Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784640 | sp|Q07202|CORA_MEDSA | 63.675 | 234 | 41 | 4 | 1 | 220 | 1 | 204 | 9.20e-19 | 84.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784640 | G7K7E3 | 82.000 | 50 | 8 | 1 | 1 | 49 | 1 | 50 | 7.14e-17 | 85.1 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043940 | Msa0784640 | 0.817684 | 2.902565e-52 | -8.615850e-47 |
| Msa0092710 | Msa0784640 | 0.813925 | 1.999968e-51 | -8.615850e-47 |
| Msa0647000 | Msa0784640 | 0.800285 | 1.548151e-48 | -8.615850e-47 |
| Msa0717150 | Msa0784640 | 0.802385 | 5.752864e-49 | -8.615850e-47 |
| Msa0726610 | Msa0784640 | 0.805174 | 1.515856e-49 | -8.615850e-47 |
| Msa0738870 | Msa0784640 | 0.810709 | 1.007175e-50 | -8.615850e-47 |
| Msa0752580 | Msa0784640 | 0.802210 | 6.252021e-49 | -8.615850e-47 |
| Msa0760890 | Msa0784640 | 0.814015 | 1.910655e-51 | -8.615850e-47 |
| Msa0783260 | Msa0784640 | 0.806657 | 7.394528e-50 | -8.615850e-47 |
| Msa0783270 | Msa0784640 | 0.843639 | 1.238466e-58 | -8.615850e-47 |
| Msa0784640 | Msa0819340 | 0.806183 | 9.307988e-50 | -8.615850e-47 |
| Msa0784640 | Msa0819350 | 0.805747 | 1.149754e-49 | -8.615850e-47 |
| Msa0784640 | Msa0830900 | 0.801565 | 8.478566e-49 | -8.615850e-47 |
| Msa0784640 | Msa0848380 | 0.800554 | 1.364742e-48 | -8.615850e-47 |
| Msa0784640 | Msa1055360 | 0.805383 | 1.371106e-49 | -8.615850e-47 |
| Msa0784640 | Msa1063920 | 0.804351 | 2.251823e-49 | -8.615850e-47 |
| Msa0784640 | Msa1093390 | 0.813327 | 2.706862e-51 | -8.615850e-47 |
| Msa0784640 | Msa1306200 | 0.807790 | 4.255032e-50 | -8.615850e-47 |
| Msa0784640 | Msa1361190 | 0.807207 | 5.658009e-50 | -8.615850e-47 |
| Msa0784640 | Msa1439120 | 0.826581 | 2.507304e-54 | -8.615850e-47 |
| Msa0784640 | Msa1440220 | 0.802791 | 4.743610e-49 | -8.615850e-47 |
| Msa0784640 | Msa1455660 | 0.823646 | 1.238069e-53 | -8.615850e-47 |
| Msa0182640 | Msa0784640 | 0.800336 | 1.512169e-48 | -8.615850e-47 |
| Msa0213080 | Msa0784640 | 0.804865 | 1.759792e-49 | -8.615850e-47 |
| Msa0216210 | Msa0784640 | 0.805603 | 1.232647e-49 | -8.615850e-47 |
| Msa0222660 | Msa0784640 | 0.835407 | 1.708782e-56 | -8.615850e-47 |
| Msa0473530 | Msa0784640 | 0.801745 | 7.788702e-49 | -8.615850e-47 |
| Msa0264050 | Msa0784640 | 0.817724 | 2.843288e-52 | -8.615850e-47 |
| Msa0296610 | Msa0784640 | 0.804834 | 1.785868e-49 | -8.615850e-47 |
| Msa0301980 | Msa0784640 | 0.812750 | 3.623840e-51 | -8.615850e-47 |
| Msa0339310 | Msa0784640 | 0.822007 | 2.981889e-53 | -8.615850e-47 |
| Msa0530930 | Msa0784640 | 0.807063 | 6.069100e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784640 | MtrunA17_Chr5g0438511 | 82.000 | 50 | 8 | 1 | 1 | 49 | 1 | 50 | 1.37e-20 | 85.1 |
| Msa0784640 | MtrunA17_Chr5g0438501 | 57.292 | 96 | 17 | 2 | 1 | 95 | 1 | 73 | 1.41e-12 | 63.5 |
| Msa0784640 | MtrunA17_Chr5g0438491 | 65.934 | 91 | 13 | 1 | 1 | 91 | 1 | 73 | 2.85e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 111 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTCCACTGATGCTAAAA+AGG | 0.209251 | 5_2:+69272835 | Msa0784640:CDS |
| GTTGTAACCACCTCCATATT+TGG | 0.267545 | 5_2:-69273635 | None:intergenic |
