AGG | + | chr4_4:38283886-38283905 | None:intergenic | 10.0% |
| !! | TACAGAAAATAAATGAAATA+AGG | + | chr4_4:38283678-38283697 | None:intergenic | 15.0% |
| !! | GATTTATGAAAAAATATAAG+TGG | - | chr4_4:38283780-38283799 | Msa0679810:CDS | 15.0% |
| !!! | TTATTTTACTTAAATTTGTG+TGG | + | chr4_4:38283829-38283848 | None:intergenic | 15.0% |
| !!! | ATTTTATATAATAAGCACAA+TGG | - | chr4_4:38284137-38284156 | Msa0679810:CDS | 15.0% |
| !!! | TTTTATATAATAAGCACAAT+GGG | - | chr4_4:38284138-38284157 | Msa0679810:CDS | 15.0% |
| !! | TACAGAAAATAAATGAAATA+AGG | + | chr4_4:38283678-38283697 | None:intergenic | 15.0% |
| !! | GATTTATGAAAAAATATAAG+TGG | - | chr4_4:38283780-38283799 | Msa0679810:CDS | 15.0% |
| !!! | TTATTTTACTTAAATTTGTG+TGG | + | chr4_4:38283829-38283848 | None:intergenic | 15.0% |
| !!! | ATTTTATATAATAAGCACAA+TGG | - | chr4_4:38284137-38284156 | Msa0679810:CDS | 15.0% |
| !!! | TTTTATATAATAAGCACAAT+GGG | - | chr4_4:38284138-38284157 | Msa0679810:CDS | 15.0% |
| !!! | TCATTTTTTCAATAGTACTA+AGG | + | chr4_4:38283485-38283504 | None:intergenic | 20.0% |
| !! | TTGAAAAAATGATTAAAGCT+TGG | - | chr4_4:38283493-38283512 | Msa0679810:three_prime_UTR | 20.0% |
| !! | TGAAAAAATGATTAAAGCTT+GGG | - | chr4_4:38283494-38283513 | Msa0679810:three_prime_UTR | 20.0% |
| !! | CATAAATCGTATATTTATGT+AGG | + | chr4_4:38283768-38283787 | None:intergenic | 20.0% |
| !!! | GATAGATGACTTTTTAAAAA+GGG | + | chr4_4:38283987-38284006 | None:intergenic | 20.0% |
| !!! | TGATAGATGACTTTTTAAAA+AGG | + | chr4_4:38283988-38284007 | None:intergenic | 20.0% |
| !! | AACTTCATTACAATTCTATA+AGG | + | chr4_4:38284170-38284189 | None:intergenic | 20.0% |
| !! | TTTAATCACATCTTCAAATT+CGG | + | chr4_4:38284539-38284558 | None:intergenic | 20.0% |
| !! | TTAAAGAAATTTGTAACCAT+TGG | + | chr4_4:38284796-38284815 | None:intergenic | 20.0% |
| !! | TATCATCAATCATATAATGT+CGG | + | chr4_4:38285055-38285074 | None:intergenic | 20.0% |
| !!! | ATTGATGATAAAGTAATTGT+TGG | - | chr4_4:38285065-38285084 | Msa0679810:five_prime_UTR | 20.0% |
| !!! | TCATTTTTTCAATAGTACTA+AGG | + | chr4_4:38283485-38283504 | None:intergenic | 20.0% |
| !! | TTGAAAAAATGATTAAAGCT+TGG | - | chr4_4:38283493-38283512 | Msa0679810:three_prime_UTR | 20.0% |
| !! | TGAAAAAATGATTAAAGCTT+GGG | - | chr4_4:38283494-38283513 | Msa0679810:three_prime_UTR | 20.0% |
| !! | CATAAATCGTATATTTATGT+AGG | + | chr4_4:38283768-38283787 | None:intergenic | 20.0% |
| !!! | GATAGATGACTTTTTAAAAA+GGG | + | chr4_4:38283987-38284006 | None:intergenic | 20.0% |
| !!! | TGATAGATGACTTTTTAAAA+AGG | + | chr4_4:38283988-38284007 | None:intergenic | 20.0% |
| !! | AACTTCATTACAATTCTATA+AGG | + | chr4_4:38284170-38284189 | None:intergenic | 20.0% |
| !! | TTTAATCACATCTTCAAATT+CGG | + | chr4_4:38284539-38284558 | None:intergenic | 20.0% |
| !! | TTAAAGAAATTTGTAACCAT+TGG | + | chr4_4:38284796-38284815 | None:intergenic | 20.0% |
