AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1079720


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1079720 MtrunA17_Chr7g0264951 95.679 324 2 1 1 324 1 312 0.0 624
Msa1079720 MtrunA17_Chr2g0328161 60.305 262 89 3 62 321 4 252 3.29e-106 310
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1079720 AT2G21170.3 78.723 329 51 5 1 324 1 315 8.97e-176 489
Msa1079720 AT2G21170.1 78.723 329 51 5 1 324 1 315 8.97e-176 489
Msa1079720 AT2G21170.2 75.988 329 51 6 1 324 1 306 2.92e-164 460
Msa1079720 AT3G55440.1 58.397 262 94 3 62 321 4 252 1.14e-103 304

Find 120 sgRNAs with CRISPR-Local

Find 283 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAGATACAAAGATTGTTAA+AGG 0.210964 7_2:+78917976 Msa1079720:three_prime_UTR
AATTGTCAACTCCAGTTTAT+AGG 0.229210 7_2:+78916671 Msa1079720:CDS
TGACTTGAACAATGCAAAAT+TGG 0.231156 7_2:+78915333 Msa1079720:CDS
TCTAAAACACGTATCATTTA+TGG 0.234291 7_2:+78917090 Msa1079720:CDS
TCTGAGCGAAGGCATGTTAT+TGG 0.246037 7_2:+78916401 Msa1079720:CDS
TAATCAAGCCGTGACTTTCT+TGG 0.251642 7_2:-78917789 None:intergenic
TGTTGGAGGTGCTTCATTAA+AGG 0.252495 7_2:+78917647 Msa1079720:CDS
TTGATTACTTATCGTGGTTT+TGG 0.257618 7_2:+78917805 Msa1079720:exon
GGATGCAAGTGGGTTATTCT+TGG 0.286578 7_2:+78916374 Msa1079720:CDS
CCGCTTTCTTTCCTATAAAC+TGG 0.291585 7_2:-78916682 None:intergenic
AAATATCCGGTCAGAATTCT+TGG 0.308004 7_2:+78916058 Msa1079720:CDS
GATGACGGTACGAGAGGGTT+TGG 0.317108 7_2:-78914414 None:intergenic
ACGTCAATATTAAGAATTCT+TGG 0.321695 7_2:+78918038 Msa1079720:three_prime_UTR
ATGACGGTACGAGAGGGTTT+GGG 0.322557 7_2:-78914413 None:intergenic
CTGCATAGGCCTTCAATTGC+TGG 0.325480 7_2:-78916796 None:intergenic
GATGCAAGTGGGTTATTCTT+GGG 0.345594 7_2:+78916375 Msa1079720:CDS
ATTGCAAAGAAAATAATAAT+AGG 0.349499 7_2:-78917895 None:intergenic
AGTTCTTTGTTGGTGGCAAT+TGG 0.368606 7_2:+78914572 Msa1079720:intron
GCCATGGAAGATTGTGGGTT+TGG 0.379251 7_2:-78914254 None:intergenic
AGAGATGGATAAACGAAGAT+TGG 0.387212 7_2:-78914387 None:intergenic
GGTAAGGTAAAGTGCAGTTC+TGG 0.390696 7_2:-78914222 None:intergenic
GCAAAGAAAGAAGATATTGA+TGG 0.391002 7_2:+78917618 Msa1079720:CDS
TTGGCAATATGAGAGCATTA+AGG 0.391100 7_2:+78917824 Msa1079720:three_prime_UTR
GATATTGATGGATTTCTTGT+TGG 0.407903 7_2:+78917630 Msa1079720:CDS
TTATGGTTTCAGTTCTTTGT+TGG 0.414530 7_2:+78914562 Msa1079720:intron
GTGCTTTCACCGGAGAAATC+AGG 0.416619 7_2:+78916094 Msa1079720:CDS
GGCCTCTCCCGAGCAAGCTC+AGG 0.424736 7_2:+78917011 Msa1079720:CDS
GTGTACTTCCTGAGCTTGCT+CGG 0.427966 7_2:-78917019 None:intergenic
TTGTTGGAAGAAAGGGAAGC+TGG 0.431970 7_2:+78916752 Msa1079720:CDS
GACGGAGGCCAATGGAGAGC+TGG 0.433199 7_2:-78914301 None:intergenic
TACAGATGCGGTGCCTAGTT+GGG 0.435148 7_2:+78916936 Msa1079720:intron
TGGTTTCAGTTCTTTGTTGG+TGG 0.435715 7_2:+78914565 Msa1079720:intron
GAAGTGAAAGAATCGAGCTT+GGG 0.441961 7_2:-78914335 None:intergenic
CCGGTCCCGATGGCCCATAC+AGG 0.444352 7_2:-78916982 None:intergenic
TGTCTGTTTCCAGCAATTGA+AGG 0.447348 7_2:+78916787 Msa1079720:CDS
CTCGTTTCCCAGCTCTCCAT+TGG 0.447775 7_2:+78914293 Msa1079720:CDS
GTCATCGCCATGGCTGGCTC+TGG 0.454308 7_2:+78914431 Msa1079720:CDS
GGGATGAATGGCATCGAAGA+AGG 0.461832 7_2:-78914366 None:intergenic
CGTACCGTCATCGCCATGGC+TGG 0.462222 7_2:+78914425 Msa1079720:CDS
TGGTGAATTGTTGGAAGAAA+GGG 0.464245 7_2:+78916745 Msa1079720:CDS
CAGAATTCTTGGGTGGGAAA+AGG 0.465833 7_2:+78916069 Msa1079720:CDS
CCTGTATGGGCCATCGGGAC+CGG 0.467272 7_2:+78916982 Msa1079720:CDS
GTACAGATGCGGTGCCTAGT+TGG 0.467853 7_2:+78916935 Msa1079720:intron
CCCCTTTGTGTACATCGATC+AGG 0.468432 7_2:+78916008 Msa1079720:CDS
GAATATGTCTTACCAACATC+AGG 0.471944 7_2:-78915358 None:intergenic
GAGATGGATAAACGAAGATT+GGG 0.473915 7_2:-78914386 None:intergenic
ACCTGATCGATGTACACAAA+GGG 0.478299 7_2:-78916009 None:intergenic
TGCATGCATTGGTGAATTGT+TGG 0.479538 7_2:+78916736 Msa1079720:CDS
GTGGAACAACTGAAAGATCT+TGG 0.480624 7_2:+78916353 Msa1079720:CDS
AATATCCGGTCAGAATTCTT+GGG 0.484125 7_2:+78916059 Msa1079720:CDS
TACACATAGCTCTTCGAGAC+TGG 0.484278 7_2:+78917037 Msa1079720:CDS
ATGAACCTGTATGGGCCATC+GGG 0.485213 7_2:+78916977 Msa1079720:CDS
TTATTGCATATGAACCTGTA+TGG 0.487338 7_2:+78916968 Msa1079720:CDS
CGCCATGGCTGGCTCTGGCA+AGG 0.492755 7_2:+78914436 Msa1079720:CDS
