Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0072600 | A0A396JS83 | 84.211 | 893 | 97 | 7 | 37 | 900 | 1 | 878 | 0.0 | 1389 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001550 | Msa0072600 | 0.809131 | 2.202059e-50 | -8.615850e-47 |
Msa0025070 | Msa0072600 | 0.908053 | 2.600586e-81 | -8.615850e-47 |
Msa0025290 | Msa0072600 | 0.919565 | 3.840141e-87 | -8.615850e-47 |
Msa0035050 | Msa0072600 | 0.857094 | 2.062414e-62 | -8.615850e-47 |
Msa0037780 | Msa0072600 | 0.817718 | 2.851857e-52 | -8.615850e-47 |
Msa0051960 | Msa0072600 | -0.815928 | 7.189808e-52 | -8.615850e-47 |
Msa0060710 | Msa0072600 | 0.831184 | 1.927583e-55 | -8.615850e-47 |
Msa0072600 | Msa0077370 | -0.818457 | 1.940700e-52 | -8.615850e-47 |
Msa0072600 | Msa0081440 | 0.829894 | 3.987972e-55 | -8.615850e-47 |
Msa0072600 | Msa0082230 | -0.812170 | 4.851207e-51 | -8.615850e-47 |
Msa0072600 | Msa0093950 | 0.833099 | 6.478124e-56 | -8.615850e-47 |
Msa0072600 | Msa0101960 | -0.817432 | 3.307044e-52 | -8.615850e-47 |
Msa0072600 | Msa0112880 | 0.809834 | 1.555809e-50 | -8.615850e-47 |
Msa0072600 | Msa0113370 | 0.804625 | 1.974488e-49 | -8.615850e-47 |
Msa0072600 | Msa0136870 | 0.813178 | 2.919141e-51 | -8.615850e-47 |
Msa0072600 | Msa0138680 | 0.827871 | 1.231385e-54 | -8.615850e-47 |
Msa0072600 | Msa0174100 | -0.836895 | 7.155533e-57 | -8.615850e-47 |
Msa0072600 | Msa0178840 | 0.827186 | 1.797430e-54 | -8.615850e-47 |
Msa0072600 | Msa0187590 | 0.805715 | 1.167937e-49 | -8.615850e-47 |
Msa0072600 | Msa0211590 | 0.804182 | 2.442609e-49 | -8.615850e-47 |
Msa0072600 | Msa0220400 | 0.817929 | 2.554827e-52 | -8.615850e-47 |
Msa0072600 | Msa0237690 | 0.820480 | 6.707033e-53 | -8.615850e-47 |
Msa0072600 | Msa0275250 | 0.815077 | 1.112042e-51 | -8.615850e-47 |
Msa0072600 | Msa0299530 | 0.823416 | 1.401915e-53 | -8.615850e-47 |
Msa0072600 | Msa0310730 | 0.812336 | 4.462376e-51 | -8.615850e-47 |
Msa0072600 | Msa0326630 | 0.816570 | 5.164985e-52 | -8.615850e-47 |
Msa0072600 | Msa0327990 | 0.820600 | 6.297199e-53 | -8.615850e-47 |
Msa0072600 | Msa0367540 | 0.855488 | 6.101935e-62 | -8.615850e-47 |
Msa0072600 | Msa0370580 | 0.824686 | 7.057077e-54 | -8.615850e-47 |
Msa0072600 | Msa0372570 | 0.830547 | 2.762419e-55 | -8.615850e-47 |
Msa0072600 | Msa0374300 | 0.837991 | 3.748027e-57 | -8.615850e-47 |
Msa0072600 | Msa0374340 | 0.847398 | 1.186385e-59 | -8.615850e-47 |
Msa0072600 | Msa0374420 | 0.851294 | 9.749021e-61 | -8.615850e-47 |
Msa0072600 | Msa0380270 | 0.818027 | 2.428318e-52 | -8.615850e-47 |
Msa0072600 | Msa0383870 | 0.876209 | 1.674977e-68 | -8.615850e-47 |
Msa0072600 | Msa0388080 | 0.807267 | 5.495140e-50 | -8.615850e-47 |
Msa0072600 | Msa0397420 | 0.811735 | 6.034604e-51 | -8.615850e-47 |
Msa0072600 | Msa0403470 | 0.857579 | 1.482680e-62 | -8.615850e-47 |
Msa0072600 | Msa0415160 | 0.850336 | 1.813920e-60 | -8.615850e-47 |
Msa0072600 | Msa0420300 | 0.818366 | 2.035388e-52 | -8.615850e-47 |
Msa0072600 | Msa0429490 | 0.812278 | 4.594250e-51 | -8.615850e-47 |
Msa0072600 | Msa0460170 | 0.837440 | 5.190907e-57 | -8.615850e-47 |
Msa0072600 | Msa0469700 | 0.811369 | 7.247133e-51 | -8.615850e-47 |
Msa0072600 | Msa0469870 | 0.840328 | 9.292827e-58 | -8.615850e-47 |
Msa0072600 | Msa0476170 | 0.809824 | 1.563106e-50 | -8.615850e-47 |
Msa0072600 | Msa0480040 | 0.806745 | 7.084319e-50 | -8.615850e-47 |
Msa0072600 | Msa0480090 | 0.881253 | 2.798702e-70 | -8.615850e-47 |
Msa0072600 | Msa0499890 | 0.818297 | 2.109557e-52 | -8.615850e-47 |
Msa0072600 | Msa0500610 | 0.823899 | 1.080556e-53 | -8.615850e-47 |
Msa0072600 | Msa0500700 | 0.842353 | 2.722856e-58 | -8.615850e-47 |
Msa0072600 | Msa0512950 | 0.856642 | 2.802521e-62 | -8.615850e-47 |
Msa0072600 | Msa0515440 | 0.847596 | 1.046423e-59 | -8.615850e-47 |
Msa0072600 | Msa0515580 | 0.800004 | 1.766024e-48 | -8.615850e-47 |
Msa0072600 | Msa0522820 | 0.818832 | 1.595676e-52 | -8.615850e-47 |
Msa0072600 | Msa0524470 | 0.831687 | 1.449326e-55 | -8.615850e-47 |
Msa0072600 | Msa0529000 | -0.800099 | 1.689050e-48 | -8.615850e-47 |
Msa0072600 | Msa0529780 | 0.808032 | 3.779949e-50 | -8.615850e-47 |
Msa0072600 | Msa0548650 | 0.895797 | 6.808862e-76 | -8.615850e-47 |
Msa0072600 | Msa0558650 | -0.818472 | 1.925592e-52 | -8.615850e-47 |
Msa0072600 | Msa0574930 | -0.831186 | 1.925523e-55 | -8.615850e-47 |
Msa0072600 | Msa0576080 | 0.810048 | 1.398721e-50 | -8.615850e-47 |
Msa0072600 | Msa0576120 | 0.812744 | 3.634886e-51 | -8.615850e-47 |
Msa0072600 | Msa0589260 | 0.825725 | 4.008424e-54 | -8.615850e-47 |
Msa0072600 | Msa0603690 | 0.882268 | 1.201685e-70 | -8.615850e-47 |
Msa0072600 | Msa0613420 | -0.806989 | 6.292318e-50 | -8.615850e-47 |
Msa0072600 | Msa0623470 | 0.808084 | 3.685471e-50 | -8.615850e-47 |
Msa0072600 | Msa0637930 | 0.852517 | 4.382433e-61 | -8.615850e-47 |
Msa0072600 | Msa0638010 | 0.845268 | 4.515614e-59 | -8.615850e-47 |
Msa0072600 | Msa0757390 | 0.800784 | 1.224878e-48 | -8.615850e-47 |
Msa0072600 | Msa0781330 | 0.852530 | 4.346350e-61 | -8.615850e-47 |
Msa0072600 | Msa0829210 | 0.800031 | 1.744095e-48 | -8.615850e-47 |
Msa0072600 | Msa0860880 | 0.818700 | 1.709113e-52 | -8.615850e-47 |
Msa0072600 | Msa0875070 | -0.826332 | 2.874407e-54 | -8.615850e-47 |
Msa0072600 | Msa0881530 | 0.826370 | 2.815464e-54 | -8.615850e-47 |
Msa0072600 | Msa0881880 | 0.806324 | 8.693361e-50 | -8.615850e-47 |
Msa0072600 | Msa0888460 | 0.809466 | 1.866319e-50 | -8.615850e-47 |
Msa0072600 | Msa0968470 | 0.868845 | 4.821277e-66 | -8.615850e-47 |
Msa0072600 | Msa0982090 | 0.821729 | 3.458090e-53 | -8.615850e-47 |
Msa0072600 | Msa0994250 | 0.815274 | 1.005531e-51 | -8.615850e-47 |
Msa0072600 | Msa1031460 | -0.814127 | 1.804607e-51 | -8.615850e-47 |
Msa0072600 | Msa1070540 | -0.805410 | 1.352729e-49 | -8.615850e-47 |
Msa0072600 | Msa1079720 | 0.891127 | 5.273223e-74 | -8.615850e-47 |
Msa0072600 | Msa1080610 | 0.870896 | 1.031867e-66 | -8.615850e-47 |
Msa0072600 | Msa1080680 | 0.870846 | 1.071530e-66 | -8.615850e-47 |
Msa0072600 | Msa1085610 | 0.809847 | 1.545650e-50 | -8.615850e-47 |
Msa0072600 | Msa1087520 | 0.829767 | 4.281362e-55 | -8.615850e-47 |
Msa0072600 | Msa1101240 | -0.809103 | 2.232246e-50 | -8.615850e-47 |
Msa0072600 | Msa1124530 | 0.867754 | 1.084266e-65 | -8.615850e-47 |
Msa0072600 | Msa1126320 | 0.849751 | 2.643736e-60 | -8.615850e-47 |
Msa0072600 | Msa1129300 | 0.818652 | 1.752631e-52 | -8.615850e-47 |
Msa0072600 | Msa1159160 | -0.840868 | 6.709502e-58 | -8.615850e-47 |
Msa0072600 | Msa1164720 | 0.829449 | 5.115968e-55 | -8.615850e-47 |
Msa0072600 | Msa1167150 | 0.875388 | 3.205844e-68 | -8.615850e-47 |
Msa0072600 | Msa1168050 | 0.851653 | 7.713271e-61 | -8.615850e-47 |
Msa0072600 | Msa1190100 | 0.803257 | 3.800817e-49 | -8.615850e-47 |
Msa0072600 | Msa1208450 | 0.863148 | 3.061764e-64 | -8.615850e-47 |
Msa0072600 | Msa1211060 | 0.821387 | 4.149382e-53 | -8.615850e-47 |
Msa0072600 | Msa1229670 | 0.818629 | 1.774095e-52 | -8.615850e-47 |
Msa0072600 | Msa1252210 | 0.807123 | 5.893729e-50 | -8.615850e-47 |
Msa0072600 | Msa1258030 | 0.819860 | 9.305692e-53 | -8.615850e-47 |
Msa0072600 | Msa1265770 | -0.800705 | 1.271407e-48 | -8.615850e-47 |
Msa0072600 | Msa1294600 | 0.806355 | 8.564155e-50 | -8.615850e-47 |
Msa0072600 | Msa1298390 | 0.866478 | 2.768391e-65 | -8.615850e-47 |
Msa0072600 | Msa1303320 | -0.802803 | 4.717915e-49 | -8.615850e-47 |
Msa0072600 | Msa1325560 | 0.835591 | 1.534617e-56 | -8.615850e-47 |
Msa0072600 | Msa1357710 | 0.834734 | 2.525054e-56 | -8.615850e-47 |
Msa0072600 | Msa1363820 | 0.806164 | 9.397492e-50 | -8.615850e-47 |
Msa0072600 | Msa1364350 | 0.836545 | 8.786574e-57 | -8.615850e-47 |
Msa0072600 | Msa1365420 | 0.813363 | 2.659127e-51 | -8.615850e-47 |
Msa0072600 | Msa1367560 | 0.831139 | 1.977667e-55 | -8.615850e-47 |
Msa0072600 | Msa1375610 | 0.817543 | 3.123214e-52 | -8.615850e-47 |
Msa0072600 | Msa1375970 | 0.801088 | 1.061903e-48 | -8.615850e-47 |
Msa0072600 | Msa1376550 | 0.808878 | 2.493949e-50 | -8.615850e-47 |
Msa0072600 | Msa1376680 | 0.818422 | 1.976744e-52 | -8.615850e-47 |
Msa0072600 | Msa1382380 | 0.818830 | 1.597253e-52 | -8.615850e-47 |
Msa0072600 | Msa1411930 | 0.806900 | 6.569876e-50 | -8.615850e-47 |
Msa0072600 | Msa1460060 | 0.812682 | 3.749703e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0072600 | MtrunA17_Chr1g0179631 | 84.211 | 893 | 97 | 7 | 37 | 900 | 1 | 878 | 0.0 | 1389 |
Msa0072600 | MtrunA17_Chr3g0086081 | 33.779 | 299 | 168 | 10 | 550 | 832 | 1 | 285 | 9.58e-37 | 142 |