| GTAACTACCACCACCATATT+TGG | 0.270116 | 5_2:-69274028 | None:intergenic |
| GGTGGTTACCACAACGATTA+TGG | 0.294165 | 5_2:+69273688 | Msa0784640:CDS |
| TTGAACAATGGGTTCGAAAA+AGG | 0.298712 | 5_2:+69272742 | None:intergenic |
| AATCCTCATGCTAAGCCTTT+TGG | 0.319060 | 5_2:+69272766 | Msa0784640:CDS |
| TACAGTGGTGGAGGTGGTGG+TGG | 0.348235 | 5_2:+69273721 | Msa0784640:CDS |
| GAAGTAAATGATGCCAAATA+TGG | 0.357966 | 5_2:+69273622 | Msa0784640:CDS |
| GAAATAAATGATGCCAAATA+TGG | 0.357999 | 5_2:+69274015 | Msa0784640:CDS |
| GGTTACAGTGGTGGAGGTGG+TGG | 0.386147 | 5_2:+69273718 | Msa0784640:CDS |
| GGTGGAGGTGGTGGTGGAGA+TGG | 0.407324 | 5_2:+69273727 | Msa0784640:CDS |
| GGTGGAGGTCACGGTGGTCA+TGG | 0.421667 | 5_2:+69273949 | Msa0784640:CDS |
| CACGGTGGACATGGTGGCCA+TGG | 0.438550 | 5_2:+69274090 | Msa0784640:CDS |
| TTTGAGTGTTGTCCTCAGTT+TGG | 0.439668 | 5_2:-69274128 | None:intergenic |
| GGTGGTTACAATGGTGGAGG+TGG | 0.449116 | 5_2:+69273877 | Msa0784640:CDS |
| AACCATGGTGGAGGTGGTGG+TGG | 0.454701 | 5_2:+69273814 | Msa0784640:CDS |
| GGTGGATACAATGGTGGAGG+TGG | 0.457644 | 5_2:+69273916 | Msa0784640:CDS |
| CATGGTGGAGGTGGTGGTGG+AGG | 0.459529 | 5_2:+69273817 | Msa0784640:CDS |
| GGTGGTTCCCACAATGGTGG+TGG | 0.463795 | 5_2:+69273895 | Msa0784640:CDS |
| GTTGGTTACAGTGGTGGAGG+TGG | 0.464829 | 5_2:+69273715 | Msa0784640:CDS |
| TGTGTTGGTTACAGTGGTGG+AGG | 0.471458 | 5_2:+69273712 | Msa0784640:CDS |
| TACAACCATGGTGGAGGTGG+TGG | 0.473185 | 5_2:+69273811 | Msa0784640:CDS |
| GGAGGTGGTCACGGTGGACA+TGG | 0.479032 | 5_2:+69274081 | Msa0784640:CDS |
| GGAGGTGGTTACAATGGTGG+TGG | 0.479043 | 5_2:+69273931 | Msa0784640:CDS |
| GGTTCCCACAATGGTGGTGG+TGG | 0.496083 | 5_2:+69273898 | Msa0784640:CDS |
| CACAACGATTATGGTTGTGT+TGG | 0.499531 | 5_2:+69273697 | Msa0784640:CDS |
| GGTGGTTACAATGGTGGTGG+AGG | 0.504299 | 5_2:+69273934 | Msa0784640:CDS |
| TACAATGGTGGTGGAGGTCA+CGG | 0.506705 | 5_2:+69273940 | Msa0784640:CDS |
| AGTGTTGTCCTCAGTTTGGT+CGG | 0.506970 | 5_2:-69274124 | None:intergenic |
| CATGGTGGCCATGGTGGTCA+CGG | 0.508694 | 5_2:+69274099 | Msa0784640:CDS |
| TTTCCTCAGTGATGTCCGCT+AGG | 0.509380 | 5_2:+69272801 | Msa0784640:CDS |
| GGTTGTGTTGGTTACAGTGG+TGG | 0.511666 | 5_2:+69273709 | Msa0784640:CDS |
| GGTGGTTACCACAACGGTGG+TGG | 0.513980 | 5_2:+69273856 | Msa0784640:CDS |
| GGTTATAACCACGGTGGTGG+TGG | 0.518027 | 5_2:+69273838 | Msa0784640:CDS |
| GGTGGTGGATACAATGGTGG+AGG | 0.521406 | 5_2:+69273913 | Msa0784640:CDS |
| GGAGGTTATAACCACGGTGG+TGG | 0.533367 | 5_2:+69273835 | Msa0784640:CDS |
| GTATCCACCACCACCATTGT+GGG | 0.536318 | 5_2:-69273902 | None:intergenic |
| AGTTATCACCACGGTGGAGG+TGG | 0.539894 | 5_2:+69274066 | Msa0784640:CDS |
| TTCCTCAGTGATGTCCGCTA+GGG | 0.540952 | 5_2:+69272802 | Msa0784640:CDS |
| AAATAAGAGCCATAGCCAAA+AGG | 0.545787 | 5_2:-69272781 | None:intergenic |
| GGTTACCACAACGGTGGTGG+TGG | 0.548660 | 5_2:+69273859 | Msa0784640:CDS |
| GGTTACAACCATGGTGGAGG+TGG | 0.550910 | 5_2:+69273766 | Msa0784640:CDS |
| TGTTACAACCATGGTGGAGG+TGG | 0.551046 | 5_2:+69273808 | Msa0784640:CDS |
| CACCACGGTGGAGGTGGTCA+CGG | 0.555739 | 5_2:+69274072 | Msa0784640:CDS |
| GGTGGTTACAACCATGGTGG+AGG | 0.556342 | 5_2:+69273763 | Msa0784640:CDS |
| GGAGGTGGTTCCCACAATGG+TGG | 0.557241 | 5_2:+69273892 | Msa0784640:CDS |
