AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0415160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0415160 MtrunA17_Chr3g0109051 95.402 435 17 1 1 432 1 435 0.0 786
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0415160 AT5G16620.1 54.565 460 166 10 1 430 1 447 1.90e-131 386

Find 124 sgRNAs with CRISPR-Local

Find 491 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACTCCGTTTCGTTGATTT+TGG 0.129563 3_2:+61222067 Msa0415160:five_prime_UTR
ACCATACCTCCTTATCATTT+TGG 0.162044 3_2:-61228722 None:intergenic
ATATACAATCTCAACTATTT+TGG 0.169924 3_2:-61229108 None:intergenic
AATCAACGAAACGGAGTAAA+AGG 0.206556 3_2:-61222063 None:intergenic
TTCCCCAAAACCTTTGCTTT+TGG 0.215480 3_2:+61222128 Msa0415160:CDS
AGAAGTCATTTCAAAGATTA+TGG 0.238456 3_2:+61228532 Msa0415160:CDS
AGAAGAAAGCCTTTCACTTT+TGG 0.242737 3_2:+61222180 Msa0415160:CDS
TTCTGCTGCACAGTTTCTTC+TGG 0.245558 3_2:-61225518 None:intergenic
TTATCTGTATGTCACAATTA+TGG 0.247506 3_2:-61229032 None:intergenic
CTAGAGGGTCGCCGCTCTTT+TGG 0.251110 3_2:+61223712 Msa0415160:intron
ATCTCTTCATTAGATCAAAT+TGG 0.251155 3_2:+61228497 Msa0415160:intron
CCTGATGTTAAACAACAATT+TGG 0.258702 3_2:+61228351 Msa0415160:CDS
GTTTAACATCAGGACTATTA+AGG 0.265236 3_2:-61228341 None:intergenic
AAGATGGAGGTGGTGATAAC+TGG 0.269317 3_2:-61223517 None:intergenic
GAATTACATTTGAAGGTAGA+AGG 0.280899 3_2:-61227023 None:intergenic
ATCTTTGAAATGACTTCTTC+GGG 0.302432 3_2:-61228527 None:intergenic
AATCTTTGAAATGACTTCTT+CGG 0.305276 3_2:-61228528 None:intergenic
GCCTTGATTAATTTGTTTGT+TGG 0.320161 3_2:+61228888 Msa0415160:exon
TCATCTTTAACATTGATGTC+TGG 0.329458 3_2:-61224415 None:intergenic
GAGCTCTTCCCCGGGGTGTC+AGG 0.345471 3_2:+61228862 Msa0415160:CDS
TTACTGAAGGCTTCTCAAAA+TGG 0.347654 3_2:+61225677 Msa0415160:intron
TGTCCCAAAAGCAAAGGTTT+TGG 0.360372 3_2:-61222132 None:intergenic
TAACATTGATGTCTGGGCCT+GGG 0.364105 3_2:-61224408 None:intergenic
CTTCTTCCTCTCATGTTACC+AGG 0.382539 3_2:+61222226 Msa0415160:CDS
GAATCGCCAAAACCTTGGTT+AGG 0.388655 3_2:-61225707 None:intergenic
GATAGGGAAATCAGTCTTAT+CGG 0.394782 3_2:+61226327 Msa0415160:intron
TCTCACCAAAATCTAAAATC+TGG 0.411193 3_2:+61222261 Msa0415160:CDS
CATCTTTAACATTGATGTCT+GGG 0.413063 3_2:-61224414 None:intergenic
TTTGGATTGGTGTTGGTGTT+GGG 0.414245 3_2:+61223730 Msa0415160:CDS
GTTAAGAGAATTACATTTGA+AGG 0.420217 3_2:-61227030 None:intergenic
GAAAGGAGATCCAGGGGAAA+AGG 0.420348 3_2:-61224248 None:intergenic
ATGATAGCTGCTTGAACTCT+AGG 0.421480 3_2:-61228587 None:intergenic
GCAGCAGGCCCTGGTGGTGT+AGG 0.421863 3_2:-61224283 None:intergenic
TGAAAAGCCATGGCAACATC+AGG 0.432003 3_2:-61228560 None:intergenic
TGGTATTTAGCAATATTCAT+TGG 0.436322 3_2:-61228702 None:intergenic
CCAAATTGTTGTTTAACATC+AGG 0.438878 3_2:-61228351 None:intergenic
GGAAAGGGGAAAGGAGATCC+AGG 0.442142 3_2:-61224256 None:intergenic
AAAATATCTGAGCTCTTCCC+CGG 0.442345 3_2:+61228853 Msa0415160:CDS
ACAGGTAGCTTCAAGATTGA+AGG 0.442422 3_2:+61223877 Msa0415160:intron
GGTGGTGTAGGCATTGGAAA+GGG 0.453571 3_2:-61224271 None:intergenic
TAGAGTTCAAGCAGCTATCA+TGG 0.454291 3_2:+61228589 Msa0415160:CDS
TGACGCATCAAGTTCATTCA+AGG 0.461157 3_2:+61225565 Msa0415160:CDS
TTAACATTGATGTCTGGGCC+TGG 0.464648 3_2:-61224409 None:intergenic
AACATTGATGTCTGGGCCTG+GGG 0.470604 3_2:-61224407 None:intergenic
ATCTCATTGCTCGTCACTAA+AGG 0.471715 3_2:-61228930 None:intergenic
AGATGGAGGTGGTGATAACT+GGG 0.473602 3_2:-61223516 None:intergenic
TTAGCGGGTGCAGCAGGCCC+TGG 0.474715 3_2:-61224292 None:intergenic
TGAGTACTGTTGTTTGCGGT+AGG 0.475420 3_2:-61221983 None:intergenic
TGTATTCATCTGGCCCATCA+TGG 0.476081 3_2:-61224200 None:intergenic
TTTCCAATGCCTACACCACC+AGG 0.476221 3_2:+61224274 Msa0415160:CDS
CAAGGCTGGCCTGACACCCC+GGG 0.482492 3_2:-61228871 None:intergenic
GAAAAGGCACCACTGTCAAA+TGG 0.483131 3_2:-61224232 None:intergenic
TCAAGGCTGGCCTGACACCC+CGG 0.494700 3_2:-61228872 None:intergenic
AGACTTGAGAGTGGCGTAGT+GGG 0.496069 3_2:-61222010 None:intergenic
GGCCCTGGTGGTGTAGGCAT+TGG 0.496472 3_2:-61224277 None:intergenic
GTAGAATTAGCGGGTGCAGC+AGG 0.500448 3_2:-61224298 None:intergenic
TGCTAAATACCAAAATGATA+AGG 0.501507 3_2:+61228713 Msa0415160:CDS
CATGGGTGGAAGCACTGAAT+GGG 0.502644 3_2:+61228284 Msa0415160:CDS
TAAACCATCTTCTGCACAGT+TGG 0.509673 3_2:-61226379 None:intergenic
AAACCATCTTCTGCACAGTT+GGG 0.513822 3_2:-61226378 None:intergenic
AAATATCTGAGCTCTTCCCC+GGG 0.513824 3_2:+61228854 Msa0415160:CDS
GAAGGGTTCCTCATCTCCTC+AGG 0.521165 3_2:-61227005 None:intergenic
ACATGGGTGGAAGCACTGAA+TGG 0.523691 3_2:+61228283 Msa0415160:CDS
TGAATGGGACAGTCGAATGA+TGG 0.524565 3_2:+61228299 Msa0415160:CDS
ACCAACAAACAAATTAATCA+AGG 0.525827 3_2:-61228889 None:intergenic
AATCGCCAAAACCTTGGTTA+GGG 0.525969 3_2:-61225706 None:intergenic
GAGTACTGTTGTTTGCGGTA+GGG 0.526270 3_2:-61221982 None:intergenic
TCAAGTTGTTGACGATACTC+AGG 0.527223 3_2:-61227438 None:intergenic
TTCTTCCTCTCATGTTACCA+GGG 0.530542 3_2:+61222227 Msa0415160:CDS
TGCTCATGACTGTATACTAC+AGG 0.534871 3_2:+61228994 Msa0415160:three_prime_UTR
GGCCAATCCTGATGTTGCCA+TGG 0.534946 3_2:+61228553 Msa0415160:CDS
CAAGCTTTCAAGACCATGAT+GGG 0.535142 3_2:+61224187 Msa0415160:CDS
TATGATTACACAGTCGAAGA+TGG 0.535467 3_2:-61223533 None:intergenic
AGCCATGGCAACATCAGGAT+TGG 0.535702 3_2:-61228555 None:intergenic
GTAGGCATTGGAAAGGGGAA+AGG 0.535843 3_2:-61224265 None:intergenic
AGTCAAGAAACAACATCAGT+TGG 0.538654 3_2:+61223485 Msa0415160:CDS
ACAAACAAATTAATCAAGGC+TGG 0.540529 3_2:-61228885 None:intergenic
CGAGTACTTGTAGAATTAGC+GGG 0.541877 3_2:-61224307 None:intergenic
AATTACATTTGAAGGTAGAA+GGG 0.544985 3_2:-61227022 None:intergenic
AAGGCTTTCTTCTTGTGAAG+AGG 0.547042 3_2:-61222170 None:intergenic
ATCAACGAAACGGAGTAAAA+GGG 0.554957 3_2:-61222062 None:intergenic
GGACCCAACTGTGCAGAAGA+TGG 0.556423 3_2:+61226375 Msa0415160:CDS
CCGGAGAATCGCCAAAACCT+TGG 0.557778 3_2:-61225712 None:intergenic
ACAAGCTTTCAAGACCATGA+TGG 0.559229 3_2:+61224186 Msa0415160:CDS
TTACGTGCAGATTGAGAACC+CGG 0.570932 3_2:-61225731 None:intergenic
GAGACTTGAGAGTGGCGTAG+TGG 0.571290 3_2:-61222011 None:intergenic
GCTATTTACCTGAGGAGATG+AGG 0.573622 3_2:+61226997 Msa0415160:intron
GTGAGATTTAGAAGCAACCC+TGG 0.578922 3_2:-61222244 None:intergenic
GTGAATCTCCCAAAAGTGAA+AGG 0.581583 3_2:-61222189 None:intergenic
AGTTTGAGTACTGTTGTTTG+CGG 0.582986 3_2:-61221987 None:intergenic
TCGCCAAAACCTTGGTTAGG+GGG 0.589507 3_2:-61225704 None:intergenic
CGATCCATCCAATAAAGTTG+CGG 0.597846 3_2:+61221945 None:intergenic
ACAAAAGTAGAAGCATCCCC+AGG 0.600187 3_2:+61224391 Msa0415160:CDS