TTACCGCCATGGAAGATTGT+GGG 0.496285 7_2:-78914259 None:intergenic
GGTTTGGAAGGAACGAGGTA+AGG 0.496648 7_2:-78914238 None:intergenic
TGAAAGATCTTGGATGCAAG+TGG 0.497418 7_2:+78916363 Msa1079720:CDS
TATGCTTTGAGCGAGGGTCT+CGG 0.500937 7_2:+78916707 Msa1079720:CDS
GGGATGGCGACGGAGGCCAA+TGG 0.501472 7_2:-78914309 None:intergenic
TGGAAGATTGTGGGTTTGGA+AGG 0.502550 7_2:-78914250 None:intergenic
CAGCAATTGAAGGCCTATGC+AGG 0.506980 7_2:+78916797 Msa1079720:CDS
TTCCTGAGCTTGCTCGGGAG+AGG 0.508456 7_2:-78917013 None:intergenic
TTGACAATGGTGGCAAACTC+AGG 0.509945 7_2:-78917755 None:intergenic
GGCCATCGGGACCGGAAAAG+TGG 0.512603 7_2:+78916990 Msa1079720:CDS
GGCATCGAAGAAGGGGTTGG+TGG 0.519371 7_2:-78914357 None:intergenic
TGTACTTCCTGAGCTTGCTC+GGG 0.520288 7_2:-78917018 None:intergenic
TGTTGGAAGAAAGGGAAGCT+GGG 0.521636 7_2:+78916753 Msa1079720:CDS
TTGGTGAATTGTTGGAAGAA+AGG 0.522526 7_2:+78916744 Msa1079720:CDS
TAAACGAAGATTGGGATGAA+TGG 0.523912 7_2:-78914378 None:intergenic
ACGGAGGCCAATGGAGAGCT+GGG 0.525915 7_2:-78914300 None:intergenic
ATTGATGGATTTCTTGTTGG+AGG 0.527183 7_2:+78917633 Msa1079720:CDS
GTCAGAGATAAGCTTACTGA+TGG 0.533116 7_2:-78915314 None:intergenic
GGATGAATGGCATCGAAGAA+GGG 0.533933 7_2:-78914365 None:intergenic
TGACGGTACGAGAGGGTTTG+GGG 0.534526 7_2:-78914412 None:intergenic
GGAAAAGGTGGTGCTTTCAC+CGG 0.541449 7_2:+78916084 Msa1079720:CDS
GAAAGCTAACCTGATTTCTC+CGG 0.542426 7_2:-78916103 None:intergenic
TATGAACCTGTATGGGCCAT+CGG 0.543053 7_2:+78916976 Msa1079720:CDS
CTCGGAGTGATTGCATGCAT+TGG 0.543278 7_2:+78916725 Msa1079720:CDS
GGAAGTGAAAGAATCGAGCT+TGG 0.547796 7_2:-78914336 None:intergenic
AGAGCCAGCCATGGCGATGA+CGG 0.550020 7_2:-78914429 None:intergenic
ACAGACAGGATTGAAATATC+CGG 0.550443 7_2:+78916045 Msa1079720:CDS
GTTACCGCCATGGAAGATTG+TGG 0.551882 7_2:-78914260 None:intergenic
CTCTCGTACCGTCATCGCCA+TGG 0.561027 7_2:+78914421 Msa1079720:CDS
TCCCACCCAAGAATTCTGAC+CGG 0.563968 7_2:-78916064 None:intergenic
TTCTTGGGCATTCTGAGCGA+AGG 0.566062 7_2:+78916390 Msa1079720:CDS
GCAAAATTGGAGCCTGATGT+TGG 0.566546 7_2:+78915346 Msa1079720:CDS
CACGGCTTGATTACTTATCG+TGG 0.572847 7_2:+78917799 Msa1079720:exon
GACCTTGCCAGAGCCAGCCA+TGG 0.575299 7_2:-78914438 None:intergenic
AATTCTTGGGTGGGAAAAGG+TGG 0.576484 7_2:+78916072 Msa1079720:CDS
TGATGCCAATTGCCAACACA+AGG 0.579698 7_2:-78918071 None:intergenic
CACCTGATCGATGTACACAA+AGG 0.585775 7_2:-78916010 None:intergenic
AATGGCATCGAAGAAGGGGT+TGG 0.593662 7_2:-78914360 None:intergenic
TCCAAACCCACAATCTTCCA+TGG 0.594378 7_2:+78914253 Msa1079720:exon
TTGTGGGTTTGGAAGGAACG+AGG 0.600951 7_2:-78914243 None:intergenic
AAGTGAAAGAATCGAGCTTG+GGG 0.603718 7_2:-78914334 None:intergenic
GCGGCATATGCTTTGAGCGA+GGG 0.604230 7_2:+78916701 Msa1079720:CDS
TGATGTTGAAGTTACCGCCA+TGG 0.608620 7_2:-78914270 None:intergenic
TCATGTGTACTATAACAGCC+TGG 0.611276 7_2:+78917862 Msa1079720:three_prime_UTR
ATAATAGGATCGTCAAGACC+AGG 0.611962 7_2:-78917880 None:intergenic
ATCCGGTCAGAATTCTTGGG+TGG 0.615146 7_2:+78916062 Msa1079720:CDS
TCCGGTCAGAATTCTTGGGT+GGG 0.625238 7_2:+78916063 Msa1079720:CDS
GATGAATGGCATCGAAGAAG+GGG 0.636816 7_2:-78914364 None:intergenic
TATTGCATATGAACCTGTAT+GGG 0.638445 7_2:+78916969 Msa1079720:CDS
AAAACACGTATCATTTATGG+AGG 0.644529 7_2:+78917093 Msa1079720:CDS
GAAAGATCTTGGATGCAAGT+GGG 0.647333 7_2:+78916364 Msa1079720:CDS
CATGGCGATGACGGTACGAG+AGG 0.657035 7_2:-78914420 None:intergenic
CCTGATCGATGTACACAAAG+GGG 0.658667 7_2:-78916008 None:intergenic
GACGGTACGAGAGGGTTTGG+GGG 0.664041 7_2:-78914411 None:intergenic
ATGGCGATGACGGTACGAGA+GGG 0.665276 7_2:-78914419 None:intergenic
AGTCACATCCAAGAAAGTCA+CGG 0.665950 7_2:+78917781 Msa1079720:CDS
CCAGTTTATAGGAAAGAAAG+CGG 0.672349 7_2:+78916682 Msa1079720:CDS
AGCGGCATATGCTTTGAGCG+AGG 0.675407 7_2:+78916700 Msa1079720:CDS
CTGATCGATGTACACAAAGG+GGG 0.676507 7_2:-78916007 None:intergenic
TGATCGATGTACACAAAGGG+GGG 0.680284 7_2:-78916006 None:intergenic
GATGCCAATTGCCAACACAA+GGG 0.707200 7_2:-78918070 None:intergenic
ATAACAATATTATCCCAACT+AGG 0.713833 7_2:-78916949 None:intergenic
TGTGACTGAATTGACAATGG+TGG 0.721603 7_2:-78917765 None:intergenic
GGATGTGACTGAATTGACAA+TGG 0.725611 7_2:-78917768 None:intergenic
AAACCCACAATCTTCCATGG+CGG 0.757950 7_2:+78914256 Msa1079720:exon
