AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0025290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0025290 MtrunA17_Chr1g0179631 83.562 730 84 7 56 764 164 878 0.0 1136
Msa0025290 MtrunA17_Chr1g0179631 73.243 370 78 4 1 355 1 364 5.68e-130 408
Msa0025290 MtrunA17_Chr3g0086081 33.779 299 165 11 417 696 1 285 2.54e-35 137
Msa0025290 MtrunA17_Chr4g0010341 32.258 155 100 2 405 554 185 339 2.73e-23 104
Msa0025290 MtrunA17_Chr4g0039731 30.120 249 163 5 404 646 165 408 2.34e-17 86.7
Msa0025290 MtrunA17_Chr4g0025081 25.767 326 207 9 302 598 113 432 1.07e-14 77.4
Msa0025290 MtrunA17_Chr1g0179111 27.344 256 146 10 326 548 145 393 2.85e-14 76.3
Msa0025290 MtrunA17_Chr1g0176161 24.449 454 278 13 317 730 51 479 1.91e-13 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 251 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATATACATGTAATGGAAAT+TGG 0.167483 1_1:-48286896 None:intergenic
GATATACAAGTAATGGAAAT+TGG 0.185502 1_1:-48287178 None:intergenic
TCACTTGATAGTGGATATTT+TGG 0.205904 1_1:-48286954 None:intergenic
AGGTTTAAAATATCCCTTTC+TGG 0.230565 1_1:-48289284 None:intergenic
GACTGTATGGCAAAGTTTAT+TGG 0.246279 1_1:+48287925 Msa0025290:CDS
CCTTGTGTTCCTTGAAATCC+TGG 0.250219 1_1:-48287329 None:intergenic
TTGTAGAACCTCAACCAAAT+TGG 0.252973 1_1:-48288599 None:intergenic
TAGGGAGTTGGTTCCCAATT+TGG 0.269466 1_1:+48288585 Msa0025290:CDS
GGCCCCTTTCTTGTAGTTGC+CGG 0.273182 1_1:-48288509 None:intergenic
TTAGGATGACTAGACTTTAA+TGG 0.313659 1_1:-48287356 None:intergenic
TCGCAAGTGGCGCACTCATC+TGG 0.324352 1_1:+48286326 Msa0025290:CDS
TTGCCCTATCGTCATCATTT+AGG 0.327091 1_1:-48287655 None:intergenic
TTCACAGACTTACCCTTTAG+TGG 0.344824 1_1:-48287477 None:intergenic
ATCTCAGCGTCCGCCTTATC+AGG 0.352764 1_1:+48287382 Msa0025290:CDS
GATACACAGCTGATGAAGTA+TGG 0.355135 1_1:-48286539 None:intergenic
TTGAGGGAAGTTCGTCTTAA+GGG 0.355793 1_1:+48287878 Msa0025290:CDS
AATGTCAATACTATCACTTC+TGG 0.364657 1_1:+48289223 Msa0025290:three_prime_UTR
AACATCTTTCCCCTTATCAT+TGG 0.367203 1_1:-48286268 None:intergenic
AAAGTAACTCGAGTAGTTTC+TGG 0.368232 1_1:+48287047 Msa0025290:CDS
ACATCTTTCCCCTTATCATT+GGG 0.370025 1_1:-48286267 None:intergenic
AGTAATGGAAATTGGGTAGA+TGG 0.384566 1_1:-48287170 None:intergenic
TACGTGTTGCGTTGTGTTGA+TGG 0.386656 1_1:-48288041 None:intergenic
TTACCTGATTCTTTCTAGAA+TGG 0.393574 1_1:-48288241 None:intergenic
TGTAATGGAAATTGGGTAGA+TGG 0.393624 1_1:-48286888 None:intergenic
TTTGAAGGTTCACTTGATAG+TGG 0.397186 1_1:-48286963 None:intergenic
TGTAGAACCTCAACCAAATT+GGG 0.399007 1_1:-48288598 None:intergenic
TATGTAGGTGGTGGATAAAT+AGG 0.400107 1_1:-48286615 None:intergenic
CATGAGTCTTAATATTCCTT+TGG 0.400784 1_1:+48288531 Msa0025290:CDS
ACTAACCCACCCAATGATAA+GGG 0.402555 1_1:+48286258 Msa0025290:CDS
TCACATAATGTCATTGCTAT+TGG 0.405215 1_1:-48290367 None:intergenic
CTAGGTGGACGCTTCTTTGA+AGG 0.409645 1_1:-48286978 None:intergenic
ACCTCGATTCCTTTGAAAAG+AGG 0.410029 1_1:+48289303 Msa0025290:three_prime_UTR
GTTGAGGGAAGTTCGTCTTA+AGG 0.412066 1_1:+48287877 Msa0025290:CDS
AAGCGTCCACCTAGTGATAA+GGG 0.413682 1_1:+48286987 Msa0025290:CDS
TGACCATTCTAGAAAGAATC+AGG 0.425997 1_1:+48288238 Msa0025290:CDS
GGCAAAGTTTATTGGAGCAT+TGG 0.431611 1_1:+48287933 Msa0025290:CDS
GTTATTCAACCTTCCACTAA+AGG 0.432341 1_1:+48287464 Msa0025290:CDS
TTATTCAACCTTCCACTAAA+GGG 0.433677 1_1:+48287465 Msa0025290:CDS
ACCACTTGTTCGGGTGTAGT+TGG 0.436086 1_1:+48288454 Msa0025290:CDS
ATATACATGTAATGGAAATT+GGG 0.437628 1_1:-48286895 None:intergenic
GTTCCTTGAAATCCTGGGTT+GGG 0.437913 1_1:-48287323 None:intergenic
TTTAGTGGATATACATGTAA+TGG 0.440301 1_1:-48286903 None:intergenic
ACTCAGATCATGAAGGAAAC+TGG 0.440348 1_1:+48288203 Msa0025290:CDS
AACTAACCCACCCAATGATA+AGG 0.441389 1_1:+48286257 Msa0025290:CDS
TGTTCCTTGAAATCCTGGGT+TGG 0.444757 1_1:-48287324 None:intergenic
TCGTCGGCACAGGTATAAAT+TGG 0.445880 1_1:-48286800 None:intergenic
AGAGGAGTTCAAACGTGAAC+GGG 0.446513 1_1:+48288168 Msa0025290:CDS
GCAGGGTTACAACTCATAGA+TGG 0.450605 1_1:-48288409 None:intergenic
TCATCGGCATAGGTATAAAC+TGG 0.451031 1_1:-48287082 None:intergenic
ATATACAAGTAATGGAAATT+GGG 0.451555 1_1:-48287177 None:intergenic
GACACCCTTCCCCTTACCAC+TGG 0.453777 1_1:-48286718 None:intergenic
CAAGCGGCCACCCAGTGGTA+AGG 0.455295 1_1:+48286707 Msa0025290:CDS
ATGCCCAACCCAGGATTTCA+AGG 0.458880 1_1:+48287320 Msa0025290:CDS
CCACCCGACAATGGATTTGT+AGG 0.461139 1_1:-48286675 None:intergenic
ATTGGATAGGCGAGACTGTA+TGG 0.461345 1_1:+48287912 Msa0025290:CDS
GTTGGTTCCCAATTTGGTTG+AGG 0.463056 1_1:+48288591 Msa0025290:CDS
CTTGTGTTCCTTGAAATCCT+GGG 0.463860 1_1:-48287328 None:intergenic
GGAGGCTGAGTATAGGTATG+AGG 0.464859 1_1:-48287128 None:intergenic
GAAGCGTCCACCTAGTGATA+AGG 0.465742 1_1:+48286986 Msa0025290:CDS
TTCTGATCATGAGTCTACTT+TGG 0.468251 1_1:+48288834 Msa0025290:CDS
GGGATTAACATGTTTGATGA+TGG 0.472319 1_1:+48287434 Msa0025290:CDS
AAACGTGAACGGGCTTCATA+AGG 0.475012 1_1:+48288178 Msa0025290:CDS
GTTCACGTTTGAACTCCTCT+TGG 0.475194 1_1:-48288165 None:intergenic
GGCACAGGTATAAATTGGTC+TGG 0.477208 1_1:-48286795 None:intergenic
TGAGAACTGGTAGGTGGAGG+TGG 0.480811 1_1:-48286861 None:intergenic
CCATCTTGACCAGCCTGATA+AGG 0.480953 1_1:-48287395 None:intergenic
CTGGGTGGCCGCTTGTGTAA+AGG 0.484039 1_1:-48286699 None:intergenic
AACCAACTCCCTACCACTAC+AGG 0.484892 1_1:-48288575 None:intergenic
AGAAACATGGCATCAAAGAA+AGG 0.485403 1_1:+48287995 Msa0025290:CDS
GGGGCAACAACATCCTTAGC+AGG 0.485567 1_1:-48288427 None:intergenic
TGATCATGAGTCTACTTTGG+TGG 0.485914 1_1:+48288837 Msa0025290:CDS
GCTAGAATGACTAGTGGTAA+TGG 0.486198 1_1:-48286745 None:intergenic
CAACTGCACTTTACCAGAAA+GGG 0.486789 1_1:+48289271 Msa0025290:three_prime_UTR
GAAACATGGCATCAAAGAAA+GGG 0.487800 1_1:+48287996 Msa0025290:CDS
CATTCTAGCAAGGTAACTCC+TGG 0.488789 1_1:+48286759 Msa0025290:CDS
TCTTTCCCCTTATCATTGGG+TGG 0.488915 1_1:-48286264 None:intergenic
TTGAAATCCTGGGTTGGGCA+TGG 0.490031 1_1:-48287318 None:intergenic
ATGCCGGCAACTACAAGAAA+GGG 0.492635 1_1:+48288506 Msa0025290:CDS