GACTGTATACTACAGGCTCA+TGG 0.600637 3_2:+61229001 Msa0415160:three_prime_UTR
GGATGCTTTAGAGAAAATGA+TGG 0.601657 3_2:+61226351 Msa0415160:CDS
TCGAGTACTTGTAGAATTAG+CGG 0.601726 3_2:-61224308 None:intergenic
TGGTGGTGTAGGCATTGGAA+AGG 0.602470 3_2:-61224272 None:intergenic
GCGGGTGCAGCAGGCCCTGG+TGG 0.606201 3_2:-61224289 None:intergenic
AGGTATGTCTACTGTGACAG+TGG 0.607559 3_2:-61224365 None:intergenic
TACACAGTCGAAGATGGAGG+TGG 0.613224 3_2:-61223527 None:intergenic
ATCGCCAAAACCTTGGTTAG+GGG 0.619666 3_2:-61225705 None:intergenic
GAAGAATGTCCCAAAAGCAA+AGG 0.621236 3_2:-61222138 None:intergenic
GTGGTGTAGGCATTGGAAAG+GGG 0.622133 3_2:-61224270 None:intergenic
TAAATACCAAAATGATAAGG+AGG 0.626637 3_2:+61228716 Msa0415160:CDS
ACATGAACTACTATGCAACA+AGG 0.632469 3_2:+61229297 Msa0415160:three_prime_UTR
CATGAACTACTATGCAACAA+GGG 0.632595 3_2:+61229298 Msa0415160:three_prime_UTR
TGTTTCAGAAACAACATGGG+TGG 0.635175 3_2:+61228270 Msa0415160:intron
GAAGAGAAGAGACTTGAGAG+TGG 0.642826 3_2:-61222019 None:intergenic
CTGTTGCAGCTATTTACCTG+AGG 0.645530 3_2:+61226989 Msa0415160:intron
TGCTTTAGAGAAAATGATGG+AGG 0.646175 3_2:+61226354 Msa0415160:CDS
AGCAACCCTGGTAACATGAG+AGG 0.647956 3_2:-61222232 None:intergenic
AGGGAAATCAGTCTTATCGG+TGG 0.657965 3_2:+61226330 Msa0415160:intron
GAAAGGGGAAAGGAGATCCA+GGG 0.661185 3_2:-61224255 None:intergenic
CAAAATAATCCATTTGACAG+TGG 0.665538 3_2:+61224223 Msa0415160:CDS
TTCCAATGCCTACACCACCA+GGG 0.666256 3_2:+61224275 Msa0415160:CDS
ATGGAGGTGGTGATAACTGG+GGG 0.672674 3_2:-61223514 None:intergenic
AAGGCTGGCCTGACACCCCG+GGG 0.676232 3_2:-61228870 None:intergenic
GATTACACAGTCGAAGATGG+AGG 0.680478 3_2:-61223530 None:intergenic
CCAACACCAATCCAAAAGAG+CGG 0.686796 3_2:-61223723 None:intergenic
ATGCTGGGAATACAGTGCAG+GGG 0.702895 3_2:+61223420 Msa0415160:intron
CATACAGATAATAATAACTG+TGG 0.708668 3_2:+61229044 Msa0415160:three_prime_UTR
GATGGAGGTGGTGATAACTG+GGG 0.716112 3_2:-61223515 None:intergenic
AAAGGGGAAAGGAGATCCAG+GGG 0.729197 3_2:-61224254 None:intergenic
AATATCTGAGCTCTTCCCCG+GGG 0.732010 3_2:+61228855 Msa0415160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAAATTTAAGTTGAAT+TGG + chr3_2:61222507-61222526 Msa0415160:intron 10.0%
!! ATAAGCAAAAAAAAAATAAA+TGG + chr3_2:61225002-61225021 Msa0415160:intron 10.0%
!!! ATTTGATATTTTTATTTTTG+AGG + chr3_2:61229136-61229155 Msa0415160:three_prime_UTR 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:61228067-61228086 Msa0415160:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:61228067-61228086 Msa0415160:intron 100.0%
!!! AATTTTACTCATATTATGTT+AGG + chr3_2:61222705-61222724 Msa0415160:intron 15.0%
!!! ATTTTACTCATATTATGTTA+GGG + chr3_2:61222706-61222725 Msa0415160:intron 15.0%
!! TATTTATGTTCAATACATTA+AGG + chr3_2:61223836-61223855 Msa0415160:intron 15.0%
!! ATTTATGTTCAATACATTAA+GGG + chr3_2:61223837-61223856 Msa0415160:intron 15.0%
!! AATGTTGAAATTGTATAAAA+AGG - chr3_2:61224131-61224150 None:intergenic 15.0%
!!! TAATTTATCTTCATGTTTTT+AGG - chr3_2:61224643-61224662 None:intergenic 15.0%
!! TTACCAGTTATAAATAATAA+AGG - chr3_2:61224706-61224725 None:intergenic 15.0%
!!! CTTTTTGTTTACATAAAATT+AGG + chr3_2:61224923-61224942 Msa0415160:intron 15.0%
!!! ACATTGTTATTACTTAATAA+GGG - chr3_2:61225654-61225673 None:intergenic 15.0%
!!! TACATTGTTATTACTTAATA+AGG - chr3_2:61225655-61225674 None:intergenic 15.0%
!!! TTCTTTGAAATTAATTTCTT+AGG + chr3_2:61226062-61226081 Msa0415160:intron 15.0%
!!! AGTTAATTTATACCATTTTT+TGG + chr3_2:61226199-61226218 Msa0415160:intron 15.0%
!!! AGTAATAATAATTTGAAACA+TGG - chr3_2:61227530-61227549 None:intergenic 15.0%
!!! AAATCTTTGAAAATAGAAAA+TGG - chr3_2:61227638-61227657 None:intergenic 15.0%
!!! TACTCTTTTTAAAGTTAAAT+TGG + chr3_2:61227979-61227998 Msa0415160:intron 15.0%
!! ATGTAAAATGTTAGAAAATA+AGG - chr3_2:61228476-61228495 None:intergenic 15.0%
!!! AATTACCAGATTTTAGATTT+TGG - chr3_2:61222269-61222288 None:intergenic 20.0%
!!! AAAATCTGGTAATTTTTTTG+TGG + chr3_2:61222275-61222294 Msa0415160:intron 20.0%
!!! ATTTGAAATTGAAGTTGAAT+TGG + chr3_2:61222401-61222420 Msa0415160:intron 20.0%
!!! TTTGAAATTGAAGTTGAATT+GGG + chr3_2:61222402-61222421 Msa0415160:intron 20.0%
!!! AAAATTTAAGTTGAATTGGT+AGG + chr3_2:61222511-61222530 Msa0415160:intron 20.0%
!! AGTAAAATTTGACTGAATTA+GGG - chr3_2:61222694-61222713 None:intergenic 20.0%
!! ATAGTAAGTGGTTAAATATA+GGG + chr3_2:61222738-61222757 Msa0415160:intron 20.0%
!! ATAGTAAGTTGTTAAAGTTT+AGG + chr3_2:61222770-61222789 Msa0415160:intron 20.0%
!! TAGTAAGTTGTTAAAGTTTA+GGG + chr3_2:61222771-61222790 Msa0415160:intron 20.0%
!!! TTTGAAATATTCATAACTTC+AGG + chr3_2:61222982-61223001 Msa0415160:intron 20.0%
!! TTGAAATATTCATAACTTCA+GGG + chr3_2:61222983-61223002 Msa0415160:intron 20.0%
!! ACAAATTGAATGTATTTCAA+TGG + chr3_2:61223363-61223382 Msa0415160:intron 20.0%
!! GAAAAAATTAACACAGTATA+CGG - chr3_2:61223804-61223823 None:intergenic 20.0%
!!! GCTATTTTATTTTTTTTGAC+AGG + chr3_2:61223859-61223878 Msa0415160:intron 20.0%
!! TTATAAATAATAAAGGCGAA+TGG - chr3_2:61224699-61224718 None:intergenic 20.0%
!! TATTTATAACTGGTAAATTG+AGG + chr3_2:61224710-61224729 Msa0415160:intron 20.0%
!! ATTTATAACTGGTAAATTGA+GGG + chr3_2:61224711-61224730 Msa0415160:intron 20.0%
!!! ATTGTCTATTTGAAACATAA+AGG - chr3_2:61224807-61224826 None:intergenic 20.0%
!! TTGTTGTATTGTGTTTATTT+GGG - chr3_2:61224846-61224865 None:intergenic 20.0%
!!! TTTGTTGTATTGTGTTTATT+TGG - chr3_2:61224847-61224866 None:intergenic 20.0%
!!! TAGTAAAAAAAAAGCTTTAG+TGG + chr3_2:61224975-61224994 Msa0415160:intron 20.0%
!! AAAAATCACAAAACATCTTT+AGG - chr3_2:61225627-61225646 None:intergenic 20.0%
!!! TCTATTCAAGCTTAATTTTA+AGG + chr3_2:61225828-61225847 Msa0415160:intron 20.0%
!! GAACAATCATTTATTTAACA+GGG - chr3_2:61225885-61225904 None:intergenic 20.0%
!! TGAACAATCATTTATTTAAC+AGG - chr3_2:61225886-61225905 None:intergenic 20.0%
!! AATGATTGTTCATGTTATTA+TGG + chr3_2:61225894-61225913 Msa0415160:intron 20.0%
!! CATAATTGTCGAATTTATAA+AGG + chr3_2:61225941-61225960 Msa0415160:intron 20.0%
!!! AGAGTATCATATTTCTTAAT+AGG + chr3_2:61226031-61226050 Msa0415160:intron 20.0%
!! AAAAAAGAAGCTAATATTAC+GGG - chr3_2:61226405-61226424 None:intergenic 20.0%
!! GAAAAAAGAAGCTAATATTA+CGG - chr3_2:61226406-61226425 None:intergenic 20.0%
!! AACATACTTATACAATATCA+TGG - chr3_2:61226549-61226568 None:intergenic 20.0%
!!! ATTGGAAATTTGTTCATTAT+GGG - chr3_2:61226853-61226872 None:intergenic 20.0%
!!! AAAATTTATGAGCTTTCTTT+TGG - chr3_2:61226964-61226983 None:intergenic 20.0%