| !! | TATCATCAATCATATAATGT+CGG | + | chr4_4:38285055-38285074 | None:intergenic | 20.0% |
| !!! | ATTGATGATAAAGTAATTGT+TGG | - | chr4_4:38285065-38285084 | Msa0679810:five_prime_UTR | 20.0% |
| !!! | TTTTTCAATAGTACTAAGGT+TGG | + | chr4_4:38283481-38283500 | None:intergenic | 25.0% |
| ! | GAAAAAATGATTAAAGCTTG+GGG | - | chr4_4:38283495-38283514 | Msa0679810:three_prime_UTR | 25.0% |
| !! | AACTTGTTTATACCTTCTTA+AGG | + | chr4_4:38283646-38283665 | None:intergenic | 25.0% |
| !! | CGTATATTTATGTAGGATTT+TGG | + | chr4_4:38283761-38283780 | None:intergenic | 25.0% |
| ! | AAATATAAGTGGACATTTGA+AGG | - | chr4_4:38283791-38283810 | Msa0679810:CDS | 25.0% |
| !!! | CTAATATGTTATAGCCTTAT+AGG | - | chr4_4:38283869-38283888 | Msa0679810:CDS | 25.0% |
| ! | TTGAAAAATGAGAATCTGAA+GGG | + | chr4_4:38284069-38284088 | None:intergenic | 25.0% |
| ! | TTTGAAAAATGAGAATCTGA+AGG | + | chr4_4:38284070-38284089 | None:intergenic | 25.0% |
| ! | ACAAATTTCTTTAAGCTTGA+TGG | - | chr4_4:38284802-38284821 | Msa0679810:intron | 25.0% |
| ! | GATGTTTATTCTAACCTAAA+AGG | - | chr4_4:38284838-38284857 | Msa0679810:intron | 25.0% |
| !! | TAATTTTATGCCAAAAGATG+TGG | - | chr4_4:38284864-38284883 | Msa0679810:intron | 25.0% |
| !!! | TTTTTCAATAGTACTAAGGT+TGG | + | chr4_4:38283481-38283500 | None:intergenic | 25.0% |
| ! | GAAAAAATGATTAAAGCTTG+GGG | - | chr4_4:38283495-38283514 | Msa0679810:three_prime_UTR | 25.0% |
| !! | AACTTGTTTATACCTTCTTA+AGG | + | chr4_4:38283646-38283665 | None:intergenic | 25.0% |
| !! | CGTATATTTATGTAGGATTT+TGG | + | chr4_4:38283761-38283780 | None:intergenic | 25.0% |
| ! | AAATATAAGTGGACATTTGA+AGG | - | chr4_4:38283791-38283810 | Msa0679810:CDS | 25.0% |
| !!! | CTAATATGTTATAGCCTTAT+AGG | - | chr4_4:38283869-38283888 | Msa0679810:CDS | 25.0% |
| ! | TTGAAAAATGAGAATCTGAA+GGG | + | chr4_4:38284069-38284088 | None:intergenic | 25.0% |
| ! | TTTGAAAAATGAGAATCTGA+AGG | + | chr4_4:38284070-38284089 | None:intergenic | 25.0% |
| ! | ACAAATTTCTTTAAGCTTGA+TGG | - | chr4_4:38284802-38284821 | Msa0679810:intron | 25.0% |
| ! | GATGTTTATTCTAACCTAAA+AGG | - | chr4_4:38284838-38284857 | Msa0679810:intron | 25.0% |
| !! | TAATTTTATGCCAAAAGATG+TGG | - | chr4_4:38284864-38284883 | Msa0679810:intron | 25.0% |
| !!! | TTGTTAGCTTTTCAAGTTTC+TGG | + | chr4_4:38283596-38283615 | None:intergenic | 30.0% |
| GAAACTTGAAAAGCTAACAA+TGG | - | chr4_4:38283596-38283615 | Msa0679810:three_prime_UTR | 30.0% | |
| !! | TAGGATTTTGGAGATAATCA+CGG | + | chr4_4:38283749-38283768 | None:intergenic | 30.0% |
| AATGAATTCAGCATGACAAA+TGG | + | chr4_4:38284205-38284224 | None:intergenic | 30.0% | |
| TCATGCTGAATTCATTTACA+AGG | - | chr4_4:38284209-38284228 | Msa0679810:CDS | 30.0% | |
| AATTCATTTACAAGGCTTGA+GGG | - | chr4_4:38284217-38284236 | Msa0679810:CDS | 30.0% | |