AGTGAAAGAATCGAGCTTGG+GGG 0.767353 7_2:-78914333 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTATTTTGAATTGAAAT+GGG - chr7_2:78914501-78914520 None:intergenic 10.0%
!!! AAAATTATTTTGAATTGAAA+TGG - chr7_2:78914502-78914521 None:intergenic 10.0%
!! ATAACAGATATAAATTATAA+TGG - chr7_2:78916915-78916934 None:intergenic 10.0%
!!! TTTTGTAACTTTAATACATT+GGG + chr7_2:78914881-78914900 Msa1079720:intron 15.0%
!! AAATATATTATTATCGATCT+TGG - chr7_2:78915481-78915500 None:intergenic 15.0%
!! AAGATCGATAATAATATATT+TGG + chr7_2:78915480-78915499 Msa1079720:intron 15.0%
!! TCATTAAATTAACTAAGTAT+TGG + chr7_2:78915559-78915578 Msa1079720:intron 15.0%
!!! AAAACATGTAATACTTTTTT+GGG - chr7_2:78915849-78915868 None:intergenic 15.0%
!!! AAAAACATGTAATACTTTTT+TGG - chr7_2:78915850-78915869 None:intergenic 15.0%
!!! AAAAAAGTATTACATGTTTT+TGG + chr7_2:78915849-78915868 Msa1079720:intron 15.0%
!! AAATAACAAATATATCAAAG+AGG - chr7_2:78915935-78915954 None:intergenic 15.0%
!!! TCTTTGATATATTTGTTATT+TGG + chr7_2:78915934-78915953 Msa1079720:intron 15.0%
!!! CAGTTTATATTATTATTTTC+TGG + chr7_2:78916259-78916278 Msa1079720:intron 15.0%
!!! AAATTTAGAAATCATTTTAG+TGG + chr7_2:78916444-78916463 Msa1079720:intron 15.0%
!!! GAAATTATACATTTTTTCTT+TGG - chr7_2:78917357-78917376 None:intergenic 15.0%
!!! ATTTTAACATTACATTAATC+TGG + chr7_2:78917557-78917576 Msa1079720:intron 15.0%
!! ATTGCAAAGAAAATAATAAT+AGG - chr7_2:78917898-78917917 None:intergenic 15.0%
!!! GTTTTGTAACTTTAATACAT+TGG + chr7_2:78914880-78914899 Msa1079720:intron 20.0%
!! TTTGTAACTTTAATACATTG+GGG + chr7_2:78914882-78914901 Msa1079720:intron 20.0%
!! AATGTTTAACATTAAGTATG+TGG + chr7_2:78915878-78915897 Msa1079720:intron 20.0%
!!! AAGCAAAAAGTATATATATC+TGG + chr7_2:78916537-78916556 Msa1079720:intron 20.0%
!!! CAGATATAAATTATAATGGA+TGG - chr7_2:78916911-78916930 None:intergenic 20.0%
!!! TAAATTTTTTACTGTACCTT+TGG + chr7_2:78917116-78917135 Msa1079720:intron 20.0%
!! TAAATTCATGCATCATAAAT+GGG - chr7_2:78917318-78917337 None:intergenic 20.0%
!! TTAAATTCATGCATCATAAA+TGG - chr7_2:78917319-78917338 None:intergenic 20.0%
!!! CTTCATTAAAGGTATATATA+TGG + chr7_2:78917658-78917677 Msa1079720:intron 20.0%
!!! TTATTTTCTTTGCAATCAAT+AGG + chr7_2:78917902-78917921 Msa1079720:three_prime_UTR 20.0%
!!! TTTTTGTTTTTGTGTTTGGT+GGG - chr7_2:78914195-78914214 None:intergenic 25.0%
!!! TTTTTTGTTTTTGTGTTTGG+TGG - chr7_2:78914196-78914215 None:intergenic 25.0%
!!! AGCTTTTTTGTTTTTGTGTT+TGG - chr7_2:78914199-78914218 None:intergenic 25.0%
! AATAGAGGAAAAAACAAAGT+GGG - chr7_2:78914466-78914485 None:intergenic 25.0%
! AAATAGAGGAAAAAACAAAG+TGG - chr7_2:78914467-78914486 None:intergenic 25.0%
!!! TATTTTGCTTGCTTTGTTTA+TGG + chr7_2:78914545-78914564 Msa1079720:intron 25.0%
!! ATTGAAGCAAACAGTTATTT+TGG + chr7_2:78914728-78914747 Msa1079720:intron 25.0%
!!! ATGTTGTTTCTAACTGAAAT+GGG - chr7_2:78915220-78915239 None:intergenic 25.0%
!!! AATGTTGTTTCTAACTGAAA+TGG - chr7_2:78915221-78915240 None:intergenic 25.0%
!!! CATTTTTGTTATCTCTAGAA+TGG + chr7_2:78915280-78915299 Msa1079720:intron 25.0%
!!! CATTTTAGATTTTAGGAGTT+CGG - chr7_2:78915453-78915472 None:intergenic 25.0%
!! CATTTAAAACCATTTGGAAT+TGG - chr7_2:78915533-78915552 None:intergenic 25.0%
!! ATCGAACATTTAAAACCATT+TGG - chr7_2:78915539-78915558 None:intergenic 25.0%
!!! TTTCTTCCTATTTTTTGAAC+TGG - chr7_2:78915602-78915621 None:intergenic 25.0%
!! ATGCAATAATGTTCATTTTC+TGG + chr7_2:78915766-78915785 Msa1079720:intron 25.0%
! TTGATTATACACAATTGAGA+GGG + chr7_2:78915807-78915826 Msa1079720:intron 25.0%
! CAAAGAGGTAATTAAGAAAA+AGG - chr7_2:78915920-78915939 None:intergenic 25.0%
! GTCAAATGATATTTATTGAG+TGG - chr7_2:78916324-78916343 None:intergenic 25.0%
!!! TTTTGCTCATATTTAAGATG+TGG + chr7_2:78916587-78916606 Msa1079720:intron 25.0%
! AAGAAGAAAATACACGTATT+AGG - chr7_2:78916614-78916633 None:intergenic 25.0%
!! GTCATGATCAATTTTCTTTT+GGG + chr7_2:78916835-78916854 Msa1079720:intron 25.0%
!!! ATAAATTATAATGGATGGCA+TGG - chr7_2:78916906-78916925 None:intergenic 25.0%
! ATAACAATATTATCCCAACT+AGG - chr7_2:78916952-78916971 None:intergenic 25.0%
!! TCTAAAACACGTATCATTTA+TGG + chr7_2:78917090-78917109 Msa1079720:CDS 25.0%
! ATTTCTATCAATAAACTGTC+TGG + chr7_2:78917372-78917391 Msa1079720:intron 25.0%
!!! CATTACATTAATCTGGTTTT+AGG + chr7_2:78917564-78917583 Msa1079720:intron 25.0%