!!! AAAAGAAAGCTCATAAATTT+TGG + chr3_2:61226963-61226982 Msa0415160:intron 20.0%
!!! AAAGAAAGCTCATAAATTTT+GGG + chr3_2:61226964-61226983 Msa0415160:intron 20.0%
!! TGTACAATATTGTCTATATA+CGG + chr3_2:61227197-61227216 Msa0415160:intron 20.0%
!! TATATACGGCAAATTTATAT+GGG + chr3_2:61227211-61227230 Msa0415160:intron 20.0%
!! ATTAAAAGTGAAAACAGAAA+AGG - chr3_2:61227589-61227608 None:intergenic 20.0%
!!! CTATTTTCAAAGATTTGTAT+AGG + chr3_2:61227642-61227661 Msa0415160:intron 20.0%
!! AAACACAAAATAATGTGAAA+AGG + chr3_2:61227773-61227792 Msa0415160:intron 20.0%
!!! TGCATTTTTCAGTAATATAT+TGG + chr3_2:61228189-61228208 Msa0415160:intron 20.0%
!!! ATTAAGGTCGAAATTTTTTA+AGG - chr3_2:61228328-61228347 None:intergenic 20.0%
!!! CTGATTTTTTTGTTTTGTTT+TGG + chr3_2:61228659-61228678 Msa0415160:intron 20.0%
!!! ATATACAATCTCAACTATTT+TGG - chr3_2:61229111-61229130 None:intergenic 20.0%
!!! TAATTTGTACTTCAGTTTTA+AGG + chr3_2:61229215-61229234 Msa0415160:three_prime_UTR 20.0%
! TAAAAGGGTTTGAAAAATTG+GGG - chr3_2:61222050-61222069 None:intergenic 25.0%
! GTAAAAGGGTTTGAAAAATT+GGG - chr3_2:61222051-61222070 None:intergenic 25.0%
! AGTAAAAGGGTTTGAAAAAT+TGG - chr3_2:61222052-61222071 None:intergenic 25.0%
! TTAGTAGAAACAGAATCATT+AGG + chr3_2:61222349-61222368 Msa0415160:intron 25.0%
!!! GAATTTGAGTTTTACTTACT+AGG + chr3_2:61222457-61222476 Msa0415160:intron 25.0%
! TTTGAATATTTATAACCGCA+TGG - chr3_2:61222667-61222686 None:intergenic 25.0%
! GAGTAAAATTTGACTGAATT+AGG - chr3_2:61222695-61222714 None:intergenic 25.0%
! GATAGTAAGTGGTTAAATAT+AGG + chr3_2:61222737-61222756 Msa0415160:intron 25.0%
! ATAGCTAGTAGTTAAGTATA+GGG + chr3_2:61222804-61222823 Msa0415160:intron 25.0%
! TGAAATACATTCAATTTGTG+TGG - chr3_2:61223362-61223381 None:intergenic 25.0%
! TTCTACTAACTGTATGATAT+TGG + chr3_2:61223951-61223970 Msa0415160:intron 25.0%
! TCTACTAACTGTATGATATT+GGG + chr3_2:61223952-61223971 Msa0415160:intron 25.0%
! CAACTTCATGTAAAATTTGA+AGG - chr3_2:61224035-61224054 None:intergenic 25.0%
!!! GATTATTTTGTGTATTCATC+TGG - chr3_2:61224213-61224232 None:intergenic 25.0%
! TCATCCAACAAGAAAAAAAT+GGG - chr3_2:61224499-61224518 None:intergenic 25.0%
!!! ATCTGTGGTTTTAAGAATTT+AGG + chr3_2:61224573-61224592 Msa0415160:intron 25.0%
! TCGCCTTTATTATTTATAAC+TGG + chr3_2:61224700-61224719 Msa0415160:intron 25.0%
! AAGTAAAACGAACTGAAATT+TGG - chr3_2:61224890-61224909 None:intergenic 25.0%
! AAAGCTTAAAAATAATGCAG+TGG - chr3_2:61225153-61225172 None:intergenic 25.0%
!! AAACAGTTGATGTCTATTTA+GGG - chr3_2:61225215-61225234 None:intergenic 25.0%
!! AAAACAGTTGATGTCTATTT+AGG - chr3_2:61225216-61225235 None:intergenic 25.0%
! AAATTTCACGCAAATTAGTA+GGG - chr3_2:61225443-61225462 None:intergenic 25.0%
! AAAATTTCACGCAAATTAGT+AGG - chr3_2:61225444-61225463 None:intergenic 25.0%
! ACAACAAAAAAATATGCATC+AGG - chr3_2:61225476-61225495 None:intergenic 25.0%
!!! GAATGCTTTTGAAAGATTTA+AGG + chr3_2:61225538-61225557 Msa0415160:CDS 25.0%
! ATAACAATGTACATTACTGA+AGG + chr3_2:61225664-61225683 Msa0415160:intron 25.0%
!! TTACATATCTGCTTTATTAC+CGG + chr3_2:61225782-61225801 Msa0415160:intron 25.0%
! ATTGTTCATGTTATTATGGT+TGG + chr3_2:61225898-61225917 Msa0415160:intron 25.0%
! GAGAATAAAATAATGCTTCT+AGG - chr3_2:61226159-61226178 None:intergenic 25.0%
! TATTCTCTGATTGACATTAT+AGG + chr3_2:61226172-61226191 Msa0415160:intron 25.0%
! GTTACATGATAACCAAAAAA+TGG - chr3_2:61226214-61226233 None:intergenic 25.0%
!! AATGTGACCTTGTTTATATT+TGG + chr3_2:61226305-61226324 Msa0415160:intron 25.0%
!! ACCTTGTTTATATTTGGATA+GGG + chr3_2:61226311-61226330 Msa0415160:intron 25.0%
! TGATAATCATTAACTGCAAA+AGG - chr3_2:61226451-61226470 None:intergenic 25.0%
!!! AGGATAAGTTCTAAACTTTA+AGG + chr3_2:61226491-61226510 Msa0415160:intron 25.0%
!! GTATAAGTATGTTGTTTAGT+CGG + chr3_2:61226556-61226575 Msa0415160:intron 25.0%
! TTCAATATGAAAATGCAGAA+TGG - chr3_2:61226659-61226678 None:intergenic 25.0%
! TAAACGAAGTTAATTGGAAA+GGG - chr3_2:61226738-61226757 None:intergenic 25.0%
! TTTGTTCATTATGGGAAAAT+AGG - chr3_2:61226845-61226864 None:intergenic 25.0%
!! CATTGGAAATTTGTTCATTA+TGG - chr3_2:61226854-61226873 None:intergenic 25.0%
! AATTACATTTGAAGGTAGAA+GGG - chr3_2:61227025-61227044 None:intergenic 25.0%
! GTTAAGAGAATTACATTTGA+AGG - chr3_2:61227033-61227052 None:intergenic 25.0%
! CTATATACGGCAAATTTATA+TGG + chr3_2:61227210-61227229 Msa0415160:intron 25.0%
! AAAGCTTCCATTACATTATA+TGG - chr3_2:61227260-61227279 None:intergenic 25.0%
!! TCTTTGAAAATAGAAAATGG+AGG - chr3_2:61227635-61227654 None:intergenic 25.0%
! CTATTATCAAAGATTTCCAT+AGG + chr3_2:61227709-61227728 Msa0415160:intron 25.0%
!!! ATTCTTTTATTTGCTTCCTA+TGG - chr3_2:61227728-61227747 None:intergenic 25.0%
! AGTGAAAATAACAGATGAAA+AGG + chr3_2:61227815-61227834 Msa0415160:intron 25.0%
! CGAAGAAAAAAAAAAACGAA+AGG + chr3_2:61227848-61227867 Msa0415160:intron 25.0%
!! TCTACAAAAACTATTTTCTC+TGG + chr3_2:61227926-61227945 Msa0415160:intron 25.0%
! TATTGGTATATAGTATCCTT+TGG + chr3_2:61228206-61228225 Msa0415160:intron 25.0%
!!! TTTTGTTTCAGAAACAACAT+GGG + chr3_2:61228267-61228286 Msa0415160:intron 25.0%
! ATCTCTTCATTAGATCAAAT+TGG + chr3_2:61228497-61228516 Msa0415160:intron 25.0%
!!! AATCTTTGAAATGACTTCTT+CGG - chr3_2:61228531-61228550 None:intergenic 25.0%
! AGAAGTCATTTCAAAGATTA+TGG + chr3_2:61228532-61228551 Msa0415160:CDS 25.0%
! TGGTATTTAGCAATATTCAT+TGG - chr3_2:61228705-61228724 None:intergenic 25.0%
! TGCTAAATACCAAAATGATA+AGG + chr3_2:61228713-61228732 Msa0415160:CDS 25.0%
! TAAATACCAAAATGATAAGG+AGG + chr3_2:61228716-61228735 Msa0415160:CDS 25.0%
! ACCAACAAACAAATTAATCA+AGG - chr3_2:61228892-61228911 None:intergenic 25.0%
!! AGTTTTGCCAATTTTTCTTA+TGG - chr3_2:61228973-61228992 None:intergenic 25.0%
! TTATCTGTATGTCACAATTA+TGG - chr3_2:61229035-61229054 None:intergenic 25.0%
! CATACAGATAATAATAACTG+TGG + chr3_2:61229044-61229063 Msa0415160:three_prime_UTR 25.0%
!! AGTACAAATTAGCGAATTTT+AGG - chr3_2:61229206-61229225 None:intergenic 25.0%
! TCTCACCAAAATCTAAAATC+TGG + chr3_2:61222261-61222280 Msa0415160:CDS 30.0%
TAGGTTATGATGTAGTTCAA+TGG + chr3_2:61222476-61222495 Msa0415160:intron 30.0%
GATAGCTAGTAGTTAAGTAT+AGG + chr3_2:61222803-61222822 Msa0415160:intron 30.0%
AACCCTAGTAGGTTAAATAA+AGG + chr3_2:61222923-61222942 Msa0415160:intron 30.0%
ACCCTAGTAGGTTAAATAAA+GGG + chr3_2:61222924-61222943 Msa0415160:intron 30.0%
! TCCCTTTATTTAACCTACTA+GGG - chr3_2:61222928-61222947 None:intergenic 30.0%
! TTTGACACTTTAAGAGAGTT+AGG + chr3_2:61222953-61222972 Msa0415160:intron 30.0%