| GTGATTAAAGTAAACTTGAC+TGG | - | chr4_4:38284550-38284569 | Msa0679810:intron | 30.0% | |
| AATTTCTTTAAGCTTGATGG+TGG | - | chr4_4:38284805-38284824 | Msa0679810:intron | 30.0% | |
| ! | GCATAAAATTAGCACCTTTT+AGG | + | chr4_4:38284855-38284874 | None:intergenic | 30.0% |
| !!! | GCAGTCATTTTTATTTCCAT+AGG | - | chr4_4:38285138-38285157 | Msa0679810:five_prime_UTR | 30.0% |
| CCTCGAATAAAAATAACCTA+TGG | + | chr4_4:38285157-38285176 | None:intergenic | 30.0% | |
| !!! | CCATAGGTTATTTTTATTCG+AGG | - | chr4_4:38285154-38285173 | Msa0679810:five_prime_UTR | 30.0% |
| !! | TTATTCGAGGCAATTTTGAT+CGG | - | chr4_4:38285167-38285186 | Msa0679810:five_prime_UTR | 30.0% |
| TCTCATAATGTGACAAATCA+AGG | + | chr4_4:38285235-38285254 | None:intergenic | 30.0% | |
| !!! | TTGTTAGCTTTTCAAGTTTC+TGG | + | chr4_4:38283596-38283615 | None:intergenic | 30.0% |
| GAAACTTGAAAAGCTAACAA+TGG | - | chr4_4:38283596-38283615 | Msa0679810:three_prime_UTR | 30.0% | |
| !! | TAGGATTTTGGAGATAATCA+CGG | + | chr4_4:38283749-38283768 | None:intergenic | 30.0% |
| AATGAATTCAGCATGACAAA+TGG | + | chr4_4:38284205-38284224 | None:intergenic | 30.0% | |
| TCATGCTGAATTCATTTACA+AGG | - | chr4_4:38284209-38284228 | Msa0679810:CDS | 30.0% | |
| AATTCATTTACAAGGCTTGA+GGG | - | chr4_4:38284217-38284236 | Msa0679810:CDS | 30.0% | |
| GTGATTAAAGTAAACTTGAC+TGG | - | chr4_4:38284550-38284569 | Msa0679810:intron | 30.0% | |
| AATTTCTTTAAGCTTGATGG+TGG | - | chr4_4:38284805-38284824 | Msa0679810:intron | 30.0% | |
| ! | GCATAAAATTAGCACCTTTT+AGG | + | chr4_4:38284855-38284874 | None:intergenic | 30.0% |
| !!! | GCAGTCATTTTTATTTCCAT+AGG | - | chr4_4:38285138-38285157 | Msa0679810:five_prime_UTR | 30.0% |
| CCTCGAATAAAAATAACCTA+TGG | + | chr4_4:38285157-38285176 | None:intergenic | 30.0% | |
| !!! | CCATAGGTTATTTTTATTCG+AGG | - | chr4_4:38285154-38285173 | Msa0679810:five_prime_UTR | 30.0% |
| !! | TTATTCGAGGCAATTTTGAT+CGG | - | chr4_4:38285167-38285186 | Msa0679810:five_prime_UTR | 30.0% |
| TCTCATAATGTGACAAATCA+AGG | + | chr4_4:38285235-38285254 | None:intergenic | 30.0% | |
| TTAATATGTAGTTGCCTTCG+TGG | + | chr4_4:38283451-38283470 | None:intergenic | 35.0% | |
| !! | AAGCTTGGGGCTTTATTTAA+TGG | - | chr4_4:38283508-38283527 | Msa0679810:three_prime_UTR | 35.0% |
| AGATAATCACGGACTTAAGT+TGG | + | chr4_4:38283738-38283757 | None:intergenic | 35.0% | |
| GAATTCATTTACAAGGCTTG+AGG | - | chr4_4:38284216-38284235 | Msa0679810:CDS | 35.0% | |
| ATTCATTTACAAGGCTTGAG+GGG | - | chr4_4:38284218-38284237 | Msa0679810:CDS | 35.0% | |
| TAGTTTACCGTACTTGGAAA+CGG | + | chr4_4:38284449-38284468 | None:intergenic | 35.0% | |
| ! | GATATCTAGTTTACCGTACT+TGG | + | chr4_4:38284455-38284474 | None:intergenic | 35.0% |
| GATATCATGTTTAACAACGC+TGG | - | chr4_4:38284469-38284488 | Msa0679810:intron | 35.0% | |
| GATGAGTCTAAGTATGTTAG+TGG | - | chr4_4:38284913-38284932 | Msa0679810:intron | 35.0% | |