! AGAGATACAAAGATTGTTAA+AGG + chr7_2:78917976-78917995 Msa1079720:three_prime_UTR 25.0%
! ACGTCAATATTAAGAATTCT+TGG + chr7_2:78918038-78918057 Msa1079720:three_prime_UTR 25.0%
GGGAATAACACAAAAAATAG+AGG - chr7_2:78914481-78914500 None:intergenic 30.0%
TTATGGTTTCAGTTCTTTGT+TGG + chr7_2:78914562-78914581 Msa1079720:intron 30.0%
TCACACAGTTCTTTACTTAT+TGG + chr7_2:78914616-78914635 Msa1079720:intron 30.0%
! CTCTTTTATTAGCACACTAT+TGG + chr7_2:78914676-78914695 Msa1079720:intron 30.0%
AAAGTAACTGAGGGAAAAAA+AGG - chr7_2:78914773-78914792 None:intergenic 30.0%
ATTCAAAACGAAAGACACAT+TGG - chr7_2:78914801-78914820 None:intergenic 30.0%
TTGTCTTCTGTTAGTCAATT+TGG + chr7_2:78914821-78914840 Msa1079720:intron 30.0%
! GCTTGAGTAAACAGAAATTT+TGG - chr7_2:78914947-78914966 None:intergenic 30.0%
CTGGAAAACTTAAACAAAGA+AGG - chr7_2:78915013-78915032 None:intergenic 30.0%
GTTAATTTACTCAAGCTAAC+TGG - chr7_2:78915032-78915051 None:intergenic 30.0%
TGACTTGAACAATGCAAAAT+TGG + chr7_2:78915333-78915352 Msa1079720:CDS 30.0%
GCTTGTAACTAAAAACACAT+AGG - chr7_2:78915395-78915414 None:intergenic 30.0%
! GGCAGTTCATTTTAGATTTT+AGG - chr7_2:78915460-78915479 None:intergenic 30.0%
AAATGTACTCCAATTCCAAA+TGG + chr7_2:78915521-78915540 Msa1079720:intron 30.0%
TGCAACAGAAAAATACCAAA+GGG - chr7_2:78915729-78915748 None:intergenic 30.0%
GTTGATTATACACAATTGAG+AGG + chr7_2:78915806-78915825 Msa1079720:intron 30.0%
TGATTATACACAATTGAGAG+GGG + chr7_2:78915808-78915827 Msa1079720:intron 30.0%
!!! CTTTTTTGGGACATGATATA+AGG - chr7_2:78915836-78915855 None:intergenic 30.0%
TGAAAAACTCAATTACAGAC+AGG + chr7_2:78916031-78916050 Msa1079720:CDS 30.0%
! AAACACCAAAACTTTTGACA+GGG - chr7_2:78916133-78916152 None:intergenic 30.0%
TAAAGAAACATCAAGAAAGC+AGG - chr7_2:78916231-78916250 None:intergenic 30.0%
TGTTATTGGAGAAAAAGATG+AGG + chr7_2:78916415-78916434 Msa1079720:CDS 30.0%
ATATATATCTGGTCCACATT+TGG + chr7_2:78916548-78916567 Msa1079720:intron 30.0%
AATTGTCAACTCCAGTTTAT+AGG + chr7_2:78916671-78916690 Msa1079720:CDS 30.0%
! CGTCATGATCAATTTTCTTT+TGG + chr7_2:78916834-78916853 Msa1079720:intron 30.0%
ATATCTGTTATGTACAGATG+CGG + chr7_2:78916924-78916943 Msa1079720:intron 30.0%
TTATTGCATATGAACCTGTA+TGG + chr7_2:78916968-78916987 Msa1079720:CDS 30.0%
TATTGCATATGAACCTGTAT+GGG + chr7_2:78916969-78916988 Msa1079720:CDS 30.0%
AAAACACGTATCATTTATGG+AGG + chr7_2:78917093-78917112 Msa1079720:CDS 30.0%
ACAAGTAAAAATGCAACCAA+AGG - chr7_2:78917135-78917154 None:intergenic 30.0%
! TTTGGTTGCATTTTTACTTG+TGG + chr7_2:78917134-78917153 Msa1079720:intron 30.0%
AGGGTAGACAGAAAAATAAT+GGG - chr7_2:78917241-78917260 None:intergenic 30.0%
AAGGGTAGACAGAAAAATAA+TGG - chr7_2:78917242-78917261 None:intergenic 30.0%
!! ACAGAATGCATTTTAGGAAA+GGG - chr7_2:78917260-78917279 None:intergenic 30.0%
!! TACAGAATGCATTTTAGGAA+AGG - chr7_2:78917261-78917280 None:intergenic 30.0%
! GTACATACAGAATGCATTTT+AGG - chr7_2:78917266-78917285 None:intergenic 30.0%
GCAAAGAAAGAAGATATTGA+TGG + chr7_2:78917618-78917637 Msa1079720:CDS 30.0%
!! GATATTGATGGATTTCTTGT+TGG + chr7_2:78917630-78917649 Msa1079720:CDS 30.0%
!! ACTTGTAAGTGATAATGGTA+TGG - chr7_2:78917713-78917732 None:intergenic 30.0%
! TTGATTACTTATCGTGGTTT+TGG + chr7_2:78917805-78917824 Msa1079720:exon 30.0%
!! TCAAAGAACCTGTGTTTTTA+TGG + chr7_2:78917945-78917964 Msa1079720:three_prime_UTR 30.0%
TAAACGAAGATTGGGATGAA+TGG - chr7_2:78914381-78914400 None:intergenic 35.0%
GAGATGGATAAACGAAGATT+GGG - chr7_2:78914389-78914408 None:intergenic 35.0%
AGAGATGGATAAACGAAGAT+TGG - chr7_2:78914390-78914409 None:intergenic 35.0%
TAACTGAGGGAAAAAAAGGT+CGG - chr7_2:78914769-78914788 None:intergenic 35.0%
CTACTAACAAAAGACACACT+CGG + chr7_2:78914853-78914872 Msa1079720:intron 35.0%
TACTAACAAAAGACACACTC+GGG + chr7_2:78914854-78914873 Msa1079720:intron 35.0%
GCTTCATGTCACAAGATAAT+TGG + chr7_2:78914965-78914984 Msa1079720:intron 35.0%
ACAATCTTACGATTCTTACC+AGG + chr7_2:78915068-78915087 Msa1079720:intron 35.0%
AGTGTCTCTGTTAAAAAACC+TGG - chr7_2:78915089-78915108 None:intergenic 35.0%
!!! GAGACACTTGCTTTTTGTTT+TGG + chr7_2:78915101-78915120 Msa1079720:intron 35.0%
GAATATGTCTTACCAACATC+AGG - chr7_2:78915361-78915380 None:intergenic 35.0%