Msa0072600 | MtrunA17_Chr4g0010341 | 31.210 | 157 | 102 | 2 | 538 | 690 | 185 | 339 | 7.44e-25 | 109 |
Msa0072600 | MtrunA17_Chr4g0039731 | 30.120 | 249 | 166 | 4 | 537 | 782 | 165 | 408 | 9.07e-20 | 95.1 |
Msa0072600 | MtrunA17_Chr4g0025081 | 28.502 | 207 | 141 | 3 | 535 | 734 | 226 | 432 | 9.06e-18 | 87.8 |
Msa0072600 | MtrunA17_Chr1g0179111 | 27.734 | 256 | 148 | 9 | 459 | 684 | 145 | 393 | 1.60e-15 | 80.5 |
Msa0072600 | MtrunA17_Chr1g0176161 | 25.000 | 456 | 276 | 12 | 450 | 866 | 51 | 479 | 2.31e-15 | 80.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 290 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATATACATGTAATGGAAAT+TGG | 0.167483 | 1_2:+45650096 | None:intergenic |
GATATACAAGTAATGGAAAT+TGG | 0.185502 | 1_2:+45649814 | None:intergenic |
TCACTTGATAGTGGATATTT+TGG | 0.205904 | 1_2:+45650038 | None:intergenic |
AGGTTTAAAATATCCCTTTC+TGG | 0.230565 | 1_2:+45647709 | None:intergenic |
GACTGTATGGCAAAGTTTAT+TGG | 0.246279 | 1_2:-45649067 | Msa0072600:CDS |
CCTTGTGTTCCTTGAAATCC+TGG | 0.250219 | 1_2:+45649663 | None:intergenic |
TTGTAGAACCTCAACCAAAT+TGG | 0.252973 | 1_2:+45648394 | None:intergenic |
TAGGGAGTTGGTTCCCAATT+TGG | 0.269466 | 1_2:-45648408 | Msa0072600:CDS |
TCGCAAGTGGCGCACTCATC+TGG | 0.284232 | 1_2:-45650957 | Msa0072600:CDS |
TTAGGATGACTAGACTTTAA+TGG | 0.313659 | 1_2:+45649636 | None:intergenic |
TGATGGAACCTCTTTCTTGT+AGG | 0.317594 | 1_2:+45648968 | None:intergenic |
TTGCCCTATCGTCATCATTT+AGG | 0.327091 | 1_2:+45649337 | None:intergenic |
TTCACAGACTTACCCTTTAG+TGG | 0.344824 | 1_2:+45649515 | None:intergenic |
ATCTCAGCGTCCGCCTTATC+AGG | 0.352764 | 1_2:-45649610 | Msa0072600:CDS |
GATACACAGCTGATGAAGTA+TGG | 0.355135 | 1_2:+45650453 | None:intergenic |
GATACACAGCTGATGAAGTA+TGG | 0.355135 | 1_2:+45650744 | None:intergenic |
TTGAGGGAAGTTCGTCTTAA+GGG | 0.355793 | 1_2:-45649114 | Msa0072600:CDS |
AATGTCAATACTATCACTTC+TGG | 0.364657 | 1_2:-45647770 | Msa0072600:three_prime_UTR |
AACATCTTTCCCCTTATCAT+TGG | 0.367203 | 1_2:+45651015 | None:intergenic |
AAAGTAACTCGAGTAGTTTC+TGG | 0.368232 | 1_2:-45649945 | Msa0072600:CDS |
ACATCTTTCCCCTTATCATT+GGG | 0.370025 | 1_2:+45651016 | None:intergenic |
AGTAATGGAAATTGGGTAGA+TGG | 0.384566 | 1_2:+45649822 | None:intergenic |
TACGTGTTGCGTTGTGTTGA+TGG | 0.386656 | 1_2:+45648951 | None:intergenic |
GGCCCCTTTCTTGTAGTTGA+CGG | 0.387502 | 1_2:+45648484 | None:intergenic |
TTACCTGATTCTTTCTAGAA+TGG | 0.393574 | 1_2:+45648751 | None:intergenic |
TGTAATGGAAATTGGGTAGA+TGG | 0.393624 | 1_2:+45650104 | None:intergenic |
TTTGAAGGTTCACTTGATAG+TGG | 0.397186 | 1_2:+45650029 | None:intergenic |
TGTAGAACCTCAACCAAATT+GGG | 0.399007 | 1_2:+45648395 | None:intergenic |
TATGTAGGTGGTGGATAAAT+AGG | 0.400107 | 1_2:+45650377 | None:intergenic |
CATGAGTCTTAATATTCCTT+TGG | 0.400784 | 1_2:-45648462 | Msa0072600:CDS |
TTTGTAGGTGGTGGATAAAT+AGG | 0.401237 | 1_2:+45650668 | None:intergenic |
ACTAACCCACCCAATGATAA+GGG | 0.402555 | 1_2:-45651025 | Msa0072600:CDS |
TCACATAATGTCATTGCTAT+TGG | 0.405215 | 1_2:+45646627 | None:intergenic |
CTAGGTGGACGCTTCTTTGA+AGG | 0.409645 | 1_2:+45650014 | None:intergenic |
ACCTCGATTCCTTTGAAAAG+AGG | 0.410029 | 1_2:-45647690 | Msa0072600:intron |
GTTGAGGGAAGTTCGTCTTA+AGG | 0.412066 | 1_2:-45649115 | Msa0072600:CDS |
AAGCGTCCACCTAGTGATAA+GGG | 0.413682 | 1_2:-45650005 | Msa0072600:CDS |
TGACCATTCTAGAAAGAATC+AGG | 0.425997 | 1_2:-45648754 | Msa0072600:intron |
GGCAAAGTTTATTGGAGCAT+TGG | 0.431611 | 1_2:-45649059 | Msa0072600:CDS |
GTTATTCAACCTTCCACTAA+AGG | 0.432341 | 1_2:-45649528 | Msa0072600:CDS |
TTATTCAACCTTCCACTAAA+GGG | 0.433677 | 1_2:-45649527 | Msa0072600:intron |
ACCACTTGTTCGGGTGTAGT+TGG | 0.436086 | 1_2:-45648539 | Msa0072600:CDS |
ATATACATGTAATGGAAATT+GGG | 0.437628 | 1_2:+45650097 | None:intergenic |
GTTCCTTGAAATCCTGGGTT+GGG | 0.437913 | 1_2:+45649669 | None:intergenic |
ACTCAGATCATGAAGGAAAC+TGG | 0.440348 | 1_2:-45648789 | Msa0072600:CDS |
AACTAACCCACCCAATGATA+AGG | 0.441389 | 1_2:-45651026 | Msa0072600:CDS |
TGTTCCTTGAAATCCTGGGT+TGG | 0.444757 | 1_2:+45649668 | None:intergenic |
TCGTCGGCACAGGTATAAAT+TGG | 0.445880 | 1_2:+45650192 | None:intergenic |
AGAGGAGTTCAAACGTGAAC+GGG | 0.446513 | 1_2:-45648824 | Msa0072600:CDS |
GCAGGGTTACAACTCATAGA+TGG | 0.450605 | 1_2:+45648584 | None:intergenic |
TCATCGGCATAGGTATAAAC+TGG | 0.451031 | 1_2:+45649910 | None:intergenic |
ATATACAAGTAATGGAAATT+GGG | 0.451555 | 1_2:+45649815 | None:intergenic |
GACACCCTTCCCCTTACCAC+TGG | 0.453777 | 1_2:+45650274 | None:intergenic |
CAAGCGGCCACCCAGTGGTA+AGG | 0.455295 | 1_2:-45650285 | Msa0072600:CDS |
ATGCCCAACCCAGGATTTCA+AGG | 0.458880 | 1_2:-45649672 | Msa0072600:CDS |
CCACCCGACAATGGATTTGT+AGG | 0.461139 | 1_2:+45650317 | None:intergenic |
ATTGGATAGGCGAGACTGTA+TGG | 0.461345 | 1_2:-45649080 | Msa0072600:CDS |
CCACCCGACAACGGATTTGT+AGG | 0.461868 | 1_2:+45650653 | None:intergenic |
TTTAGTGGATATACATGTAA+TGG | 0.462255 | 1_2:+45650089 | None:intergenic |
GTTGGTTCCCAATTTGGTTG+AGG | 0.463056 | 1_2:-45648402 | Msa0072600:CDS |
CTTGTGTTCCTTGAAATCCT+GGG | 0.463860 | 1_2:+45649664 | None:intergenic |
GGAGGCTGAGTATAGGTATG+AGG | 0.464859 | 1_2:+45649864 | None:intergenic |
GAAGCGTCCACCTAGTGATA+AGG | 0.465742 | 1_2:-45650006 | Msa0072600:CDS |
GGGATTAACATGTTTGATGA+TGG | 0.472319 | 1_2:-45649558 | Msa0072600:CDS |
AAACGTGAACGGGCTTCATA+AGG | 0.475012 | 1_2:-45648814 | Msa0072600:CDS |
GTTCACGTTTGAACTCCTCT+TGG | 0.475194 | 1_2:+45648827 | None:intergenic |
GGCACAGGTATAAATTGGTC+TGG | 0.477208 | 1_2:+45650197 | None:intergenic |
GATCAGAGGGTTGGAGGCGG+CGG | 0.480017 | 1_2:+45648174 | None:intergenic |
TGAGAACTGGTAGGTGGAGG+TGG | 0.480811 | 1_2:+45650131 | None:intergenic |
CCATCTTGACCAGCCTGATA+AGG | 0.480953 | 1_2:+45649597 | None:intergenic |
CGGGTGGACTTTCACACAAA+CGG | 0.482984 | 1_2:-45650637 | Msa0072600:CDS |
CTGGGTGGCCGCTTGTGTAA+AGG | 0.484039 | 1_2:+45650293 | None:intergenic |
AACCAACTCCCTACCACTAC+AGG | 0.484892 | 1_2:+45648418 | None:intergenic |
AGAAACATGGCATCAAAGAA+AGG | 0.485403 | 1_2:-45648997 | Msa0072600:CDS |
GGGGCAACAACATCCTTAGC+AGG | 0.485567 | 1_2:+45648566 | None:intergenic |
GCTAGAATGACTAGTGGTAA+TGG | 0.486198 | 1_2:+45650247 | None:intergenic |
CAACTGCACTTTACCAGAAA+GGG | 0.486789 | 1_2:-45647722 | Msa0072600:three_prime_UTR |
GAAACATGGCATCAAAGAAA+GGG | 0.487800 | 1_2:-45648996 | Msa0072600:CDS |
CTCTGATCATGAGTCTACTT+TGG | 0.487817 | 1_2:-45648159 | Msa0072600:CDS |
CATTCTAGCAAGGTAACTCC+TGG | 0.488789 | 1_2:-45650233 | Msa0072600:CDS |
TCTTTCCCCTTATCATTGGG+TGG | 0.488915 | 1_2:+45651019 | None:intergenic |
TTGAAATCCTGGGTTGGGCA+TGG | 0.490031 | 1_2:+45649674 | None:intergenic |
ATGCCGTCAACTACAAGAAA+GGG | 0.493045 | 1_2:-45648487 | Msa0072600:CDS |
TGCGGTGGATATACAAGTAA+TGG | 0.493457 | 1_2:+45649807 | None:intergenic |
TATCCTGATGGTGTATGTTT+CGG | 0.493683 | 1_2:+45650701 | None:intergenic |
GATGGTGCATAGGCATTTAG+TGG | 0.494838 | 1_2:+45650074 | None:intergenic |
CCACCGAAACATACACCATC+AGG | 0.495567 | 1_2:-45650704 | Msa0072600:CDS |
CCACCGAAACTTACACCATC+GGG | 0.496584 | 1_2:-45650413 | Msa0072600:CDS |
GACAATGGATTTGTAGGTGG+TGG | 0.498910 | 1_2:+45650323 | None:intergenic |
TGATCATGAGTCTACTTTGG+TGG | 0.499231 | 1_2:-45648156 | Msa0072600:CDS |
CTTTCCCCTTATCATTGGGT+GGG | 0.499770 | 1_2:+45651020 | None:intergenic |
TGAGTATAGGTATGAGGAGA+TGG | 0.499968 | 1_2:+45649870 | None:intergenic |
AACGCAACACGTAACTCAAA+TGG | 0.500116 | 1_2:-45648941 | Msa0072600:intron |
GCCACCCAGTGGTAAGGGGA+AGG | 0.502442 | 1_2:-45650279 | Msa0072600:CDS |
GAAGTATGGGTAGGTGGAGG+CGG | 0.502512 | 1_2:+45650758 | None:intergenic |
GGTAGATGGAGATTGAGAAC+TGG | 0.505071 | 1_2:+45650118 | None:intergenic |
GATATCGCATCCACTACTAA+TGG | 0.505243 | 1_2:-45649978 | Msa0072600:CDS |
CCACCTACAAATCCGTTGTC+GGG | 0.507001 | 1_2:-45650656 | Msa0072600:CDS |
CCACCTACAAATCCATTGTC+GGG | 0.509021 | 1_2:-45650320 | Msa0072600:CDS |
CAATAGATAAACATGTCATC+AGG | 0.512057 | 1_2:-45651052 | Msa0072600:intron |
AGCCTGTAGTGGTAGGGAGT+TGG | 0.512995 | 1_2:-45648420 | Msa0072600:CDS |
CAAACGGCCAGTCAGTGGTA+AGG | 0.513566 | 1_2:-45650621 | Msa0072600:CDS |
GCCAGTCAGTGGTAAGGGGA+AGG | 0.513865 | 1_2:-45650615 | Msa0072600:CDS |
ATAGGTATAAACTGGTCTAA+AGG | 0.514240 | 1_2:+45649918 | None:intergenic |
GGAACATAGGTACGAGGAGA+TGG | 0.514609 | 1_2:+45650152 | None:intergenic |
GAGAGAATGACTAGTGGTAG+TGG | 0.516279 | 1_2:+45650583 | None:intergenic |
CAAAGGAATATTAAGACTCA+TGG | 0.516583 | 1_2:+45648463 | None:intergenic |
GTGTAGTTGGAGGTAAGAAA+AGG | 0.517698 | 1_2:-45648526 | Msa0072600:CDS |
AAAAGCCACAGACAAAATGT+AGG | 0.518392 | 1_2:-45649368 | Msa0072600:CDS |