TGCGGTGGATATACAAGTAA+TGG 0.493457 1_1:-48287185 None:intergenic
CCACCGAAACTTACACCATC+GGG 0.496584 1_1:+48286579 Msa0025290:CDS
GACAATGGATTTGTAGGTGG+TGG 0.498910 1_1:-48286669 None:intergenic
CTTTCCCCTTATCATTGGGT+GGG 0.499770 1_1:-48286263 None:intergenic
TGAGTATAGGTATGAGGAGA+TGG 0.499968 1_1:-48287122 None:intergenic
AACGCAACACGTAACTCAAA+TGG 0.500116 1_1:+48288051 Msa0025290:CDS
GATCATGAGTCTACTTTGGT+GGG 0.501918 1_1:+48288838 Msa0025290:CDS
GCCACCCAGTGGTAAGGGGA+AGG 0.502442 1_1:+48286713 Msa0025290:CDS
GAAGTATGGGTAGGTGGAGG+CGG 0.502512 1_1:-48286525 None:intergenic
GGTAGATGGAGATTGAGAAC+TGG 0.505071 1_1:-48286874 None:intergenic
GATATCGCATCCACTACTAA+TGG 0.505243 1_1:+48287014 Msa0025290:CDS
CCACCTACAAATCCATTGTC+GGG 0.509021 1_1:+48286672 Msa0025290:CDS
CAATAGATAAACATGTCATC+AGG 0.512057 1_1:+48286231 None:intergenic
AGCCTGTAGTGGTAGGGAGT+TGG 0.512995 1_1:+48288573 Msa0025290:CDS
GATCAGAAGGTTGGAGGCGG+CGG 0.513611 1_1:-48288819 None:intergenic
ATAGGTATAAACTGGTCTAA+AGG 0.514240 1_1:-48287074 None:intergenic
GGAACATAGGTACGAGGAGA+TGG 0.514609 1_1:-48286840 None:intergenic
TAGACTCATGATCAGAAGGT+TGG 0.515338 1_1:-48288828 None:intergenic
CAAAGGAATATTAAGACTCA+TGG 0.516583 1_1:-48288530 None:intergenic
GTGTAGTTGGAGGTAAGAAA+AGG 0.517698 1_1:+48288467 Msa0025290:CDS
AAAAGCCACAGACAAAATGT+AGG 0.518392 1_1:+48287624 Msa0025290:CDS
CATCGTTAGCCTGTAGTGGT+AGG 0.519129 1_1:+48288566 Msa0025290:CDS
AAGCGGCCACCCAGTGGTAA+GGG 0.520413 1_1:+48286708 Msa0025290:CDS
GGTAGGTGGAGGCTGAGTAT+AGG 0.521908 1_1:-48287135 None:intergenic
TTGCTGAAGAAACGGACAGA+GGG 0.522070 1_1:+48288697 Msa0025290:CDS
ACCACCTACAAATCCATTGT+CGG 0.522590 1_1:+48286671 Msa0025290:CDS
GGAGGCGGCGGTGACGTCCA+TGG 0.522976 1_1:-48288807 None:intergenic
GATGGTGCATATGCATTTAG+TGG 0.525647 1_1:-48286918 None:intergenic
TATCCCGATGGTGTAAGTTT+CGG 0.525804 1_1:-48286582 None:intergenic
GTATCTTTAGTCAGCGGCAT+AGG 0.527229 1_1:-48286378 None:intergenic
CAGCGTCCGCCTTATCAGGC+TGG 0.530739 1_1:+48287386 Msa0025290:CDS
CCACTTGATAGTGGATATGT+AGG 0.532942 1_1:-48287266 None:intergenic
TGTGAAGGTCCACTTGATAG+TGG 0.533328 1_1:-48287275 None:intergenic
ACACCCTTCCCCTTACCACT+GGG 0.533838 1_1:-48286717 None:intergenic
CCACCCAGTGGTAAGGGGAA+GGG 0.534766 1_1:+48286714 Msa0025290:CDS
AAATTATTCGCTCAAGACCA+TGG 0.535708 1_1:+48288790 Msa0025290:CDS
GACTGAGAACGGGTAGGTGG+AGG 0.537395 1_1:-48287146 None:intergenic
TGATAAGGCGGACGCTGAGA+TGG 0.537853 1_1:-48287380 None:intergenic
ACTCGAATTTCCTCGCGAGT+AGG 0.538984 1_1:-48286438 None:intergenic
AACAGTAGGTCTAGTAGTAG+TGG 0.539497 1_1:-48286295 None:intergenic
CTACACCCGAACAAGTGGTA+AGG 0.540049 1_1:-48288450 None:intergenic
GGAGCATATGTACGAGGAGA+TGG 0.541412 1_1:-48286504 None:intergenic
GATGCCGGCAACTACAAGAA+AGG 0.541895 1_1:+48288505 Msa0025290:CDS
AGTGGTAAGGGGAAGGGTGT+CGG 0.543479 1_1:+48286720 Msa0025290:CDS
ATGTTGCATCCACTACTACT+AGG 0.543509 1_1:+48286415 Msa0025290:CDS
CAGACTTACCCTTTAGTGGA+AGG 0.544209 1_1:-48287473 None:intergenic
GTATGTGCAGTCGTCGGCAC+AGG 0.546385 1_1:-48286810 None:intergenic
ACTTGTTCGGGTGTAGTTGG+AGG 0.547278 1_1:+48288457 Msa0025290:CDS
CCTTATCAGGCTGGTCAAGA+TGG 0.548609 1_1:+48287395 Msa0025290:CDS
GGCGGACGCTGAGATGGCTT+AGG 0.550526 1_1:-48287374 None:intergenic
TCAACTGCACTTTACCAGAA+AGG 0.550910 1_1:+48289270 Msa0025290:three_prime_UTR
GTGACCTAAATGATGACGAT+AGG 0.557016 1_1:+48287651 Msa0025290:CDS
TATGAGTTGTAACCCTGCTA+AGG 0.563576 1_1:+48288414 Msa0025290:CDS
AGCGGCCACCCAGTGGTAAG+GGG 0.566990 1_1:+48286709 Msa0025290:CDS
GGAGATTGAGAACTGGTAGG+TGG 0.567399 1_1:-48286867 None:intergenic
TTTAGTTCCATGCCCAACCC+AGG 0.569175 1_1:+48287311 Msa0025290:CDS
GGTAGATGGAGACTGAGAAC+GGG 0.569951 1_1:-48287156 None:intergenic
GGCAATCAAGACGTTGATGT+TGG 0.570273 1_1:+48288859 Msa0025290:CDS
TCCAACTACACCCGAACAAG+TGG 0.570300 1_1:-48288455 None:intergenic
GGGTAGATGGAGACTGAGAA+CGG 0.570642 1_1:-48287157 None:intergenic
AAATACAGGAGAAGTGTACA+TGG 0.571389 1_1:+48287786 Msa0025290:intron
GGTCAGTGCCCACATTGGAT+AGG 0.573158 1_1:+48287899 Msa0025290:CDS
CCCGATGGTGTAAGTTTCGG+TGG 0.573397 1_1:-48286579 None:intergenic
GTCTGTGTATGTGCAGTCGT+GGG 0.574424 1_1:-48286480 None:intergenic
ATCGTTAGCCTGTAGTGGTA+GGG 0.576808 1_1:+48288567 Msa0025290:CDS
AGCTGGTCTAAAACATGTTG+AGG 0.579381 1_1:-48286351 None:intergenic
TACACCCGAACAAGTGGTAA+GGG 0.579884 1_1:-48288449 None:intergenic
ACTCATGATCAGAAGGTTGG+AGG 0.581322 1_1:-48288825 None:intergenic
TGTAAAGGTCCACCCGACAA+TGG 0.581837 1_1:-48286684 None:intergenic
AAAGCCACAGACAAAATGTA+GGG 0.582116 1_1:+48287625 Msa0025290:CDS
ACCGCATACATATGCACCAC+CGG 0.582783 1_1:+48287202 Msa0025290:CDS
TTTGGCAGTGCGTATGTCGA+TGG 0.583317 1_1:-48286936 None:intergenic
ACCACCGAAACTTACACCAT+CGG 0.584439 1_1:+48286578 Msa0025290:CDS
TATGTAGGTGTTGGATATGT+CGG 0.584602 1_1:-48287251 None:intergenic
CACCCGAACAAGTGGTAAGG+GGG 0.585944 1_1:-48288447 None:intergenic
TGACCTAAATGATGACGATA+GGG 0.586015 1_1:+48287652 Msa0025290:CDS
TGACTTGTCTGATATGTTGA+GGG 0.587957 1_1:+48287862 Msa0025290:CDS
ACATCATGCATATGCTCCAT+CGG 0.589782 1_1:+48286641 Msa0025290:CDS
GTATGTGCAGTCATCGGCAT+AGG 0.589843 1_1:-48287092 None:intergenic
AAGAGGAGTTCAAACGTGAA+CGG 0.590882 1_1:+48288167 Msa0025290:CDS
CCAGGATTTCAAGGAACACA+AGG 0.592183 1_1:+48287329 Msa0025290:CDS
GCGAGTAGGCCTAGTAGTAG+TGG 0.592919 1_1:-48286424 None:intergenic
GTCGGCGGTGCGGATGTCGA+CGG 0.593551 1_1:-48287233 None:intergenic
TACTACTAGGCCTACTCGCG+AGG 0.593671 1_1:+48286428 Msa0025290:CDS
GGTGGTGCATATGCATGTTG+TGG 0.593870 1_1:-48286561 None:intergenic
TGATGTGAATATGTAGGTGG+TGG 0.594089 1_1:-48286624 None:intergenic
ATACACAGCTGATGAAGTAT+GGG 0.598166 1_1:-48286538 None:intergenic
GTAGGTGGTGGATTCACCGA+TGG 0.598426 1_1:-48286657 None:intergenic
CCACAGACAAAATGTAGGGA+TGG 0.598675 1_1:+48287629 Msa0025290:CDS
GGTAGGTGGAGGTGGAACAT+AGG 0.598829 1_1:-48286853 None:intergenic
AAAGTAGACTCATGATCAGA+AGG 0.598945 1_1:-48288832 None:intergenic