| GGTTACAACCACGGTGGAGG+TGG | 0.560417 | 5_2:+69273649 | Msa0784640:CDS |
| GGTTACAACCACGGTGGAGG+TGG | 0.560417 | 5_2:+69273670 | Msa0784640:CDS |
| GGTAGTTATCACCACGGTGG+AGG | 0.564481 | 5_2:+69274063 | Msa0784640:CDS |
| TGTATCCACCACCACCATTG+TGG | 0.564670 | 5_2:-69273903 | None:intergenic |
| GGTGGTTACAACCACGGTGG+AGG | 0.568751 | 5_2:+69273646 | Msa0784640:CDS |
| GGTGGTTACAACCACGGTGG+AGG | 0.568751 | 5_2:+69273667 | Msa0784640:CDS |
| AACGGTGGTGGTGGTTACAA+TGG | 0.578197 | 5_2:+69273868 | Msa0784640:CDS |
| GATGGTTACAACCATGGAGG+TGG | 0.584332 | 5_2:+69273745 | Msa0784640:CDS |
| GGTGGTTACAACCATGGTGG+AGG | 0.588956 | 5_2:+69273784 | Msa0784640:CDS |
| GGTTGTTACAACCATGGTGG+AGG | 0.588956 | 5_2:+69273805 | Msa0784640:CDS |
| AATGATGCCAAATATGGAGG+TGG | 0.589889 | 5_2:+69273628 | Msa0784640:CDS |
| GGTAGTTACCACCACGGAGA+AGG | 0.590437 | 5_2:+69274042 | Msa0784640:CDS |
| CATGGTTGTAACCACCTCCA+TGG | 0.593594 | 5_2:-69273756 | None:intergenic |
| GGTGGAGGTGGTTCCCACAA+TGG | 0.597423 | 5_2:+69273889 | Msa0784640:CDS |
| AATGGTGGTGGTGGATACAA+TGG | 0.603378 | 5_2:+69273907 | Msa0784640:CDS |
| GGTGGTGGTTACAATGGTGG+AGG | 0.609082 | 5_2:+69273874 | Msa0784640:CDS |
| TGTAACCACCACCACCGTTG+TGG | 0.615245 | 5_2:-69273864 | None:intergenic |
| AATGGTGGAGGTGGTTACAA+TGG | 0.617120 | 5_2:+69273925 | Msa0784640:CDS |
| CAACACAACCATAATCGTTG+TGG | 0.619488 | 5_2:-69273696 | None:intergenic |
| TATGGTTGTGTTGGTTACAG+TGG | 0.622804 | 5_2:+69273706 | Msa0784640:CDS |
| GGTGGTGGTGGTTACCACAA+CGG | 0.627184 | 5_2:+69273850 | Msa0784640:CDS |
| GGTGGACATGGTGGCCATGG+TGG | 0.628216 | 5_2:+69274093 | Msa0784640:CDS |
| GGTGGTCACGGTGGACATGG+TGG | 0.629392 | 5_2:+69274084 | Msa0784640:CDS |
| GGTCGGCACCGTGACCACCA+TGG | 0.634160 | 5_2:-69274107 | None:intergenic |
| AATGATGCCAAATATGGTGG+TGG | 0.634716 | 5_2:+69274021 | Msa0784640:CDS |
| GGAGGTCACGGTGGTCATGG+CGG | 0.640286 | 5_2:+69273952 | Msa0784640:CDS |
| GGTGGAGATGGTTACAACCA+TGG | 0.642562 | 5_2:+69273739 | Msa0784640:CDS |
| GTCTGTTGCCGTGCAAACTG+AGG | 0.643641 | 5_2:+69273981 | Msa0784640:CDS |
| CATGGAGGTGGTTACAACCA+TGG | 0.648790 | 5_2:+69273757 | Msa0784640:CDS |
| GGTTGTAACCACCTCCACCA+TGG | 0.653872 | 5_2:-69273774 | None:intergenic |
| TAGCCAAAAGGCTTAGCATG+AGG | 0.658082 | 5_2:-69272769 | None:intergenic |
| CACGGTGGAGGTGGTCACGG+TGG | 0.658662 | 5_2:+69274075 | Msa0784640:CDS |
| GGTGGAGGTGGTTACAACCA+TGG | 0.658919 | 5_2:+69273778 | Msa0784640:CDS |
| CTCCACCACCACCTCCACCA+TGG | 0.661606 | 5_2:-69273816 | None:intergenic |
| GGTGGAGGTGGTTACAATGG+TGG | 0.666886 | 5_2:+69273928 | Msa0784640:CDS |
| GGTGGTGGTGGATACAATGG+TGG | 0.670712 | 5_2:+69273910 | Msa0784640:CDS |
| GGTGGTGGTGGTTACAATGG+TGG | 0.671495 | 5_2:+69273871 | Msa0784640:CDS |
| GGTTGTAACAACCTCCACCA+TGG | 0.677443 | 5_2:-69273795 | None:intergenic |
| GGTGGAGGTGGTTACAACCA+CGG | 0.683488 | 5_2:+69273661 | Msa0784640:CDS |
| TATGGAGGTGGTTACAACCA+CGG | 0.686485 | 5_2:+69273640 | Msa0784640:CDS |
| ATAAATGATGCCAAATATGG+TGG | 0.687675 | 5_2:+69274018 | Msa0784640:CDS |
| CACCGTGACCACCTCCACCG+TGG | 0.688584 | 5_2:-69274074 | None:intergenic |
| TCACGGTGCCGACCAAACTG+AGG | 0.694971 | 5_2:+69274116 | Msa0784640:CDS |