CATCGTTAGCCTGTAGTGGT+AGG | 0.519129 | 1_2:-45648427 | Msa0072600:CDS |
AAGCGGCCACCCAGTGGTAA+GGG | 0.520413 | 1_2:-45650284 | Msa0072600:CDS |
GGTAGGTGGAGGCTGAGTAT+AGG | 0.521908 | 1_2:+45649857 | None:intergenic |
TTGCTGAAGAAACGGACAGA+GGG | 0.522070 | 1_2:-45648296 | Msa0072600:CDS |
ACCACCTACAAATCCATTGT+CGG | 0.522590 | 1_2:-45650321 | Msa0072600:CDS |
GGAGGCGGCGGTGACGTCCA+TGG | 0.522976 | 1_2:+45648186 | None:intergenic |
CTGTTGAGCGCACTCGCAAG+TGG | 0.523090 | 1_2:-45650970 | Msa0072600:CDS |
ACCACCTACAAATCCGTTGT+CGG | 0.525060 | 1_2:-45650657 | Msa0072600:CDS |
TATCCCGATGGTGTAAGTTT+CGG | 0.525804 | 1_2:+45650410 | None:intergenic |
CCAGTCAGTGGTAAGGGGAA+GGG | 0.526964 | 1_2:-45650614 | Msa0072600:CDS |
GTATCTTTAGTCAGCGGCAT+AGG | 0.527229 | 1_2:+45650905 | None:intergenic |
AAACGGCCAGTCAGTGGTAA+GGG | 0.527405 | 1_2:-45650620 | Msa0072600:CDS |
CAGCGTCCGCCTTATCAGGC+TGG | 0.530739 | 1_2:-45649606 | Msa0072600:CDS |
AGTGGTAAGGGGAAGGGTGT+CGG | 0.531423 | 1_2:-45650608 | Msa0072600:CDS |
GATCATGAGTCTACTTTGGT+GGG | 0.532480 | 1_2:-45648155 | Msa0072600:CDS |
CCACTTGATAGTGGATATGT+AGG | 0.532942 | 1_2:+45649726 | None:intergenic |
TGTGAAGGTCCACTTGATAG+TGG | 0.533328 | 1_2:+45649717 | None:intergenic |
ACACCCTTCCCCTTACCACT+GGG | 0.533838 | 1_2:+45650275 | None:intergenic |
ATCTGTGTATGTGCAGTTGT+CGG | 0.534228 | 1_2:+45650512 | None:intergenic |
ACTCATGATCAGAGGGTTGG+AGG | 0.534387 | 1_2:+45648168 | None:intergenic |
CCACCCAGTGGTAAGGGGAA+GGG | 0.534766 | 1_2:-45650278 | Msa0072600:CDS |
AAATTATTCGCTCAAGACCA+TGG | 0.535708 | 1_2:-45648203 | Msa0072600:CDS |
GACTGAGAACGGGTAGGTGG+AGG | 0.537395 | 1_2:+45649846 | None:intergenic |
TGATAAGGCGGACGCTGAGA+TGG | 0.537853 | 1_2:+45649612 | None:intergenic |
ACTCGAATTTCCTCGCGAGT+AGG | 0.538984 | 1_2:+45650845 | None:intergenic |
AACAGTAGGTCTAGTAGTAG+TGG | 0.539497 | 1_2:+45650988 | None:intergenic |
GATGCCGTCAACTACAAGAA+AGG | 0.540009 | 1_2:-45648488 | Msa0072600:CDS |
CTACACCCGAACAAGTGGTA+AGG | 0.540049 | 1_2:+45648543 | None:intergenic |
GGAGCATATGTACGAGGAGA+TGG | 0.541412 | 1_2:+45650779 | None:intergenic |
AGTGGTAAGGGGAAGGGTGT+CGG | 0.543479 | 1_2:-45650272 | Msa0072600:CDS |
ATGTTGCATCCACTACTACT+AGG | 0.543509 | 1_2:-45650868 | Msa0072600:CDS |
CAGACTTACCCTTTAGTGGA+AGG | 0.544209 | 1_2:+45649519 | None:intergenic |
AATGAGTGGTTGGAAAGTAA+TGG | 0.544788 | 1_2:-45651649 | Msa0072600:CDS |
GTATGTGCAGTCGTCGGCAC+AGG | 0.546385 | 1_2:+45650182 | None:intergenic |
ACTTGTTCGGGTGTAGTTGG+AGG | 0.547278 | 1_2:-45648536 | Msa0072600:CDS |
CCTTATCAGGCTGGTCAAGA+TGG | 0.548609 | 1_2:-45649597 | Msa0072600:CDS |
GGCGGACGCTGAGATGGCTT+AGG | 0.550526 | 1_2:+45649618 | None:intergenic |
TCAACTGCACTTTACCAGAA+AGG | 0.550910 | 1_2:-45647723 | Msa0072600:three_prime_UTR |
TAGACTCATGATCAGAGGGT+TGG | 0.552877 | 1_2:+45648165 | None:intergenic |
GTGACCTAAATGATGACGAT+AGG | 0.557016 | 1_2:-45649341 | Msa0072600:CDS |
AAGATCCTGTTCGAAAACTA+CGG | 0.557292 | 1_2:-45648352 | Msa0072600:CDS |
TGAGCATATGTATGAGAAGA+TGG | 0.562096 | 1_2:+45650488 | None:intergenic |
TATGAGTTGTAACCCTGCTA+AGG | 0.563576 | 1_2:-45648579 | Msa0072600:CDS |
CCCTTCCCCTTACCACTGAC+TGG | 0.566348 | 1_2:+45650614 | None:intergenic |
AGCGGCCACCCAGTGGTAAG+GGG | 0.566990 | 1_2:-45650283 | Msa0072600:CDS |
GGAGATTGAGAACTGGTAGG+TGG | 0.567399 | 1_2:+45650125 | None:intergenic |
TTTAGTTCCATGCCCAACCC+AGG | 0.569175 | 1_2:-45649681 | Msa0072600:CDS |
GGTAGATGGAGACTGAGAAC+GGG | 0.569951 | 1_2:+45649836 | None:intergenic |
GGCAATCAAGACGTTGATGT+TGG | 0.570273 | 1_2:-45648134 | Msa0072600:CDS |
TCCAACTACACCCGAACAAG+TGG | 0.570300 | 1_2:+45648538 | None:intergenic |
GGGTAGATGGAGACTGAGAA+CGG | 0.570642 | 1_2:+45649835 | None:intergenic |
AAATACAGGAGAAGTGTACA+TGG | 0.571389 | 1_2:-45649206 | Msa0072600:intron |
GGTCAGTGCCCACATTGGAT+AGG | 0.573158 | 1_2:-45649093 | Msa0072600:CDS |
CCCGATGGTGTAAGTTTCGG+TGG | 0.573397 | 1_2:+45650413 | None:intergenic |
GTCTGTGTATGTGCAGTCGT+GGG | 0.574424 | 1_2:+45650803 | None:intergenic |
TTGCGAGTGCGCTCAACAGT+AGG | 0.576521 | 1_2:+45650974 | None:intergenic |
ATCGTTAGCCTGTAGTGGTA+GGG | 0.576808 | 1_2:-45648426 | Msa0072600:CDS |
AGCTGGTCTAAAACATGTTG+AGG | 0.579381 | 1_2:+45650932 | None:intergenic |
TACACCCGAACAAGTGGTAA+GGG | 0.579884 | 1_2:+45648544 | None:intergenic |
TGTAAAGGTCCACCCGACAA+TGG | 0.581837 | 1_2:+45650308 | None:intergenic |
AAAGCCACAGACAAAATGTA+GGG | 0.582116 | 1_2:-45649367 | Msa0072600:CDS |
ACCGCATACATATGCACCAC+CGG | 0.582783 | 1_2:-45649790 | Msa0072600:CDS |
TTTGGCAGTGCGTATGTCGA+TGG | 0.583317 | 1_2:+45650056 | None:intergenic |
ACCACCGAAACTTACACCAT+CGG | 0.584439 | 1_2:-45650414 | Msa0072600:CDS |
TATGTAGGTGTTGGATATGT+CGG | 0.584602 | 1_2:+45649741 | None:intergenic |
CACCCGAACAAGTGGTAAGG+GGG | 0.585944 | 1_2:+45648546 | None:intergenic |
TGACCTAAATGATGACGATA+GGG | 0.586015 | 1_2:-45649340 | Msa0072600:CDS |
TCTCGGAGGAAATGAGTGGT+TGG | 0.586798 | 1_2:-45651659 | None:intergenic |
TGACTTGTCTGATATGTTGA+GGG | 0.587957 | 1_2:-45649130 | Msa0072600:CDS |
ACATCATGCATATGCTCCAT+CGG | 0.589782 | 1_2:-45650351 | Msa0072600:CDS |
GTATGTGCAGTCATCGGCAT+AGG | 0.589843 | 1_2:+45649900 | None:intergenic |
AAGAGGAGTTCAAACGTGAA+CGG | 0.590882 | 1_2:-45648825 | Msa0072600:CDS |
CCAGGATTTCAAGGAACACA+AGG | 0.592183 | 1_2:-45649663 | Msa0072600:CDS |
GCGAGTAGGCCTAGTAGTAG+TGG | 0.592919 | 1_2:+45650859 | None:intergenic |
CATGATCAGAGGGTTGGAGG+CGG | 0.593298 | 1_2:+45648171 | None:intergenic |
GTCGGCGGTGCGGATGTCGA+CGG | 0.593551 | 1_2:+45649759 | None:intergenic |
TACTACTAGGCCTACTCGCG+AGG | 0.593671 | 1_2:-45650855 | Msa0072600:CDS |
GGTGGTGCATATGCATGTTG+TGG | 0.593870 | 1_2:+45650431 | None:intergenic |
TGATGTGAATATGTAGGTGG+TGG | 0.594089 | 1_2:+45650368 | None:intergenic |
TGCGTATGTCGATGGTGCAT+AGG | 0.595753 | 1_2:+45650064 | None:intergenic |
GGTGGTGCATAGGCATGTTG+TGG | 0.595863 | 1_2:+45650722 | None:intergenic |
ATACACAGCTGATGAAGTAT+GGG | 0.598166 | 1_2:+45650454 | None:intergenic |
ATACACAGCTGATGAAGTAT+GGG | 0.598166 | 1_2:+45650745 | None:intergenic |
GTAGGTGGTGGATTCACCGA+TGG | 0.598426 | 1_2:+45650335 | None:intergenic |
CCACAGACAAAATGTAGGGA+TGG | 0.598675 | 1_2:-45649363 | Msa0072600:CDS |
GGTAGGTGGAGGTGGAACAT+AGG | 0.598829 | 1_2:+45650139 | None:intergenic |
GGGGAAAGCCTACAAGAAAG+AGG | 0.599017 | 1_2:-45648976 | Msa0072600:CDS |
CGGGTGGACCTTTACACAAG+CGG | 0.600983 | 1_2:-45650301 | Msa0072600:CDS |
TCTGGAGAACTAGAAACTCC+AGG | 0.601740 | 1_2:+45650215 | None:intergenic |
GGAGACTGAGAACGGGTAGG+TGG | 0.602886 | 1_2:+45649843 | None:intergenic |
AGATGGCATTCATGATGCTG+AGG | 0.604447 | 1_2:-45649580 | Msa0072600:CDS |
TCAGCGGCATAGGTACAAGC+TGG | 0.604900 | 1_2:+45650915 | None:intergenic |
CTGACTAAAGATACACAGAC+GGG | 0.607010 | 1_2:-45650896 | Msa0072600:CDS |
GTATGTGCAGTCGTGGGCAT+AGG | 0.609019 | 1_2:+45650809 | None:intergenic |
TGTATGTTTCGGTGGTGCAT+AGG | 0.609183 | 1_2:+45650712 | None:intergenic |
GTAGGTGGTGGATAAATAGG+TGG | 0.609496 | 1_2:+45650380 | None:intergenic |
GATGGCATTCATGATGCTGA+GGG | 0.610481 | 1_2:-45649579 | Msa0072600:CDS |
GGTGGTTGTGTGTATCCTGA+TGG | 0.611455 | 1_2:+45650689 | None:intergenic |
GCTGATGAAGTATGGGTAGG+TGG | 0.612690 | 1_2:+45650461 | None:intergenic |
GCTGATGAAGTATGGGTAGG+TGG | 0.612690 | 1_2:+45650752 | None:intergenic |
TACCACTAGTCATTCTCTCA+AGG | 0.612823 | 1_2:-45650579 | Msa0072600:CDS |
GATTGAGAACTGGTAGGTGG+AGG | 0.613125 | 1_2:+45650128 | None:intergenic |
CCTACATATCCACTATCAAG+TGG | 0.613583 | 1_2:-45649726 | Msa0072600:CDS |
GTTTGTGTATGTGCAGTCAT+CGG | 0.614271 | 1_2:+45649894 | None:intergenic |
GTCTGTGTATCTTTAGTCAG+CGG | 0.615011 | 1_2:+45650899 | None:intergenic |
AGCGTCCACCTAGTGATAAG+GGG | 0.616167 | 1_2:-45650004 | Msa0072600:CDS |
TTGGTGCCGATGATGAATGA+TGG | 0.617362 | 1_2:-45648115 | Msa0072600:intron |
AGTCTGTGTATGTGCAGTCG+TGG | 0.617498 | 1_2:+45650802 | None:intergenic |
GATAGTGGATATGTAGGTGT+TGG | 0.619025 | 1_2:+45649732 | None:intergenic |
GACAACGGATTTGTAGGTGG+TGG | 0.619207 | 1_2:+45650659 | None:intergenic |
GAAGCACCATCATTCATCAT+CGG | 0.619327 | 1_2:+45648109 | None:intergenic |
TATGCATGATGTGAATATGT+AGG | 0.619505 | 1_2:+45650362 | None:intergenic |
ACAGTCTCGCCTATCCAATG+TGG | 0.619509 | 1_2:+45649084 | None:intergenic |
GATGCTCTTGCATTATCCAA+AGG | 0.620366 | 1_2:+45648446 | None:intergenic |
ATCTGTGTATGTGCAGTCGT+CGG | 0.624063 | 1_2:+45650176 | None:intergenic |
AAAGTAGACTCATGATCAGA+GGG | 0.624247 | 1_2:+45648161 | None:intergenic |
TAAGGATACTCAGATCATGA+AGG | 0.624522 | 1_2:-45648796 | Msa0072600:CDS |