!!! CCTATTTTTTGAACTGGAGT+GGG - chr7_2:78915596-78915615 None:intergenic 35.0%
!!! TCCTATTTTTTGAACTGGAG+TGG - chr7_2:78915597-78915616 None:intergenic 35.0%
AAATGAAAGTAACTACCTCC+AGG + chr7_2:78915621-78915640 Msa1079720:intron 35.0%
TAGGGTCTAGTAAGTTCAAT+GGG - chr7_2:78915696-78915715 None:intergenic 35.0%
GTGCAACAGAAAAATACCAA+AGG - chr7_2:78915730-78915749 None:intergenic 35.0%
!!! TTCATTTTCTGGTTAGCTCA+AGG + chr7_2:78915777-78915796 Msa1079720:intron 35.0%
CATCTGTACTTCTCACAAAA+TGG - chr7_2:78915975-78915994 None:intergenic 35.0%
ACAGACAGGATTGAAATATC+CGG + chr7_2:78916045-78916064 Msa1079720:CDS 35.0%
AAATATCCGGTCAGAATTCT+TGG + chr7_2:78916058-78916077 Msa1079720:CDS 35.0%
AATATCCGGTCAGAATTCTT+GGG + chr7_2:78916059-78916078 Msa1079720:CDS 35.0%
! GAAACACCAAAACTTTTGAC+AGG - chr7_2:78916134-78916153 None:intergenic 35.0%
CAGGCATAACTTTATGCATT+AGG - chr7_2:78916161-78916180 None:intergenic 35.0%
ATGCATAAAGTTATGCCTGT+TGG + chr7_2:78916162-78916181 Msa1079720:intron 35.0%
AGTATATGTAAGCATCCAAC+AGG - chr7_2:78916180-78916199 None:intergenic 35.0%
TGCATAATATATTGTCCCTC+TGG + chr7_2:78916504-78916523 Msa1079720:intron 35.0%
TGCTTGTATTTAAGTCCAGA+GGG - chr7_2:78916522-78916541 None:intergenic 35.0%
TTGCTTGTATTTAAGTCCAG+AGG - chr7_2:78916523-78916542 None:intergenic 35.0%
! GAGCAAAAAGTACATGTATC+TGG - chr7_2:78916575-78916594 None:intergenic 35.0%
CCAGTTTATAGGAAAGAAAG+CGG + chr7_2:78916682-78916701 Msa1079720:CDS 35.0%
TTGGTGAATTGTTGGAAGAA+AGG + chr7_2:78916744-78916763 Msa1079720:CDS 35.0%
TGGTGAATTGTTGGAAGAAA+GGG + chr7_2:78916745-78916764 Msa1079720:CDS 35.0%
! AACATAGTTTTCACCTGCAT+AGG - chr7_2:78916813-78916832 None:intergenic 35.0%
!! CAGAAAAATAATGGGTGCAA+CGG - chr7_2:78917233-78917252 None:intergenic 35.0%
AGTTCATTCCTCATTCTTGT+AGG + chr7_2:78917292-78917311 Msa1079720:intron 35.0%
ACTGTCTGGCATTTGTTTAT+AGG + chr7_2:78917386-78917405 Msa1079720:intron 35.0%
! TGGTTTAAGTTCAGTCTATC+TGG + chr7_2:78917493-78917512 Msa1079720:intron 35.0%
! GGTTTAAGTTCAGTCTATCT+GGG + chr7_2:78917494-78917513 Msa1079720:intron 35.0%
!!! CTGGTTTTAGGATCTGTTAA+TGG + chr7_2:78917576-78917595 Msa1079720:intron 35.0%
!!! GTTTTAGGATCTGTTAATGG+AGG + chr7_2:78917579-78917598 Msa1079720:intron 35.0%
!! ATTGATGGATTTCTTGTTGG+AGG + chr7_2:78917633-78917652 Msa1079720:CDS 35.0%
!! TGATAATGGTATGGTCACTT+TGG - chr7_2:78917704-78917723 None:intergenic 35.0%
!! GATCGACTTGTAAGTGATAA+TGG - chr7_2:78917718-78917737 None:intergenic 35.0%
!! TTGGCAATATGAGAGCATTA+AGG + chr7_2:78917824-78917843 Msa1079720:three_prime_UTR 35.0%
! AGGTTCTTTGAAAAACTGAG+AGG - chr7_2:78917936-78917955 None:intergenic 35.0%
AACTGCTACCATAAAAACAC+AGG - chr7_2:78917956-78917975 None:intergenic 35.0%
!!! GGTTTTATTTTCCCTTGTGT+TGG + chr7_2:78918059-78918078 Msa1079720:three_prime_UTR 35.0%
!!! TTGTTTTTGTGTTTGGTGGG+TGG - chr7_2:78914192-78914211 None:intergenic 40.0%
AAGTGAAAGAATCGAGCTTG+GGG - chr7_2:78914337-78914356 None:intergenic 40.0%
GAAGTGAAAGAATCGAGCTT+GGG - chr7_2:78914338-78914357 None:intergenic 40.0%
AGAGGAAAAAACAAAGTGGG+AGG - chr7_2:78914463-78914482 None:intergenic 40.0%
TGGTTTCAGTTCTTTGTTGG+TGG + chr7_2:78914565-78914584 Msa1079720:intron 40.0%
!! AGTTCTTTGTTGGTGGCAAT+TGG + chr7_2:78914572-78914591 Msa1079720:intron 40.0%
AAGGTCGGTGATTATAGTGA+CGG - chr7_2:78914754-78914773 None:intergenic 40.0%
TTGGAGAGCAAAGTAACTGA+GGG - chr7_2:78914782-78914801 None:intergenic 40.0%
ATTGGAGAGCAAAGTAACTG+AGG - chr7_2:78914783-78914802 None:intergenic 40.0%
ACTAACAAAAGACACACTCG+GGG + chr7_2:78914855-78914874 Msa1079720:intron 40.0%
TGACAATGCGTCACAAATCT+AGG + chr7_2:78914920-78914939 Msa1079720:intron 40.0%
GTCAGAGATAAGCTTACTGA+TGG - chr7_2:78915317-78915336 None:intergenic 40.0%
CCCACTCCAGTTCAAAAAAT+AGG + chr7_2:78915593-78915612 Msa1079720:intron 40.0%
AATGGGTCATGTTGAAAGCA+CGG - chr7_2:78915679-78915698 None:intergenic 40.0%
GTAGGGTCTAGTAAGTTCAA+TGG - chr7_2:78915697-78915716 None:intergenic 40.0%
CCAAAGGGAGAGAAAATGTA+GGG - chr7_2:78915714-78915733 None:intergenic 40.0%
ACCAAAGGGAGAGAAAATGT+AGG - chr7_2:78915715-78915734 None:intergenic 40.0%
ACCTGATCGATGTACACAAA+GGG - chr7_2:78916012-78916031 None:intergenic 40.0%
GAAAGCTAACCTGATTTCTC+CGG - chr7_2:78916106-78916125 None:intergenic 40.0%