! TTGACACTTTAAGAGAGTTA+GGG + chr3_2:61222954-61222973 Msa0415160:intron 30.0%
! CAAATTAGTCTGACTTTGTA+AGG - chr3_2:61223023-61223042 None:intergenic 30.0%
CTTACAAAGTCAGACTAATT+TGG + chr3_2:61223021-61223040 Msa0415160:intron 30.0%
! TATGCTATGTTGAGATTTTC+AGG + chr3_2:61223093-61223112 Msa0415160:intron 30.0%
! ATGCTATGTTGAGATTTTCA+GGG + chr3_2:61223094-61223113 Msa0415160:intron 30.0%
! TTGAAACTGATTGCATTTTG+AGG + chr3_2:61223241-61223260 Msa0415160:intron 30.0%
! GTGGAAATTTTCATTAATCG+CGG - chr3_2:61223343-61223362 None:intergenic 30.0%
! TTTGTTCACTACATTTCTAG+AGG + chr3_2:61223696-61223715 Msa0415160:intron 30.0%
! TTGTTCACTACATTTCTAGA+GGG + chr3_2:61223697-61223716 Msa0415160:intron 30.0%
TTGTCAAACCTTATCTTATG+TGG + chr3_2:61224061-61224080 Msa0415160:intron 30.0%
CAAAGAATCCACATAAGATA+AGG - chr3_2:61224072-61224091 None:intergenic 30.0%
CAAAATAATCCATTTGACAG+TGG + chr3_2:61224223-61224242 Msa0415160:CDS 30.0%
CATCTTTAACATTGATGTCT+GGG - chr3_2:61224417-61224436 None:intergenic 30.0%
TCATCTTTAACATTGATGTC+TGG - chr3_2:61224418-61224437 None:intergenic 30.0%
!!! TGTACGTTACCTGATTTTTT+GGG - chr3_2:61224460-61224479 None:intergenic 30.0%
!!! TTGTACGTTACCTGATTTTT+TGG - chr3_2:61224461-61224480 None:intergenic 30.0%
GTCATCCAACAAGAAAAAAA+TGG - chr3_2:61224500-61224519 None:intergenic 30.0%
CTACATGTGCAATTTATAAG+TGG + chr3_2:61224525-61224544 Msa0415160:intron 30.0%
!! AATAAAGGCGAATGGATTTT+TGG - chr3_2:61224691-61224710 None:intergenic 30.0%
AAAGTGAGTGTAAATTAGCA+AGG - chr3_2:61224773-61224792 None:intergenic 30.0%
TCATGGCAATAAAGATTTCT+CGG - chr3_2:61225072-61225091 None:intergenic 30.0%
ATGTATAACTAGTCATCATG+TGG + chr3_2:61225249-61225268 Msa0415160:intron 30.0%
CTTCCATGCTTGTATTATTT+GGG + chr3_2:61225278-61225297 Msa0415160:intron 30.0%
AGCAAGGTTGAGAAAAAAAT+AGG - chr3_2:61225326-61225345 None:intergenic 30.0%
!!! AGTTTTTTATCCAGCTGTAA+TGG + chr3_2:61225377-61225396 Msa0415160:intron 30.0%
AATTTCACGCAAATTAGTAG+GGG - chr3_2:61225442-61225461 None:intergenic 30.0%
TAAGCTTGAATAGATGTATC+AGG - chr3_2:61225822-61225841 None:intergenic 30.0%
AATCATTTATTTAACAGGGC+TGG - chr3_2:61225881-61225900 None:intergenic 30.0%
TATGACATTATTTCAACCCA+GGG - chr3_2:61226118-61226137 None:intergenic 30.0%
TTATGACATTATTTCAACCC+AGG - chr3_2:61226119-61226138 None:intergenic 30.0%
! GACCTTGTTTATATTTGGAT+AGG + chr3_2:61226310-61226329 Msa0415160:intron 30.0%
TCCCTATCCAAATATAAACA+AGG - chr3_2:61226315-61226334 None:intergenic 30.0%
! TTTTCCATTTGTAGTGAATG+AGG + chr3_2:61226471-61226490 Msa0415160:intron 30.0%
TTATCCTCATTCACTACAAA+TGG - chr3_2:61226478-61226497 None:intergenic 30.0%
! AAGAATTCAAACAGAAGCAT+TGG - chr3_2:61226715-61226734 None:intergenic 30.0%
GTAAACGAAGTTAATTGGAA+AGG - chr3_2:61226739-61226758 None:intergenic 30.0%
TGGATGTAAACGAAGTTAAT+TGG - chr3_2:61226744-61226763 None:intergenic 30.0%
! AAACCTAACACGCTATATTT+TGG - chr3_2:61226764-61226783 None:intergenic 30.0%
GAATTACATTTGAAGGTAGA+AGG - chr3_2:61227026-61227045 None:intergenic 30.0%
! TTATTAGTTTAGTACGTTCG+TGG + chr3_2:61227126-61227145 Msa0415160:intron 30.0%
ACAATGAATAAGCTCAAATG+TGG - chr3_2:61227169-61227188 None:intergenic 30.0%
ACCAGTACCATATAATGTAA+TGG + chr3_2:61227250-61227269 Msa0415160:intron 30.0%
TCCATTACATTATATGGTAC+TGG - chr3_2:61227254-61227273 None:intergenic 30.0%
ACATGCAATGTTAATGAGTT+TGG + chr3_2:61227363-61227382 Msa0415160:intron 30.0%
ATGTTAATGAGTTTGGCAAA+TGG + chr3_2:61227370-61227389 Msa0415160:intron 30.0%
CACAAAATAATGTGAAAAGG+TGG + chr3_2:61227776-61227795 Msa0415160:intron 30.0%
!!! TTTTTTTTCTTCGCAAAGAC+AGG - chr3_2:61227841-61227860 None:intergenic 30.0%
TGCTTACATACATGATACAT+TGG + chr3_2:61227890-61227909 Msa0415160:intron 30.0%
! AAACTATTTTCTCTGGTGAA+TGG + chr3_2:61227933-61227952 Msa0415160:intron 30.0%
! TAAAGTTAAATTGGTAGTCC+TGG + chr3_2:61227988-61228007 Msa0415160:intron 30.0%
TATGAATCTCTATAAGCCAA+AGG - chr3_2:61228225-61228244 None:intergenic 30.0%
!! GTTTCTGAAACAAAAGATGT+AGG - chr3_2:61228262-61228281 None:intergenic 30.0%
!! CTTTTGTTTCAGAAACAACA+TGG + chr3_2:61228266-61228285 Msa0415160:intron 30.0%
GTTTAACATCAGGACTATTA+AGG - chr3_2:61228344-61228363 None:intergenic 30.0%
!! CCAAATTGTTGTTTAACATC+AGG - chr3_2:61228354-61228373 None:intergenic 30.0%
CCTGATGTTAAACAACAATT+TGG + chr3_2:61228351-61228370 Msa0415160:CDS 30.0%
! GATCAATTTGTTCATGCTTT+AGG + chr3_2:61228430-61228449 Msa0415160:intron 30.0%
GTTAGAAAATAAGGAGAATG+TGG - chr3_2:61228467-61228486 None:intergenic 30.0%
!! ATCTTTGAAATGACTTCTTC+GGG - chr3_2:61228530-61228549 None:intergenic 30.0%
AATGTCAGATTCAACATACA+GGG - chr3_2:61228795-61228814 None:intergenic 30.0%
AAATGTCAGATTCAACATAC+AGG - chr3_2:61228796-61228815 None:intergenic 30.0%
TTTCTTCCTCTTTACATTTC+AGG + chr3_2:61228813-61228832 Msa0415160:intron 30.0%
ACAAACAAATTAATCAAGGC+TGG - chr3_2:61228888-61228907 None:intergenic 30.0%
!! GCCTTGATTAATTTGTTTGT+TGG + chr3_2:61228888-61228907 Msa0415160:exon 30.0%
!! ATTAGCGAATTTTAGGAACT+CGG - chr3_2:61229199-61229218 None:intergenic 30.0%
CCTTAAAAAATGAATGCGAA+CGG + chr3_2:61229240-61229259 Msa0415160:three_prime_UTR 30.0%
! AGTTTGAGTACTGTTGTTTG+CGG - chr3_2:61221990-61222009 None:intergenic 35.0%
ATCAACGAAACGGAGTAAAA+GGG - chr3_2:61222065-61222084 None:intergenic 35.0%
AATCAACGAAACGGAGTAAA+AGG - chr3_2:61222066-61222085 None:intergenic 35.0%
!!! TTACTCCGTTTCGTTGATTT+TGG + chr3_2:61222067-61222086 Msa0415160:five_prime_UTR 35.0%
!!! TACTCCGTTTCGTTGATTTT+GGG + chr3_2:61222068-61222087 Msa0415160:five_prime_UTR 35.0%
!! TTGATTTTGGGGGTTTCAAA+TGG + chr3_2:61222080-61222099 Msa0415160:exon 35.0%
!!! TCTTGTGAAGAGGTTTTTTG+AGG - chr3_2:61222163-61222182 None:intergenic 35.0%
! AGAAGAAAGCCTTTCACTTT+TGG + chr3_2:61222180-61222199 Msa0415160:CDS 35.0%
!! GAAGAAAGCCTTTCACTTTT+GGG + chr3_2:61222181-61222200 Msa0415160:CDS 35.0%
! GGGACTAAATTGATAGTAAG+TGG + chr3_2:61222726-61222745 Msa0415160:intron 35.0%
! GTCCCTTTATTTAACCTACT+AGG - chr3_2:61222929-61222948 None:intergenic 35.0%
! CTCTCTTAAAGTGTCAAAGT+TGG - chr3_2:61222951-61222970 None:intergenic 35.0%
ACAAAGTCAGACTAATTTGG+TGG + chr3_2:61223024-61223043 Msa0415160:intron 35.0%
! TGCTATGTTGAGATTTTCAG+GGG + chr3_2:61223095-61223114 Msa0415160:intron 35.0%
TGTCTCTGTAAAGTCTAAAG+TGG + chr3_2:61223190-61223209 Msa0415160:intron 35.0%
AGTCATAAGTAACACATGCT+GGG + chr3_2:61223405-61223424 Msa0415160:intron 35.0%
AGTCAAGAAACAACATCAGT+TGG + chr3_2:61223485-61223504 Msa0415160:CDS 35.0%
TATGATTACACAGTCGAAGA+TGG - chr3_2:61223536-61223555 None:intergenic 35.0%