CAAAGTAGACTCATGATCAG+AGG | 0.624934 | 1_2:+45648160 | None:intergenic |
TTGTCGGTGCAGCTATACAT+TGG | 0.624983 | 1_2:+45650528 | None:intergenic |
AACGGCCAGTCAGTGGTAAG+GGG | 0.625413 | 1_2:-45650619 | Msa0072600:CDS |
CCTGATGGTGTATGTTTCGG+TGG | 0.626388 | 1_2:+45650704 | None:intergenic |
GATGAAGTATGGGTAGGTGG+AGG | 0.627193 | 1_2:+45650755 | None:intergenic |
TACCACTAGTCATTCTAGCA+AGG | 0.630639 | 1_2:-45650243 | Msa0072600:CDS |
ACACCCGAACAAGTGGTAAG+GGG | 0.633338 | 1_2:+45648545 | None:intergenic |
AGAGCATCGTTAGCCTGTAG+TGG | 0.637169 | 1_2:-45648431 | Msa0072600:CDS |
GCGAGAACGACCATTAGTAG+TGG | 0.637821 | 1_2:+45649968 | None:intergenic |
CAGTCTCGCCTATCCAATGT+GGG | 0.638006 | 1_2:+45649085 | None:intergenic |
AAACATGGCATCAAAGAAAG+GGG | 0.640330 | 1_2:-45648995 | Msa0072600:CDS |
TCTTGACCAGCCTGATAAGG+CGG | 0.640440 | 1_2:+45649600 | None:intergenic |
CTAACCCACCCAATGATAAG+GGG | 0.640535 | 1_2:-45651024 | Msa0072600:CDS |
TGTGAAAGTCCACCCGACAA+CGG | 0.640872 | 1_2:+45650644 | None:intergenic |
CCCGACAATGGATTTGTAGG+TGG | 0.641838 | 1_2:+45650320 | None:intergenic |
TATAGACTAAGAAGTCCAAG+AGG | 0.643321 | 1_2:-45648842 | Msa0072600:intron |
TCACTAACAAAATTACAAGA+CGG | 0.643632 | 1_2:+45646589 | None:intergenic |
CCTACAAATCCGTTGTCGGG+TGG | 0.643713 | 1_2:-45650653 | Msa0072600:CDS |
GTAGGTGGTGGATAAATAGG+TGG | 0.645462 | 1_2:+45650671 | None:intergenic |
GATGGAGATTGAGAACTGGT+AGG | 0.646075 | 1_2:+45650122 | None:intergenic |
TACCTTGCTAGAATGACTAG+TGG | 0.646973 | 1_2:+45650241 | None:intergenic |
TTAAGGGTCAGTGCCCACAT+TGG | 0.648200 | 1_2:-45649098 | Msa0072600:CDS |
TCACACAAACGGCCAGTCAG+TGG | 0.648647 | 1_2:-45650626 | Msa0072600:CDS |
CCCGACAACGGATTTGTAGG+TGG | 0.651696 | 1_2:+45650656 | None:intergenic |
CCCTTCCCCTTACCACTGGG+TGG | 0.654508 | 1_2:+45650278 | None:intergenic |
GTGACTTGTCTGATATGTTG+AGG | 0.654751 | 1_2:-45649131 | Msa0072600:CDS |
TGCTGAAGAAACGGACAGAG+GGG | 0.654920 | 1_2:-45648295 | Msa0072600:CDS |
GCTGACTAAAGATACACAGA+CGG | 0.660781 | 1_2:-45650897 | Msa0072600:CDS |
AATAGCAATGACATTATGTG+AGG | 0.662671 | 1_2:-45646625 | Msa0072600:three_prime_UTR |
GCGTCCACCTAGTGATAAGG+GGG | 0.664476 | 1_2:-45650003 | Msa0072600:CDS |
ATCAAGTGGACCTTCACACA+AGG | 0.664485 | 1_2:-45649712 | Msa0072600:CDS |
TTTGTCTCGGAGGAAATGAG+TGG | 0.664898 | 1_2:-45651663 | None:intergenic |
ACAGCTGATGAAGTATGGGT+AGG | 0.665045 | 1_2:+45650458 | None:intergenic |
ACAGCTGATGAAGTATGGGT+AGG | 0.665045 | 1_2:+45650749 | None:intergenic |
GTCGACGGTGTATACGCCGG+TGG | 0.665297 | 1_2:+45649774 | None:intergenic |
TATAGGAGAAGTGTGAGGCG+AGG | 0.665947 | 1_2:-45648643 | Msa0072600:intron |
ACCCGAACAAGTGGTAAGGG+GGG | 0.667715 | 1_2:+45648547 | None:intergenic |
TAGATAAACATGTCATCAGG+AGG | 0.668522 | 1_2:-45651049 | Msa0072600:CDS |
AAAGATTATGAATTCGCAGG+GGG | 0.672074 | 1_2:-45648321 | Msa0072600:CDS |
TGCCGTCAACTACAAGAAAG+GGG | 0.675987 | 1_2:-45648486 | Msa0072600:CDS |
GGGCAACAACATCCTTAGCA+GGG | 0.676632 | 1_2:+45648567 | None:intergenic |
GATGTCGACGGTGTATACGC+CGG | 0.677914 | 1_2:+45649771 | None:intergenic |
TTGGGCATGGAACTAAATTG+TGG | 0.681887 | 1_2:+45649687 | None:intergenic |
ATAGGTCAACTGAAAACTAG+CGG | 0.685932 | 1_2:+45649032 | None:intergenic |
GGTGGCAGTGTGTATCCCGA+TGG | 0.687025 | 1_2:+45650398 | None:intergenic |
GATGGAGACTGAGAACGGGT+AGG | 0.689290 | 1_2:+45649840 | None:intergenic |
TTCATTATAGGAGAAGTGTG+AGG | 0.694705 | 1_2:-45648648 | Msa0072600:intron |
ATTGCTGAAGAAACGGACAG+AGG | 0.696753 | 1_2:-45648297 | Msa0072600:CDS |
CCTACAAATCCATTGTCGGG+TGG | 0.698994 | 1_2:-45650317 | Msa0072600:CDS |
TACCTTGAGAGAATGACTAG+TGG | 0.700140 | 1_2:+45650577 | None:intergenic |
AATTGTGGTACCTTGTGTGA+AGG | 0.703679 | 1_2:+45649702 | None:intergenic |
GATGAAGTATGGGTAGGTGG+AGG | 0.705834 | 1_2:+45650464 | None:intergenic |
AAAAGATTATGAATTCGCAG+GGG | 0.706642 | 1_2:-45648322 | Msa0072600:CDS |
GCATGATGTGAATATGTAGG+TGG | 0.708116 | 1_2:+45650365 | None:intergenic |
CATATCAGACAAGTCACGCG+AGG | 0.709129 | 1_2:+45649137 | None:intergenic |
TTACACAAGCGGCCACCCAG+TGG | 0.712688 | 1_2:-45650290 | Msa0072600:CDS |
ATGGCATTCATGATGCTGAG+GGG | 0.723530 | 1_2:-45649578 | Msa0072600:CDS |
GTAGGTGTTGGATATGTCGG+CGG | 0.725546 | 1_2:+45649744 | None:intergenic |
GGTGGTGCATATGTATGCGG+TGG | 0.727513 | 1_2:+45649792 | None:intergenic |
GCCGGTGGTGCATATGTATG+CGG | 0.731075 | 1_2:+45649789 | None:intergenic |
TGTTGGATATGTCGGCGGTG+CGG | 0.734289 | 1_2:+45649749 | None:intergenic |
GGAGGTGGAACATAGGTACG+AGG | 0.741556 | 1_2:+45650146 | None:intergenic |
GGAGGCGGAGCATATGTACG+AGG | 0.748386 | 1_2:+45650773 | None:intergenic |
TGACTAAAGATACACAGACG+GGG | 0.766798 | 1_2:-45650895 | Msa0072600:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATATAAACATTTTATG+AGG | - | chr1_2:45646799-45646818 | Msa0072600:intron | 10.0% |
!! | TTATGTTATATAAAAAATAC+AGG | - | chr1_2:45649022-45649041 | Msa0072600:CDS | 10.0% |
!! | ATATAGAAAAATTAAGATGT+TGG | - | chr1_2:45647064-45647083 | Msa0072600:intron | 15.0% |
!!! | TTTTATCTTTTTTCTCATTT+TGG | - | chr1_2:45647093-45647112 | Msa0072600:intron | 15.0% |
!!! | TTTGTATTGATTTATTAACA+TGG | - | chr1_2:45648782-45648801 | Msa0072600:CDS | 15.0% |
!!! | TAGTTCTTCTTTATTTATTT+TGG | - | chr1_2:45649337-45649356 | Msa0072600:CDS | 15.0% |
!!! | AGTTCTTCTTTATTTATTTT+GGG | - | chr1_2:45649338-45649357 | Msa0072600:CDS | 15.0% |
!! | GTTTCAAAAAATTATCATTA+TGG | - | chr1_2:45650662-45650681 | Msa0072600:CDS | 15.0% |
!! | AAAAGAATTTAAAAAGAGAA+CGG | - | chr1_2:45651058-45651077 | Msa0072600:intron | 15.0% |
!!! | ATATACATGTAATGGAAATT+GGG | + | chr1_2:45648148-45648167 | None:intergenic | 20.0% |
!!! | ATATACAAGTAATGGAAATT+GGG | + | chr1_2:45648430-45648449 | None:intergenic | 20.0% |
!! | TTATTAACATGGTATTGTTA+AGG | - | chr1_2:45648793-45648812 | Msa0072600:CDS | 20.0% |
!! | AAATAAAGAAGAACTAGTTA+AGG | + | chr1_2:45649333-45649352 | None:intergenic | 20.0% |
!! | TTTGTATGGTTATTCATTAT+AGG | - | chr1_2:45649582-45649601 | Msa0072600:CDS | 20.0% |
!!! | TTGTCTTGTTTATGTTTTTT+TGG | - | chr1_2:45650170-45650189 | Msa0072600:CDS | 20.0% |
!!! | TGTTTTGAATGTTATACTTA+TGG | + | chr1_2:45650692-45650711 | None:intergenic | 20.0% |
!! | TTAAACAGAAATATGAACTT+AGG | - | chr1_2:45650805-45650824 | Msa0072600:CDS | 20.0% |
!!! | AAATGAGTTTTTTAAGTGAT+AGG | - | chr1_2:45650875-45650894 | Msa0072600:CDS | 20.0% |
!!! | AATGTTTTTTGTACAACTAA+AGG | - | chr1_2:45650939-45650958 | Msa0072600:CDS | 20.0% |
!!! | TATCTTTTTTCTCATTTTGG+TGG | - | chr1_2:45647096-45647115 | Msa0072600:intron | 25.0% |
!! | GATATACATGTAATGGAAAT+TGG | + | chr1_2:45648149-45648168 | None:intergenic | 25.0% |
!! | TTTAGTGGATATACATGTAA+TGG | + | chr1_2:45648156-45648175 | None:intergenic | 25.0% |
!! | GATATACAAGTAATGGAAAT+TGG | + | chr1_2:45648431-45648450 | None:intergenic | 25.0% |
!!! | TTGTTATTTGACTCTTTGTA+TGG | - | chr1_2:45649568-45649587 | Msa0072600:CDS | 25.0% |
! | AAAAAAGATTATGAATTCGC+AGG | - | chr1_2:45649918-45649937 | Msa0072600:CDS | 25.0% |
! | AAAAAGATTATGAATTCGCA+GGG | - | chr1_2:45649919-45649938 | Msa0072600:CDS | 25.0% |
!!! | TTTCAGGTTTGGTATAATTT+TGG | + | chr1_2:45650301-45650320 | None:intergenic | 25.0% |
! | AAATTATACCAAACCTGAAA+TGG | - | chr1_2:45650301-45650320 | Msa0072600:CDS | 25.0% |
! | AATTATACCAAACCTGAAAT+GGG | - | chr1_2:45650302-45650321 | Msa0072600:CDS | 25.0% |
!! | GTTAGTTGTGAACATTTTAA+CGG | + | chr1_2:45650341-45650360 | None:intergenic | 25.0% |
! | TTAAAATGTTCACAACTAAC+TGG | - | chr1_2:45650341-45650360 | Msa0072600:CDS | 25.0% |
! | AATGACAATAATTAGATGTC+AGG | + | chr1_2:45650390-45650409 | None:intergenic | 25.0% |
! | TTGAATGTTATACTTATGGA+TGG | + | chr1_2:45650688-45650707 | None:intergenic | 25.0% |
!!! | TAGTTTTGTTTATGTGAAGT+AGG | + | chr1_2:45650905-45650924 | None:intergenic | 25.0% |
!! | ATAGAAGTTTAAAGTAGCTT+TGG | + | chr1_2:45651008-45651027 | None:intergenic | 25.0% |
! | AACTTCTATTCTCTGATTAA+TGG | - | chr1_2:45651019-45651038 | Msa0072600:CDS | 25.0% |
! | TACAAAATATCGTCAAACAA+CGG | + | chr1_2:45651508-45651527 | None:intergenic | 25.0% |
! | TCTTCAAATTTCATTATGCT+AGG | - | chr1_2:45651559-45651578 | Msa0072600:intron | 25.0% |
AAAACTCGTCGGAAAAATTT+AGG | - | chr1_2:45646673-45646692 | Msa0072600:intron | 30.0% | |
AAACTCGTCGGAAAAATTTA+GGG | - | chr1_2:45646674-45646693 | Msa0072600:intron | 30.0% | |
TGTTGGGGATGAATTTATAA+AGG | + | chr1_2:45646704-45646723 | None:intergenic | 30.0% | |
! | AGTTGGATCTCTTATTTGAA+TGG | - | chr1_2:45646977-45646996 | Msa0072600:intron | 30.0% |