! CTCTTCCCTGTCAAAAGTTT+TGG + chr7_2:78916125-78916144 Msa1079720:intron 40.0%
ATCATTTGACTCTTGCAGTG+TGG + chr7_2:78916334-78916353 Msa1079720:intron 40.0%
GTGGAACAACTGAAAGATCT+TGG + chr7_2:78916353-78916372 Msa1079720:CDS 40.0%
TGAAAGATCTTGGATGCAAG+TGG + chr7_2:78916363-78916382 Msa1079720:CDS 40.0%
GAAAGATCTTGGATGCAAGT+GGG + chr7_2:78916364-78916383 Msa1079720:CDS 40.0%
!! GATGCAAGTGGGTTATTCTT+GGG + chr7_2:78916375-78916394 Msa1079720:CDS 40.0%
AGATACTGACCACATTCTCT+AGG - chr7_2:78916474-78916493 None:intergenic 40.0%
TGTGGTCAGTATCTTTGCTA+AGG + chr7_2:78916480-78916499 Msa1079720:intron 40.0%
ACATGTATCTGGTCCAAATG+TGG - chr7_2:78916564-78916583 None:intergenic 40.0%
CCGCTTTCTTTCCTATAAAC+TGG - chr7_2:78916685-78916704 None:intergenic 40.0%
! TGCATGCATTGGTGAATTGT+TGG + chr7_2:78916736-78916755 Msa1079720:CDS 40.0%
TGTCTGTTTCCAGCAATTGA+AGG + chr7_2:78916787-78916806 Msa1079720:CDS 40.0%
TAAATGGGCCTACAAGAATG+AGG - chr7_2:78917303-78917322 None:intergenic 40.0%
TTATGCAATCGACAAGGTCA+GGG - chr7_2:78917470-78917489 None:intergenic 40.0%
TTTATGCAATCGACAAGGTC+AGG - chr7_2:78917471-78917490 None:intergenic 40.0%
CCAACTTTATGCAATCGACA+AGG - chr7_2:78917476-78917495 None:intergenic 40.0%
! CCTTGTCGATTGCATAAAGT+TGG + chr7_2:78917473-78917492 Msa1079720:intron 40.0%
!! TGTTGGAGGTGCTTCATTAA+AGG + chr7_2:78917647-78917666 Msa1079720:CDS 40.0%
TGTGACTGAATTGACAATGG+TGG - chr7_2:78917768-78917787 None:intergenic 40.0%
GGATGTGACTGAATTGACAA+TGG - chr7_2:78917771-78917790 None:intergenic 40.0%
AGTCACATCCAAGAAAGTCA+CGG + chr7_2:78917781-78917800 Msa1079720:CDS 40.0%
TAATCAAGCCGTGACTTTCT+TGG - chr7_2:78917792-78917811 None:intergenic 40.0%
TCATGTGTACTATAACAGCC+TGG + chr7_2:78917862-78917881 Msa1079720:three_prime_UTR 40.0%
ATAATAGGATCGTCAAGACC+AGG - chr7_2:78917883-78917902 None:intergenic 40.0%
!! TTTTTGTGTTTGGTGGGTGG+TGG - chr7_2:78914189-78914208 None:intergenic 45.0%
GGTAAGGTAAAGTGCAGTTC+TGG - chr7_2:78914225-78914244 None:intergenic 45.0%
TGGAAGATTGTGGGTTTGGA+AGG - chr7_2:78914253-78914272 None:intergenic 45.0%
TCCAAACCCACAATCTTCCA+TGG + chr7_2:78914253-78914272 Msa1079720:exon 45.0%
AAACCCACAATCTTCCATGG+CGG + chr7_2:78914256-78914275 Msa1079720:exon 45.0%
TTACCGCCATGGAAGATTGT+GGG - chr7_2:78914262-78914281 None:intergenic 45.0%
TGATGTTGAAGTTACCGCCA+TGG - chr7_2:78914273-78914292 None:intergenic 45.0%
AGTGAAAGAATCGAGCTTGG+GGG - chr7_2:78914336-78914355 None:intergenic 45.0%
GGAAGTGAAAGAATCGAGCT+TGG - chr7_2:78914339-78914358 None:intergenic 45.0%
! GATGAATGGCATCGAAGAAG+GGG - chr7_2:78914367-78914386 None:intergenic 45.0%
! GGATGAATGGCATCGAAGAA+GGG - chr7_2:78914368-78914387 None:intergenic 45.0%
GCAAAATTGGAGCCTGATGT+TGG + chr7_2:78915346-78915365 Msa1079720:CDS 45.0%
TACCTCCAGGATCCATCTAT+GGG + chr7_2:78915634-78915653 Msa1079720:intron 45.0%
! ATGGGTCATGTTGAAAGCAC+GGG - chr7_2:78915678-78915697 None:intergenic 45.0%
! CCCTACATTTTCTCTCCCTT+TGG + chr7_2:78915711-78915730 Msa1079720:intron 45.0%
TTTCTGTTGCACGCACAATG+TGG + chr7_2:78915738-78915757 Msa1079720:intron 45.0%
TGATCGATGTACACAAAGGG+GGG - chr7_2:78916009-78916028 None:intergenic 45.0%
CTGATCGATGTACACAAAGG+GGG - chr7_2:78916010-78916029 None:intergenic 45.0%
CCTGATCGATGTACACAAAG+GGG - chr7_2:78916011-78916030 None:intergenic 45.0%
CACCTGATCGATGTACACAA+AGG - chr7_2:78916013-78916032 None:intergenic 45.0%
CAGAATTCTTGGGTGGGAAA+AGG + chr7_2:78916069-78916088 Msa1079720:CDS 45.0%
AATTCTTGGGTGGGAAAAGG+TGG + chr7_2:78916072-78916091 Msa1079720:CDS 45.0%
!! GGATGCAAGTGGGTTATTCT+TGG + chr7_2:78916374-78916393 Msa1079720:CDS 45.0%
! TCTGAGCGAAGGCATGTTAT+TGG + chr7_2:78916401-78916420 Msa1079720:CDS 45.0%
AGTGGCTTTCCTAGAGAATG+TGG + chr7_2:78916462-78916481 Msa1079720:intron 45.0%
TTGTTGGAAGAAAGGGAAGC+TGG + chr7_2:78916752-78916771 Msa1079720:CDS 45.0%
TGTTGGAAGAAAGGGAAGCT+GGG + chr7_2:78916753-78916772 Msa1079720:CDS 45.0%
AGATCACACGAAGAGAGAGT+AGG + chr7_2:78916859-78916878 Msa1079720:intron 45.0%
TATGAACCTGTATGGGCCAT+CGG + chr7_2:78916976-78916995 Msa1079720:CDS 45.0%
TACACATAGCTCTTCGAGAC+TGG + chr7_2:78917037-78917056 Msa1079720:CDS 45.0%
GAATGAGGAATGAACTCGCT+TGG - chr7_2:78917288-78917307 None:intergenic 45.0%
! ATAGTTTGCACAGCAGCATG+TGG + chr7_2:78917530-78917549 Msa1079720:intron 45.0%