CTGTTGAGCGTACTCGCAAG+TGG 0.599569 1_1:+48286313 Msa0025290:CDS
CGGGTGGACCTTTACACAAG+CGG 0.600983 1_1:+48286691 Msa0025290:CDS
TCTGGAGAACTAGAAACTCC+AGG 0.601740 1_1:-48286777 None:intergenic
GGGGAAAGCCTACAGAAAAG+AGG 0.602123 1_1:+48288016 Msa0025290:CDS
GGAGACTGAGAACGGGTAGG+TGG 0.602886 1_1:-48287149 None:intergenic
AGATGGCATTCATGATGCTG+AGG 0.604447 1_1:+48287412 Msa0025290:CDS
TCAGCGGCATAGGTACAAGC+TGG 0.604900 1_1:-48286368 None:intergenic
CTGACTAAAGATACACAGAC+GGG 0.607010 1_1:+48286387 Msa0025290:CDS
GTATGTGCAGTCGTGGGCAT+AGG 0.609019 1_1:-48286474 None:intergenic
GTAGGTGGTGGATAAATAGG+TGG 0.609496 1_1:-48286612 None:intergenic
GATGGCATTCATGATGCTGA+GGG 0.610481 1_1:+48287413 Msa0025290:CDS
GCTGATGAAGTATGGGTAGG+TGG 0.612690 1_1:-48286531 None:intergenic
GATTGAGAACTGGTAGGTGG+AGG 0.613125 1_1:-48286864 None:intergenic
CATGATCAGAAGGTTGGAGG+CGG 0.613383 1_1:-48288822 None:intergenic
CCTACATATCCACTATCAAG+TGG 0.613583 1_1:+48287266 Msa0025290:CDS
GTTTGTGTATGTGCAGTCAT+CGG 0.614271 1_1:-48287098 None:intergenic
GTCTGTGTATCTTTAGTCAG+CGG 0.615011 1_1:-48286384 None:intergenic
AGTCGCTTATATGATGATGC+CGG 0.615837 1_1:+48288490 Msa0025290:CDS
AGCGTCCACCTAGTGATAAG+GGG 0.616167 1_1:+48286988 Msa0025290:CDS
TTGGTGCCGATGATGAATGA+TGG 0.617362 1_1:+48288878 Msa0025290:CDS
AGTCTGTGTATGTGCAGTCG+TGG 0.617498 1_1:-48286481 None:intergenic
GATAGTGGATATGTAGGTGT+TGG 0.619025 1_1:-48287260 None:intergenic
GAAGCACCATCATTCATCAT+CGG 0.619327 1_1:-48288884 None:intergenic
TATGCATGATGTGAATATGT+AGG 0.619505 1_1:-48286630 None:intergenic
ACAGTCTCGCCTATCCAATG+TGG 0.619509 1_1:-48287908 None:intergenic
GATGCTCTTGCATTATCCAA+AGG 0.620366 1_1:-48288547 None:intergenic
ATCTGTGTATGTGCAGTCGT+CGG 0.624063 1_1:-48286816 None:intergenic
TAAGGATACTCAGATCATGA+AGG 0.624522 1_1:+48288196 Msa0025290:CDS
GATGAAGTATGGGTAGGTGG+AGG 0.627193 1_1:-48286528 None:intergenic
TACCACTAGTCATTCTAGCA+AGG 0.630639 1_1:+48286749 Msa0025290:CDS
ACACCCGAACAAGTGGTAAG+GGG 0.633338 1_1:-48288448 None:intergenic
AGAGCATCGTTAGCCTGTAG+TGG 0.637169 1_1:+48288562 Msa0025290:CDS
GCGAGAACGACCATTAGTAG+TGG 0.637821 1_1:-48287024 None:intergenic
CAGTCTCGCCTATCCAATGT+GGG 0.638006 1_1:-48287907 None:intergenic
AAACATGGCATCAAAGAAAG+GGG 0.640330 1_1:+48287997 Msa0025290:CDS
TCTTGACCAGCCTGATAAGG+CGG 0.640440 1_1:-48287392 None:intergenic
CTAACCCACCCAATGATAAG+GGG 0.640535 1_1:+48286259 Msa0025290:CDS
CCCGACAATGGATTTGTAGG+TGG 0.641838 1_1:-48286672 None:intergenic
TATAGACTAAGAAGTCCAAG+AGG 0.643321 1_1:+48288150 Msa0025290:intron
TCACTAACAAAATTACAAGA+CGG 0.643632 1_1:-48290405 None:intergenic
TTGCGAGTACGCTCAACAGT+AGG 0.645839 1_1:-48286309 None:intergenic
GATGGAGATTGAGAACTGGT+AGG 0.646075 1_1:-48286870 None:intergenic
TACCTTGCTAGAATGACTAG+TGG 0.646973 1_1:-48286751 None:intergenic
TTAAGGGTCAGTGCCCACAT+TGG 0.648200 1_1:+48287894 Msa0025290:CDS
CCCTTCCCCTTACCACTGGG+TGG 0.654508 1_1:-48286714 None:intergenic
GTGACTTGTCTGATATGTTG+AGG 0.654751 1_1:+48287861 Msa0025290:CDS
TGCTGAAGAAACGGACAGAG+GGG 0.654920 1_1:+48288698 Msa0025290:CDS
GCTGACTAAAGATACACAGA+CGG 0.660781 1_1:+48286386 Msa0025290:CDS
AATAGCAATGACATTATGTG+AGG 0.662671 1_1:+48290369 Msa0025290:three_prime_UTR
GCGTCCACCTAGTGATAAGG+GGG 0.664476 1_1:+48286989 Msa0025290:CDS
ATCAAGTGGACCTTCACACA+AGG 0.664485 1_1:+48287280 Msa0025290:CDS
ACAGCTGATGAAGTATGGGT+AGG 0.665045 1_1:-48286534 None:intergenic
GTCGACGGTGTATACGCCGG+TGG 0.665297 1_1:-48287218 None:intergenic
TATAGGAGAAGTGTGAGGCG+AGG 0.665947 1_1:+48288350 Msa0025290:intron
ACCCGAACAAGTGGTAAGGG+GGG 0.667715 1_1:-48288446 None:intergenic
TAGATAAACATGTCATCAGG+AGG 0.668522 1_1:+48286234 None:intergenic
AAAGATTATGAATTCGCAGG+GGG 0.672074 1_1:+48288672 Msa0025290:CDS
GGGCAACAACATCCTTAGCA+GGG 0.676632 1_1:-48288426 None:intergenic
GATGTCGACGGTGTATACGC+CGG 0.677914 1_1:-48287221 None:intergenic
TTGGGCATGGAACTAAATTG+TGG 0.681887 1_1:-48287305 None:intergenic
AAGATCCTGTTCGAAAACTG+CGG 0.682275 1_1:+48288641 Msa0025290:CDS
TGCCAGAGAAAAGAGAAACA+TGG 0.684012 1_1:+48287982 Msa0025290:CDS
TGCCGGCAACTACAAGAAAG+GGG 0.684243 1_1:+48288507 Msa0025290:CDS
ATAGGTCAACTGAAAACTAG+CGG 0.685932 1_1:-48287960 None:intergenic
GGTGGCAGTGTGTATCCCGA+TGG 0.687025 1_1:-48286594 None:intergenic
GATGGAGACTGAGAACGGGT+AGG 0.689290 1_1:-48287152 None:intergenic
TTCATTATAGGAGAAGTGTG+AGG 0.694705 1_1:+48288345 Msa0025290:intron
ATTGCTGAAGAAACGGACAG+AGG 0.696753 1_1:+48288696 Msa0025290:CDS
CCTACAAATCCATTGTCGGG+TGG 0.698994 1_1:+48286675 Msa0025290:CDS
AATTGTGGTACCTTGTGTGA+AGG 0.703679 1_1:-48287290 None:intergenic
AAAAGATTATGAATTCGCAG+GGG 0.706642 1_1:+48288671 Msa0025290:CDS
GCATGATGTGAATATGTAGG+TGG 0.708116 1_1:-48286627 None:intergenic
CATATCAGACAAGTCACGCG+AGG 0.709129 1_1:-48287855 None:intergenic
TTACACAAGCGGCCACCCAG+TGG 0.712688 1_1:+48286702 Msa0025290:CDS
ATGGCATTCATGATGCTGAG+GGG 0.723530 1_1:+48287414 Msa0025290:CDS
GTAGGTGTTGGATATGTCGG+CGG 0.725546 1_1:-48287248 None:intergenic
GGTGGTGCATATGTATGCGG+TGG 0.727513 1_1:-48287200 None:intergenic
GCCGGTGGTGCATATGTATG+CGG 0.731075 1_1:-48287203 None:intergenic
TGTTGGATATGTCGGCGGTG+CGG 0.734289 1_1:-48287243 None:intergenic
GGAGGTGGAACATAGGTACG+AGG 0.741556 1_1:-48286846 None:intergenic
GGAGGCGGAGCATATGTACG+AGG 0.748386 1_1:-48286510 None:intergenic
TGACTAAAGATACACAGACG+GGG 0.766798 1_1:+48286388 Msa0025290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATGTTATATAAAAAATAC+AGG + chr1_1:48287772-48287791 Msa0025290:intron 10.0%
!!! TTTGTATTGATTTATTAACA+TGG + chr1_1:48287532-48287551 Msa0025290:intron 15.0%
!!! TAGTTCTTCTTTATTTATTT+TGG + chr1_1:48288087-48288106 Msa0025290:intron 15.0%
!!! AGTTCTTCTTTATTTATTTT+GGG + chr1_1:48288088-48288107 Msa0025290:intron 15.0%
!! GTTTCAAAAAATTATCATTA+TGG + chr1_1:48289413-48289432 Msa0025290:intron 15.0%
!! AAAAGAATTTAAAAAGAGAA+CGG + chr1_1:48289810-48289829 Msa0025290:intron 15.0%
!!! ATATACATGTAATGGAAATT+GGG - chr1_1:48286898-48286917 None:intergenic 20.0%