! | GTTGGATCTCTTATTTGAAT+GGG | - | chr1_2:45646978-45646997 | Msa0072600:intron | 30.0% |
! | TTGGATCTCTTATTTGAATG+GGG | - | chr1_2:45646979-45646998 | Msa0072600:intron | 30.0% |
CAATAGATAAACATGTCATC+AGG | - | chr1_2:45647190-45647209 | Msa0072600:intron | 30.0% | |
TATGCATGATGTGAATATGT+AGG | + | chr1_2:45647883-45647902 | None:intergenic | 30.0% | |
!!! | TCACTTGATAGTGGATATTT+TGG | + | chr1_2:45648207-45648226 | None:intergenic | 30.0% |
! | ATAGGTATAAACTGGTCTAA+AGG | + | chr1_2:45648327-45648346 | None:intergenic | 30.0% |
TTAGGATGACTAGACTTTAA+TGG | + | chr1_2:45648609-45648628 | None:intergenic | 30.0% | |
TTATTCAACCTTCCACTAAA+GGG | - | chr1_2:45648715-45648734 | Msa0072600:intron | 30.0% | |
! | TTACCTGATTCTTTCTAGAA+TGG | + | chr1_2:45649494-45649513 | None:intergenic | 30.0% |
CAAAGGAATATTAAGACTCA+TGG | + | chr1_2:45649782-45649801 | None:intergenic | 30.0% | |
CATGAGTCTTAATATTCCTT+TGG | - | chr1_2:45649780-45649799 | Msa0072600:CDS | 30.0% | |
AAAAGATTATGAATTCGCAG+GGG | - | chr1_2:45649920-45649939 | Msa0072600:CDS | 30.0% | |
!! | TTATGCCATCATTTTTCAGA+TGG | + | chr1_2:45650251-45650270 | None:intergenic | 30.0% |
ATTATACCAAACCTGAAATG+GGG | - | chr1_2:45650303-45650322 | Msa0072600:CDS | 30.0% | |
AATGTCAATACTATCACTTC+TGG | - | chr1_2:45650472-45650491 | Msa0072600:CDS | 30.0% | |
! | AGGTTTAAAATATCCCTTTC+TGG | + | chr1_2:45650536-45650555 | None:intergenic | 30.0% |
! | ATTAACTGACCTCTTTTCAA+AGG | + | chr1_2:45650564-45650583 | None:intergenic | 30.0% |
AGTGACAAAACTGCATTATT+TGG | - | chr1_2:45650741-45650760 | Msa0072600:CDS | 30.0% | |
TGTACAACTAAAGGATGATA+AGG | - | chr1_2:45650948-45650967 | Msa0072600:CDS | 30.0% | |
!! | AGAATGAGTTTGCTGAATAA+TGG | - | chr1_2:45651118-45651137 | Msa0072600:intron | 30.0% |
TAGACTTGTAGTAAATGCAA+AGG | + | chr1_2:45651173-45651192 | None:intergenic | 30.0% | |
! | GAATAACAAGACTTTTGCTT+TGG | + | chr1_2:45651263-45651282 | None:intergenic | 30.0% |
! | CATGAAAGCATGATTAGAAT+CGG | + | chr1_2:45651285-45651304 | None:intergenic | 30.0% |
ATGCTTTCATGTATTCTTCT+TGG | - | chr1_2:45651294-45651313 | Msa0072600:intron | 30.0% | |
ATACTAACCTACTTTGTGTA+GGG | + | chr1_2:45651411-45651430 | None:intergenic | 30.0% | |
AATACTAACCTACTTTGTGT+AGG | + | chr1_2:45651412-45651431 | None:intergenic | 30.0% | |
CTACTATGTTATAGTGCTAT+AGG | - | chr1_2:45651471-45651490 | Msa0072600:intron | 30.0% | |
! | TAGGTTTTTGCAAACATGAA+GGG | - | chr1_2:45651578-45651597 | Msa0072600:CDS | 30.0% |
TCACATAATGTCATTGCTAT+TGG | + | chr1_2:45651618-45651637 | None:intergenic | 30.0% | |
AATAGCAATGACATTATGTG+AGG | - | chr1_2:45651617-45651636 | Msa0072600:CDS | 30.0% | |
TGAGAGAGAGGAAGAAAAAA+CGG | + | chr1_2:45646727-45646746 | None:intergenic | 35.0% | |
TAGTACTAACCAGTGAATGA+CGG | + | chr1_2:45646775-45646794 | None:intergenic | 35.0% | |
GAAGTTCATATGTCTCAATG+TGG | - | chr1_2:45646876-45646895 | Msa0072600:intron | 35.0% | |
! | AGTTGACAGTACTAGGTTTT+GGG | + | chr1_2:45647008-45647027 | None:intergenic | 35.0% |
TAGATAAACATGTCATCAGG+AGG | - | chr1_2:45647193-45647212 | Msa0072600:intron | 35.0% | |
ACATCTTTCCCCTTATCATT+GGG | + | chr1_2:45647229-45647248 | None:intergenic | 35.0% | |
AACATCTTTCCCCTTATCAT+TGG | + | chr1_2:45647230-45647249 | None:intergenic | 35.0% | |
ATACACAGCTGATGAAGTAT+GGG | + | chr1_2:45647500-45647519 | None:intergenic | 35.0% | |
! | TATCCTGATGGTGTATGTTT+CGG | + | chr1_2:45647544-45647563 | None:intergenic | 35.0% |
!! | TTTGTAGGTGGTGGATAAAT+AGG | + | chr1_2:45647577-45647596 | None:intergenic | 35.0% |
TGAGCATATGTATGAGAAGA+TGG | + | chr1_2:45647757-45647776 | None:intergenic | 35.0% | |
ATACACAGCTGATGAAGTAT+GGG | + | chr1_2:45647500-45647519 | None:intergenic | 35.0% | |
!! | TATGTAGGTGGTGGATAAAT+AGG | + | chr1_2:45647868-45647887 | None:intergenic | 35.0% |
! | TGTAATGGAAATTGGGTAGA+TGG | + | chr1_2:45648141-45648160 | None:intergenic | 35.0% |
TTTGAAGGTTCACTTGATAG+TGG | + | chr1_2:45648216-45648235 | None:intergenic | 35.0% | |
AAAGTAACTCGAGTAGTTTC+TGG | - | chr1_2:45648297-45648316 | Msa0072600:CDS | 35.0% | |
! | AGTAATGGAAATTGGGTAGA+TGG | + | chr1_2:45648423-45648442 | None:intergenic | 35.0% |
!! | TATGTAGGTGTTGGATATGT+CGG | + | chr1_2:45648504-45648523 | None:intergenic | 35.0% |
GGGATTAACATGTTTGATGA+TGG | - | chr1_2:45648684-45648703 | Msa0072600:intron | 35.0% | |
GTTATTCAACCTTCCACTAA+AGG | - | chr1_2:45648714-45648733 | Msa0072600:intron | 35.0% | |
! | TGTCTGTGGCTTTTTATGTT+GGG | + | chr1_2:45648868-45648887 | None:intergenic | 35.0% |
! | TTGTCTGTGGCTTTTTATGT+TGG | + | chr1_2:45648869-45648888 | None:intergenic | 35.0% |
AAAAGCCACAGACAAAATGT+AGG | - | chr1_2:45648874-45648893 | Msa0072600:intron | 35.0% | |
AAAGCCACAGACAAAATGTA+GGG | - | chr1_2:45648875-45648894 | Msa0072600:intron | 35.0% | |
! | TGACCTAAATGATGACGATA+GGG | - | chr1_2:45648902-45648921 | Msa0072600:intron | 35.0% |
CGATAGGGCAAAAAAATTCA+AGG | - | chr1_2:45648917-45648936 | Msa0072600:intron | 35.0% | |
! | AAATACAGGAGAAGTGTACA+TGG | - | chr1_2:45649036-45649055 | Msa0072600:CDS | 35.0% |
! | TGACTTGTCTGATATGTTGA+GGG | - | chr1_2:45649112-45649131 | Msa0072600:CDS | 35.0% |
GACTGTATGGCAAAGTTTAT+TGG | - | chr1_2:45649175-45649194 | Msa0072600:CDS | 35.0% | |
ATAGGTCAACTGAAAACTAG+CGG | + | chr1_2:45649213-45649232 | None:intergenic | 35.0% | |
!!! | GTTTCTCTTTTTTCTGGCAT+AGG | + | chr1_2:45649231-45649250 | None:intergenic | 35.0% |
TGCCAGAAAAAAGAGAAACA+TGG | - | chr1_2:45649232-45649251 | Msa0072600:intron | 35.0% | |
!!! | TGCCATGTTTCTCTTTTTTC+TGG | + | chr1_2:45649237-45649256 | None:intergenic | 35.0% |
AGAAACATGGCATCAAAGAA+AGG | - | chr1_2:45649245-45649264 | Msa0072600:intron | 35.0% | |
GAAACATGGCATCAAAGAAA+GGG | - | chr1_2:45649246-45649265 | Msa0072600:intron | 35.0% | |
AAACATGGCATCAAAGAAAG+GGG | - | chr1_2:45649247-45649266 | Msa0072600:intron | 35.0% | |
TATAGACTAAGAAGTCCAAG+AGG | - | chr1_2:45649400-45649419 | Msa0072600:CDS | 35.0% | |
TAAGGATACTCAGATCATGA+AGG | - | chr1_2:45649446-45649465 | Msa0072600:intron | 35.0% | |
! | TGACCATTCTAGAAAGAATC+AGG | - | chr1_2:45649488-45649507 | Msa0072600:intron | 35.0% |
! | TTCATTATAGGAGAAGTGTG+AGG | - | chr1_2:45649594-45649613 | Msa0072600:CDS | 35.0% |
TGTAGAACCTCAACCAAATT+GGG | + | chr1_2:45649850-45649869 | None:intergenic | 35.0% | |
TTGTAGAACCTCAACCAAAT+TGG | + | chr1_2:45649851-45649870 | None:intergenic | 35.0% | |
AAGATCCTGTTCGAAAACTA+CGG | - | chr1_2:45649890-45649909 | Msa0072600:CDS | 35.0% | |
AAAGATTATGAATTCGCAGG+GGG | - | chr1_2:45649921-45649940 | Msa0072600:CDS | 35.0% | |
ACGTCTGCAAAAAATGAAAG+AGG | - | chr1_2:45649987-45650006 | Msa0072600:CDS | 35.0% | |
AAATTATTCGCTCAAGACCA+TGG | - | chr1_2:45650039-45650058 | Msa0072600:CDS | 35.0% | |
AAAGTAGACTCATGATCAGA+GGG | + | chr1_2:45650084-45650103 | None:intergenic | 35.0% | |
!! | ATCATTTTTCAGATGGAAGG+GGG | + | chr1_2:45650244-45650263 | None:intergenic | 35.0% |
!! | CATCATTTTTCAGATGGAAG+GGG | + | chr1_2:45650245-45650264 | None:intergenic | 35.0% |
!! | CCATCATTTTTCAGATGGAA+GGG | + | chr1_2:45650246-45650265 | None:intergenic | 35.0% |
TTATACCAAACCTGAAATGG+GGG | - | chr1_2:45650304-45650323 | Msa0072600:CDS | 35.0% | |
!! | CTCAACTCTAAAATCATCTC+AGG | - | chr1_2:45650428-45650447 | Msa0072600:CDS | 35.0% |
AATCATCTCAGGTGTCAAAT+TGG | - | chr1_2:45650439-45650458 | Msa0072600:CDS | 35.0% | |
! | CTAGGTTTTTGCAAACATGA+AGG | - | chr1_2:45651577-45651596 | Msa0072600:CDS | 35.0% |
!! | GGCATTTTCATTTTTGCGAG+GGG | + | chr1_2:45646639-45646658 | None:intergenic | 40.0% |
!! | GGGCATTTTCATTTTTGCGA+GGG | + | chr1_2:45646640-45646659 | None:intergenic | 40.0% |
GCAAAAATGAAAATGCCCCT+CGG | - | chr1_2:45646642-45646661 | Msa0072600:three_prime_UTR | 40.0% | |
! | AGGAAGAAAAAACGGTGTTG+GGG | + | chr1_2:45646719-45646738 | None:intergenic | 40.0% |
GAGGAAGAAAAAACGGTGTT+GGG | + | chr1_2:45646720-45646739 | None:intergenic | 40.0% | |
AGAGGAAGAAAAAACGGTGT+TGG | + | chr1_2:45646721-45646740 | None:intergenic | 40.0% | |
GTAACTTGAGACAAGCTCAT+GGG | + | chr1_2:45646951-45646970 | None:intergenic | 40.0% | |
TCTCAAGTTACGAAGACAGT+TGG | - | chr1_2:45646960-45646979 | Msa0072600:intron | 40.0% | |
! | CAGTTGACAGTACTAGGTTT+TGG | + | chr1_2:45647009-45647028 | None:intergenic | 40.0% |
GATAGACAGTTGACAGTACT+AGG | + | chr1_2:45647015-45647034 | None:intergenic | 40.0% | |
AACTAACCCACCCAATGATA+AGG | - | chr1_2:45647216-45647235 | Msa0072600:intron | 40.0% | |
ACTAACCCACCCAATGATAA+GGG | - | chr1_2:45647217-45647236 | Msa0072600:intron | 40.0% | |