AGTCGATCTTGTTGAGATGC+AGG + chr7_2:78917730-78917749 Msa1079720:intron 45.0%
GTCGATCTTGTTGAGATGCA+GGG + chr7_2:78917731-78917750 Msa1079720:intron 45.0%
TTGACAATGGTGGCAAACTC+AGG - chr7_2:78917758-78917777 None:intergenic 45.0%
CACGGCTTGATTACTTATCG+TGG + chr7_2:78917799-78917818 Msa1079720:exon 45.0%
GGTTTGGAAGGAACGAGGTA+AGG - chr7_2:78914241-78914260 None:intergenic 50.0%
TTGTGGGTTTGGAAGGAACG+AGG - chr7_2:78914246-78914265 None:intergenic 50.0%
GCCATGGAAGATTGTGGGTT+TGG - chr7_2:78914257-78914276 None:intergenic 50.0%
GTTACCGCCATGGAAGATTG+TGG - chr7_2:78914263-78914282 None:intergenic 50.0%
AAAGAATCGAGCTTGGGGGA+GGG - chr7_2:78914332-78914351 None:intergenic 50.0%
! AATGGCATCGAAGAAGGGGT+TGG - chr7_2:78914363-78914382 None:intergenic 50.0%
! GGGATGAATGGCATCGAAGA+AGG - chr7_2:78914369-78914388 None:intergenic 50.0%
ATGACGGTACGAGAGGGTTT+GGG - chr7_2:78914416-78914435 None:intergenic 50.0%
CTACCTCCAGGATCCATCTA+TGG + chr7_2:78915633-78915652 Msa1079720:intron 50.0%
CATGACCCATAGATGGATCC+TGG - chr7_2:78915642-78915661 None:intergenic 50.0%
CTCTGCACATGACCCATAGA+TGG - chr7_2:78915649-78915668 None:intergenic 50.0%
! TGGGTCATGTTGAAAGCACG+GGG - chr7_2:78915677-78915696 None:intergenic 50.0%
CCCCTTTGTGTACATCGATC+AGG + chr7_2:78916008-78916027 Msa1079720:CDS 50.0%
ATCCGGTCAGAATTCTTGGG+TGG + chr7_2:78916062-78916081 Msa1079720:CDS 50.0%
TCCGGTCAGAATTCTTGGGT+GGG + chr7_2:78916063-78916082 Msa1079720:CDS 50.0%
TCCCACCCAAGAATTCTGAC+CGG - chr7_2:78916067-78916086 None:intergenic 50.0%
GGAAAAGGTGGTGCTTTCAC+CGG + chr7_2:78916084-78916103 Msa1079720:CDS 50.0%
GTGCTTTCACCGGAGAAATC+AGG + chr7_2:78916094-78916113 Msa1079720:CDS 50.0%
TTCTTGGGCATTCTGAGCGA+AGG + chr7_2:78916390-78916409 Msa1079720:CDS 50.0%
! TATGCTTTGAGCGAGGGTCT+CGG + chr7_2:78916707-78916726 Msa1079720:CDS 50.0%
CTCGGAGTGATTGCATGCAT+TGG + chr7_2:78916725-78916744 Msa1079720:CDS 50.0%
CTGCATAGGCCTTCAATTGC+TGG - chr7_2:78916799-78916818 None:intergenic 50.0%
CAGCAATTGAAGGCCTATGC+AGG + chr7_2:78916797-78916816 Msa1079720:CDS 50.0%
TACAGATGCGGTGCCTAGTT+GGG + chr7_2:78916936-78916955 Msa1079720:intron 50.0%
ATGAACCTGTATGGGCCATC+GGG + chr7_2:78916977-78916996 Msa1079720:CDS 50.0%
! TGTACTTCCTGAGCTTGCTC+GGG - chr7_2:78917021-78917040 None:intergenic 50.0%
! GTGTACTTCCTGAGCTTGCT+CGG - chr7_2:78917022-78917041 None:intergenic 50.0%
CTCGTTTCCCAGCTCTCCAT+TGG + chr7_2:78914293-78914312 Msa1079720:CDS 55.0%
GAAAGAATCGAGCTTGGGGG+AGG - chr7_2:78914333-78914352 None:intergenic 55.0%
AGAGGGTTTGGGGGAAGAGA+TGG - chr7_2:78914405-78914424 None:intergenic 55.0%
TGACGGTACGAGAGGGTTTG+GGG - chr7_2:78914415-78914434 None:intergenic 55.0%
! GATGACGGTACGAGAGGGTT+TGG - chr7_2:78914417-78914436 None:intergenic 55.0%
! ATGGCGATGACGGTACGAGA+GGG - chr7_2:78914422-78914441 None:intergenic 55.0%
GACCCATAGATGGATCCTGG+AGG - chr7_2:78915639-78915658 None:intergenic 55.0%
! GGGTCATGTTGAAAGCACGG+GGG - chr7_2:78915676-78915695 None:intergenic 55.0%
! AGCGGCATATGCTTTGAGCG+AGG + chr7_2:78916700-78916719 Msa1079720:CDS 55.0%
! GCGGCATATGCTTTGAGCGA+GGG + chr7_2:78916701-78916720 Msa1079720:CDS 55.0%
CACGAAGAGAGAGTAGGCGT+TGG + chr7_2:78916865-78916884 Msa1079720:intron 55.0%
GTACAGATGCGGTGCCTAGT+TGG + chr7_2:78916935-78916954 Msa1079720:intron 55.0%
ACGGAGGCCAATGGAGAGCT+GGG - chr7_2:78914303-78914322 None:intergenic 60.0%
AATCGAGCTTGGGGGAGGGA+TGG - chr7_2:78914328-78914347 None:intergenic 60.0%
! GGCATCGAAGAAGGGGTTGG+TGG - chr7_2:78914360-78914379 None:intergenic 60.0%
GACGGTACGAGAGGGTTTGG+GGG - chr7_2:78914414-78914433 None:intergenic 60.0%
! CATGGCGATGACGGTACGAG+AGG - chr7_2:78914423-78914442 None:intergenic 60.0%
CTCTCGTACCGTCATCGCCA+TGG + chr7_2:78914421-78914440 Msa1079720:CDS 60.0%
AGAGCCAGCCATGGCGATGA+CGG - chr7_2:78914432-78914451 None:intergenic 60.0%
!!! CTCGGGAGAGGCCACTTTTC+CGG - chr7_2:78917004-78917023 None:intergenic 60.0%
! TTCCTGAGCTTGCTCGGGAG+AGG - chr7_2:78917016-78917035 None:intergenic 60.0%
GACGGAGGCCAATGGAGAGC+TGG - chr7_2:78914304-78914323 None:intergenic 65.0%
CGTACCGTCATCGCCATGGC+TGG + chr7_2:78914425-78914444 Msa1079720:CDS 65.0%
! GTCATCGCCATGGCTGGCTC+TGG + chr7_2:78914431-78914450 Msa1079720:CDS 65.0%
GACCTTGCCAGAGCCAGCCA+TGG - chr7_2:78914441-78914460 None:intergenic 65.0%