| GGTCATAATCTTGTCATAGA+TGG | - | chr4_4:38284934-38284953 | Msa0679810:intron | 35.0% | |
| CATAATCTTGTCATAGATGG+AGG | - | chr4_4:38284937-38284956 | Msa0679810:intron | 35.0% | |
| CATGTCTTCTATAATTCGTG+CGG | - | chr4_4:38285284-38285303 | Msa0679810:five_prime_UTR | 35.0% | |
| TTAATATGTAGTTGCCTTCG+TGG | + | chr4_4:38283451-38283470 | None:intergenic | 35.0% | |
| !! | AAGCTTGGGGCTTTATTTAA+TGG | - | chr4_4:38283508-38283527 | Msa0679810:three_prime_UTR | 35.0% |
| AGATAATCACGGACTTAAGT+TGG | + | chr4_4:38283738-38283757 | None:intergenic | 35.0% | |
| GAATTCATTTACAAGGCTTG+AGG | - | chr4_4:38284216-38284235 | Msa0679810:CDS | 35.0% | |
| ATTCATTTACAAGGCTTGAG+GGG | - | chr4_4:38284218-38284237 | Msa0679810:CDS | 35.0% | |
| TAGTTTACCGTACTTGGAAA+CGG | + | chr4_4:38284449-38284468 | None:intergenic | 35.0% | |
| ! | GATATCTAGTTTACCGTACT+TGG | + | chr4_4:38284455-38284474 | None:intergenic | 35.0% |
| GATATCATGTTTAACAACGC+TGG | - | chr4_4:38284469-38284488 | Msa0679810:intron | 35.0% | |
| GATGAGTCTAAGTATGTTAG+TGG | - | chr4_4:38284913-38284932 | Msa0679810:intron | 35.0% | |
| GGTCATAATCTTGTCATAGA+TGG | - | chr4_4:38284934-38284953 | Msa0679810:intron | 35.0% | |
| CATAATCTTGTCATAGATGG+AGG | - | chr4_4:38284937-38284956 | Msa0679810:intron | 35.0% | |
| ATAAGTTCCGTGTGTTACCA+CGG | - | chr4_4:38283424-38283443 | Msa0679810:three_prime_UTR | 40.0% | |
| CGAGGAGAAATATAGCTGTA+TGG | + | chr4_4:38283568-38283587 | None:intergenic | 40.0% | |
| ! | TTCAAGTTTCTGGATAGTCG+AGG | + | chr4_4:38283586-38283605 | None:intergenic | 40.0% |
| ! | CTTAAGGCATTAGAGACCAA+TGG | + | chr4_4:38283630-38283649 | None:intergenic | 40.0% |
| TGGTCTCTAATGCCTTAAGA+AGG | - | chr4_4:38283631-38283650 | Msa0679810:three_prime_UTR | 40.0% | |
| AACACAACCGTTTCCAAGTA+CGG | - | chr4_4:38284439-38284458 | Msa0679810:intron | 40.0% | |
| TTTAACAACGCTGGCATAAG+CGG | - | chr4_4:38284478-38284497 | Msa0679810:intron | 40.0% | |
| TTGGAACAAAGCATGCATCA+AGG | - | chr4_4:38284581-38284600 | Msa0679810:intron | 40.0% | |
| TGGAACAAAGCATGCATCAA+GGG | - | chr4_4:38284582-38284601 | Msa0679810:intron | 40.0% | |
| ACGGGGTAGCATAATTAACA+CGG | - | chr4_4:38284621-38284640 | Msa0679810:intron | 40.0% | |
| ATTAACACGGCTAGTGTTTG+TGG | - | chr4_4:38284634-38284653 | Msa0679810:intron | 40.0% | |
| TTTGAACTTGTGTAGGCATG+TGG | + | chr4_4:38284679-38284698 | None:intergenic | 40.0% | |
| CAATTCACCCGAATACCAAA+TGG | + | chr4_4:38284748-38284767 | None:intergenic | 40.0% | |
| ATTGGAGTCGCAAGAACATA+AGG | + | chr4_4:38284778-38284797 | None:intergenic | 40.0% | |
| TTATGTTCTTGCGACTCCAA+TGG | - | chr4_4:38284777-38284796 | Msa0679810:intron | 40.0% | |
| !! | TTCTTTAAGCTTGATGGTGG+TGG | - | chr4_4:38284808-38284827 | Msa0679810:intron | 40.0% |
| !! | TCTTTAAGCTTGATGGTGGT+GGG | - | chr4_4:38284809-38284828 | Msa0679810:intron | 40.0% |