!!! ATATACAAGTAATGGAAATT+GGG - chr1_1:48287180-48287199 None:intergenic 20.0%
!! TTATTAACATGGTATTGTTA+AGG + chr1_1:48287543-48287562 Msa0025290:intron 20.0%
!! AAATAAAGAAGAACTAGTTA+AGG - chr1_1:48288083-48288102 None:intergenic 20.0%
!! TTTGTATGGTTATTCATTAT+AGG + chr1_1:48288333-48288352 Msa0025290:intron 20.0%
!!! TTGTCTTGTTTATGTTTTTT+TGG + chr1_1:48288921-48288940 Msa0025290:intron 20.0%
!!! TGTTTTGAATGTTATACTTA+TGG - chr1_1:48289443-48289462 None:intergenic 20.0%
!! TTAAACAGAAATATGAACTT+AGG + chr1_1:48289556-48289575 Msa0025290:intron 20.0%
!!! AATGAGTTTTTTTAAGTGAT+AGG + chr1_1:48289627-48289646 Msa0025290:intron 20.0%
!!! AATGTTTTTTGTACAACTAA+AGG + chr1_1:48289691-48289710 Msa0025290:intron 20.0%
!! GATATACATGTAATGGAAAT+TGG - chr1_1:48286899-48286918 None:intergenic 25.0%
!! TTTAGTGGATATACATGTAA+TGG - chr1_1:48286906-48286925 None:intergenic 25.0%
!! GATATACAAGTAATGGAAAT+TGG - chr1_1:48287181-48287200 None:intergenic 25.0%
!!! TTGTTATTTGACTCTTTGTA+TGG + chr1_1:48288319-48288338 Msa0025290:intron 25.0%
! AAAAAAGATTATGAATTCGC+AGG + chr1_1:48288669-48288688 Msa0025290:CDS 25.0%
! AAAAAGATTATGAATTCGCA+GGG + chr1_1:48288670-48288689 Msa0025290:CDS 25.0%
!!! TTTCAGGTTTGGTATAATTT+TGG - chr1_1:48289052-48289071 None:intergenic 25.0%
! AAATTATACCAAACCTGAAA+TGG + chr1_1:48289052-48289071 Msa0025290:intron 25.0%
! AATTATACCAAACCTGAAAT+GGG + chr1_1:48289053-48289072 Msa0025290:intron 25.0%
!! GTTAGTTGTGAACATTTTAA+CGG - chr1_1:48289092-48289111 None:intergenic 25.0%
! TTAAAATGTTCACAACTAAC+TGG + chr1_1:48289092-48289111 Msa0025290:intron 25.0%
! AATGACAATAATTAGATGTC+AGG - chr1_1:48289141-48289160 None:intergenic 25.0%
! TTGAATGTTATACTTATGGA+TGG - chr1_1:48289439-48289458 None:intergenic 25.0%
!!! TAGTTTTGTTTATGTGAAGT+AGG - chr1_1:48289657-48289676 None:intergenic 25.0%
!! ATAGAAGTTTAAAGTAGCTT+TGG - chr1_1:48289760-48289779 None:intergenic 25.0%
! AACTTCTATTCTCTGATTAA+TGG + chr1_1:48289771-48289790 Msa0025290:intron 25.0%
! TACAAAATATCGTCAAACAA+CGG - chr1_1:48290260-48290279 None:intergenic 25.0%
! TCTTCAAATTTCATTATGCT+AGG + chr1_1:48290311-48290330 Msa0025290:intron 25.0%
!! TAGGTTTTTGTAAACATGAA+GGG + chr1_1:48290330-48290349 Msa0025290:intron 25.0%
TATGCATGATGTGAATATGT+AGG - chr1_1:48286633-48286652 None:intergenic 30.0%
!!! TCACTTGATAGTGGATATTT+TGG - chr1_1:48286957-48286976 None:intergenic 30.0%
! ATAGGTATAAACTGGTCTAA+AGG - chr1_1:48287077-48287096 None:intergenic 30.0%
TTAGGATGACTAGACTTTAA+TGG - chr1_1:48287359-48287378 None:intergenic 30.0%
TTATTCAACCTTCCACTAAA+GGG + chr1_1:48287465-48287484 Msa0025290:CDS 30.0%
! TTACCTGATTCTTTCTAGAA+TGG - chr1_1:48288244-48288263 None:intergenic 30.0%
CAAAGGAATATTAAGACTCA+TGG - chr1_1:48288533-48288552 None:intergenic 30.0%
CATGAGTCTTAATATTCCTT+TGG + chr1_1:48288531-48288550 Msa0025290:CDS 30.0%
AAAAGATTATGAATTCGCAG+GGG + chr1_1:48288671-48288690 Msa0025290:CDS 30.0%
!! TTATGCCATCATTTTTCAGA+TGG - chr1_1:48289002-48289021 None:intergenic 30.0%
ATTATACCAAACCTGAAATG+GGG + chr1_1:48289054-48289073 Msa0025290:intron 30.0%
AATGTCAATACTATCACTTC+TGG + chr1_1:48289223-48289242 Msa0025290:three_prime_UTR 30.0%
! AGGTTTAAAATATCCCTTTC+TGG - chr1_1:48289287-48289306 None:intergenic 30.0%
! ATTAACTGACCTCTTTTCAA+AGG - chr1_1:48289315-48289334 None:intergenic 30.0%
AGTGACAAAACTGCATTATT+TGG + chr1_1:48289492-48289511 Msa0025290:intron 30.0%
TGTACAACTAAAGGATGATA+AGG + chr1_1:48289700-48289719 Msa0025290:intron 30.0%
!! AGAATGAGTTTGCTGAATAA+TGG + chr1_1:48289870-48289889 Msa0025290:intron 30.0%
TAGACTTGTAGTAAATGCAA+AGG - chr1_1:48289925-48289944 None:intergenic 30.0%
! GAATAACAAGACTTTTGCTT+TGG - chr1_1:48290015-48290034 None:intergenic 30.0%
! CATGAAAGCATGATTAGAAT+CGG - chr1_1:48290037-48290056 None:intergenic 30.0%
ATGCTTTCATGTATTCTTCT+TGG + chr1_1:48290046-48290065 Msa0025290:intron 30.0%
ATACTAACCTACTTTGTGTA+GGG - chr1_1:48290163-48290182 None:intergenic 30.0%
AATACTAACCTACTTTGTGT+AGG - chr1_1:48290164-48290183 None:intergenic 30.0%
CTACTATGTTATAGTGCTAT+AGG + chr1_1:48290223-48290242 Msa0025290:intron 30.0%
! CTAGGTTTTTGTAAACATGA+AGG + chr1_1:48290329-48290348 Msa0025290:intron 30.0%
TCACATAATGTCATTGCTAT+TGG - chr1_1:48290370-48290389 None:intergenic 30.0%
AATAGCAATGACATTATGTG+AGG + chr1_1:48290369-48290388 Msa0025290:three_prime_UTR 30.0%
ACATCTTTCCCCTTATCATT+GGG - chr1_1:48286270-48286289 None:intergenic 35.0%
AACATCTTTCCCCTTATCAT+TGG - chr1_1:48286271-48286290 None:intergenic 35.0%
ATACACAGCTGATGAAGTAT+GGG - chr1_1:48286541-48286560 None:intergenic 35.0%
!! TATGTAGGTGGTGGATAAAT+AGG - chr1_1:48286618-48286637 None:intergenic 35.0%
! TGTAATGGAAATTGGGTAGA+TGG - chr1_1:48286891-48286910 None:intergenic 35.0%
TTTGAAGGTTCACTTGATAG+TGG - chr1_1:48286966-48286985 None:intergenic 35.0%
AAAGTAACTCGAGTAGTTTC+TGG + chr1_1:48287047-48287066 Msa0025290:CDS 35.0%
! AGTAATGGAAATTGGGTAGA+TGG - chr1_1:48287173-48287192 None:intergenic 35.0%
!! TATGTAGGTGTTGGATATGT+CGG - chr1_1:48287254-48287273 None:intergenic 35.0%
GGGATTAACATGTTTGATGA+TGG + chr1_1:48287434-48287453 Msa0025290:CDS 35.0%
GTTATTCAACCTTCCACTAA+AGG + chr1_1:48287464-48287483 Msa0025290:CDS 35.0%
! TGTCTGTGGCTTTTTATGTT+GGG - chr1_1:48287618-48287637 None:intergenic 35.0%
! TTGTCTGTGGCTTTTTATGT+TGG - chr1_1:48287619-48287638 None:intergenic 35.0%
AAAAGCCACAGACAAAATGT+AGG + chr1_1:48287624-48287643 Msa0025290:CDS 35.0%
AAAGCCACAGACAAAATGTA+GGG + chr1_1:48287625-48287644 Msa0025290:CDS 35.0%
! TGACCTAAATGATGACGATA+GGG + chr1_1:48287652-48287671 Msa0025290:CDS 35.0%
CGATAGGGCAAAAAAATTCA+AGG + chr1_1:48287667-48287686 Msa0025290:CDS 35.0%
! AAATACAGGAGAAGTGTACA+TGG + chr1_1:48287786-48287805 Msa0025290:intron 35.0%
! TGACTTGTCTGATATGTTGA+GGG + chr1_1:48287862-48287881 Msa0025290:CDS 35.0%
GACTGTATGGCAAAGTTTAT+TGG + chr1_1:48287925-48287944 Msa0025290:CDS 35.0%
ATAGGTCAACTGAAAACTAG+CGG - chr1_1:48287963-48287982 None:intergenic 35.0%