AACAGTAGGTCTAGTAGTAG+TGG | + | chr1_2:45647257-45647276 | None:intergenic | 40.0% | |
! | AGCTGGTCTAAAACATGTTG+AGG | + | chr1_2:45647313-45647332 | None:intergenic | 40.0% |
GTCTGTGTATCTTTAGTCAG+CGG | + | chr1_2:45647346-45647365 | None:intergenic | 40.0% | |
GCTGACTAAAGATACACAGA+CGG | - | chr1_2:45647345-45647364 | Msa0072600:intron | 40.0% | |
CTGACTAAAGATACACAGAC+GGG | - | chr1_2:45647346-45647365 | Msa0072600:intron | 40.0% | |
TGACTAAAGATACACAGACG+GGG | - | chr1_2:45647347-45647366 | Msa0072600:intron | 40.0% | |
ATGTTGCATCCACTACTACT+AGG | - | chr1_2:45647245-45647264 | Msa0072600:intron | 40.0% | |
GATACACAGCTGATGAAGTA+TGG | + | chr1_2:45647501-45647520 | None:intergenic | 40.0% | |
TACCACTAGTCATTCTCTCA+AGG | - | chr1_2:45647663-45647682 | Msa0072600:intron | 40.0% | |
TACCTTGAGAGAATGACTAG+TGG | + | chr1_2:45647668-45647687 | None:intergenic | 40.0% | |
ATCTGTGTATGTGCAGTTGT+CGG | + | chr1_2:45647733-45647752 | None:intergenic | 40.0% | |
GATACACAGCTGATGAAGTA+TGG | + | chr1_2:45647501-45647520 | None:intergenic | 40.0% | |
TATCCCGATGGTGTAAGTTT+CGG | + | chr1_2:45647835-45647854 | None:intergenic | 40.0% | |
TGATGTGAATATGTAGGTGG+TGG | + | chr1_2:45647877-45647896 | None:intergenic | 40.0% | |
GCATGATGTGAATATGTAGG+TGG | + | chr1_2:45647880-45647899 | None:intergenic | 40.0% | |
ACATCATGCATATGCTCCAT+CGG | - | chr1_2:45647891-45647910 | Msa0072600:intron | 40.0% | |
ACCACCTACAAATCCATTGT+CGG | - | chr1_2:45647921-45647940 | Msa0072600:intron | 40.0% | |
GCTAGAATGACTAGTGGTAA+TGG | + | chr1_2:45647998-45648017 | None:intergenic | 40.0% | |
TACCACTAGTCATTCTAGCA+AGG | - | chr1_2:45647999-45648018 | Msa0072600:intron | 40.0% | |
TACCTTGCTAGAATGACTAG+TGG | + | chr1_2:45648004-45648023 | None:intergenic | 40.0% | |
GATATCGCATCCACTACTAA+TGG | - | chr1_2:45648264-45648283 | Msa0072600:CDS | 40.0% | |
TCATCGGCATAGGTATAAAC+TGG | + | chr1_2:45648335-45648354 | None:intergenic | 40.0% | |
GTTTGTGTATGTGCAGTCAT+CGG | + | chr1_2:45648351-45648370 | None:intergenic | 40.0% | |
TGAGTATAGGTATGAGGAGA+TGG | + | chr1_2:45648375-45648394 | None:intergenic | 40.0% | |
TGCGGTGGATATACAAGTAA+TGG | + | chr1_2:45648438-45648457 | None:intergenic | 40.0% | |
!! | GATAGTGGATATGTAGGTGT+TGG | + | chr1_2:45648513-45648532 | None:intergenic | 40.0% |
!! | CCACTTGATAGTGGATATGT+AGG | + | chr1_2:45648519-45648538 | None:intergenic | 40.0% |
CCTACATATCCACTATCAAG+TGG | - | chr1_2:45648516-45648535 | Msa0072600:CDS | 40.0% | |
AATTGTGGTACCTTGTGTGA+AGG | + | chr1_2:45648543-45648562 | None:intergenic | 40.0% | |
TTGGGCATGGAACTAAATTG+TGG | + | chr1_2:45648558-45648577 | None:intergenic | 40.0% | |
CTTGTGTTCCTTGAAATCCT+GGG | + | chr1_2:45648581-45648600 | None:intergenic | 40.0% | |
TTCACAGACTTACCCTTTAG+TGG | + | chr1_2:45648730-45648749 | None:intergenic | 40.0% | |
! | GCTGAAATGCTTTTCGTCTT+CGG | + | chr1_2:45648834-45648853 | None:intergenic | 40.0% |
! | GTGACCTAAATGATGACGAT+AGG | - | chr1_2:45648901-45648920 | Msa0072600:intron | 40.0% |
TTGCCCTATCGTCATCATTT+AGG | + | chr1_2:45648908-45648927 | None:intergenic | 40.0% | |
! | GTGACTTGTCTGATATGTTG+AGG | - | chr1_2:45649111-45649130 | Msa0072600:CDS | 40.0% |
TTGAGGGAAGTTCGTCTTAA+GGG | - | chr1_2:45649128-45649147 | Msa0072600:CDS | 40.0% | |
GGCAAAGTTTATTGGAGCAT+TGG | - | chr1_2:45649183-45649202 | Msa0072600:CDS | 40.0% | |
TGATGGAACCTCTTTCTTGT+AGG | + | chr1_2:45649277-45649296 | None:intergenic | 40.0% | |
AACGCAACACGTAACTCAAA+TGG | - | chr1_2:45649301-45649320 | Msa0072600:intron | 40.0% | |
AAGAGGAGTTCAAACGTGAA+CGG | - | chr1_2:45649417-45649436 | Msa0072600:CDS | 40.0% | |
ACTCAGATCATGAAGGAAAC+TGG | - | chr1_2:45649453-45649472 | Msa0072600:intron | 40.0% | |
TATGAGTTGTAACCCTGCTA+AGG | - | chr1_2:45649663-45649682 | Msa0072600:CDS | 40.0% | |
GTGTAGTTGGAGGTAAGAAA+AGG | - | chr1_2:45649716-45649735 | Msa0072600:CDS | 40.0% | |
ATGCCGTCAACTACAAGAAA+GGG | - | chr1_2:45649755-45649774 | Msa0072600:CDS | 40.0% | |
GATGCTCTTGCATTATCCAA+AGG | + | chr1_2:45649799-45649818 | None:intergenic | 40.0% | |
! | AGTTTCCGTAGTTTTCGAAC+AGG | + | chr1_2:45649898-45649917 | None:intergenic | 40.0% |
CAAAGTAGACTCATGATCAG+AGG | + | chr1_2:45650085-45650104 | None:intergenic | 40.0% | |
CTCTGATCATGAGTCTACTT+TGG | - | chr1_2:45650083-45650102 | Msa0072600:CDS | 40.0% | |
TGATCATGAGTCTACTTTGG+TGG | - | chr1_2:45650086-45650105 | Msa0072600:CDS | 40.0% | |
GATCATGAGTCTACTTTGGT+GGG | - | chr1_2:45650087-45650106 | Msa0072600:CDS | 40.0% | |
! | GAAGCACCATCATTCATCAT+CGG | + | chr1_2:45650136-45650155 | None:intergenic | 40.0% |
!! | TCATTTTTCAGATGGAAGGG+GGG | + | chr1_2:45650243-45650262 | None:intergenic | 40.0% |
CCCTTCCATCTGAAAAATGA+TGG | - | chr1_2:45650243-45650262 | Msa0072600:CDS | 40.0% | |
!! | GCCATCATTTTTCAGATGGA+AGG | + | chr1_2:45650247-45650266 | None:intergenic | 40.0% |
TCAACTGCACTTTACCAGAA+AGG | - | chr1_2:45650519-45650538 | Msa0072600:CDS | 40.0% | |
CAACTGCACTTTACCAGAAA+GGG | - | chr1_2:45650520-45650539 | Msa0072600:CDS | 40.0% | |
! | ACCTCGATTCCTTTGAAAAG+AGG | - | chr1_2:45650552-45650571 | Msa0072600:CDS | 40.0% |
! | ACCTCTTTTCAAAGGAATCG+AGG | + | chr1_2:45650556-45650575 | None:intergenic | 40.0% |
GTGTAGGGTCTGTAAGTTTA+GGG | + | chr1_2:45651396-45651415 | None:intergenic | 40.0% | |
TGTGTAGGGTCTGTAAGTTT+AGG | + | chr1_2:45651397-45651416 | None:intergenic | 40.0% | |
TTACAGACCCTACACAAAGT+AGG | - | chr1_2:45651401-45651420 | Msa0072600:intron | 40.0% | |
! | GTTTTTGCAAACATGAAGGG+TGG | - | chr1_2:45651581-45651600 | Msa0072600:CDS | 40.0% |
!! | GGGGCATTTTCATTTTTGCG+AGG | + | chr1_2:45646641-45646660 | None:intergenic | 45.0% |
! | GAGTTTTTCACAGTTCCGAG+GGG | + | chr1_2:45646660-45646679 | None:intergenic | 45.0% |
! | CGAGTTTTTCACAGTTCCGA+GGG | + | chr1_2:45646661-45646680 | None:intergenic | 45.0% |
! | ACGAGTTTTTCACAGTTCCG+AGG | + | chr1_2:45646662-45646681 | None:intergenic | 45.0% |
CGGAACTGTGAAAAACTCGT+CGG | - | chr1_2:45646662-45646681 | Msa0072600:three_prime_UTR | 45.0% | |
GGGAGTGAAAAATGAGAGAG+AGG | + | chr1_2:45646739-45646758 | None:intergenic | 45.0% | |
AATGACGGCTACTGGAAGAA+GGG | + | chr1_2:45646760-45646779 | None:intergenic | 45.0% | |
CGTAACTTGAGACAAGCTCA+TGG | + | chr1_2:45646952-45646971 | None:intergenic | 45.0% | |
CTAACCCACCCAATGATAAG+GGG | - | chr1_2:45647218-45647237 | Msa0072600:intron | 45.0% | |
CTTTCCCCTTATCATTGGGT+GGG | + | chr1_2:45647225-45647244 | None:intergenic | 45.0% | |
TCTTTCCCCTTATCATTGGG+TGG | + | chr1_2:45647226-45647245 | None:intergenic | 45.0% | |
GTATCTTTAGTCAGCGGCAT+AGG | + | chr1_2:45647340-45647359 | None:intergenic | 45.0% | |
ACAGCTGATGAAGTATGGGT+AGG | + | chr1_2:45647496-45647515 | None:intergenic | 45.0% | |
TGTATGTTTCGGTGGTGCAT+AGG | + | chr1_2:45647533-45647552 | None:intergenic | 45.0% | |
!! | GTAGGTGGTGGATAAATAGG+TGG | + | chr1_2:45647574-45647593 | None:intergenic | 45.0% |
ACCACCTACAAATCCGTTGT+CGG | - | chr1_2:45647585-45647604 | Msa0072600:intron | 45.0% | |
GAGAGAATGACTAGTGGTAG+TGG | + | chr1_2:45647662-45647681 | None:intergenic | 45.0% | |
TTGTCGGTGCAGCTATACAT+TGG | + | chr1_2:45647717-45647736 | None:intergenic | 45.0% | |
ACAGCTGATGAAGTATGGGT+AGG | + | chr1_2:45647496-45647515 | None:intergenic | 45.0% | |
ACCACCGAAACTTACACCAT+CGG | - | chr1_2:45647828-45647847 | Msa0072600:intron | 45.0% | |
!! | GTAGGTGGTGGATAAATAGG+TGG | + | chr1_2:45647574-45647593 | None:intergenic | 45.0% |
! | GACAATGGATTTGTAGGTGG+TGG | + | chr1_2:45647922-45647941 | None:intergenic | 45.0% |
CCACCTACAAATCCATTGTC+GGG | - | chr1_2:45647922-45647941 | Msa0072600:intron | 45.0% | |
CATTCTAGCAAGGTAACTCC+TGG | - | chr1_2:45648009-45648028 | Msa0072600:intron | 45.0% | |
TCTGGAGAACTAGAAACTCC+AGG | + | chr1_2:45648030-45648049 | None:intergenic | 45.0% | |
GGCACAGGTATAAATTGGTC+TGG | + | chr1_2:45648048-45648067 | None:intergenic | 45.0% | |
TCGTCGGCACAGGTATAAAT+TGG | + | chr1_2:45648053-45648072 | None:intergenic | 45.0% | |
ATCTGTGTATGTGCAGTCGT+CGG | + | chr1_2:45648069-45648088 | None:intergenic | 45.0% | |
GATGGAGATTGAGAACTGGT+AGG | + | chr1_2:45648123-45648142 | None:intergenic | 45.0% | |
GGTAGATGGAGATTGAGAAC+TGG | + | chr1_2:45648127-45648146 | None:intergenic | 45.0% | |
GATGGTGCATAGGCATTTAG+TGG | + | chr1_2:45648171-45648190 | None:intergenic | 45.0% | |
AAGCGTCCACCTAGTGATAA+GGG | - | chr1_2:45648237-45648256 | Msa0072600:CDS | 45.0% | |
ATATCCTCCCCCTTATCACT+AGG | + | chr1_2:45648249-45648268 | None:intergenic | 45.0% | |
TGTGAAGGTCCACTTGATAG+TGG | + | chr1_2:45648528-45648547 | None:intergenic | 45.0% | |