| GTAAATGATGCCAAATATGG+AGG | 0.695370 | 5_2:+69273625 | Msa0784640:CDS |
| GGTGATAACTACCTTCTCCG+TGG | 0.707305 | 5_2:-69274053 | None:intergenic |
| GGTGGAGGTTGTTACAACCA+TGG | 0.710164 | 5_2:+69273799 | Msa0784640:CDS |
| GATAACTACCTTCTCCGTGG+TGG | 0.712814 | 5_2:-69274050 | None:intergenic |
| GGAGGTTGTTACAACCATGG+TGG | 0.714854 | 5_2:+69273802 | Msa0784640:CDS |
| AATGGTGGTGGAGGTCACGG+TGG | 0.715780 | 5_2:+69273943 | Msa0784640:CDS |
| GGTGGTGGAGGTTATAACCA+CGG | 0.717411 | 5_2:+69273829 | Msa0784640:CDS |
| GGTTGTAACCACCTCCACCG+TGG | 0.717584 | 5_2:-69273657 | None:intergenic |
| GGAGGTGGTTACAACCATGG+TGG | 0.718422 | 5_2:+69273760 | Msa0784640:CDS |
| GGTGGTGGTTACCACAACGG+TGG | 0.719150 | 5_2:+69273853 | Msa0784640:CDS |
| AGTTTCAGTTAAGTCCCTAG+CGG | 0.722649 | 5_2:-69272816 | None:intergenic |
| GTCCCTAGCGGACATCACTG+AGG | 0.722830 | 5_2:-69272804 | None:intergenic |
| TGTGGTAACCACCTCCACCG+TGG | 0.730968 | 5_2:-69273678 | None:intergenic |
| TGTGGTAACCACCACCACCG+TGG | 0.740537 | 5_2:-69273846 | None:intergenic |
| GGAGGTGGTTACAACCATGG+TGG | 0.740649 | 5_2:+69273781 | Msa0784640:CDS |
| GGTGGTGGTAGTTACCACCA+CGG | 0.763341 | 5_2:+69274036 | Msa0784640:CDS |
| GAAGGTAGTTATCACCACGG+TGG | 0.769330 | 5_2:+69274060 | Msa0784640:CDS |
| GGAGAAGGTAGTTATCACCA+CGG | 0.770033 | 5_2:+69274057 | Msa0784640:CDS |
| GGAGATGGTTACAACCATGG+AGG | 0.778269 | 5_2:+69273742 | Msa0784640:CDS |
| GGAGGTGGTTACAACCACGG+TGG | 0.781749 | 5_2:+69273643 | Msa0784640:CDS |
| GGAGGTGGTTACAACCACGG+TGG | 0.797028 | 5_2:+69273664 | Msa0784640:CDS |
| GGTGGAGGTTATAACCACGG+TGG | 0.806023 | 5_2:+69273832 | Msa0784640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAA+AGG | + | chr5_2:69273075-69273094 | Msa0784640:intron | 0.0% |
| !! | ATATATATATATATATATAA+AGG | + | chr5_2:69273075-69273094 | Msa0784640:intron | 0.0% |
| !!! | TTTTTTTTTATATAACATTG+AGG | - | chr5_2:69273008-69273027 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTATATAACATTG+AGG | - | chr5_2:69273008-69273027 | None:intergenic | 10.0% |
| !! | AAATTATTCAAACATTACAT+AGG | + | chr5_2:69273474-69273493 | Msa0784640:intron | 15.0% |
| !! | AAATTATTCAAACATTACAT+AGG | + | chr5_2:69273474-69273493 | Msa0784640:intron | 15.0% |
| !!! | ATTCTTTTCTACTTTTTTGA+AGG | + | chr5_2:69272905-69272924 | Msa0784640:intron | 20.0% |
| !!! | AATTGGATTTGTTTATTTTC+CGG | + | chr5_2:69273195-69273214 | Msa0784640:intron | 20.0% |
| !!! | ATTCTTTTCTACTTTTTTGA+AGG | + | chr5_2:69272905-69272924 | Msa0784640:intron | 20.0% |
| !!! | AATTGGATTTGTTTATTTTC+CGG | + | chr5_2:69273195-69273214 | Msa0784640:intron | 20.0% |
| ! | GGAAAATAAACAAATCCAAT+TGG | - | chr5_2:69273196-69273215 | None:intergenic | 25.0% |
| ! | GAATTAAATGTACAATCCAA+AGG | + | chr5_2:69273266-69273285 | Msa0784640:intron | 25.0% |
| ! | CATATATATTATGTTTGCAG+AGG | + | chr5_2:69273582-69273601 | Msa0784640:intron | 25.0% |
| ! | GAAATAAATGATGCCAAATA+TGG | + | chr5_2:69274015-69274034 | Msa0784640:CDS | 25.0% |
| ! | GGAAAATAAACAAATCCAAT+TGG | - | chr5_2:69273196-69273215 | None:intergenic | 25.0% |
| ! | GAATTAAATGTACAATCCAA+AGG | + | chr5_2:69273266-69273285 | Msa0784640:intron | 25.0% |