| ATAAGTTCCGTGTGTTACCA+CGG | - | chr4_4:38283424-38283443 | Msa0679810:three_prime_UTR | 40.0% | |
| CGAGGAGAAATATAGCTGTA+TGG | + | chr4_4:38283568-38283587 | None:intergenic | 40.0% | |
| ! | TTCAAGTTTCTGGATAGTCG+AGG | + | chr4_4:38283586-38283605 | None:intergenic | 40.0% |
| ! | CTTAAGGCATTAGAGACCAA+TGG | + | chr4_4:38283630-38283649 | None:intergenic | 40.0% |
| TGGTCTCTAATGCCTTAAGA+AGG | - | chr4_4:38283631-38283650 | Msa0679810:three_prime_UTR | 40.0% | |
| AACACAACCGTTTCCAAGTA+CGG | - | chr4_4:38284439-38284458 | Msa0679810:intron | 40.0% | |
| TTTAACAACGCTGGCATAAG+CGG | - | chr4_4:38284478-38284497 | Msa0679810:intron | 40.0% | |
| TTGGAACAAAGCATGCATCA+AGG | - | chr4_4:38284581-38284600 | Msa0679810:intron | 40.0% | |
| TGGAACAAAGCATGCATCAA+GGG | - | chr4_4:38284582-38284601 | Msa0679810:intron | 40.0% | |
| ACGGGGTAGCATAATTAACA+CGG | - | chr4_4:38284621-38284640 | Msa0679810:intron | 40.0% | |
| ATTAACACGGCTAGTGTTTG+TGG | - | chr4_4:38284634-38284653 | Msa0679810:intron | 40.0% | |
| TTTGAACTTGTGTAGGCATG+TGG | + | chr4_4:38284679-38284698 | None:intergenic | 40.0% | |
| CAATTCACCCGAATACCAAA+TGG | + | chr4_4:38284748-38284767 | None:intergenic | 40.0% | |
| ATTGGAGTCGCAAGAACATA+AGG | + | chr4_4:38284778-38284797 | None:intergenic | 40.0% | |
| TTATGTTCTTGCGACTCCAA+TGG | - | chr4_4:38284777-38284796 | Msa0679810:intron | 40.0% | |
| !! | TTCTTTAAGCTTGATGGTGG+TGG | - | chr4_4:38284808-38284827 | Msa0679810:intron | 40.0% |
| !! | TCTTTAAGCTTGATGGTGGT+GGG | - | chr4_4:38284809-38284828 | Msa0679810:intron | 40.0% |
| GTGGTAACACACGGAACTTA+TGG | + | chr4_4:38283425-38283444 | None:intergenic | 45.0% | |
| AACAATGGCAACCGTTCCAT+TGG | - | chr4_4:38283611-38283630 | Msa0679810:three_prime_UTR | 45.0% | |
| GGCATTAGAGACCAATGGAA+CGG | + | chr4_4:38283625-38283644 | None:intergenic | 45.0% | |
| ATTTACAAGGCTTGAGGGGA+AGG | - | chr4_4:38284222-38284241 | Msa0679810:CDS | 45.0% | |
| ! | TAGAGTGTCCTTTGTCGTCT+TGG | + | chr4_4:38284339-38284358 | None:intergenic | 45.0% |
| ACAGCGAACATAGGAAGAAG+AGG | + | chr4_4:38284383-38284402 | None:intergenic | 45.0% | |
| CTTGGAAACGGTTGTGTTCA+CGG | + | chr4_4:38284437-38284456 | None:intergenic | 45.0% | |
| AACTTGACTGGCGTCTTTCT+TGG | - | chr4_4:38284562-38284581 | Msa0679810:intron | 45.0% | |
| ! | GCTAGTGTTTGTGGAAGCAT+TGG | - | chr4_4:38284643-38284662 | Msa0679810:intron | 45.0% |
| !! | AGTGTTTGTGGAAGCATTGG+TGG | - | chr4_4:38284646-38284665 | Msa0679810:intron | 45.0% |
| GTTTCTCATCAGCCCAACAA+CGG | + | chr4_4:38284707-38284726 | None:intergenic | 45.0% | |
| TGTTGGGCTGATGAGAAACA+CGG | - | chr4_4:38284708-38284727 | Msa0679810:intron | 45.0% | |
| AGCTTGGGCCATTTGGTATT+CGG | - | chr4_4:38284737-38284756 | Msa0679810:intron | 45.0% | |
| !! | CTTTAAGCTTGATGGTGGTG+GGG | - | chr4_4:38284810-38284829 | Msa0679810:intron | 45.0% |