ATCAAGTGGACCTTCACACA+AGG | - | chr1_2:45648530-45648549 | Msa0072600:CDS | 45.0% | |
GTTCCTTGAAATCCTGGGTT+GGG | + | chr1_2:45648576-45648595 | None:intergenic | 45.0% | |
TGTTCCTTGAAATCCTGGGT+TGG | + | chr1_2:45648577-45648596 | None:intergenic | 45.0% | |
CCTTGTGTTCCTTGAAATCC+TGG | + | chr1_2:45648582-45648601 | None:intergenic | 45.0% | |
CCAGGATTTCAAGGAACACA+AGG | - | chr1_2:45648579-45648598 | Msa0072600:CDS | 45.0% | |
AGATGGCATTCATGATGCTG+AGG | - | chr1_2:45648662-45648681 | Msa0072600:intron | 45.0% | |
GATGGCATTCATGATGCTGA+GGG | - | chr1_2:45648663-45648682 | Msa0072600:intron | 45.0% | |
ATGGCATTCATGATGCTGAG+GGG | - | chr1_2:45648664-45648683 | Msa0072600:intron | 45.0% | |
CAGACTTACCCTTTAGTGGA+AGG | + | chr1_2:45648726-45648745 | None:intergenic | 45.0% | |
!! | CTTTTCGTCTTCGGCTTTGA+AGG | + | chr1_2:45648825-45648844 | None:intergenic | 45.0% |
! | CCATCCCTACATTTTGTCTG+TGG | + | chr1_2:45648882-45648901 | None:intergenic | 45.0% |
CCACAGACAAAATGTAGGGA+TGG | - | chr1_2:45648879-45648898 | Msa0072600:intron | 45.0% | |
GTTGAGGGAAGTTCGTCTTA+AGG | - | chr1_2:45649127-45649146 | Msa0072600:CDS | 45.0% | |
ATTGGATAGGCGAGACTGTA+TGG | - | chr1_2:45649162-45649181 | Msa0072600:CDS | 45.0% | |
TACGTGTTGCGTTGTGTTGA+TGG | + | chr1_2:45649294-45649313 | None:intergenic | 45.0% | |
GTTCACGTTTGAACTCCTCT+TGG | + | chr1_2:45649418-45649437 | None:intergenic | 45.0% | |
AGAGGAGTTCAAACGTGAAC+GGG | - | chr1_2:45649418-45649437 | Msa0072600:CDS | 45.0% | |
! | AAACGTGAACGGGCTTCATA+AGG | - | chr1_2:45649428-45649447 | Msa0072600:CDS | 45.0% |
GCAGGGTTACAACTCATAGA+TGG | + | chr1_2:45649661-45649680 | None:intergenic | 45.0% | |
TACACCCGAACAAGTGGTAA+GGG | + | chr1_2:45649701-45649720 | None:intergenic | 45.0% | |
GATGCCGTCAACTACAAGAA+AGG | - | chr1_2:45649754-45649773 | Msa0072600:CDS | 45.0% | |
TGCCGTCAACTACAAGAAAG+GGG | - | chr1_2:45649756-45649775 | Msa0072600:CDS | 45.0% | |
! | ATCGTTAGCCTGTAGTGGTA+GGG | - | chr1_2:45649816-45649835 | Msa0072600:CDS | 45.0% |
! | TAGGGAGTTGGTTCCCAATT+TGG | - | chr1_2:45649834-45649853 | Msa0072600:CDS | 45.0% |
! | GTTGGTTCCCAATTTGGTTG+AGG | - | chr1_2:45649840-45649859 | Msa0072600:CDS | 45.0% |
AGGGGGAATTGCTGAAGAAA+CGG | - | chr1_2:45649938-45649957 | Msa0072600:CDS | 45.0% | |
ATTGCTGAAGAAACGGACAG+AGG | - | chr1_2:45649945-45649964 | Msa0072600:CDS | 45.0% | |
TTGCTGAAGAAACGGACAGA+GGG | - | chr1_2:45649946-45649965 | Msa0072600:CDS | 45.0% | |
TAGACTCATGATCAGAGGGT+TGG | + | chr1_2:45650080-45650099 | None:intergenic | 45.0% | |
GGCAATCAAGACGTTGATGT+TGG | - | chr1_2:45650108-45650127 | Msa0072600:CDS | 45.0% | |
!! | TTGGTGCCGATGATGAATGA+TGG | - | chr1_2:45650127-45650146 | Msa0072600:CDS | 45.0% |
ATCTCAGGTGTCAAATTGGC+AGG | - | chr1_2:45650443-45650462 | Msa0072600:CDS | 45.0% | |
! | TCGTCAAACAACGGCTTTTG+CGG | + | chr1_2:45651499-45651518 | None:intergenic | 45.0% |
!! | TATATAACATAAAATATAAT+AGG | + | chr1_2:45649014-45649033 | None:intergenic | 5.0% |
ATGACGGCTACTGGAAGAAG+GGG | + | chr1_2:45646759-45646778 | None:intergenic | 50.0% | |
GAATGACGGCTACTGGAAGA+AGG | + | chr1_2:45646761-45646780 | None:intergenic | 50.0% | |
TTCCAGTAGCCGTCATTCAC+TGG | - | chr1_2:45646763-45646782 | Msa0072600:intron | 50.0% | |
AACCAGTGAATGACGGCTAC+TGG | + | chr1_2:45646768-45646787 | None:intergenic | 50.0% | |
ACTCGAATTTCCTCGCGAGT+AGG | + | chr1_2:45647400-45647419 | None:intergenic | 50.0% | |
GTCTGTGTATGTGCAGTCGT+GGG | + | chr1_2:45647442-45647461 | None:intergenic | 50.0% | |
AGTCTGTGTATGTGCAGTCG+TGG | + | chr1_2:45647443-45647462 | None:intergenic | 50.0% | |
GGAGCATATGTACGAGGAGA+TGG | + | chr1_2:45647466-45647485 | None:intergenic | 50.0% | |
GATGAAGTATGGGTAGGTGG+AGG | + | chr1_2:45647490-45647509 | None:intergenic | 50.0% | |
GCTGATGAAGTATGGGTAGG+TGG | + | chr1_2:45647493-45647512 | None:intergenic | 50.0% | |
! | CCTGATGGTGTATGTTTCGG+TGG | + | chr1_2:45647541-45647560 | None:intergenic | 50.0% |
CCACCGAAACATACACCATC+AGG | - | chr1_2:45647538-45647557 | Msa0072600:intron | 50.0% | |
GGTGGTTGTGTGTATCCTGA+TGG | + | chr1_2:45647556-45647575 | None:intergenic | 50.0% | |
! | GACAACGGATTTGTAGGTGG+TGG | + | chr1_2:45647586-45647605 | None:intergenic | 50.0% |
CCACCTACAAATCCGTTGTC+GGG | - | chr1_2:45647586-45647605 | Msa0072600:intron | 50.0% | |
TGTGAAAGTCCACCCGACAA+CGG | + | chr1_2:45647601-45647620 | None:intergenic | 50.0% | |
! | CGGGTGGACTTTCACACAAA+CGG | - | chr1_2:45647605-45647624 | Msa0072600:intron | 50.0% |
AAACGGCCAGTCAGTGGTAA+GGG | - | chr1_2:45647622-45647641 | Msa0072600:intron | 50.0% | |
GATGAAGTATGGGTAGGTGG+AGG | + | chr1_2:45647490-45647509 | None:intergenic | 50.0% | |
GCTGATGAAGTATGGGTAGG+TGG | + | chr1_2:45647493-45647512 | None:intergenic | 50.0% | |
GGTGGTGCATATGCATGTTG+TGG | + | chr1_2:45647814-45647833 | None:intergenic | 50.0% | |
CCACCGAAACTTACACCATC+GGG | - | chr1_2:45647829-45647848 | Msa0072600:intron | 50.0% | |
! | CCCGACAATGGATTTGTAGG+TGG | + | chr1_2:45647925-45647944 | None:intergenic | 50.0% |
! | CCACCCGACAATGGATTTGT+AGG | + | chr1_2:45647928-45647947 | None:intergenic | 50.0% |
CCTACAAATCCATTGTCGGG+TGG | - | chr1_2:45647925-45647944 | Msa0072600:intron | 50.0% | |
TGTAAAGGTCCACCCGACAA+TGG | + | chr1_2:45647937-45647956 | None:intergenic | 50.0% | |
GGAACATAGGTACGAGGAGA+TGG | + | chr1_2:45648093-45648112 | None:intergenic | 50.0% | |
GATTGAGAACTGGTAGGTGG+AGG | + | chr1_2:45648117-45648136 | None:intergenic | 50.0% | |
GGAGATTGAGAACTGGTAGG+TGG | + | chr1_2:45648120-45648139 | None:intergenic | 50.0% | |
TGCGTATGTCGATGGTGCAT+AGG | + | chr1_2:45648181-45648200 | None:intergenic | 50.0% | |
TTTGGCAGTGCGTATGTCGA+TGG | + | chr1_2:45648189-45648208 | None:intergenic | 50.0% | |
CTAGGTGGACGCTTCTTTGA+AGG | + | chr1_2:45648231-45648250 | None:intergenic | 50.0% | |
! | GAAGCGTCCACCTAGTGATA+AGG | - | chr1_2:45648236-45648255 | Msa0072600:CDS | 50.0% |
AGCGTCCACCTAGTGATAAG+GGG | - | chr1_2:45648238-45648257 | Msa0072600:CDS | 50.0% | |
GCGAGAACGACCATTAGTAG+TGG | + | chr1_2:45648277-45648296 | None:intergenic | 50.0% | |
GTATGTGCAGTCATCGGCAT+AGG | + | chr1_2:45648345-45648364 | None:intergenic | 50.0% | |
GGAGGCTGAGTATAGGTATG+AGG | + | chr1_2:45648381-45648400 | None:intergenic | 50.0% | |
GGTAGATGGAGACTGAGAAC+GGG | + | chr1_2:45648409-45648428 | None:intergenic | 50.0% | |
GGGTAGATGGAGACTGAGAA+CGG | + | chr1_2:45648410-45648429 | None:intergenic | 50.0% | |
ACCGCATACATATGCACCAC+CGG | - | chr1_2:45648452-45648471 | Msa0072600:CDS | 50.0% | |
!! | GTAGGTGTTGGATATGTCGG+CGG | + | chr1_2:45648501-45648520 | None:intergenic | 50.0% |
! | TTTAGTTCCATGCCCAACCC+AGG | - | chr1_2:45648561-45648580 | Msa0072600:CDS | 50.0% |
! | TTGAAATCCTGGGTTGGGCA+TGG | + | chr1_2:45648571-45648590 | None:intergenic | 50.0% |
ATGCCCAACCCAGGATTTCA+AGG | - | chr1_2:45648570-45648589 | Msa0072600:CDS | 50.0% | |
TCTTGACCAGCCTGATAAGG+CGG | + | chr1_2:45648645-45648664 | None:intergenic | 50.0% | |
CCATCTTGACCAGCCTGATA+AGG | + | chr1_2:45648648-45648667 | None:intergenic | 50.0% | |
! | CCTTATCAGGCTGGTCAAGA+TGG | - | chr1_2:45648645-45648664 | Msa0072600:intron | 50.0% |
CATATCAGACAAGTCACGCG+AGG | + | chr1_2:45649108-45649127 | None:intergenic | 50.0% | |
TTAAGGGTCAGTGCCCACAT+TGG | - | chr1_2:45649144-45649163 | Msa0072600:CDS | 50.0% | |
CAGTCTCGCCTATCCAATGT+GGG | + | chr1_2:45649160-45649179 | None:intergenic | 50.0% | |
ACAGTCTCGCCTATCCAATG+TGG | + | chr1_2:45649161-45649180 | None:intergenic | 50.0% | |
GGGGAAAGCCTACAAGAAAG+AGG | - | chr1_2:45649266-45649285 | Msa0072600:intron | 50.0% | |
! | TATAGGAGAAGTGTGAGGCG+AGG | - | chr1_2:45649599-45649618 | Msa0072600:CDS | 50.0% |
GGGCAACAACATCCTTAGCA+GGG | + | chr1_2:45649678-45649697 | None:intergenic | 50.0% | |
ACACCCGAACAAGTGGTAAG+GGG | + | chr1_2:45649700-45649719 | None:intergenic | 50.0% | |
CTACACCCGAACAAGTGGTA+AGG | + | chr1_2:45649702-45649721 | None:intergenic | 50.0% | |
ACCACTTGTTCGGGTGTAGT+TGG | - | chr1_2:45649703-45649722 | Msa0072600:CDS | 50.0% | |
TCCAACTACACCCGAACAAG+TGG | + | chr1_2:45649707-45649726 | None:intergenic | 50.0% | |
ACTTGTTCGGGTGTAGTTGG+AGG | - | chr1_2:45649706-45649725 | Msa0072600:CDS | 50.0% | |
GGCCCCTTTCTTGTAGTTGA+CGG | + | chr1_2:45649761-45649780 | None:intergenic | 50.0% | |
!! | AGAGCATCGTTAGCCTGTAG+TGG | - | chr1_2:45649811-45649830 | Msa0072600:CDS | 50.0% |
! | CATCGTTAGCCTGTAGTGGT+AGG | - | chr1_2:45649815-45649834 | Msa0072600:CDS | 50.0% |
AACCAACTCCCTACCACTAC+AGG | + | chr1_2:45649827-45649846 | None:intergenic | 50.0% | |