AGAAACATGGCATCAAAGAA+AGG + chr1_1:48287995-48288014 Msa0025290:CDS 35.0%
GAAACATGGCATCAAAGAAA+GGG + chr1_1:48287996-48288015 Msa0025290:CDS 35.0%
AAACATGGCATCAAAGAAAG+GGG + chr1_1:48287997-48288016 Msa0025290:CDS 35.0%
TATAGACTAAGAAGTCCAAG+AGG + chr1_1:48288150-48288169 Msa0025290:intron 35.0%
TAAGGATACTCAGATCATGA+AGG + chr1_1:48288196-48288215 Msa0025290:CDS 35.0%
! TGACCATTCTAGAAAGAATC+AGG + chr1_1:48288238-48288257 Msa0025290:CDS 35.0%
! TTCATTATAGGAGAAGTGTG+AGG + chr1_1:48288345-48288364 Msa0025290:intron 35.0%
TGTAGAACCTCAACCAAATT+GGG - chr1_1:48288601-48288620 None:intergenic 35.0%
TTGTAGAACCTCAACCAAAT+TGG - chr1_1:48288602-48288621 None:intergenic 35.0%
AAAGATTATGAATTCGCAGG+GGG + chr1_1:48288672-48288691 Msa0025290:CDS 35.0%
ACGTCTGCAAAAAATGAAAG+AGG + chr1_1:48288738-48288757 Msa0025290:CDS 35.0%
AAATTATTCGCTCAAGACCA+TGG + chr1_1:48288790-48288809 Msa0025290:CDS 35.0%
AAAGTAGACTCATGATCAGA+AGG - chr1_1:48288835-48288854 None:intergenic 35.0%
TTCTGATCATGAGTCTACTT+TGG + chr1_1:48288834-48288853 Msa0025290:CDS 35.0%
!! ATCATTTTTCAGATGGAAGG+GGG - chr1_1:48288995-48289014 None:intergenic 35.0%
!! CATCATTTTTCAGATGGAAG+GGG - chr1_1:48288996-48289015 None:intergenic 35.0%
!! CCATCATTTTTCAGATGGAA+GGG - chr1_1:48288997-48289016 None:intergenic 35.0%
TTATACCAAACCTGAAATGG+GGG + chr1_1:48289055-48289074 Msa0025290:intron 35.0%
!! CTCAACTCTAAAATCATCTC+AGG + chr1_1:48289179-48289198 Msa0025290:intron 35.0%
AATCATCTCAGGTGTCAAAT+TGG + chr1_1:48289190-48289209 Msa0025290:intron 35.0%
! GTTTTTGTAAACATGAAGGG+TGG + chr1_1:48290333-48290352 Msa0025290:three_prime_UTR 35.0%
AACTAACCCACCCAATGATA+AGG + chr1_1:48286257-48286276 Msa0025290:CDS 40.0%
ACTAACCCACCCAATGATAA+GGG + chr1_1:48286258-48286277 Msa0025290:CDS 40.0%
AACAGTAGGTCTAGTAGTAG+TGG - chr1_1:48286298-48286317 None:intergenic 40.0%
! AGCTGGTCTAAAACATGTTG+AGG - chr1_1:48286354-48286373 None:intergenic 40.0%
GTCTGTGTATCTTTAGTCAG+CGG - chr1_1:48286387-48286406 None:intergenic 40.0%
GCTGACTAAAGATACACAGA+CGG + chr1_1:48286386-48286405 Msa0025290:CDS 40.0%
CTGACTAAAGATACACAGAC+GGG + chr1_1:48286387-48286406 Msa0025290:CDS 40.0%
TGACTAAAGATACACAGACG+GGG + chr1_1:48286388-48286407 Msa0025290:CDS 40.0%
ATGTTGCATCCACTACTACT+AGG + chr1_1:48286286-48286305 Msa0025290:CDS 40.0%
GATACACAGCTGATGAAGTA+TGG - chr1_1:48286542-48286561 None:intergenic 40.0%
TATCCCGATGGTGTAAGTTT+CGG - chr1_1:48286585-48286604 None:intergenic 40.0%
TGATGTGAATATGTAGGTGG+TGG - chr1_1:48286627-48286646 None:intergenic 40.0%
GCATGATGTGAATATGTAGG+TGG - chr1_1:48286630-48286649 None:intergenic 40.0%
ACATCATGCATATGCTCCAT+CGG + chr1_1:48286641-48286660 Msa0025290:CDS 40.0%
ACCACCTACAAATCCATTGT+CGG + chr1_1:48286671-48286690 Msa0025290:CDS 40.0%
GCTAGAATGACTAGTGGTAA+TGG - chr1_1:48286748-48286767 None:intergenic 40.0%
TACCACTAGTCATTCTAGCA+AGG + chr1_1:48286749-48286768 Msa0025290:CDS 40.0%
TACCTTGCTAGAATGACTAG+TGG - chr1_1:48286754-48286773 None:intergenic 40.0%
GATGGTGCATATGCATTTAG+TGG - chr1_1:48286921-48286940 None:intergenic 40.0%
GATATCGCATCCACTACTAA+TGG + chr1_1:48287014-48287033 Msa0025290:CDS 40.0%
TCATCGGCATAGGTATAAAC+TGG - chr1_1:48287085-48287104 None:intergenic 40.0%
GTTTGTGTATGTGCAGTCAT+CGG - chr1_1:48287101-48287120 None:intergenic 40.0%
TGAGTATAGGTATGAGGAGA+TGG - chr1_1:48287125-48287144 None:intergenic 40.0%
TGCGGTGGATATACAAGTAA+TGG - chr1_1:48287188-48287207 None:intergenic 40.0%
!! GATAGTGGATATGTAGGTGT+TGG - chr1_1:48287263-48287282 None:intergenic 40.0%
!! CCACTTGATAGTGGATATGT+AGG - chr1_1:48287269-48287288 None:intergenic 40.0%
CCTACATATCCACTATCAAG+TGG + chr1_1:48287266-48287285 Msa0025290:CDS 40.0%
AATTGTGGTACCTTGTGTGA+AGG - chr1_1:48287293-48287312 None:intergenic 40.0%
TTGGGCATGGAACTAAATTG+TGG - chr1_1:48287308-48287327 None:intergenic 40.0%
CTTGTGTTCCTTGAAATCCT+GGG - chr1_1:48287331-48287350 None:intergenic 40.0%
TTCACAGACTTACCCTTTAG+TGG - chr1_1:48287480-48287499 None:intergenic 40.0%
! GCTGAAATGCTTTTCGTCTT+CGG - chr1_1:48287584-48287603 None:intergenic 40.0%
! GTGACCTAAATGATGACGAT+AGG + chr1_1:48287651-48287670 Msa0025290:CDS 40.0%
TTGCCCTATCGTCATCATTT+AGG - chr1_1:48287658-48287677 None:intergenic 40.0%
! GTGACTTGTCTGATATGTTG+AGG + chr1_1:48287861-48287880 Msa0025290:CDS 40.0%
TTGAGGGAAGTTCGTCTTAA+GGG + chr1_1:48287878-48287897 Msa0025290:CDS 40.0%
GGCAAAGTTTATTGGAGCAT+TGG + chr1_1:48287933-48287952 Msa0025290:CDS 40.0%
! GTTTCTCTTTTCTCTGGCAT+AGG - chr1_1:48287981-48288000 None:intergenic 40.0%
TGCCAGAGAAAAGAGAAACA+TGG + chr1_1:48287982-48288001 Msa0025290:CDS 40.0%
! TGCCATGTTTCTCTTTTCTC+TGG - chr1_1:48287987-48288006 None:intergenic 40.0%
! TGATGGAACCTCTTTTCTGT+AGG - chr1_1:48288027-48288046 None:intergenic 40.0%
AACGCAACACGTAACTCAAA+TGG + chr1_1:48288051-48288070 Msa0025290:CDS 40.0%
AAGAGGAGTTCAAACGTGAA+CGG + chr1_1:48288167-48288186 Msa0025290:CDS 40.0%
ACTCAGATCATGAAGGAAAC+TGG + chr1_1:48288203-48288222 Msa0025290:CDS 40.0%
TATGAGTTGTAACCCTGCTA+AGG + chr1_1:48288414-48288433 Msa0025290:CDS 40.0%
GTGTAGTTGGAGGTAAGAAA+AGG + chr1_1:48288467-48288486 Msa0025290:CDS 40.0%
! AGTCGCTTATATGATGATGC+CGG + chr1_1:48288490-48288509 Msa0025290:CDS 40.0%
GATGCTCTTGCATTATCCAA+AGG - chr1_1:48288550-48288569 None:intergenic 40.0%
AAGATCCTGTTCGAAAACTG+CGG + chr1_1:48288641-48288660 Msa0025290:CDS 40.0%
TAGACTCATGATCAGAAGGT+TGG - chr1_1:48288831-48288850 None:intergenic 40.0%
TGATCATGAGTCTACTTTGG+TGG + chr1_1:48288837-48288856 Msa0025290:CDS 40.0%
GATCATGAGTCTACTTTGGT+GGG + chr1_1:48288838-48288857 Msa0025290:CDS 40.0%
! GAAGCACCATCATTCATCAT+CGG - chr1_1:48288887-48288906 None:intergenic 40.0%
!! TCATTTTTCAGATGGAAGGG+GGG - chr1_1:48288994-48289013 None:intergenic 40.0%
CCCTTCCATCTGAAAAATGA+TGG + chr1_1:48288994-48289013 Msa0025290:intron 40.0%
!! GCCATCATTTTTCAGATGGA+AGG - chr1_1:48288998-48289017 None:intergenic 40.0%
TCAACTGCACTTTACCAGAA+AGG + chr1_1:48289270-48289289 Msa0025290:three_prime_UTR 40.0%