| ATAGATGGAGGATTCAGCGT+TGG | - | chr4_4:38284949-38284968 | Msa0679810:intron | 45.0% | |
| ! | GGATTCAGCGTTGGAAACAA+TGG | - | chr4_4:38284958-38284977 | Msa0679810:intron | 45.0% |
| GTGGTAACACACGGAACTTA+TGG | + | chr4_4:38283425-38283444 | None:intergenic | 45.0% | |
| AACAATGGCAACCGTTCCAT+TGG | - | chr4_4:38283611-38283630 | Msa0679810:three_prime_UTR | 45.0% | |
| GGCATTAGAGACCAATGGAA+CGG | + | chr4_4:38283625-38283644 | None:intergenic | 45.0% | |
| ATTTACAAGGCTTGAGGGGA+AGG | - | chr4_4:38284222-38284241 | Msa0679810:CDS | 45.0% | |
| ! | TAGAGTGTCCTTTGTCGTCT+TGG | + | chr4_4:38284339-38284358 | None:intergenic | 45.0% |
| ACAGCGAACATAGGAAGAAG+AGG | + | chr4_4:38284383-38284402 | None:intergenic | 45.0% | |
| CTTGGAAACGGTTGTGTTCA+CGG | + | chr4_4:38284437-38284456 | None:intergenic | 45.0% | |
| AACTTGACTGGCGTCTTTCT+TGG | - | chr4_4:38284562-38284581 | Msa0679810:intron | 45.0% | |
| ! | GCTAGTGTTTGTGGAAGCAT+TGG | - | chr4_4:38284643-38284662 | Msa0679810:intron | 45.0% |
| !! | AGTGTTTGTGGAAGCATTGG+TGG | - | chr4_4:38284646-38284665 | Msa0679810:intron | 45.0% |
| GTTTCTCATCAGCCCAACAA+CGG | + | chr4_4:38284707-38284726 | None:intergenic | 45.0% | |
| TGTTGGGCTGATGAGAAACA+CGG | - | chr4_4:38284708-38284727 | Msa0679810:intron | 45.0% | |
| AGCTTGGGCCATTTGGTATT+CGG | - | chr4_4:38284737-38284756 | Msa0679810:intron | 45.0% | |
| !! | CTTTAAGCTTGATGGTGGTG+GGG | - | chr4_4:38284810-38284829 | Msa0679810:intron | 45.0% |
| ATAGATGGAGGATTCAGCGT+TGG | - | chr4_4:38284949-38284968 | Msa0679810:intron | 45.0% | |
| ! | GGATTCAGCGTTGGAAACAA+TGG | - | chr4_4:38284958-38284977 | Msa0679810:intron | 45.0% |
| CTTGGAGAAGAGTCTTGCAG+TGG | + | chr4_4:38284287-38284306 | None:intergenic | 50.0% | |
| GCAAGACTCTTCTCCAAGCA+AGG | - | chr4_4:38284289-38284308 | Msa0679810:CDS | 50.0% | |
| AACGACTTGAGCTCCTTGCT+TGG | + | chr4_4:38284305-38284324 | None:intergenic | 50.0% | |
| GCTGACATCCAAGACGACAA+AGG | - | chr4_4:38284328-38284347 | Msa0679810:CDS | 50.0% | |
| TGTCACGTCACAGCGAACAT+AGG | + | chr4_4:38284392-38284411 | None:intergenic | 50.0% | |
| TGTTCGCTGTGACGTGACAA+AGG | - | chr4_4:38284393-38284412 | Msa0679810:CDS | 50.0% | |
| AATTATGCTACCCCGTCGAG+CGG | + | chr4_4:38284617-38284636 | None:intergenic | 50.0% | |
| ! | GGCGTGCTTTGAACTTGTGT+AGG | + | chr4_4:38284686-38284705 | None:intergenic | 50.0% |
| AGTTCAAAGCACGCCGTTGT+TGG | - | chr4_4:38284691-38284710 | Msa0679810:intron | 50.0% | |
| GTTCAAAGCACGCCGTTGTT+GGG | - | chr4_4:38284692-38284711 | Msa0679810:intron | 50.0% | |
| GCTTGGGCCATTTGGTATTC+GGG | - | chr4_4:38284738-38284757 | Msa0679810:intron | 50.0% | |
| ! | GCAGCTTCAGCCACATCTTT+TGG | + | chr4_4:38284877-38284896 | None:intergenic | 50.0% |
| GCTGAAGCTGCTCTGTACTT+GGG | - | chr4_4:38284886-38284905 | Msa0679810:intron | 50.0% | |
| CTTGGAGAAGAGTCTTGCAG+TGG | + | chr4_4:38284287-38284306 | None:intergenic | 50.0% | |