TGCTGAAGAAACGGACAGAG+GGG | - | chr1_2:45649947-45649966 | Msa0072600:CDS | 50.0% | |
ACTCATGATCAGAGGGTTGG+AGG | + | chr1_2:45650077-45650096 | None:intergenic | 50.0% | |
!! | CTCTTCCCCCATTTCAGGTT+TGG | + | chr1_2:45650312-45650331 | None:intergenic | 50.0% |
CAAACCTGAAATGGGGGAAG+AGG | - | chr1_2:45650310-45650329 | Msa0072600:CDS | 50.0% | |
AGATCCTCTTCCCCCATTTC+AGG | + | chr1_2:45650317-45650336 | None:intergenic | 50.0% | |
GTCTGATGCAGACAGTACAG+CGG | + | chr1_2:45650773-45650792 | None:intergenic | 50.0% | |
TGTCTGCATCAGACATACGC+TGG | - | chr1_2:45650779-45650798 | Msa0072600:CDS | 50.0% | |
TTGCGAGTGCGCTCAACAGT+AGG | + | chr1_2:45647271-45647290 | None:intergenic | 55.0% | |
TCAGCGGCATAGGTACAAGC+TGG | + | chr1_2:45647330-45647349 | None:intergenic | 55.0% | |
GCGAGTAGGCCTAGTAGTAG+TGG | + | chr1_2:45647386-45647405 | None:intergenic | 55.0% | |
TACTACTAGGCCTACTCGCG+AGG | - | chr1_2:45647387-45647406 | Msa0072600:intron | 55.0% | |
GTATGTGCAGTCGTGGGCAT+AGG | + | chr1_2:45647436-45647455 | None:intergenic | 55.0% | |
GAAGTATGGGTAGGTGGAGG+CGG | + | chr1_2:45647487-45647506 | None:intergenic | 55.0% | |
GGTGGTGCATAGGCATGTTG+TGG | + | chr1_2:45647523-45647542 | None:intergenic | 55.0% | |
! | CCCGACAACGGATTTGTAGG+TGG | + | chr1_2:45647589-45647608 | None:intergenic | 55.0% |
! | CCACCCGACAACGGATTTGT+AGG | + | chr1_2:45647592-45647611 | None:intergenic | 55.0% |
CCTACAAATCCGTTGTCGGG+TGG | - | chr1_2:45647589-45647608 | Msa0072600:intron | 55.0% | |
TCACACAAACGGCCAGTCAG+TGG | - | chr1_2:45647616-45647635 | Msa0072600:intron | 55.0% | |
CAAACGGCCAGTCAGTGGTA+AGG | - | chr1_2:45647621-45647640 | Msa0072600:intron | 55.0% | |
AACGGCCAGTCAGTGGTAAG+GGG | - | chr1_2:45647623-45647642 | Msa0072600:intron | 55.0% | |
CCAGTCAGTGGTAAGGGGAA+GGG | - | chr1_2:45647628-45647647 | Msa0072600:intron | 55.0% | |
! | AGTGGTAAGGGGAAGGGTGT+CGG | - | chr1_2:45647634-45647653 | Msa0072600:intron | 55.0% |
CCCGATGGTGTAAGTTTCGG+TGG | + | chr1_2:45647832-45647851 | None:intergenic | 55.0% | |
!! | GTAGGTGGTGGATTCACCGA+TGG | + | chr1_2:45647910-45647929 | None:intergenic | 55.0% |
CGGGTGGACCTTTACACAAG+CGG | - | chr1_2:45647941-45647960 | Msa0072600:intron | 55.0% | |
ACACCCTTCCCCTTACCACT+GGG | + | chr1_2:45647634-45647653 | None:intergenic | 55.0% | |
! | AGTGGTAAGGGGAAGGGTGT+CGG | - | chr1_2:45647634-45647653 | Msa0072600:intron | 55.0% |
GGAGGTGGAACATAGGTACG+AGG | + | chr1_2:45648099-45648118 | None:intergenic | 55.0% | |
GGTAGGTGGAGGTGGAACAT+AGG | + | chr1_2:45648106-45648125 | None:intergenic | 55.0% | |
TGAGAACTGGTAGGTGGAGG+TGG | + | chr1_2:45648114-45648133 | None:intergenic | 55.0% | |
GCGTCCACCTAGTGATAAGG+GGG | - | chr1_2:45648239-45648258 | Msa0072600:CDS | 55.0% | |
TCCACCTAGTGATAAGGGGG+AGG | - | chr1_2:45648242-45648261 | Msa0072600:CDS | 55.0% | |
TCCTCCCCCTTATCACTAGG+TGG | + | chr1_2:45648246-45648265 | None:intergenic | 55.0% | |
GGTAGGTGGAGGCTGAGTAT+AGG | + | chr1_2:45648388-45648407 | None:intergenic | 55.0% | |
GATGGAGACTGAGAACGGGT+AGG | + | chr1_2:45648405-45648424 | None:intergenic | 55.0% | |
GGTGGTGCATATGTATGCGG+TGG | + | chr1_2:45648453-45648472 | None:intergenic | 55.0% | |
GCCGGTGGTGCATATGTATG+CGG | + | chr1_2:45648456-45648475 | None:intergenic | 55.0% | |
GATGTCGACGGTGTATACGC+CGG | + | chr1_2:45648474-45648493 | None:intergenic | 55.0% | |
TGTTGGATATGTCGGCGGTG+CGG | + | chr1_2:45648496-45648515 | None:intergenic | 55.0% | |
TGATAAGGCGGACGCTGAGA+TGG | + | chr1_2:45648633-45648652 | None:intergenic | 55.0% | |
ATCTCAGCGTCCGCCTTATC+AGG | - | chr1_2:45648632-45648651 | Msa0072600:CDS | 55.0% | |
GGTCAGTGCCCACATTGGAT+AGG | - | chr1_2:45649149-45649168 | Msa0072600:CDS | 55.0% | |
GGGGCAACAACATCCTTAGC+AGG | + | chr1_2:45649679-45649698 | None:intergenic | 55.0% | |
TGCCCCCCTTACCACTTGTT+CGG | - | chr1_2:45649693-45649712 | Msa0072600:CDS | 55.0% | |
ACCCGAACAAGTGGTAAGGG+GGG | + | chr1_2:45649698-45649717 | None:intergenic | 55.0% | |
CACCCGAACAAGTGGTAAGG+GGG | + | chr1_2:45649699-45649718 | None:intergenic | 55.0% | |
AGCCTGTAGTGGTAGGGAGT+TGG | - | chr1_2:45649822-45649841 | Msa0072600:CDS | 55.0% | |
CATGATCAGAGGGTTGGAGG+CGG | + | chr1_2:45650074-45650093 | None:intergenic | 55.0% | |
CTGTTGAGCGCACTCGCAAG+TGG | - | chr1_2:45647272-45647291 | Msa0072600:intron | 60.0% | |
TCGCAAGTGGCGCACTCATC+TGG | - | chr1_2:45647285-45647304 | Msa0072600:intron | 60.0% | |
GGAGGCGGAGCATATGTACG+AGG | + | chr1_2:45647472-45647491 | None:intergenic | 60.0% | |
GCCAGTCAGTGGTAAGGGGA+AGG | - | chr1_2:45647627-45647646 | Msa0072600:intron | 60.0% | |
CCCTTCCCCTTACCACTGAC+TGG | + | chr1_2:45647631-45647650 | None:intergenic | 60.0% | |
GGTGGCAGTGTGTATCCCGA+TGG | + | chr1_2:45647847-45647866 | None:intergenic | 60.0% | |
CTGGGTGGCCGCTTGTGTAA+AGG | + | chr1_2:45647952-45647971 | None:intergenic | 60.0% | |
TTACACAAGCGGCCACCCAG+TGG | - | chr1_2:45647952-45647971 | Msa0072600:intron | 60.0% | |
AAGCGGCCACCCAGTGGTAA+GGG | - | chr1_2:45647958-45647977 | Msa0072600:intron | 60.0% | |
CCACCCAGTGGTAAGGGGAA+GGG | - | chr1_2:45647964-45647983 | Msa0072600:intron | 60.0% | |
GACACCCTTCCCCTTACCAC+TGG | + | chr1_2:45647635-45647654 | None:intergenic | 60.0% | |
GTATGTGCAGTCGTCGGCAC+AGG | + | chr1_2:45648063-45648082 | None:intergenic | 60.0% | |
GACTGAGAACGGGTAGGTGG+AGG | + | chr1_2:45648399-45648418 | None:intergenic | 60.0% | |
GGAGACTGAGAACGGGTAGG+TGG | + | chr1_2:45648402-45648421 | None:intergenic | 60.0% | |
GCCCCCCTTACCACTTGTTC+GGG | - | chr1_2:45649694-45649713 | Msa0072600:CDS | 60.0% | |
CAAGCGGCCACCCAGTGGTA+AGG | - | chr1_2:45647957-45647976 | Msa0072600:intron | 65.0% | |
AGCGGCCACCCAGTGGTAAG+GGG | - | chr1_2:45647959-45647978 | Msa0072600:intron | 65.0% | |
GCCACCCAGTGGTAAGGGGA+AGG | - | chr1_2:45647963-45647982 | Msa0072600:intron | 65.0% | |
CCCTTCCCCTTACCACTGGG+TGG | + | chr1_2:45647967-45647986 | None:intergenic | 65.0% | |
GTCGACGGTGTATACGCCGG+TGG | + | chr1_2:45648471-45648490 | None:intergenic | 65.0% | |
GGCGGACGCTGAGATGGCTT+AGG | + | chr1_2:45648627-45648646 | None:intergenic | 65.0% | |
CAGCGTCCGCCTTATCAGGC+TGG | - | chr1_2:45648636-45648655 | Msa0072600:CDS | 65.0% | |
GATCAGAGGGTTGGAGGCGG+CGG | + | chr1_2:45650071-45650090 | None:intergenic | 65.0% | |
GTCGGCGGTGCGGATGTCGA+CGG | + | chr1_2:45648486-45648505 | None:intergenic | 70.0% | |
GGAGGCGGCGGTGACGTCCA+TGG | + | chr1_2:45650059-45650078 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 45646594 | 45651670 | 45646594 | ID=Msa0072600;Name=Msa0072600 |
chr1_2 | mRNA | 45646594 | 45651670 | 45646594 | ID=Msa0072600-mRNA-1;Parent=Msa0072600;Name=Msa0072600-mRNA-1;_AED=0.24;_eAED=0.11;_QI=0|0.85|0.75|1|0.57|0.5|8|201|900 |
chr1_2 | exon | 45646594 | 45646683 | 45646594 | ID=Msa0072600-mRNA-1:exon:13809;Parent=Msa0072600-mRNA-1 |
chr1_2 | exon | 45647691 | 45647799 | 45647691 | ID=Msa0072600-mRNA-1:exon:13808;Parent=Msa0072600-mRNA-1 |
chr1_2 | exon | 45648116 | 45648660 | 45648116 | ID=Msa0072600-mRNA-1:exon:13807;Parent=Msa0072600-mRNA-1 |
chr1_2 | exon | 45648755 | 45648859 | 45648755 | ID=Msa0072600-mRNA-1:exon:13806;Parent=Msa0072600-mRNA-1 |
chr1_2 | exon | 45648942 | 45649220 | 45648942 | ID=Msa0072600-mRNA-1:exon:13805;Parent=Msa0072600-mRNA-1 |
chr1_2 | exon | 45649317 | 45649449 | 45649317 | ID=Msa0072600-mRNA-1:exon:13804;Parent=Msa0072600-mRNA-1 |
chr1_2 | exon | 45649528 | 45651068 | 45649528 | ID=Msa0072600-mRNA-1:exon:13803;Parent=Msa0072600-mRNA-1 |
chr1_2 | exon | 45651569 | 45651670 | 45651569 | ID=Msa0072600-mRNA-1:exon:13802;Parent=Msa0072600-mRNA-1 |
chr1_2 | CDS | 45651569 | 45651670 | 45651569 | ID=Msa0072600-mRNA-1:cds;Parent=Msa0072600-mRNA-1 |
chr1_2 | CDS | 45649528 | 45651068 | 45649528 | ID=Msa0072600-mRNA-1:cds;Parent=Msa0072600-mRNA-1 |
chr1_2 | CDS | 45649317 | 45649449 | 45649317 | ID=Msa0072600-mRNA-1:cds;Parent=Msa0072600-mRNA-1 |
chr1_2 | CDS | 45648942 | 45649220 | 45648942 | ID=Msa0072600-mRNA-1:cds;Parent=Msa0072600-mRNA-1 |
chr1_2 | CDS | 45648755 | 45648859 | 45648755 | ID=Msa0072600-mRNA-1:cds;Parent=Msa0072600-mRNA-1 |
chr1_2 | CDS | 45648118 | 45648660 | 45648118 | ID=Msa0072600-mRNA-1:cds;Parent=Msa0072600-mRNA-1 |
chr1_2 | three_prime_UTR | 45648116 | 45648117 | 45648116 | ID=Msa0072600-mRNA-1:three_prime_utr;Parent=Msa0072600-mRNA-1 |
chr1_2 | three_prime_UTR | 45647691 | 45647799 | 45647691 | ID=Msa0072600-mRNA-1:three_prime_utr;Parent=Msa0072600-mRNA-1 |
chr1_2 | three_prime_UTR | 45646594 | 45646683 | 45646594 | ID=Msa0072600-mRNA-1:three_prime_utr;Parent=Msa0072600-mRNA-1 |
Gene Sequence |
Protein sequence |