CAACTGCACTTTACCAGAAA+GGG + chr1_1:48289271-48289290 Msa0025290:three_prime_UTR 40.0%
! ACCTCGATTCCTTTGAAAAG+AGG + chr1_1:48289303-48289322 Msa0025290:three_prime_UTR 40.0%
! ACCTCTTTTCAAAGGAATCG+AGG - chr1_1:48289307-48289326 None:intergenic 40.0%
GTGTAGGGTCTGTAAGTTTA+GGG - chr1_1:48290148-48290167 None:intergenic 40.0%
TGTGTAGGGTCTGTAAGTTT+AGG - chr1_1:48290149-48290168 None:intergenic 40.0%
TTACAGACCCTACACAAAGT+AGG + chr1_1:48290153-48290172 Msa0025290:intron 40.0%
CTAACCCACCCAATGATAAG+GGG + chr1_1:48286259-48286278 Msa0025290:CDS 45.0%
CTTTCCCCTTATCATTGGGT+GGG - chr1_1:48286266-48286285 None:intergenic 45.0%
TCTTTCCCCTTATCATTGGG+TGG - chr1_1:48286267-48286286 None:intergenic 45.0%
GTATCTTTAGTCAGCGGCAT+AGG - chr1_1:48286381-48286400 None:intergenic 45.0%
ACAGCTGATGAAGTATGGGT+AGG - chr1_1:48286537-48286556 None:intergenic 45.0%
ACCACCGAAACTTACACCAT+CGG + chr1_1:48286578-48286597 Msa0025290:CDS 45.0%
!! GTAGGTGGTGGATAAATAGG+TGG - chr1_1:48286615-48286634 None:intergenic 45.0%
! GACAATGGATTTGTAGGTGG+TGG - chr1_1:48286672-48286691 None:intergenic 45.0%
CCACCTACAAATCCATTGTC+GGG + chr1_1:48286672-48286691 Msa0025290:CDS 45.0%
CATTCTAGCAAGGTAACTCC+TGG + chr1_1:48286759-48286778 Msa0025290:CDS 45.0%
TCTGGAGAACTAGAAACTCC+AGG - chr1_1:48286780-48286799 None:intergenic 45.0%
GGCACAGGTATAAATTGGTC+TGG - chr1_1:48286798-48286817 None:intergenic 45.0%
TCGTCGGCACAGGTATAAAT+TGG - chr1_1:48286803-48286822 None:intergenic 45.0%
ATCTGTGTATGTGCAGTCGT+CGG - chr1_1:48286819-48286838 None:intergenic 45.0%
GATGGAGATTGAGAACTGGT+AGG - chr1_1:48286873-48286892 None:intergenic 45.0%
GGTAGATGGAGATTGAGAAC+TGG - chr1_1:48286877-48286896 None:intergenic 45.0%
AAGCGTCCACCTAGTGATAA+GGG + chr1_1:48286987-48287006 Msa0025290:CDS 45.0%
ATATCCTCCCCCTTATCACT+AGG - chr1_1:48286999-48287018 None:intergenic 45.0%
TGTGAAGGTCCACTTGATAG+TGG - chr1_1:48287278-48287297 None:intergenic 45.0%
ATCAAGTGGACCTTCACACA+AGG + chr1_1:48287280-48287299 Msa0025290:CDS 45.0%
GTTCCTTGAAATCCTGGGTT+GGG - chr1_1:48287326-48287345 None:intergenic 45.0%
TGTTCCTTGAAATCCTGGGT+TGG - chr1_1:48287327-48287346 None:intergenic 45.0%
CCTTGTGTTCCTTGAAATCC+TGG - chr1_1:48287332-48287351 None:intergenic 45.0%
CCAGGATTTCAAGGAACACA+AGG + chr1_1:48287329-48287348 Msa0025290:CDS 45.0%
AGATGGCATTCATGATGCTG+AGG + chr1_1:48287412-48287431 Msa0025290:CDS 45.0%
GATGGCATTCATGATGCTGA+GGG + chr1_1:48287413-48287432 Msa0025290:CDS 45.0%
ATGGCATTCATGATGCTGAG+GGG + chr1_1:48287414-48287433 Msa0025290:CDS 45.0%
CAGACTTACCCTTTAGTGGA+AGG - chr1_1:48287476-48287495 None:intergenic 45.0%
!! CTTTTCGTCTTCGGCTTTGA+AGG - chr1_1:48287575-48287594 None:intergenic 45.0%
! CCATCCCTACATTTTGTCTG+TGG - chr1_1:48287632-48287651 None:intergenic 45.0%
CCACAGACAAAATGTAGGGA+TGG + chr1_1:48287629-48287648 Msa0025290:CDS 45.0%
GTTGAGGGAAGTTCGTCTTA+AGG + chr1_1:48287877-48287896 Msa0025290:CDS 45.0%
ATTGGATAGGCGAGACTGTA+TGG + chr1_1:48287912-48287931 Msa0025290:CDS 45.0%
TACGTGTTGCGTTGTGTTGA+TGG - chr1_1:48288044-48288063 None:intergenic 45.0%
GTTCACGTTTGAACTCCTCT+TGG - chr1_1:48288168-48288187 None:intergenic 45.0%
AGAGGAGTTCAAACGTGAAC+GGG + chr1_1:48288168-48288187 Msa0025290:CDS 45.0%
! AAACGTGAACGGGCTTCATA+AGG + chr1_1:48288178-48288197 Msa0025290:CDS 45.0%
GCAGGGTTACAACTCATAGA+TGG - chr1_1:48288412-48288431 None:intergenic 45.0%
TACACCCGAACAAGTGGTAA+GGG - chr1_1:48288452-48288471 None:intergenic 45.0%
ATGCCGGCAACTACAAGAAA+GGG + chr1_1:48288506-48288525 Msa0025290:CDS 45.0%
! ATCGTTAGCCTGTAGTGGTA+GGG + chr1_1:48288567-48288586 Msa0025290:CDS 45.0%
! TAGGGAGTTGGTTCCCAATT+TGG + chr1_1:48288585-48288604 Msa0025290:CDS 45.0%
! GTTGGTTCCCAATTTGGTTG+AGG + chr1_1:48288591-48288610 Msa0025290:CDS 45.0%
! AGTTTCCGCAGTTTTCGAAC+AGG - chr1_1:48288649-48288668 None:intergenic 45.0%
AGGGGGAATTGCTGAAGAAA+CGG + chr1_1:48288689-48288708 Msa0025290:CDS 45.0%
ATTGCTGAAGAAACGGACAG+AGG + chr1_1:48288696-48288715 Msa0025290:CDS 45.0%
TTGCTGAAGAAACGGACAGA+GGG + chr1_1:48288697-48288716 Msa0025290:CDS 45.0%
ACTCATGATCAGAAGGTTGG+AGG - chr1_1:48288828-48288847 None:intergenic 45.0%
GGCAATCAAGACGTTGATGT+TGG + chr1_1:48288859-48288878 Msa0025290:CDS 45.0%
!! TTGGTGCCGATGATGAATGA+TGG + chr1_1:48288878-48288897 Msa0025290:CDS 45.0%
ATCTCAGGTGTCAAATTGGC+AGG + chr1_1:48289194-48289213 Msa0025290:intron 45.0%
! TCGTCAAACAACGGCTTTTG+CGG - chr1_1:48290251-48290270 None:intergenic 45.0%
!! TATATAACATAAAATATAAT+AGG - chr1_1:48287764-48287783 None:intergenic 5.0%
TTGCGAGTACGCTCAACAGT+AGG - chr1_1:48286312-48286331 None:intergenic 50.0%
ACTCGAATTTCCTCGCGAGT+AGG - chr1_1:48286441-48286460 None:intergenic 50.0%
GTCTGTGTATGTGCAGTCGT+GGG - chr1_1:48286483-48286502 None:intergenic 50.0%
AGTCTGTGTATGTGCAGTCG+TGG - chr1_1:48286484-48286503 None:intergenic 50.0%
GGAGCATATGTACGAGGAGA+TGG - chr1_1:48286507-48286526 None:intergenic 50.0%
GATGAAGTATGGGTAGGTGG+AGG - chr1_1:48286531-48286550 None:intergenic 50.0%
GCTGATGAAGTATGGGTAGG+TGG - chr1_1:48286534-48286553 None:intergenic 50.0%
GGTGGTGCATATGCATGTTG+TGG - chr1_1:48286564-48286583 None:intergenic 50.0%
CCACCGAAACTTACACCATC+GGG + chr1_1:48286579-48286598 Msa0025290:CDS 50.0%
! CCCGACAATGGATTTGTAGG+TGG - chr1_1:48286675-48286694 None:intergenic 50.0%
! CCACCCGACAATGGATTTGT+AGG - chr1_1:48286678-48286697 None:intergenic 50.0%
CCTACAAATCCATTGTCGGG+TGG + chr1_1:48286675-48286694 Msa0025290:CDS 50.0%
TGTAAAGGTCCACCCGACAA+TGG - chr1_1:48286687-48286706 None:intergenic 50.0%
GGAACATAGGTACGAGGAGA+TGG - chr1_1:48286843-48286862 None:intergenic 50.0%
GATTGAGAACTGGTAGGTGG+AGG - chr1_1:48286867-48286886 None:intergenic 50.0%
GGAGATTGAGAACTGGTAGG+TGG - chr1_1:48286870-48286889 None:intergenic 50.0%
TTTGGCAGTGCGTATGTCGA+TGG - chr1_1:48286939-48286958 None:intergenic 50.0%
CTAGGTGGACGCTTCTTTGA+AGG - chr1_1:48286981-48287000 None:intergenic 50.0%
! GAAGCGTCCACCTAGTGATA+AGG + chr1_1:48286986-48287005 Msa0025290:CDS 50.0%