| GCAAGACTCTTCTCCAAGCA+AGG | - | chr4_4:38284289-38284308 | Msa0679810:CDS | 50.0% | |
| AACGACTTGAGCTCCTTGCT+TGG | + | chr4_4:38284305-38284324 | None:intergenic | 50.0% | |
| GCTGACATCCAAGACGACAA+AGG | - | chr4_4:38284328-38284347 | Msa0679810:CDS | 50.0% | |
| TGTCACGTCACAGCGAACAT+AGG | + | chr4_4:38284392-38284411 | None:intergenic | 50.0% | |
| TGTTCGCTGTGACGTGACAA+AGG | - | chr4_4:38284393-38284412 | Msa0679810:CDS | 50.0% | |
| AATTATGCTACCCCGTCGAG+CGG | + | chr4_4:38284617-38284636 | None:intergenic | 50.0% | |
| ! | GGCGTGCTTTGAACTTGTGT+AGG | + | chr4_4:38284686-38284705 | None:intergenic | 50.0% |
| AGTTCAAAGCACGCCGTTGT+TGG | - | chr4_4:38284691-38284710 | Msa0679810:intron | 50.0% | |
| GTTCAAAGCACGCCGTTGTT+GGG | - | chr4_4:38284692-38284711 | Msa0679810:intron | 50.0% | |
| GCTTGGGCCATTTGGTATTC+GGG | - | chr4_4:38284738-38284757 | Msa0679810:intron | 50.0% | |
| ! | GCAGCTTCAGCCACATCTTT+TGG | + | chr4_4:38284877-38284896 | None:intergenic | 50.0% |
| GCTGAAGCTGCTCTGTACTT+GGG | - | chr4_4:38284886-38284905 | Msa0679810:intron | 50.0% | |
| TCGTGGACCGTGGTAACACA+CGG | + | chr4_4:38283434-38283453 | None:intergenic | 55.0% | |
| TGTGTTACCACGGTCCACGA+AGG | - | chr4_4:38283434-38283453 | Msa0679810:three_prime_UTR | 55.0% | |
| TACAAGGCTTGAGGGGAAGG+TGG | - | chr4_4:38284225-38284244 | Msa0679810:CDS | 55.0% | |
| ATTATGCTACCCCGTCGAGC+GGG | + | chr4_4:38284616-38284635 | None:intergenic | 55.0% | |
| AGAAACACGGCCATCGAGCT+TGG | - | chr4_4:38284721-38284740 | Msa0679810:intron | 55.0% | |
| GAAACACGGCCATCGAGCTT+GGG | - | chr4_4:38284722-38284741 | Msa0679810:intron | 55.0% | |
| ACCAAATGGCCCAAGCTCGA+TGG | + | chr4_4:38284734-38284753 | None:intergenic | 55.0% | |
| GGCTGAAGCTGCTCTGTACT+TGG | - | chr4_4:38284885-38284904 | Msa0679810:intron | 55.0% | |
| TCGTGGACCGTGGTAACACA+CGG | + | chr4_4:38283434-38283453 | None:intergenic | 55.0% | |
| TGTGTTACCACGGTCCACGA+AGG | - | chr4_4:38283434-38283453 | Msa0679810:three_prime_UTR | 55.0% | |
| TACAAGGCTTGAGGGGAAGG+TGG | - | chr4_4:38284225-38284244 | Msa0679810:CDS | 55.0% | |
| ATTATGCTACCCCGTCGAGC+GGG | + | chr4_4:38284616-38284635 | None:intergenic | 55.0% | |
| AGAAACACGGCCATCGAGCT+TGG | - | chr4_4:38284721-38284740 | Msa0679810:intron | 55.0% | |
| GAAACACGGCCATCGAGCTT+GGG | - | chr4_4:38284722-38284741 | Msa0679810:intron | 55.0% | |
| ACCAAATGGCCCAAGCTCGA+TGG | + | chr4_4:38284734-38284753 | None:intergenic | 55.0% | |
| GGCTGAAGCTGCTCTGTACT+TGG | - | chr4_4:38284885-38284904 | Msa0679810:intron | 55.0% | |
| GTAGTTGCCTTCGTGGACCG+TGG | + | chr4_4:38283444-38283463 | None:intergenic | 60.0% | |
| !! | GGGAAGGTGGCTCTGATCAC+CGG | - | chr4_4:38284238-38284257 | Msa0679810:CDS | 60.0% |
| !! | AAGGTGGCTCTGATCACCGG+TGG | - | chr4_4:38284241-38284260 | Msa0679810:CDS | 60.0% |