CCTGTATGGGCCATCGGGAC+CGG + chr7_2:78916982-78917001 Msa1079720:CDS 65.0%
GGCCATCGGGACCGGAAAAG+TGG + chr7_2:78916990-78917009 Msa1079720:CDS 65.0%
!!! GGCCACTTTTCCGGTCCCGA+TGG - chr7_2:78916995-78917014 None:intergenic 65.0%
GGGATGGCGACGGAGGCCAA+TGG - chr7_2:78914312-78914331 None:intergenic 70.0%
GCTTGGGGGAGGGATGGCGA+CGG - chr7_2:78914322-78914341 None:intergenic 70.0%
!! CGCCATGGCTGGCTCTGGCA+AGG + chr7_2:78914436-78914455 Msa1079720:CDS 70.0%
CCGGTCCCGATGGCCCATAC+AGG - chr7_2:78916985-78917004 None:intergenic 70.0%
GGCCTCTCCCGAGCAAGCTC+AGG + chr7_2:78917011-78917030 Msa1079720:CDS 70.0%
TGGGGGAGGGATGGCGACGG+AGG - chr7_2:78914319-78914338 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 78914182 78918088 78914182 ID=Msa1079720;Name=Msa1079720
chr7_2 mRNA 78914182 78918088 78914182 ID=Msa1079720-mRNA-1;Parent=Msa1079720;Name=Msa1079720-mRNA-1;_AED=0.06;_eAED=0.06;_QI=90|0.87|0.88|1|1|1|9|280|324
chr7_2 exon 78914182 78914457 78914182 ID=Msa1079720-mRNA-1:exon:19730;Parent=Msa1079720-mRNA-1
chr7_2 exon 78914574 78914600 78914574 ID=Msa1079720-mRNA-1:exon:19731;Parent=Msa1079720-mRNA-1
chr7_2 exon 78915298 78915367 78915298 ID=Msa1079720-mRNA-1:exon:19732;Parent=Msa1079720-mRNA-1
chr7_2 exon 78915992 78916115 78915992 ID=Msa1079720-mRNA-1:exon:19733;Parent=Msa1079720-mRNA-1
chr7_2 exon 78916352 78916436 78916352 ID=Msa1079720-mRNA-1:exon:19734;Parent=Msa1079720-mRNA-1
chr7_2 exon 78916650 78916818 78916650 ID=Msa1079720-mRNA-1:exon:19735;Parent=Msa1079720-mRNA-1
chr7_2 exon 78916941 78917114 78916941 ID=Msa1079720-mRNA-1:exon:19736;Parent=Msa1079720-mRNA-1
chr7_2 exon 78917586 78917668 78917586 ID=Msa1079720-mRNA-1:exon:19737;Parent=Msa1079720-mRNA-1
chr7_2 exon 78917752 78918088 78917752 ID=Msa1079720-mRNA-1:exon:19738;Parent=Msa1079720-mRNA-1
chr7_2 five_prime_UTR 78914182 78914271 78914182 ID=Msa1079720-mRNA-1:five_prime_utr;Parent=Msa1079720-mRNA-1
chr7_2 CDS 78914272 78914457 78914272 ID=Msa1079720-mRNA-1:cds;Parent=Msa1079720-mRNA-1
chr7_2 CDS 78914574 78914600 78914574 ID=Msa1079720-mRNA-1:cds;Parent=Msa1079720-mRNA-1
chr7_2 CDS 78915298 78915367 78915298 ID=Msa1079720-mRNA-1:cds;Parent=Msa1079720-mRNA-1
chr7_2 CDS 78915992 78916115 78915992 ID=Msa1079720-mRNA-1:cds;Parent=Msa1079720-mRNA-1
chr7_2 CDS 78916352 78916436 78916352 ID=Msa1079720-mRNA-1:cds;Parent=Msa1079720-mRNA-1
chr7_2 CDS 78916650 78916818 78916650 ID=Msa1079720-mRNA-1:cds;Parent=Msa1079720-mRNA-1
chr7_2 CDS 78916941 78917114 78916941 ID=Msa1079720-mRNA-1:cds;Parent=Msa1079720-mRNA-1
chr7_2 CDS 78917586 78917668 78917586 ID=Msa1079720-mRNA-1:cds;Parent=Msa1079720-mRNA-1
chr7_2 CDS 78917752 78917808 78917752 ID=Msa1079720-mRNA-1:cds;Parent=Msa1079720-mRNA-1
chr7_2 three_prime_UTR 78917809 78918088 78917809 ID=Msa1079720-mRNA-1:three_prime_utr;Parent=Msa1079720-mRNA-1
Gene Sequence

>Msa1079720

ATGGCGGTAACTTCAACATCACTCGTTTCCCAGCTCTCCATTGGCCTCCGTCGCCATCCCTCCCCCAAGCTCGATTCTTTCACTTCCACCAACCCCTTCTTCGATGCCATTCATCCCAATCTTCGTTTATCCATCTCTTCCCCCAAACCCTCTCGTACCGTCATCGCCATGGCTGGCTCTGGCAAGTTCTTTGTTGGTGGCAATTGGAAATGTAATGGAACAAAAGACTCCATCAGTAAGCTTATCTCTGACTTGAACAATGCAAAATTGGAGCCTGATGTTGATGTCGTTGTTGCACCCCCCTTTGTGTACATCGATCAGGTGAAAAACTCAATTACAGACAGGATTGAAATATCCGGTCAGAATTCTTGGGTGGGAAAAGGTGGTGCTTTCACCGGAGAAATCAGTGTGGAACAACTGAAAGATCTTGGATGCAAGTGGGTTATTCTTGGGCATTCTGAGCGAAGGCATGTTATTGGAGAAAAAGATGAGAGTAGTAAGATAATAGCTGAAAATTGTCAACTCCAGTTTATAGGAAAGAAAGCGGCATATGCTTTGAGCGAGGGTCTCGGAGTGATTGCATGCATTGGTGAATTGTTGGAAGAAAGGGAAGCTGGGAAAACTTTTGATGTCTGTTTCCAGCAATTGAAGGCCTATGCAGATGCGGTGCCTAGTTGGGATAATATTGTTATTGCATATGAACCTGTATGGGCCATCGGGACCGGAAAAGTGGCCTCTCCCGAGCAAGCTCAGGAAGTACACATAGCTCTTCGAGACTGGCTTAAAAATAACGTCTCAGCTGAAGTCGCATCTAAAACACGTATCATTTATGGAGGATCTGTTAATGGAGGCAACAGTGCTGATCTTGCAAAGAAAGAAGATATTGATGGATTTCTTGTTGGAGGTGCTTCATTAAAGGGTCCTGAGTTTGCCACCATTGTCAATTCAGTCACATCCAAGAAAGTCACGGCTTGA

Protein sequence

>Msa1079720

MAVTSTSLVSQLSIGLRRHPSPKLDSFTSTNPFFDAIHPNLRLSISSPKPSRTVIAMAGSGKFFVGGNWKCNGTKDSISKLISDLNNAKLEPDVDVVVAPPFVYIDQVKNSITDRIEISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDESSKIIAENCQLQFIGKKAAYALSEGLGVIACIGELLEEREAGKTFDVCFQQLKAYADAVPSWDNIVIAYEPVWAIGTGKVASPEQAQEVHIALRDWLKNNVSAEVASKTRIIYGGSVNGGNSADLAKKEDIDGFLVGGASLKGPEFATIVNSVTSKKVTA*