| ! | CATATATATTATGTTTGCAG+AGG | + | chr5_2:69273582-69273601 | Msa0784640:intron | 25.0% |
| ! | GAAATAAATGATGCCAAATA+TGG | + | chr5_2:69274015-69274034 | Msa0784640:CDS | 25.0% |
| !! | TGTTTATTTTCCGGAAATCA+TGG | + | chr5_2:69273204-69273223 | Msa0784640:intron | 30.0% |
| !! | TGTACATTTAATTCTGAGAC+TGG | - | chr5_2:69273260-69273279 | None:intergenic | 30.0% |
| GAAGTAAATGATGCCAAATA+TGG | + | chr5_2:69273622-69273641 | Msa0784640:CDS | 30.0% | |
| ATAAATGATGCCAAATATGG+TGG | + | chr5_2:69274018-69274037 | Msa0784640:CDS | 30.0% | |
| !! | TGTTTATTTTCCGGAAATCA+TGG | + | chr5_2:69273204-69273223 | Msa0784640:intron | 30.0% |
| !! | TGTACATTTAATTCTGAGAC+TGG | - | chr5_2:69273260-69273279 | None:intergenic | 30.0% |
| GAAGTAAATGATGCCAAATA+TGG | + | chr5_2:69273622-69273641 | Msa0784640:CDS | 30.0% | |
| ATAAATGATGCCAAATATGG+TGG | + | chr5_2:69274018-69274037 | Msa0784640:CDS | 30.0% | |
| AAATAAGAGCCATAGCCAAA+AGG | - | chr5_2:69272784-69272803 | None:intergenic | 35.0% | |
| AACTTCCACTGATGCTAAAA+AGG | + | chr5_2:69272835-69272854 | Msa0784640:CDS | 35.0% | |
| ACTTCCACTGATGCTAAAAA+GGG | + | chr5_2:69272836-69272855 | Msa0784640:CDS | 35.0% | |
| AACAAATCCAATTGGCTGAA+TGG | - | chr5_2:69273188-69273207 | None:intergenic | 35.0% | |
| TTCACAAAGAAGTTGTTGAG+TGG | + | chr5_2:69273447-69273466 | Msa0784640:intron | 35.0% | |
| GTAAATGATGCCAAATATGG+AGG | + | chr5_2:69273625-69273644 | Msa0784640:CDS | 35.0% | |
| AAATAAGAGCCATAGCCAAA+AGG | - | chr5_2:69272784-69272803 | None:intergenic | 35.0% | |
| AACTTCCACTGATGCTAAAA+AGG | + | chr5_2:69272835-69272854 | Msa0784640:CDS | 35.0% | |
| ACTTCCACTGATGCTAAAAA+GGG | + | chr5_2:69272836-69272855 | Msa0784640:CDS | 35.0% | |
| AACAAATCCAATTGGCTGAA+TGG | - | chr5_2:69273188-69273207 | None:intergenic | 35.0% | |
| TTCACAAAGAAGTTGTTGAG+TGG | + | chr5_2:69273447-69273466 | Msa0784640:intron | 35.0% | |
| GTAAATGATGCCAAATATGG+AGG | + | chr5_2:69273625-69273644 | Msa0784640:CDS | 35.0% | |
| ! | AATCCTCATGCTAAGCCTTT+TGG | + | chr5_2:69272766-69272785 | Msa0784640:CDS | 40.0% |
| AGTTTCAGTTAAGTCCCTAG+CGG | - | chr5_2:69272819-69272838 | None:intergenic | 40.0% | |
| AGTGATGCTATATATCCCGA+GGG | + | chr5_2:69273135-69273154 | Msa0784640:intron | 40.0% | |
| ! | TATTTTCCGGAAATCATGGC+AGG | + | chr5_2:69273208-69273227 | Msa0784640:intron | 40.0% |
| CATTATTGTGCCACGTCTAT+CGG | + | chr5_2:69273290-69273309 | Msa0784640:intron | 40.0% | |
| ATTATTGTGCCACGTCTATC+GGG | + | chr5_2:69273291-69273310 | Msa0784640:intron | 40.0% | |
| ATAATGCTTTGTATCCCGAC+AGG | - | chr5_2:69273334-69273353 | None:intergenic | 40.0% | |
| AATGATGCCAAATATGGAGG+TGG | + | chr5_2:69273628-69273647 | Msa0784640:CDS | 40.0% | |
| GTTGTAACCACCTCCATATT+TGG | - | chr5_2:69273638-69273657 | None:intergenic | 40.0% | |
| CAACACAACCATAATCGTTG+TGG | - | chr5_2:69273699-69273718 | None:intergenic | 40.0% | |
| CACAACGATTATGGTTGTGT+TGG | + | chr5_2:69273697-69273716 | Msa0784640:CDS | 40.0% | |
| !! | TATGGTTGTGTTGGTTACAG+TGG | + | chr5_2:69273706-69273725 | Msa0784640:CDS | 40.0% |
| ! | AGTCTTTTCCTCAGTTTGCA+CGG | - | chr5_2:69273992-69274011 | None:intergenic | 40.0% |
| AATGATGCCAAATATGGTGG+TGG | + | chr5_2:69274021-69274040 | Msa0784640:CDS | 40.0% | |