| GGGTTATGATCCCCGCTCGA+CGG | - | chr4_4:38284602-38284621 | Msa0679810:intron | 60.0% | |
| GGTTATGATCCCCGCTCGAC+GGG | - | chr4_4:38284603-38284622 | Msa0679810:intron | 60.0% | |
| GTTATGATCCCCGCTCGACG+GGG | - | chr4_4:38284604-38284623 | Msa0679810:intron | 60.0% | |
| TTATGCTACCCCGTCGAGCG+GGG | + | chr4_4:38284615-38284634 | None:intergenic | 60.0% | |
| GCCATCGAGCTTGGGCCATT+TGG | - | chr4_4:38284730-38284749 | Msa0679810:intron | 60.0% | |
| GTAGTTGCCTTCGTGGACCG+TGG | + | chr4_4:38283444-38283463 | None:intergenic | 60.0% | |
| !! | GGGAAGGTGGCTCTGATCAC+CGG | - | chr4_4:38284238-38284257 | Msa0679810:CDS | 60.0% |
| !! | AAGGTGGCTCTGATCACCGG+TGG | - | chr4_4:38284241-38284260 | Msa0679810:CDS | 60.0% |
| GGGTTATGATCCCCGCTCGA+CGG | - | chr4_4:38284602-38284621 | Msa0679810:intron | 60.0% | |
| GGTTATGATCCCCGCTCGAC+GGG | - | chr4_4:38284603-38284622 | Msa0679810:intron | 60.0% | |
| GTTATGATCCCCGCTCGACG+GGG | - | chr4_4:38284604-38284623 | Msa0679810:intron | 60.0% | |
| TTATGCTACCCCGTCGAGCG+GGG | + | chr4_4:38284615-38284634 | None:intergenic | 60.0% | |
| GCCATCGAGCTTGGGCCATT+TGG | - | chr4_4:38284730-38284749 | Msa0679810:intron | 60.0% | |
| CTGATCACCGGTGGTGCGAG+CGG | - | chr4_4:38284250-38284269 | Msa0679810:CDS | 65.0% | |
| CTGATCACCGGTGGTGCGAG+CGG | - | chr4_4:38284250-38284269 | Msa0679810:CDS | 65.0% | |
| ACCGGTGGTGCGAGCGGCAT+CGG | - | chr4_4:38284256-38284275 | Msa0679810:CDS | 70.0% | |
| ACCGATGCCGCTCGCACCAC+CGG | + | chr4_4:38284260-38284279 | None:intergenic | 70.0% | |
| !! | TGGTGCGAGCGGCATCGGTG+AGG | - | chr4_4:38284261-38284280 | Msa0679810:CDS | 70.0% |
| ACCGGTGGTGCGAGCGGCAT+CGG | - | chr4_4:38284256-38284275 | Msa0679810:CDS | 70.0% | |
| ACCGATGCCGCTCGCACCAC+CGG | + | chr4_4:38284260-38284279 | None:intergenic | 70.0% | |
| !! | TGGTGCGAGCGGCATCGGTG+AGG | - | chr4_4:38284261-38284280 | Msa0679810:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 38283364 | 38285304 | 38283364 | ID=Msa0679810;Name=Msa0679810 |
| chr4_4 | mRNA | 38283364 | 38285304 | 38283364 | ID=Msa0679810-mRNA-1;Parent=Msa0679810;Name=Msa0679810-mRNA-1;_AED=0.33;_eAED=0.33;_QI=251|1|1|1|1|1|2|296|271 |
| chr4_4 | exon | 38283364 | 38284437 | 38283364 | ID=Msa0679810-mRNA-1:exon:9008;Parent=Msa0679810-mRNA-1 |
| chr4_4 | exon | 38285016 | 38285304 | 38285016 | ID=Msa0679810-mRNA-1:exon:9007;Parent=Msa0679810-mRNA-1 |
| chr4_4 | five_prime_UTR | 38285054 | 38285304 | 38285054 | ID=Msa0679810-mRNA-1:five_prime_utr;Parent=Msa0679810-mRNA-1 |
| chr4_4 | CDS | 38285016 | 38285053 | 38285016 | ID=Msa0679810-mRNA-1:cds;Parent=Msa0679810-mRNA-1 |
| chr4_4 | CDS | 38283660 | 38284437 | 38283660 | ID=Msa0679810-mRNA-1:cds;Parent=Msa0679810-mRNA-1 |
| chr4_4 | three_prime_UTR | 38283364 | 38283659 | 38283364 | ID=Msa0679810-mRNA-1:three_prime_utr;Parent=Msa0679810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