AGCGTCCACCTAGTGATAAG+GGG + chr1_1:48286988-48287007 Msa0025290:CDS 50.0%
GCGAGAACGACCATTAGTAG+TGG - chr1_1:48287027-48287046 None:intergenic 50.0%
GTATGTGCAGTCATCGGCAT+AGG - chr1_1:48287095-48287114 None:intergenic 50.0%
GGAGGCTGAGTATAGGTATG+AGG - chr1_1:48287131-48287150 None:intergenic 50.0%
GGTAGATGGAGACTGAGAAC+GGG - chr1_1:48287159-48287178 None:intergenic 50.0%
GGGTAGATGGAGACTGAGAA+CGG - chr1_1:48287160-48287179 None:intergenic 50.0%
ACCGCATACATATGCACCAC+CGG + chr1_1:48287202-48287221 Msa0025290:CDS 50.0%
!! GTAGGTGTTGGATATGTCGG+CGG - chr1_1:48287251-48287270 None:intergenic 50.0%
! TTTAGTTCCATGCCCAACCC+AGG + chr1_1:48287311-48287330 Msa0025290:CDS 50.0%
! TTGAAATCCTGGGTTGGGCA+TGG - chr1_1:48287321-48287340 None:intergenic 50.0%
ATGCCCAACCCAGGATTTCA+AGG + chr1_1:48287320-48287339 Msa0025290:CDS 50.0%
TCTTGACCAGCCTGATAAGG+CGG - chr1_1:48287395-48287414 None:intergenic 50.0%
CCATCTTGACCAGCCTGATA+AGG - chr1_1:48287398-48287417 None:intergenic 50.0%
! CCTTATCAGGCTGGTCAAGA+TGG + chr1_1:48287395-48287414 Msa0025290:CDS 50.0%
CATATCAGACAAGTCACGCG+AGG - chr1_1:48287858-48287877 None:intergenic 50.0%
TTAAGGGTCAGTGCCCACAT+TGG + chr1_1:48287894-48287913 Msa0025290:CDS 50.0%
CAGTCTCGCCTATCCAATGT+GGG - chr1_1:48287910-48287929 None:intergenic 50.0%
ACAGTCTCGCCTATCCAATG+TGG - chr1_1:48287911-48287930 None:intergenic 50.0%
GGGGAAAGCCTACAGAAAAG+AGG + chr1_1:48288016-48288035 Msa0025290:CDS 50.0%
! TATAGGAGAAGTGTGAGGCG+AGG + chr1_1:48288350-48288369 Msa0025290:intron 50.0%
GGGCAACAACATCCTTAGCA+GGG - chr1_1:48288429-48288448 None:intergenic 50.0%
ACACCCGAACAAGTGGTAAG+GGG - chr1_1:48288451-48288470 None:intergenic 50.0%
CTACACCCGAACAAGTGGTA+AGG - chr1_1:48288453-48288472 None:intergenic 50.0%
ACCACTTGTTCGGGTGTAGT+TGG + chr1_1:48288454-48288473 Msa0025290:CDS 50.0%
TCCAACTACACCCGAACAAG+TGG - chr1_1:48288458-48288477 None:intergenic 50.0%
ACTTGTTCGGGTGTAGTTGG+AGG + chr1_1:48288457-48288476 Msa0025290:CDS 50.0%
GATGCCGGCAACTACAAGAA+AGG + chr1_1:48288505-48288524 Msa0025290:CDS 50.0%
TGCCGGCAACTACAAGAAAG+GGG + chr1_1:48288507-48288526 Msa0025290:CDS 50.0%
!! AGAGCATCGTTAGCCTGTAG+TGG + chr1_1:48288562-48288581 Msa0025290:CDS 50.0%
! CATCGTTAGCCTGTAGTGGT+AGG + chr1_1:48288566-48288585 Msa0025290:CDS 50.0%
AACCAACTCCCTACCACTAC+AGG - chr1_1:48288578-48288597 None:intergenic 50.0%
TGCTGAAGAAACGGACAGAG+GGG + chr1_1:48288698-48288717 Msa0025290:CDS 50.0%
CATGATCAGAAGGTTGGAGG+CGG - chr1_1:48288825-48288844 None:intergenic 50.0%
!! CTCTTCCCCCATTTCAGGTT+TGG - chr1_1:48289063-48289082 None:intergenic 50.0%
CAAACCTGAAATGGGGGAAG+AGG + chr1_1:48289061-48289080 Msa0025290:intron 50.0%
AGATCCTCTTCCCCCATTTC+AGG - chr1_1:48289068-48289087 None:intergenic 50.0%
GTCTGATGCAGACAGTACAG+CGG - chr1_1:48289524-48289543 None:intergenic 50.0%
TGTCTGCATCAGACATACGC+TGG + chr1_1:48289530-48289549 Msa0025290:intron 50.0%
CTGTTGAGCGTACTCGCAAG+TGG + chr1_1:48286313-48286332 Msa0025290:CDS 55.0%
TCAGCGGCATAGGTACAAGC+TGG - chr1_1:48286371-48286390 None:intergenic 55.0%
GCGAGTAGGCCTAGTAGTAG+TGG - chr1_1:48286427-48286446 None:intergenic 55.0%
TACTACTAGGCCTACTCGCG+AGG + chr1_1:48286428-48286447 Msa0025290:CDS 55.0%
GTATGTGCAGTCGTGGGCAT+AGG - chr1_1:48286477-48286496 None:intergenic 55.0%
GAAGTATGGGTAGGTGGAGG+CGG - chr1_1:48286528-48286547 None:intergenic 55.0%
CCCGATGGTGTAAGTTTCGG+TGG - chr1_1:48286582-48286601 None:intergenic 55.0%
!! GTAGGTGGTGGATTCACCGA+TGG - chr1_1:48286660-48286679 None:intergenic 55.0%
CGGGTGGACCTTTACACAAG+CGG + chr1_1:48286691-48286710 Msa0025290:CDS 55.0%
ACACCCTTCCCCTTACCACT+GGG - chr1_1:48286720-48286739 None:intergenic 55.0%
! AGTGGTAAGGGGAAGGGTGT+CGG + chr1_1:48286720-48286739 Msa0025290:CDS 55.0%
GGAGGTGGAACATAGGTACG+AGG - chr1_1:48286849-48286868 None:intergenic 55.0%
GGTAGGTGGAGGTGGAACAT+AGG - chr1_1:48286856-48286875 None:intergenic 55.0%
TGAGAACTGGTAGGTGGAGG+TGG - chr1_1:48286864-48286883 None:intergenic 55.0%
GCGTCCACCTAGTGATAAGG+GGG + chr1_1:48286989-48287008 Msa0025290:CDS 55.0%
TCCACCTAGTGATAAGGGGG+AGG + chr1_1:48286992-48287011 Msa0025290:CDS 55.0%
TCCTCCCCCTTATCACTAGG+TGG - chr1_1:48286996-48287015 None:intergenic 55.0%
GGTAGGTGGAGGCTGAGTAT+AGG - chr1_1:48287138-48287157 None:intergenic 55.0%
GATGGAGACTGAGAACGGGT+AGG - chr1_1:48287155-48287174 None:intergenic 55.0%
GGTGGTGCATATGTATGCGG+TGG - chr1_1:48287203-48287222 None:intergenic 55.0%
GCCGGTGGTGCATATGTATG+CGG - chr1_1:48287206-48287225 None:intergenic 55.0%
GATGTCGACGGTGTATACGC+CGG - chr1_1:48287224-48287243 None:intergenic 55.0%
TGTTGGATATGTCGGCGGTG+CGG - chr1_1:48287246-48287265 None:intergenic 55.0%
TGATAAGGCGGACGCTGAGA+TGG - chr1_1:48287383-48287402 None:intergenic 55.0%
ATCTCAGCGTCCGCCTTATC+AGG + chr1_1:48287382-48287401 Msa0025290:CDS 55.0%
GGTCAGTGCCCACATTGGAT+AGG + chr1_1:48287899-48287918 Msa0025290:CDS 55.0%
GGGGCAACAACATCCTTAGC+AGG - chr1_1:48288430-48288449 None:intergenic 55.0%
TGCCCCCCTTACCACTTGTT+CGG + chr1_1:48288444-48288463 Msa0025290:CDS 55.0%
ACCCGAACAAGTGGTAAGGG+GGG - chr1_1:48288449-48288468 None:intergenic 55.0%
CACCCGAACAAGTGGTAAGG+GGG - chr1_1:48288450-48288469 None:intergenic 55.0%
GGCCCCTTTCTTGTAGTTGC+CGG - chr1_1:48288512-48288531 None:intergenic 55.0%
AGCCTGTAGTGGTAGGGAGT+TGG + chr1_1:48288573-48288592 Msa0025290:CDS 55.0%
TCGCAAGTGGCGCACTCATC+TGG + chr1_1:48286326-48286345 Msa0025290:CDS 60.0%
GGAGGCGGAGCATATGTACG+AGG - chr1_1:48286513-48286532 None:intergenic 60.0%
GGTGGCAGTGTGTATCCCGA+TGG - chr1_1:48286597-48286616 None:intergenic 60.0%
CTGGGTGGCCGCTTGTGTAA+AGG - chr1_1:48286702-48286721 None:intergenic 60.0%
TTACACAAGCGGCCACCCAG+TGG + chr1_1:48286702-48286721 Msa0025290:CDS 60.0%
AAGCGGCCACCCAGTGGTAA+GGG + chr1_1:48286708-48286727 Msa0025290:CDS 60.0%
CCACCCAGTGGTAAGGGGAA+GGG + chr1_1:48286714-48286733 Msa0025290:CDS 60.0%
GACACCCTTCCCCTTACCAC+TGG - chr1_1:48286721-48286740 None:intergenic 60.0%