| GTAACTACCACCACCATATT+TGG | - | chr5_2:69274031-69274050 | None:intergenic | 40.0% | |
| ! | TTTGAGTGTTGTCCTCAGTT+TGG | - | chr5_2:69274131-69274150 | None:intergenic | 40.0% |
| ! | AATCCTCATGCTAAGCCTTT+TGG | + | chr5_2:69272766-69272785 | Msa0784640:CDS | 40.0% |
| AGTTTCAGTTAAGTCCCTAG+CGG | - | chr5_2:69272819-69272838 | None:intergenic | 40.0% | |
| AGTGATGCTATATATCCCGA+GGG | + | chr5_2:69273135-69273154 | Msa0784640:intron | 40.0% | |
| ! | TATTTTCCGGAAATCATGGC+AGG | + | chr5_2:69273208-69273227 | Msa0784640:intron | 40.0% |
| CATTATTGTGCCACGTCTAT+CGG | + | chr5_2:69273290-69273309 | Msa0784640:intron | 40.0% | |
| ATTATTGTGCCACGTCTATC+GGG | + | chr5_2:69273291-69273310 | Msa0784640:intron | 40.0% | |
| ATAATGCTTTGTATCCCGAC+AGG | - | chr5_2:69273334-69273353 | None:intergenic | 40.0% | |
| AATGATGCCAAATATGGAGG+TGG | + | chr5_2:69273628-69273647 | Msa0784640:CDS | 40.0% | |
| GTTGTAACCACCTCCATATT+TGG | - | chr5_2:69273638-69273657 | None:intergenic | 40.0% | |
| CAACACAACCATAATCGTTG+TGG | - | chr5_2:69273699-69273718 | None:intergenic | 40.0% | |
| CACAACGATTATGGTTGTGT+TGG | + | chr5_2:69273697-69273716 | Msa0784640:CDS | 40.0% | |
| !! | TATGGTTGTGTTGGTTACAG+TGG | + | chr5_2:69273706-69273725 | Msa0784640:CDS | 40.0% |
| ! | AGTCTTTTCCTCAGTTTGCA+CGG | - | chr5_2:69273992-69274011 | None:intergenic | 40.0% |
| AATGATGCCAAATATGGTGG+TGG | + | chr5_2:69274021-69274040 | Msa0784640:CDS | 40.0% | |
| GTAACTACCACCACCATATT+TGG | - | chr5_2:69274031-69274050 | None:intergenic | 40.0% | |
| ! | TTTGAGTGTTGTCCTCAGTT+TGG | - | chr5_2:69274131-69274150 | None:intergenic | 40.0% |
| TAGCCAAAAGGCTTAGCATG+AGG | - | chr5_2:69272772-69272791 | None:intergenic | 45.0% | |
| !! | CATGCTAAGCCTTTTGGCTA+TGG | + | chr5_2:69272772-69272791 | Msa0784640:CDS | 45.0% |
| !! | CTCACCCTTTTTAGCATCAG+TGG | - | chr5_2:69272843-69272862 | None:intergenic | 45.0% |
| CAGTGATGCTATATATCCCG+AGG | + | chr5_2:69273134-69273153 | Msa0784640:intron | 45.0% | |
| GTGATGCTATATATCCCGAG+GGG | + | chr5_2:69273136-69273155 | Msa0784640:intron | 45.0% | |
| AATTGGCTGAATGGTGTGTC+GGG | - | chr5_2:69273179-69273198 | None:intergenic | 45.0% | |
| CAATTGGCTGAATGGTGTGT+CGG | - | chr5_2:69273180-69273199 | None:intergenic | 45.0% | |
| ACAAAGCCTGCCATGATTTC+CGG | - | chr5_2:69273217-69273236 | None:intergenic | 45.0% | |
| CGTGGCACAATAATGTCCTT+TGG | - | chr5_2:69273285-69273304 | None:intergenic | 45.0% | |
| TATGGAGGTGGTTACAACCA+CGG | + | chr5_2:69273640-69273659 | Msa0784640:CDS | 45.0% | |
| GGTGGTTACCACAACGATTA+TGG | + | chr5_2:69273688-69273707 | Msa0784640:CDS | 45.0% | |
| !! | AATGGTGGTGGTGGATACAA+TGG | + | chr5_2:69273907-69273926 | Msa0784640:CDS | 45.0% |
| ! | AATGGTGGAGGTGGTTACAA+TGG | + | chr5_2:69273925-69273944 | Msa0784640:CDS | 45.0% |
| GGAGAAGGTAGTTATCACCA+CGG | + | chr5_2:69274057-69274076 | Msa0784640:CDS | 45.0% | |
| AGTGTTGTCCTCAGTTTGGT+CGG | - | chr5_2:69274127-69274146 | None:intergenic | 45.0% | |
| TAGCCAAAAGGCTTAGCATG+AGG | - | chr5_2:69272772-69272791 | None:intergenic | 45.0% | |
| !! | CATGCTAAGCCTTTTGGCTA+TGG | + | chr5_2:69272772-69272791 | Msa0784640:CDS | 45.0% |