! TTTTACACTTGTCAACTACC+TGG + chr3_2:61223593-61223612 Msa0415160:intron 35.0%
! GTTTTCTGCACTATTTTCAG+TGG + chr3_2:61223752-61223771 Msa0415160:CDS 35.0%
TCGAGTACTTGTAGAATTAG+CGG - chr3_2:61224311-61224330 None:intergenic 35.0%
AAGAGTGAACCCAAAAAATC+AGG + chr3_2:61224448-61224467 Msa0415160:CDS 35.0%
!!! GACTCCCATTTTTTTCTTGT+TGG + chr3_2:61224492-61224511 Msa0415160:intron 35.0%
AAAACCACAGATACATCTCT+TGG - chr3_2:61224565-61224584 None:intergenic 35.0%
!!! GATTTTTGGTCCAATGGAAA+AGG - chr3_2:61224677-61224696 None:intergenic 35.0%
TGAGTGTAAATTAGCAAGGT+GGG - chr3_2:61224769-61224788 None:intergenic 35.0%
AAAATTAGGAGTGACAACAC+AGG + chr3_2:61224937-61224956 Msa0415160:intron 35.0%
TAGGATGTTCTCATTGAACA+TGG - chr3_2:61225033-61225052 None:intergenic 35.0%
AAGCTGAGAGATAGTATTCA+TGG - chr3_2:61225089-61225108 None:intergenic 35.0%
GCTTCCATGCTTGTATTATT+TGG + chr3_2:61225277-61225296 Msa0415160:intron 35.0%
CATCCCAAATAATACAAGCA+TGG - chr3_2:61225284-61225303 None:intergenic 35.0%
TACAGCTGGATAAAAAACTG+TGG - chr3_2:61225376-61225395 None:intergenic 35.0%
TTACTGAAGGCTTCTCAAAA+TGG + chr3_2:61225677-61225696 Msa0415160:intron 35.0%
ATGTAAACTTACCATTGTCC+TGG + chr3_2:61225967-61225986 Msa0415160:intron 35.0%
!! TCCTGGTACTTTTGATGATT+TGG + chr3_2:61225984-61226003 Msa0415160:intron 35.0%
!! ACCAAATCATCAAAAGTACC+AGG - chr3_2:61225988-61226007 None:intergenic 35.0%
CCTAATCTATATCCTATCAC+AGG - chr3_2:61226011-61226030 None:intergenic 35.0%
CCTGTGATAGGATATAGATT+AGG + chr3_2:61226008-61226027 Msa0415160:intron 35.0%
! AAATCTCTAATCAGGGTGTT+AGG - chr3_2:61226090-61226109 None:intergenic 35.0%
GGACTGAAAATCTCTAATCA+GGG - chr3_2:61226097-61226116 None:intergenic 35.0%
! ATTAGAGATTTTCAGTCCCT+GGG + chr3_2:61226099-61226118 Msa0415160:intron 35.0%
! GATAGGGAAATCAGTCTTAT+CGG + chr3_2:61226327-61226346 Msa0415160:intron 35.0%
!! GGATGCTTTAGAGAAAATGA+TGG + chr3_2:61226351-61226370 Msa0415160:CDS 35.0%
!! TGCTTTAGAGAAAATGATGG+AGG + chr3_2:61226354-61226373 Msa0415160:CDS 35.0%
TACTGTCATCAGCAATTCTA+AGG - chr3_2:61226583-61226602 None:intergenic 35.0%
! TCATAGGTACTGTTTGTACT+TGG - chr3_2:61226609-61226628 None:intergenic 35.0%
GTACCTATGATACTCTACAT+TGG + chr3_2:61226619-61226638 Msa0415160:intron 35.0%
! AGTCCAATGTAGAGTATCAT+AGG - chr3_2:61226625-61226644 None:intergenic 35.0%
ATGATACTCTACATTGGACT+TGG + chr3_2:61226625-61226644 Msa0415160:intron 35.0%
!!! AACAGAAGCATTGGTTTTTG+TGG - chr3_2:61226706-61226725 None:intergenic 35.0%
CATCCAAAATATAGCGTGTT+AGG + chr3_2:61226758-61226777 Msa0415160:intron 35.0%
TTTAACTGTTAGCCATTGAG+TGG + chr3_2:61226795-61226814 Msa0415160:intron 35.0%
TTATGGGAAAATAGGAACCA+GGG - chr3_2:61226837-61226856 None:intergenic 35.0%
ATTATGGGAAAATAGGAACC+AGG - chr3_2:61226838-61226857 None:intergenic 35.0%
! CTTAACAATTTTCTTGCCTC+TGG + chr3_2:61227047-61227066 Msa0415160:intron 35.0%
TTAACATTGTGTAGAACCAG+AGG - chr3_2:61227066-61227085 None:intergenic 35.0%
!!! TACTGTTGCTGCTTTTGATA+GGG + chr3_2:61227403-61227422 Msa0415160:intron 35.0%
! GACTCTGAAGATACAATACA+AGG - chr3_2:61227480-61227499 None:intergenic 35.0%
ATGGAGCATAAGATCATTGA+TGG - chr3_2:61227511-61227530 None:intergenic 35.0%
AATGTGAAAAGGTGGTACAT+AGG + chr3_2:61227784-61227803 Msa0415160:intron 35.0%
TGGTGAATGGAAAAATTCTG+AGG + chr3_2:61227946-61227965 Msa0415160:intron 35.0%
ATTGGACAGATGCATAAGAT+TGG - chr3_2:61228023-61228042 None:intergenic 35.0%
TAGGTTACATGGAAGGTTAT+TGG - chr3_2:61228041-61228060 None:intergenic 35.0%
AAAAGATGTAGGAGAAAGAG+TGG - chr3_2:61228251-61228270 None:intergenic 35.0%
GACATGTTGTGTAAAATGTG+AGG - chr3_2:61228396-61228415 None:intergenic 35.0%
!!! CACAACATGTCTTTTTTGAG+AGG + chr3_2:61228405-61228424 Msa0415160:intron 35.0%
!!! AACATGTCTTTTTTGAGAGG+TGG + chr3_2:61228408-61228427 Msa0415160:intron 35.0%
!! TCTAGGATTTTGAAAAGCCA+TGG - chr3_2:61228573-61228592 None:intergenic 35.0%
ACCAAAATGATAAGGAGGTA+TGG + chr3_2:61228721-61228740 Msa0415160:intron 35.0%
! ACCATACCTCCTTATCATTT+TGG - chr3_2:61228725-61228744 None:intergenic 35.0%
ATGTCAGATTCAACATACAG+GGG - chr3_2:61228794-61228813 None:intergenic 35.0%
TGTCTCGCCATAAGAAAAAT+TGG + chr3_2:61228963-61228982 Msa0415160:three_prime_UTR 35.0%
!!! CCGTTCGCATTCATTTTTTA+AGG - chr3_2:61229243-61229262 None:intergenic 35.0%
ACATGAACTACTATGCAACA+AGG + chr3_2:61229297-61229316 Msa0415160:three_prime_UTR 35.0%
CATGAACTACTATGCAACAA+GGG + chr3_2:61229298-61229317 Msa0415160:three_prime_UTR 35.0%
!!! ACTCCGTTTCGTTGATTTTG+GGG + chr3_2:61222069-61222088 Msa0415160:five_prime_UTR 40.0%
AACCCCCAAAATCAACGAAA+CGG - chr3_2:61222075-61222094 None:intergenic 40.0%
!!! AGGTTTTGGGGAAGAAACAA+GGG - chr3_2:61222121-61222140 None:intergenic 40.0%
!!! AAGGTTTTGGGGAAGAAACA+AGG - chr3_2:61222122-61222141 None:intergenic 40.0%
! TTCCCCAAAACCTTTGCTTT+TGG + chr3_2:61222128-61222147 Msa0415160:CDS 40.0%
!! TCCCCAAAACCTTTGCTTTT+GGG + chr3_2:61222129-61222148 Msa0415160:CDS 40.0%
! TCCCAAAAGCAAAGGTTTTG+GGG - chr3_2:61222133-61222152 None:intergenic 40.0%
! GTCCCAAAAGCAAAGGTTTT+GGG - chr3_2:61222134-61222153 None:intergenic 40.0%
! TGTCCCAAAAGCAAAGGTTT+TGG - chr3_2:61222135-61222154 None:intergenic 40.0%
GAAGAATGTCCCAAAAGCAA+AGG - chr3_2:61222141-61222160 None:intergenic 40.0%
AAGGCTTTCTTCTTGTGAAG+AGG - chr3_2:61222173-61222192 None:intergenic 40.0%
GTGAATCTCCCAAAAGTGAA+AGG - chr3_2:61222192-61222211 None:intergenic 40.0%
TTCTTCCTCTCATGTTACCA+GGG + chr3_2:61222227-61222246 Msa0415160:CDS 40.0%
TTGAACCCAGTTGCTCAATT+TGG + chr3_2:61222562-61222581 Msa0415160:intron 40.0%
AACCACCAAATTGAGCAACT+GGG - chr3_2:61222570-61222589 None:intergenic 40.0%
! TACAAAGTCGCGTACGATTT+TGG - chr3_2:61222639-61222658 None:intergenic 40.0%
AATCGTACGCGACTTTGTAT+AGG + chr3_2:61222640-61222659 Msa0415160:intron 40.0%
! GGGGTTTTTGTGTTCATGAT+TGG + chr3_2:61223114-61223133 Msa0415160:intron 40.0%
TTAATCGCGGAACAAGAGAA+GGG - chr3_2:61223330-61223349 None:intergenic 40.0%
ATTAATCGCGGAACAAGAGA+AGG - chr3_2:61223331-61223350 None:intergenic 40.0%
GAGTCATAAGTAACACATGC+TGG + chr3_2:61223404-61223423 Msa0415160:intron 40.0%
!!! TTTTGGATTGGTGTTGGTGT+TGG + chr3_2:61223729-61223748 Msa0415160:CDS 40.0%
!! TTTGGATTGGTGTTGGTGTT+GGG + chr3_2:61223730-61223749 Msa0415160:CDS 40.0%
ACAGGTAGCTTCAAGATTGA+AGG + chr3_2:61223877-61223896 Msa0415160:intron 40.0%
GTGAGTTCCACTTTATTGCA+AGG + chr3_2:61223899-61223918 Msa0415160:intron 40.0%
TTCCACTTTATTGCAAGGCT+TGG + chr3_2:61223904-61223923 Msa0415160:intron 40.0%