GTATGTGCAGTCGTCGGCAC+AGG - chr1_1:48286813-48286832 None:intergenic 60.0%
GACTGAGAACGGGTAGGTGG+AGG - chr1_1:48287149-48287168 None:intergenic 60.0%
GGAGACTGAGAACGGGTAGG+TGG - chr1_1:48287152-48287171 None:intergenic 60.0%
GCCCCCCTTACCACTTGTTC+GGG + chr1_1:48288445-48288464 Msa0025290:CDS 60.0%
GATCAGAAGGTTGGAGGCGG+CGG - chr1_1:48288822-48288841 None:intergenic 60.0%
CAAGCGGCCACCCAGTGGTA+AGG + chr1_1:48286707-48286726 Msa0025290:CDS 65.0%
AGCGGCCACCCAGTGGTAAG+GGG + chr1_1:48286709-48286728 Msa0025290:CDS 65.0%
GCCACCCAGTGGTAAGGGGA+AGG + chr1_1:48286713-48286732 Msa0025290:CDS 65.0%
CCCTTCCCCTTACCACTGGG+TGG - chr1_1:48286717-48286736 None:intergenic 65.0%
GTCGACGGTGTATACGCCGG+TGG - chr1_1:48287221-48287240 None:intergenic 65.0%
GGCGGACGCTGAGATGGCTT+AGG - chr1_1:48287377-48287396 None:intergenic 65.0%
CAGCGTCCGCCTTATCAGGC+TGG + chr1_1:48287386-48287405 Msa0025290:CDS 65.0%
GTCGGCGGTGCGGATGTCGA+CGG - chr1_1:48287236-48287255 None:intergenic 70.0%
GGAGGCGGCGGTGACGTCCA+TGG - chr1_1:48288810-48288829 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 48286243 48290422 48286243 ID=Msa0025290;Name=Msa0025290
chr1_1 mRNA 48286243 48290422 48286243 ID=Msa0025290-mRNA-1;Parent=Msa0025290;Name=Msa0025290-mRNA-1;_AED=0.08;_eAED=0.28;_QI=0|0.83|0.71|1|0.66|0.57|7|201|764
chr1_1 exon 48286243 48287486 48286243 ID=Msa0025290-mRNA-1:exon:13889;Parent=Msa0025290-mRNA-1
chr1_1 exon 48287565 48287688 48287565 ID=Msa0025290-mRNA-1:exon:13890;Parent=Msa0025290-mRNA-1
chr1_1 exon 48287794 48288072 48287794 ID=Msa0025290-mRNA-1:exon:13891;Parent=Msa0025290-mRNA-1
chr1_1 exon 48288155 48288259 48288155 ID=Msa0025290-mRNA-1:exon:13892;Parent=Msa0025290-mRNA-1
chr1_1 exon 48288355 48288899 48288355 ID=Msa0025290-mRNA-1:exon:13893;Parent=Msa0025290-mRNA-1
chr1_1 exon 48289216 48289324 48289216 ID=Msa0025290-mRNA-1:exon:13894;Parent=Msa0025290-mRNA-1
chr1_1 exon 48290333 48290422 48290333 ID=Msa0025290-mRNA-1:exon:13895;Parent=Msa0025290-mRNA-1
chr1_1 CDS 48286243 48287486 48286243 ID=Msa0025290-mRNA-1:cds;Parent=Msa0025290-mRNA-1
chr1_1 CDS 48287565 48287688 48287565 ID=Msa0025290-mRNA-1:cds;Parent=Msa0025290-mRNA-1
chr1_1 CDS 48287794 48288072 48287794 ID=Msa0025290-mRNA-1:cds;Parent=Msa0025290-mRNA-1
chr1_1 CDS 48288155 48288259 48288155 ID=Msa0025290-mRNA-1:cds;Parent=Msa0025290-mRNA-1
chr1_1 CDS 48288355 48288897 48288355 ID=Msa0025290-mRNA-1:cds;Parent=Msa0025290-mRNA-1
chr1_1 three_prime_UTR 48288898 48288899 48288898 ID=Msa0025290-mRNA-1:three_prime_utr;Parent=Msa0025290-mRNA-1
chr1_1 three_prime_UTR 48289216 48289324 48289216 ID=Msa0025290-mRNA-1:three_prime_utr;Parent=Msa0025290-mRNA-1
chr1_1 three_prime_UTR 48290333 48290422 48290333 ID=Msa0025290-mRNA-1:three_prime_utr;Parent=Msa0025290-mRNA-1
Gene Sequence

>Msa0025290

ATGTCATCAGGAGGAACTAACCCACCCAATGATAAGGGGAAAGATGTTGCATCCACTACTACTAGACCTACTGTTGAGCGTACTCGCAAGTGGCGCACTCATCTGGCTCCTCAACATGTTTTAGACCAGCTTGTACCTATGCCGCTGACTAAAGATACACAGACGGGGAAAGATGTTGCATCCACTACTACTAGGCCTACTCGCGAGGAAATTCGAGTAGACAAGTCTATACCTATGCCCACGACTGCACATACACAGACTCCATCTCCTCGTACATATGCTCCGCCTCCACCTACCCATACTTCATCAGCTGTGTATCCACAACATGCATATGCACCACCGAAACTTACACCATCGGGATACACACTGCCACCTATTTATCCACCACCTACATATTCACATCATGCATATGCTCCATCGGTGAATCCACCACCTACAAATCCATTGTCGGGTGGACCTTTACACAAGCGGCCACCCAGTGGTAAGGGGAAGGGTGTCGGATCCATTACCACTAGTCATTCTAGCAAGGTAACTCCTGGAGTTTCTAGTTCTCCAGACCAATTTATACCTGTGCCGACGACTGCACATACACAGATTCCATCTCCTCGTACCTATGTTCCACCTCCACCTACCAGTTCTCAATCTCCATCTACCCAATTTCCATTACATGTATATCCACTAAATGCATATGCACCATCGACATACGCACTGCCAAAATATCCACTATCAAGTGAACCTTCAAAGAAGCGTCCACCTAGTGATAAGGGGGAGGATATCGCATCCACTACTAATGGTCGTTCTCGCAAAGTAACTCGAGTAGTTTCTGGTTCTCCTTTAGACCAGTTTATACCTATGCCGATGACTGCACATACACAAACTCCATCTCCTCATACCTATACTCAGCCTCCACCTACCCGTTCTCAGTCTCCATCTACCCAATTTCCATTACTTGTATATCCACCGCATACATATGCACCACCGGCGTATACACCGTCGACATCCGCACCGCCGACATATCCAACACCTACATATCCACTATCAAGTGGACCTTCACACAAGGTACCACAATTTAGTTCCATGCCCAACCCAGGATTTCAAGGAACACAAGGAACTCCATTAAAGTCTAGTCATCCTAAGCCATCTCAGCGTCCGCCTTATCAGGCTGGTCAAGATGGCATTCATGATGCTGAGGGGATTAACATGTTTGATGATGGAAGACACGTTATTCAACCTTCCACTAAAGGGCTTTTGCCTTCAAAGCCGAAGACGAAAAGCATTTCAGCAAATATACAATCCCAACATAAAAAGCCACAGACAAAATGTAGGGATGGTGACCTAAATGATGACGATAGGGCAAAAAAATTCAAGGAGAAGTGTACATGGCATGACAAGCAGAGTGATCAGATTCAGAATAACTTTCATGTGAGAGCCTCGCGTGACTTGTCTGATATGTTGAGGGAAGTTCGTCTTAAGGGTCAGTGCCCACATTGGATAGGCGAGACTGTATGGCAAAGTTTATTGGAGCATTGGAGTTCCGCTAGTTTTCAGTTGACCTATGCCAGAGAAAAGAGAAACATGGCATCAAAGAAAGGGGAAAGCCTACAGAAAAGAGGTTCCATCAACACAACGCAACACGTAACTCAAATGACTAAGAAGTCCAAGAGGAGTTCAAACGTGAACGGGCTTCATAAGGATACTCAGATCATGAAGGAAACTGGTGATTATGCAGATGACCATTCTAGAAAGAATCAGGAGAAGTGTGAGGCGAGGAAGTCTCAGACTAGATCTCAAAATAATTCAACTTCTCCATCTATGAGTTGTAACCCTGCTAAGGATGTTGTTGCCCCCCTTACCACTTGTTCGGGTGTAGTTGGAGGTAAGAAAAGGAGTCGCTTATATGATGATGCCGGCAACTACAAGAAAGGGGCCATGAGTCTTAATATTCCTTTGGATAATGCAAGAGCATCGTTAGCCTGTAGTGGTAGGGAGTTGGTTCCCAATTTGGTTGAGGTTCTACAAAGAACAGTGACTTCTAGTGAAGATCCTGTTCGAAAACTGCGGAAACTAAAAAAGATTATGAATTCGCAGGGGGAATTGCTGAAGAAACGGACAGAGGGGCTAGAAGAGCTAAAAAAACGTCTGCAAAAAATGAAAGAGGAGCGAGAAGCATTTGAAGAACGTGTGCGAAAATTATTCGCTCAAGACCATGGACGTCACCGCCGCCTCCAACCTTCTGATCATGAGTCTACTTTGGTGGGCAATCAAGACGTTGATGTTGGTGCCGATGATGAATGA
Protein sequence

>Msa0025290

MSSGGTNPPNDKGKDVASTTTRPTVERTRKWRTHLAPQHVLDQLVPMPLTKDTQTGKDVASTTTRPTREEIRVDKSIPMPTTAHTQTPSPRTYAPPPPTHTSSAVYPQHAYAPPKLTPSGYTLPPIYPPPTYSHHAYAPSVNPPPTNPLSGGPLHKRPPSGKGKGVGSITTSHSSKVTPGVSSSPDQFIPVPTTAHTQIPSPRTYVPPPPTSSQSPSTQFPLHVYPLNAYAPSTYALPKYPLSSEPSKKRPPSDKGEDIASTTNGRSRKVTRVVSGSPLDQFIPMPMTAHTQTPSPHTYTQPPPTRSQSPSTQFPLLVYPPHTYAPPAYTPSTSAPPTYPTPTYPLSSGPSHKVPQFSSMPNPGFQGTQGTPLKSSHPKPSQRPPYQAGQDGIHDAEGINMFDDGRHVIQPSTKGLLPSKPKTKSISANIQSQHKKPQTKCRDGDLNDDDRAKKFKEKCTWHDKQSDQIQNNFHVRASRDLSDMLREVRLKGQCPHWIGETVWQSLLEHWSSASFQLTYAREKRNMASKKGESLQKRGSINTTQHVTQMTKKSKRSSNVNGLHKDTQIMKETGDYADDHSRKNQEKCEARKSQTRSQNNSTSPSMSCNPAKDVVAPLTTCSGVVGGKKRSRLYDDAGNYKKGAMSLNIPLDNARASLACSGRELVPNLVEVLQRTVTSSEDPVRKLRKLKKIMNSQGELLKKRTEGLEELKKRLQKMKEEREAFEERVRKLFAQDHGRHRRLQPSDHESTLVGNQDVDVGADDE*