| !! | CTCACCCTTTTTAGCATCAG+TGG | - | chr5_2:69272843-69272862 | None:intergenic | 45.0% |
| CAGTGATGCTATATATCCCG+AGG | + | chr5_2:69273134-69273153 | Msa0784640:intron | 45.0% | |
| GTGATGCTATATATCCCGAG+GGG | + | chr5_2:69273136-69273155 | Msa0784640:intron | 45.0% | |
| AATTGGCTGAATGGTGTGTC+GGG | - | chr5_2:69273179-69273198 | None:intergenic | 45.0% | |
| CAATTGGCTGAATGGTGTGT+CGG | - | chr5_2:69273180-69273199 | None:intergenic | 45.0% | |
| ACAAAGCCTGCCATGATTTC+CGG | - | chr5_2:69273217-69273236 | None:intergenic | 45.0% | |
| CGTGGCACAATAATGTCCTT+TGG | - | chr5_2:69273285-69273304 | None:intergenic | 45.0% | |
| TATGGAGGTGGTTACAACCA+CGG | + | chr5_2:69273640-69273659 | Msa0784640:CDS | 45.0% | |
| GGTGGTTACCACAACGATTA+TGG | + | chr5_2:69273688-69273707 | Msa0784640:CDS | 45.0% | |
| !! | AATGGTGGTGGTGGATACAA+TGG | + | chr5_2:69273907-69273926 | Msa0784640:CDS | 45.0% |
| ! | AATGGTGGAGGTGGTTACAA+TGG | + | chr5_2:69273925-69273944 | Msa0784640:CDS | 45.0% |
| GGAGAAGGTAGTTATCACCA+CGG | + | chr5_2:69274057-69274076 | Msa0784640:CDS | 45.0% | |
| AGTGTTGTCCTCAGTTTGGT+CGG | - | chr5_2:69274127-69274146 | None:intergenic | 45.0% | |
| TTTCCTCAGTGATGTCCGCT+AGG | + | chr5_2:69272801-69272820 | Msa0784640:CDS | 50.0% | |
| TTCCTCAGTGATGTCCGCTA+GGG | + | chr5_2:69272802-69272821 | Msa0784640:CDS | 50.0% | |
| GCTTCGTGAAATTTCCCCTC+GGG | - | chr5_2:69273153-69273172 | None:intergenic | 50.0% | |
| GGCTTCGTGAAATTTCCCCT+CGG | - | chr5_2:69273154-69273173 | None:intergenic | 50.0% | |
| CGACACACCATTCAGCCAAT+TGG | + | chr5_2:69273178-69273197 | Msa0784640:intron | 50.0% | |
| CACGTCTATCGGGAAACACT+CGG | + | chr5_2:69273301-69273320 | Msa0784640:intron | 50.0% | |
| ACGTCTATCGGGAAACACTC+GGG | + | chr5_2:69273302-69273321 | Msa0784640:intron | 50.0% | |
| !! | GGTTGTGTTGGTTACAGTGG+TGG | + | chr5_2:69273709-69273728 | Msa0784640:CDS | 50.0% |
| !! | TGTGTTGGTTACAGTGGTGG+AGG | + | chr5_2:69273712-69273731 | Msa0784640:CDS | 50.0% |
| GGTGGAGATGGTTACAACCA+TGG | + | chr5_2:69273739-69273758 | Msa0784640:CDS | 50.0% | |
| GGAGATGGTTACAACCATGG+AGG | + | chr5_2:69273742-69273761 | Msa0784640:CDS | 50.0% | |
| GATGGTTACAACCATGGAGG+TGG | + | chr5_2:69273745-69273764 | Msa0784640:CDS | 50.0% | |
| CATGGTTGTAACCACCTCCA+TGG | - | chr5_2:69273759-69273778 | None:intergenic | 50.0% | |
| CATGGAGGTGGTTACAACCA+TGG | + | chr5_2:69273757-69273776 | Msa0784640:CDS | 50.0% | |
| GGTTGTAACAACCTCCACCA+TGG | - | chr5_2:69273798-69273817 | None:intergenic | 50.0% | |
| GGTGGAGGTTGTTACAACCA+TGG | + | chr5_2:69273799-69273818 | Msa0784640:CDS | 50.0% | |
| GGAGGTTGTTACAACCATGG+TGG | + | chr5_2:69273802-69273821 | Msa0784640:CDS | 50.0% | |
| GGTTGTTACAACCATGGTGG+AGG | + | chr5_2:69273805-69273824 | Msa0784640:CDS | 50.0% | |
| ! | TGTTACAACCATGGTGGAGG+TGG | + | chr5_2:69273808-69273827 | Msa0784640:CDS | 50.0% |
| !! | GGTGGTGGAGGTTATAACCA+CGG | + | chr5_2:69273829-69273848 | Msa0784640:CDS | 50.0% |
| !! | AACGGTGGTGGTGGTTACAA+TGG | + | chr5_2:69273868-69273887 | Msa0784640:CDS | 50.0% |
| GTATCCACCACCACCATTGT+GGG | - | chr5_2:69273905-69273924 | None:intergenic | 50.0% | |
| TGTATCCACCACCACCATTG+TGG | - | chr5_2:69273906-69273925 | None:intergenic | 50.0% | |