TCCACTTTATTGCAAGGCTT+GGG + chr3_2:61223905-61223924 Msa0415160:intron 40.0%
AACCACTCCTTCACTTGATA+TGG - chr3_2:61223980-61223999 None:intergenic 40.0%
ACAAGCTTTCAAGACCATGA+TGG + chr3_2:61224186-61224205 Msa0415160:CDS 40.0%
CAAGCTTTCAAGACCATGAT+GGG + chr3_2:61224187-61224206 Msa0415160:CDS 40.0%
CGAGTACTTGTAGAATTAGC+GGG - chr3_2:61224310-61224329 None:intergenic 40.0%
!! GATGCTTCTACTTTTGTTGC+AGG - chr3_2:61224388-61224407 None:intergenic 40.0%
!!! CGAATGGATTTTTGGTCCAA+TGG - chr3_2:61224683-61224702 None:intergenic 40.0%
GTGAGTGTAAATTAGCAAGG+TGG - chr3_2:61224770-61224789 None:intergenic 40.0%
ATAAAGATTTCTCGGTGGGT+GGG - chr3_2:61225064-61225083 None:intergenic 40.0%
AATAAAGATTTCTCGGTGGG+TGG - chr3_2:61225065-61225084 None:intergenic 40.0%
GGCAATAAAGATTTCTCGGT+GGG - chr3_2:61225068-61225087 None:intergenic 40.0%
TGGCAATAAAGATTTCTCGG+TGG - chr3_2:61225069-61225088 None:intergenic 40.0%
! TCTAGTTTGTCACAGGATAC+TGG - chr3_2:61225185-61225204 None:intergenic 40.0%
TGACGCATCAAGTTCATTCA+AGG + chr3_2:61225565-61225584 Msa0415160:CDS 40.0%
AATCGCCAAAACCTTGGTTA+GGG - chr3_2:61225709-61225728 None:intergenic 40.0%
TAGATGTATCAGGCTACACA+GGG - chr3_2:61225812-61225831 None:intergenic 40.0%
ATAGATGTATCAGGCTACAC+AGG - chr3_2:61225813-61225832 None:intergenic 40.0%
!! CATCAAAAGTACCAGGACAA+TGG - chr3_2:61225981-61226000 None:intergenic 40.0%
!! TGATGATTTGGTCCTGTGAT+AGG + chr3_2:61225996-61226015 Msa0415160:intron 40.0%
GGGACTGAAAATCTCTAATC+AGG - chr3_2:61226098-61226117 None:intergenic 40.0%
! GATTAGAGATTTTCAGTCCC+TGG + chr3_2:61226098-61226117 Msa0415160:intron 40.0%
GTCATAAATGAGCTGCTGTA+TGG + chr3_2:61226265-61226284 Msa0415160:intron 40.0%
AAACCATCTTCTGCACAGTT+GGG - chr3_2:61226381-61226400 None:intergenic 40.0%
TAAACCATCTTCTGCACAGT+TGG - chr3_2:61226382-61226401 None:intergenic 40.0%
TACAAACATGCTCCACTCAA+TGG - chr3_2:61226810-61226829 None:intergenic 40.0%
TCGTGTTTGTCTCTTTCAAC+TGG + chr3_2:61227324-61227343 Msa0415160:intron 40.0%
!!! GTACTGTTGCTGCTTTTGAT+AGG + chr3_2:61227402-61227421 Msa0415160:intron 40.0%
! TCAAGTTGTTGACGATACTC+AGG - chr3_2:61227441-61227460 None:intergenic 40.0%
!!! AACGAAAGGCTCTAAGCTTT+TGG + chr3_2:61227862-61227881 Msa0415160:intron 40.0%
!! GAATGGAAAAATTCTGAGGC+AGG + chr3_2:61227950-61227969 Msa0415160:intron 40.0%
! AGTTAAATTGGTAGTCCTGG+AGG + chr3_2:61227991-61228010 Msa0415160:intron 40.0%
! TAAGATTGGTCAATTCCTCC+AGG - chr3_2:61228009-61228028 None:intergenic 40.0%
TTCCATGTAACCTAACCTGA+GGG + chr3_2:61228047-61228066 Msa0415160:intron 40.0%
! ACATTTTTCTGCGATGCATC+AGG - chr3_2:61228109-61228128 None:intergenic 40.0%
GTCATTCTATGTGCTACAGT+TGG + chr3_2:61228157-61228176 Msa0415160:intron 40.0%
TGTTTCAGAAACAACATGGG+TGG + chr3_2:61228270-61228289 Msa0415160:intron 40.0%
ATGATAGCTGCTTGAACTCT+AGG - chr3_2:61228590-61228609 None:intergenic 40.0%
TAGAGTTCAAGCAGCTATCA+TGG + chr3_2:61228589-61228608 Msa0415160:CDS 40.0%
TGTCAGATTCAACATACAGG+GGG - chr3_2:61228793-61228812 None:intergenic 40.0%
CCATGACCTGAAATGTAAAG+AGG - chr3_2:61228822-61228841 None:intergenic 40.0%
! CCTCTTTACATTTCAGGTCA+TGG + chr3_2:61228819-61228838 Msa0415160:intron 40.0%
AAAATATCTGAGCTCTTCCC+CGG + chr3_2:61228853-61228872 Msa0415160:CDS 40.0%
ATCTCATTGCTCGTCACTAA+AGG - chr3_2:61228933-61228952 None:intergenic 40.0%
TGCTCATGACTGTATACTAC+AGG + chr3_2:61228994-61229013 Msa0415160:three_prime_UTR 40.0%
! GAGTACTGTTGTTTGCGGTA+GGG - chr3_2:61221985-61222004 None:intergenic 45.0%
! TGAGTACTGTTGTTTGCGGT+AGG - chr3_2:61221986-61222005 None:intergenic 45.0%
GAAGAGAAGAGACTTGAGAG+TGG - chr3_2:61222022-61222041 None:intergenic 45.0%
!!! CTCCGTTTCGTTGATTTTGG+GGG + chr3_2:61222070-61222089 Msa0415160:five_prime_UTR 45.0%
CTTCTTCCTCTCATGTTACC+AGG + chr3_2:61222226-61222245 Msa0415160:CDS 45.0%
GTGAGATTTAGAAGCAACCC+TGG - chr3_2:61222247-61222266 None:intergenic 45.0%
AACCCAGTTGCTCAATTTGG+TGG + chr3_2:61222565-61222584 Msa0415160:intron 45.0%
GAACCACCAAATTGAGCAAC+TGG - chr3_2:61222571-61222590 None:intergenic 45.0%
! AAAGTCGCGTACGATTTTGG+TGG - chr3_2:61222636-61222655 None:intergenic 45.0%
CGACTTTGTATAGGTCCATG+CGG + chr3_2:61222649-61222668 Msa0415160:intron 45.0%
!! TGACCTAGTGGTATTGGCTT+GGG - chr3_2:61222904-61222923 None:intergenic 45.0%
!! TTGACCTAGTGGTATTGGCT+TGG - chr3_2:61222905-61222924 None:intergenic 45.0%
TAGGGTTGACCTAGTGGTAT+TGG - chr3_2:61222910-61222929 None:intergenic 45.0%
AGATGGAGGTGGTGATAACT+GGG - chr3_2:61223519-61223538 None:intergenic 45.0%
AAGATGGAGGTGGTGATAAC+TGG - chr3_2:61223520-61223539 None:intergenic 45.0%
GATTACACAGTCGAAGATGG+AGG - chr3_2:61223533-61223552 None:intergenic 45.0%
ACACTTGTCAACTACCTGGA+AGG + chr3_2:61223597-61223616 Msa0415160:intron 45.0%
CACTTGTCAACTACCTGGAA+GGG + chr3_2:61223598-61223617 Msa0415160:intron 45.0%
TTGACAATCATCTCCCTTCC+AGG - chr3_2:61223614-61223633 None:intergenic 45.0%
CCAACACCAATCCAAAAGAG+CGG - chr3_2:61223726-61223745 None:intergenic 45.0%
ACCCAAGCCTTGCAATAAAG+TGG - chr3_2:61223909-61223928 None:intergenic 45.0%
TTGGGAGCCATATCAAGTGA+AGG + chr3_2:61223970-61223989 Msa0415160:intron 45.0%
AGCCATATCAAGTGAAGGAG+TGG + chr3_2:61223975-61223994 Msa0415160:intron 45.0%
TGTATTCATCTGGCCCATCA+TGG - chr3_2:61224203-61224222 None:intergenic 45.0%
!! GAAAAGGCACCACTGTCAAA+TGG - chr3_2:61224235-61224254 None:intergenic 45.0%
AGGTATGTCTACTGTGACAG+TGG - chr3_2:61224368-61224387 None:intergenic 45.0%
!! ACAAAAGTAGAAGCATCCCC+AGG + chr3_2:61224391-61224410 Msa0415160:CDS 45.0%
TAACATTGATGTCTGGGCCT+GGG - chr3_2:61224411-61224430 None:intergenic 45.0%
TTAACATTGATGTCTGGGCC+TGG - chr3_2:61224412-61224431 None:intergenic 45.0%
GTAACGTACAATCTCTGCTC+AGG + chr3_2:61224470-61224489 Msa0415160:intron 45.0%
TCCACCAAGAGATGTATCTG+TGG + chr3_2:61224558-61224577 Msa0415160:intron 45.0%
ACCACAGATACATCTCTTGG+TGG - chr3_2:61224562-61224581 None:intergenic 45.0%
AGTGACAACACAGGCTTAAG+TGG + chr3_2:61224946-61224965 Msa0415160:intron 45.0%
TGTTCTCATTGAACATGGCG+TGG - chr3_2:61225028-61225047 None:intergenic 45.0%
! AGCACTCTCTAGTTTGTCAC+AGG - chr3_2:61225192-61225211 None:intergenic 45.0%
! AGCATGATAGTGTGCAAGCA+AGG - chr3_2:61225342-61225361 None:intergenic 45.0%
TTGCTTGCACACTATCATGC+TGG + chr3_2:61225341-61225360 Msa0415160:intron 45.0%
CAGTAAGTTGCCATTACAGC+TGG - chr3_2:61225390-61225409 None:intergenic 45.0%
TTCTGCTGCACAGTTTCTTC+TGG - chr3_2:61225521-61225540 None:intergenic 45.0%
ATCGCCAAAACCTTGGTTAG+GGG - chr3_2:61225708-61225727 None:intergenic 45.0%
GAATCGCCAAAACCTTGGTT+AGG - chr3_2:61225710-61225729 None:intergenic 45.0%
TTACGTGCAGATTGAGAACC+CGG - chr3_2:61225734-61225753 None:intergenic 45.0%
! AGGGAAATCAGTCTTATCGG+TGG + chr3_2:61226330-61226349 Msa0415160:intron 45.0%
GACTGTGTCGCAAAACACAT+TGG - chr3_2:61226871-61226890 None:intergenic 45.0%
CTGTTGCAGCTATTTACCTG+AGG + chr3_2:61226989-61227008 Msa0415160:intron 45.0%
GCTATTTACCTGAGGAGATG+AGG + chr3_2:61226997-61227016 Msa0415160:intron 45.0%
CTCAGGTTAGGTTACATGGA+AGG - chr3_2:61228048-61228067 None:intergenic 45.0%
CTTCCATGTAACCTAACCTG+AGG + chr3_2:61228046-61228065 Msa0415160:intron 45.0%
TCCATGTAACCTAACCTGAG+GGG + chr3_2:61228048-61228067 Msa0415160:intron 45.0%
TGAATGGGACAGTCGAATGA+TGG + chr3_2:61228299-61228318 Msa0415160:CDS 45.0%
TGAAAAGCCATGGCAACATC+AGG - chr3_2:61228563-61228582 None:intergenic 45.0%
AAATATCTGAGCTCTTCCCC+GGG + chr3_2:61228854-61228873 Msa0415160:CDS 45.0%
GACTGTATACTACAGGCTCA+TGG + chr3_2:61229001-61229020 Msa0415160:three_prime_UTR 45.0%
AGACTTGAGAGTGGCGTAGT+GGG - chr3_2:61222013-61222032 None:intergenic 50.0%
AGCAACCCTGGTAACATGAG+AGG - chr3_2:61222235-61222254 None:intergenic 50.0%
ACCACTAGGTCAACCCTAGT+AGG + chr3_2:61222912-61222931 Msa0415160:intron 50.0%
ACCTACTAGGGTTGACCTAG+TGG - chr3_2:61222916-61222935 None:intergenic 50.0%
ACATGCTGGGAATACAGTGC+AGG + chr3_2:61223418-61223437 Msa0415160:intron 50.0%
CATGCTGGGAATACAGTGCA+GGG + chr3_2:61223419-61223438 Msa0415160:intron 50.0%
ATGCTGGGAATACAGTGCAG+GGG + chr3_2:61223420-61223439 Msa0415160:intron 50.0%
ATGGAGGTGGTGATAACTGG+GGG - chr3_2:61223517-61223536 None:intergenic 50.0%
GATGGAGGTGGTGATAACTG+GGG - chr3_2:61223518-61223537 None:intergenic 50.0%
TACACAGTCGAAGATGGAGG+TGG - chr3_2:61223530-61223549 None:intergenic 50.0%
!!! CCGCTCTTTTGGATTGGTGT+TGG + chr3_2:61223723-61223742 Msa0415160:CDS 50.0%
TGCAAGGCTTGGGTGTAAAC+TGG + chr3_2:61223915-61223934 Msa0415160:intron 50.0%
GAAAGGAGATCCAGGGGAAA+AGG - chr3_2:61224251-61224270 None:intergenic 50.0%
AAAGGGGAAAGGAGATCCAG+GGG - chr3_2:61224257-61224276 None:intergenic 50.0%
GAAAGGGGAAAGGAGATCCA+GGG - chr3_2:61224258-61224277 None:intergenic 50.0%
!! GTAGGCATTGGAAAGGGGAA+AGG - chr3_2:61224268-61224287 None:intergenic 50.0%
!! GTGGTGTAGGCATTGGAAAG+GGG - chr3_2:61224273-61224292 None:intergenic 50.0%
!! GGTGGTGTAGGCATTGGAAA+GGG - chr3_2:61224274-61224293 None:intergenic 50.0%
!! TGGTGGTGTAGGCATTGGAA+AGG - chr3_2:61224275-61224294 None:intergenic 50.0%
TTTCCAATGCCTACACCACC+AGG + chr3_2:61224274-61224293 Msa0415160:CDS 50.0%
TTCCAATGCCTACACCACCA+GGG + chr3_2:61224275-61224294 Msa0415160:CDS 50.0%
AACATTGATGTCTGGGCCTG+GGG - chr3_2:61224410-61224429 None:intergenic 50.0%
AATTAGCAGCCCTCGTGTGA+GGG - chr3_2:61224612-61224631 None:intergenic 50.0%
AAATTAGCAGCCCTCGTGTG+AGG - chr3_2:61224613-61224632 None:intergenic 50.0%
! CAAGTGCGCACCTTTTCCAT+TGG + chr3_2:61224664-61224683 Msa0415160:intron 50.0%
!! CGGTGGGTGGGTTTACTTTT+AGG - chr3_2:61225052-61225071 None:intergenic 50.0%
TCGCCAAAACCTTGGTTAGG+GGG - chr3_2:61225707-61225726 None:intergenic 50.0%
!! CCAAGGTTTTGGCGATTCTC+CGG + chr3_2:61225712-61225731 Msa0415160:CDS 50.0%
!! CAAGGTTTTGGCGATTCTCC+GGG + chr3_2:61225713-61225732 Msa0415160:CDS 50.0%
! TCAGGCTACACAGGGTTTTC+CGG - chr3_2:61225804-61225823 None:intergenic 50.0%
GAGCATGTTTGTACTCTCCC+TGG + chr3_2:61226817-61226836 Msa0415160:intron 50.0%
CCATGTAACCTAACCTGAGG+GGG + chr3_2:61228049-61228068 Msa0415160:intron 50.0%
CATGTAACCTAACCTGAGGG+GGG + chr3_2:61228050-61228069 Msa0415160:intron 50.0%
ATGTAACCTAACCTGAGGGG+GGG + chr3_2:61228051-61228070 Msa0415160:intron 50.0%
!! ACATGGGTGGAAGCACTGAA+TGG + chr3_2:61228283-61228302 Msa0415160:CDS 50.0%
!! CATGGGTGGAAGCACTGAAT+GGG + chr3_2:61228284-61228303 Msa0415160:CDS 50.0%
AGCCATGGCAACATCAGGAT+TGG - chr3_2:61228558-61228577 None:intergenic 50.0%
AATATCTGAGCTCTTCCCCG+GGG + chr3_2:61228855-61228874 Msa0415160:CDS 50.0%
GAGACTTGAGAGTGGCGTAG+TGG - chr3_2:61222014-61222033 None:intergenic 55.0%
AGTGTGCTCCTCTCTTCACG+GGG - chr3_2:61222874-61222893 None:intergenic 55.0%
GAGTGTGCTCCTCTCTTCAC+GGG - chr3_2:61222875-61222894 None:intergenic 55.0%
GGAGTGTGCTCCTCTCTTCA+CGG - chr3_2:61222876-61222895 None:intergenic 55.0%
! GAAGAGAGGAGCACACTCCA+AGG + chr3_2:61222877-61222896 Msa0415160:intron 55.0%
!! GTGGTATTGGCTTGGGACCT+TGG - chr3_2:61222897-61222916 None:intergenic 55.0%
GGTCCCAAGCCAATACCACT+AGG + chr3_2:61222898-61222917 Msa0415160:intron 55.0%
GGAAAGGGGAAAGGAGATCC+AGG - chr3_2:61224259-61224278 None:intergenic 55.0%
! GTAGAATTAGCGGGTGCAGC+AGG - chr3_2:61224301-61224320 None:intergenic 55.0%
ATTAGCAGCCCTCGTGTGAG+GGG - chr3_2:61224611-61224630 None:intergenic 55.0%
AATGGAGCTCCCCCTAACCA+AGG + chr3_2:61225695-61225714 Msa0415160:CDS 55.0%
! GCTCCCCCTAACCAAGGTTT+TGG + chr3_2:61225701-61225720 Msa0415160:CDS 55.0%
CCGGAGAATCGCCAAAACCT+TGG - chr3_2:61225715-61225734 None:intergenic 55.0%
GGACCCAACTGTGCAGAAGA+TGG + chr3_2:61226375-61226394 Msa0415160:CDS 55.0%
GAAGGGTTCCTCATCTCCTC+AGG - chr3_2:61227008-61227027 None:intergenic 55.0%
CCCCCTCAGGTTAGGTTACA+TGG - chr3_2:61228052-61228071 None:intergenic 55.0%
TGTAACCTAACCTGAGGGGG+GGG + chr3_2:61228052-61228071 Msa0415160:intron 55.0%
GGCCAATCCTGATGTTGCCA+TGG + chr3_2:61228553-61228572 Msa0415160:CDS 55.0%
!! CTCTTCACGGGGGGCTAGTT+TGG - chr3_2:61222863-61222882 None:intergenic 60.0%
AACTAGCCCCCCGTGAAGAG+AGG + chr3_2:61222863-61222882 Msa0415160:intron 60.0%
TGTGCTCCTCTCTTCACGGG+GGG - chr3_2:61222872-61222891 None:intergenic 60.0%
GTGTGCTCCTCTCTTCACGG+GGG - chr3_2:61222873-61222892 None:intergenic 60.0%
! CTAGAGGGTCGCCGCTCTTT+TGG + chr3_2:61223712-61223731 Msa0415160:intron 60.0%
! GGGTCGCCGCTCTTTTGGAT+TGG + chr3_2:61223717-61223736 Msa0415160:CDS 60.0%
! GACAGTGGTGCCTTTTCCCC+TGG + chr3_2:61224238-61224257 Msa0415160:CDS 60.0%
TTAGCAGCCCTCGTGTGAGG+GGG - chr3_2:61224610-61224629 None:intergenic 60.0%
GTAACCTAACCTGAGGGGGG+GGG + chr3_2:61228053-61228072 Msa0415160:intron 60.0%
TAACCTAACCTGAGGGGGGG+GGG + chr3_2:61228054-61228073 Msa0415160:intron 60.0%
! GGCCCTGGTGGTGTAGGCAT+TGG - chr3_2:61224280-61224299 None:intergenic 65.0%
AAGCCATGCCCCCTCACACG+AGG + chr3_2:61224599-61224618 Msa0415160:intron 65.0%
AGCCATGCCCCCTCACACGA+GGG + chr3_2:61224600-61224619 Msa0415160:intron 65.0%
AACCTAACCTGAGGGGGGGG+GGG + chr3_2:61228055-61228074 Msa0415160:intron 65.0%
!! TCAAGGCTGGCCTGACACCC+CGG - chr3_2:61228875-61228894 None:intergenic 65.0%
! GCAGCAGGCCCTGGTGGTGT+AGG - chr3_2:61224286-61224305 None:intergenic 70.0%
! TTAGCGGGTGCAGCAGGCCC+TGG - chr3_2:61224295-61224314 None:intergenic 70.0%
AGCCCTCGTGTGAGGGGGCA+TGG - chr3_2:61224605-61224624 None:intergenic 70.0%
ACCTAACCTGAGGGGGGGGG+GGG + chr3_2:61228056-61228075 Msa0415160:intron 70.0%
! GAGCTCTTCCCCGGGGTGTC+AGG + chr3_2:61228862-61228881 Msa0415160:CDS 70.0%
!! AAGGCTGGCCTGACACCCCG+GGG - chr3_2:61228873-61228892 None:intergenic 70.0%
!! CAAGGCTGGCCTGACACCCC+GGG - chr3_2:61228874-61228893 None:intergenic 70.0%
CCTAACCTGAGGGGGGGGGG+GGG + chr3_2:61228057-61228076 Msa0415160:intron 75.0%
CTAACCTGAGGGGGGGGGGG+GGG + chr3_2:61228058-61228077 Msa0415160:intron 75.0%
TAACCTGAGGGGGGGGGGGG+GGG + chr3_2:61228059-61228078 Msa0415160:intron 75.0%
! GCGGGTGCAGCAGGCCCTGG+TGG - chr3_2:61224292-61224311 None:intergenic 80.0%
! CCCCCCCCCCCCCTCAGGTT+AGG - chr3_2:61228060-61228079 None:intergenic 80.0%
! AACCTGAGGGGGGGGGGGGG+GGG + chr3_2:61228060-61228079 Msa0415160:intron 80.0%
! ACCTGAGGGGGGGGGGGGGG+GGG + chr3_2:61228061-61228080 Msa0415160:intron 85.0%
! CCTGAGGGGGGGGGGGGGGG+GGG + chr3_2:61228062-61228081 Msa0415160:intron 90.0%
! CTGAGGGGGGGGGGGGGGGG+GGG + chr3_2:61228063-61228082 Msa0415160:intron 90.0%
! TGAGGGGGGGGGGGGGGGGG+GGG + chr3_2:61228064-61228083 Msa0415160:intron 90.0%
! CCCCCCCCCCCCCCCCCCTC+AGG - chr3_2:61228065-61228084 None:intergenic 95.0%
! GAGGGGGGGGGGGGGGGGGG+GGG + chr3_2:61228065-61228084 Msa0415160:intron 95.0%
! AGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:61228066-61228085 Msa0415160:intron 95.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 61221955 61229321 61221955 ID=Msa0415160;Name=Msa0415160
chr3_2 mRNA 61221955 61229321 61221955 ID=Msa0415160-mRNA-1;Parent=Msa0415160;Name=Msa0415160-mRNA-1;_AED=0.05;_eAED=0.05;_QI=144|1|1|1|1|1|14|427|432
chr3_2 exon 61221955 61222282 61221955 ID=Msa0415160-mRNA-1:exon:12913;Parent=Msa0415160-mRNA-1
chr3_2 exon 61223435 61223546 61223435 ID=Msa0415160-mRNA-1:exon:12914;Parent=Msa0415160-mRNA-1
chr3_2 exon 61223716 61223773 61223716 ID=Msa0415160-mRNA-1:exon:12915;Parent=Msa0415160-mRNA-1
chr3_2 exon 61223881 61223898 61223881 ID=Msa0415160-mRNA-1:exon:12916;Parent=Msa0415160-mRNA-1
chr3_2 exon 61224172 61224469 61224172 ID=Msa0415160-mRNA-1:exon:12917;Parent=Msa0415160-mRNA-1
chr3_2 exon 61225501 61225598 61225501 ID=Msa0415160-mRNA-1:exon:12918;Parent=Msa0415160-mRNA-1
chr3_2 exon 61225686 61225749 61225686 ID=Msa0415160-mRNA-1:exon:12919;Parent=Msa0415160-mRNA-1
chr3_2 exon 61226332 61226404 61226332 ID=Msa0415160-mRNA-1:exon:12920;Parent=Msa0415160-mRNA-1
chr3_2 exon 61226998 61227038 61226998 ID=Msa0415160-mRNA-1:exon:12921;Parent=Msa0415160-mRNA-1
chr3_2 exon 61227424 61227469 61227424 ID=Msa0415160-mRNA-1:exon:12922;Parent=Msa0415160-mRNA-1
chr3_2 exon 61228278 61228372 61228278 ID=Msa0415160-mRNA-1:exon:12923;Parent=Msa0415160-mRNA-1
chr3_2 exon 61228510 61228613 61228510 ID=Msa0415160-mRNA-1:exon:12924;Parent=Msa0415160-mRNA-1
chr3_2 exon 61228690 61228737 61228690 ID=Msa0415160-mRNA-1:exon:12925;Parent=Msa0415160-mRNA-1
chr3_2 exon 61228835 61229321 61228835 ID=Msa0415160-mRNA-1:exon:12926;Parent=Msa0415160-mRNA-1
chr3_2 five_prime_UTR 61221955 61222098 61221955 ID=Msa0415160-mRNA-1:five_prime_utr;Parent=Msa0415160-mRNA-1
chr3_2 CDS 61222099 61222282 61222099 ID=Msa0415160-mRNA-1:cds;Parent=Msa0415160-mRNA-1
chr3_2 CDS 61223435 61223546 61223435 ID=Msa0415160-mRNA-1:cds;Parent=Msa0415160-mRNA-1
chr3_2 CDS 61223716 61223773 61223716 ID=Msa0415160-mRNA-1:cds;Parent=Msa0415160-mRNA-1
chr3_2 CDS 61223881 61223898 61223881 ID=Msa0415160-mRNA-1:cds;Parent=Msa0415160-mRNA-1
chr3_2 CDS 61224172 61224469 61224172 ID=Msa0415160-mRNA-1:cds;Parent=Msa0415160-mRNA-1
chr3_2 CDS 61225501 61225598 61225501 ID=Msa0415160-mRNA-1:cds;Parent=Msa0415160-mRNA-1
chr3_2 CDS 61225686 61225749 61225686 ID=Msa0415160-mRNA-1:cds;Parent=Msa0415160-mRNA-1
chr3_2 CDS 61226332 61226404 61226332 ID=Msa0415160-mRNA-1:cds;Parent=Msa0415160-mRNA-1
chr3_2 CDS 61226998 61227038 61226998 ID=Msa0415160-mRNA-1:cds;Parent=Msa0415160-mRNA-1
chr3_2 CDS 61227424 61227469 61227424 ID=Msa0415160-mRNA-1:cds;Parent=Msa0415160-mRNA-1
chr3_2 CDS 61228278 61228372 61228278 ID=Msa0415160-mRNA-1:cds;Parent=Msa0415160-mRNA-1
chr3_2 CDS 61228510 61228613 61228510 ID=Msa0415160-mRNA-1:cds;Parent=Msa0415160-mRNA-1
chr3_2 CDS 61228690 61228737 61228690 ID=Msa0415160-mRNA-1:cds;Parent=Msa0415160-mRNA-1
chr3_2 CDS 61228835 61228894 61228835 ID=Msa0415160-mRNA-1:cds;Parent=Msa0415160-mRNA-1
chr3_2 three_prime_UTR 61228895 61229321 61228895 ID=Msa0415160-mRNA-1:three_prime_utr;Parent=Msa0415160-mRNA-1
Gene Sequence

>Msa0415160

ATGGAGAATCTTAATTTAGCCCTTGTTTCTTCCCCAAAACCTTTGCTTTTGGGACATTCTTCCTCAAAAAACCTCTTCACAAGAAGAAAGCCTTTCACTTTTGGGAGATTCACTTTTTCTGCTAACTCTTCTTCCTCTCATGTTACCAGGGTTGCTTCTAAATCTCACCAAAATCTAAAATCTGTGCAGGGGAAAGTGACAGTGCATAACTTTGCTAGCGTTTCTTCTTCAAATAGTCAAGAAACAACATCAGTTGGAGTTAGCCCCCAGTTATCACCACCTCCATCTTCGACTGTAGGGTCGCCGCTCTTTTGGATTGGTGTTGGTGTTGGGTTTTCTGCACTATTTTCAGTGGTAGCTTCAAGATTGAAGAAATATGCAATGCAACAAGCTTTCAAGACCATGATGGGCCAGATGAATACACAAAATAATCCATTTGACAGTGGTGCCTTTTCCCCTGGATCTCCTTTCCCCTTTCCAATGCCTACACCACCAGGGCCTGCTGCACCCGCTAATTCTACAAGTACTCGATCACAAGCATCTTCTGCACGAACTGCATCTCAATCCACTGTCACAGTAGACATACCTGCAACAAAAGTAGAAGCATCCCCAGGCCCAGACATCAATGTTAAAGATGAAGTAGAAGTAAAGAGTGAACCCAAAAAATCAGCTTTTGTAGATGTGTCTCCAGAAGAAACTGTGCAGCAGAATGCTTTTGAAAGATTTAAGGATGTTGACGCATCAAGTTCATTCAAGGAAGCAGCAGAAGCTTCTCAAAATGGAGCTCCCCCTAACCAAGGTTTTGGCGATTCTCCGGGTTCTCAATCTGCACGGAAATCAGTCTTATCGGTGGATGCTTTAGAGAAAATGATGGAGGACCCAACTGTGCAGAAGATGGTTTACCCCTATTTACCTGAGGAGATGAGGAACCCTTCTACCTTCAAATGGATGCTGCAGAATCCTGAGTATCGTCAACAACTTGAAGAAATGCTAAACAACATGGGTGGAAGCACTGAATGGGACAGTCGAATGATGGACACCTTAAAAAATTTCGACCTTAATAGTCCTGATGTTAAACAACAATTTGATCAAATTGGACTTTCTCCCGAAGAAGTCATTTCAAAGATTATGGCCAATCCTGATGTTGCCATGGCTTTTCAAAATCCTAGAGTTCAAGCAGCTATCATGGATTGTTCACAGAATCCAATGAATATTGCTAAATACCAAAATGATAAGGAGGTCATGGATGTCTTCAATAAAATATCTGAGCTCTTCCCCGGGGTGTCAGGCCAGCCTTGA
Protein sequence

>Msa0415160

MENLNLALVSSPKPLLLGHSSSKNLFTRRKPFTFGRFTFSANSSSSHVTRVASKSHQNLKSVQGKVTVHNFASVSSSNSQETTSVGVSPQLSPPPSSTVGSPLFWIGVGVGFSALFSVVASRLKKYAMQQAFKTMMGQMNTQNNPFDSGAFSPGSPFPFPMPTPPGPAAPANSTSTRSQASSARTASQSTVTVDIPATKVEASPGPDINVKDEVEVKSEPKKSAFVDVSPEETVQQNAFERFKDVDASSSFKEAAEASQNGAPPNQGFGDSPGSQSARKSVLSVDALEKMMEDPTVQKMVYPYLPEEMRNPSTFKWMLQNPEYRQQLEEMLNNMGGSTEWDSRMMDTLKNFDLNSPDVKQQFDQIGLSPEEVISKIMANPDVAMAFQNPRVQAAIMDCSQNPMNIAKYQNDKEVMDVFNKISELFPGVSGQP*