| !! | TACAATGGTGGTGGAGGTCA+CGG | + | chr5_2:69273940-69273959 | Msa0784640:CDS | 50.0% |
| GATAACTACCTTCTCCGTGG+TGG | - | chr5_2:69274053-69274072 | None:intergenic | 50.0% | |
| GGTGATAACTACCTTCTCCG+TGG | - | chr5_2:69274056-69274075 | None:intergenic | 50.0% | |
| GAAGGTAGTTATCACCACGG+TGG | + | chr5_2:69274060-69274079 | Msa0784640:CDS | 50.0% | |
| TTTCCTCAGTGATGTCCGCT+AGG | + | chr5_2:69272801-69272820 | Msa0784640:CDS | 50.0% | |
| TTCCTCAGTGATGTCCGCTA+GGG | + | chr5_2:69272802-69272821 | Msa0784640:CDS | 50.0% | |
| GCTTCGTGAAATTTCCCCTC+GGG | - | chr5_2:69273153-69273172 | None:intergenic | 50.0% | |
| GGCTTCGTGAAATTTCCCCT+CGG | - | chr5_2:69273154-69273173 | None:intergenic | 50.0% | |
| CGACACACCATTCAGCCAAT+TGG | + | chr5_2:69273178-69273197 | Msa0784640:intron | 50.0% | |
| CACGTCTATCGGGAAACACT+CGG | + | chr5_2:69273301-69273320 | Msa0784640:intron | 50.0% | |
| ACGTCTATCGGGAAACACTC+GGG | + | chr5_2:69273302-69273321 | Msa0784640:intron | 50.0% | |
| !! | GGTTGTGTTGGTTACAGTGG+TGG | + | chr5_2:69273709-69273728 | Msa0784640:CDS | 50.0% |
| !! | TGTGTTGGTTACAGTGGTGG+AGG | + | chr5_2:69273712-69273731 | Msa0784640:CDS | 50.0% |
| GGTGGAGATGGTTACAACCA+TGG | + | chr5_2:69273739-69273758 | Msa0784640:CDS | 50.0% | |
| GGAGATGGTTACAACCATGG+AGG | + | chr5_2:69273742-69273761 | Msa0784640:CDS | 50.0% | |
| GATGGTTACAACCATGGAGG+TGG | + | chr5_2:69273745-69273764 | Msa0784640:CDS | 50.0% | |
| CATGGTTGTAACCACCTCCA+TGG | - | chr5_2:69273759-69273778 | None:intergenic | 50.0% | |
| CATGGAGGTGGTTACAACCA+TGG | + | chr5_2:69273757-69273776 | Msa0784640:CDS | 50.0% | |
| GGTTGTAACAACCTCCACCA+TGG | - | chr5_2:69273798-69273817 | None:intergenic | 50.0% | |
| GGTGGAGGTTGTTACAACCA+TGG | + | chr5_2:69273799-69273818 | Msa0784640:CDS | 50.0% | |
| GGAGGTTGTTACAACCATGG+TGG | + | chr5_2:69273802-69273821 | Msa0784640:CDS | 50.0% | |
| GGTTGTTACAACCATGGTGG+AGG | + | chr5_2:69273805-69273824 | Msa0784640:CDS | 50.0% | |
| ! | TGTTACAACCATGGTGGAGG+TGG | + | chr5_2:69273808-69273827 | Msa0784640:CDS | 50.0% |
| !! | GGTGGTGGAGGTTATAACCA+CGG | + | chr5_2:69273829-69273848 | Msa0784640:CDS | 50.0% |
| !! | AACGGTGGTGGTGGTTACAA+TGG | + | chr5_2:69273868-69273887 | Msa0784640:CDS | 50.0% |
| GTATCCACCACCACCATTGT+GGG | - | chr5_2:69273905-69273924 | None:intergenic | 50.0% | |
| TGTATCCACCACCACCATTG+TGG | - | chr5_2:69273906-69273925 | None:intergenic | 50.0% | |
| !! | TACAATGGTGGTGGAGGTCA+CGG | + | chr5_2:69273940-69273959 | Msa0784640:CDS | 50.0% |
| GATAACTACCTTCTCCGTGG+TGG | - | chr5_2:69274053-69274072 | None:intergenic | 50.0% | |
| GGTGATAACTACCTTCTCCG+TGG | - | chr5_2:69274056-69274075 | None:intergenic | 50.0% | |
| GAAGGTAGTTATCACCACGG+TGG | + | chr5_2:69274060-69274079 | Msa0784640:CDS | 50.0% | |
| CGAGTGTTTCCCGATAGACG+TGG | - | chr5_2:69273303-69273322 | None:intergenic | 55.0% | |
| ACACTCGGGATGCAACCTGT+CGG | + | chr5_2:69273316-69273335 | Msa0784640:intron | 55.0% | |
| GGTGGAGGTGGTTACAACCA+CGG | + | chr5_2:69273661-69273680 | Msa0784640:CDS | 55.0% | |
| ! | GTTGGTTACAGTGGTGGAGG+TGG | + | chr5_2:69273715-69273734 | Msa0784640:CDS | 55.0% |
| GGAGGTGGTTACAACCATGG+TGG | + | chr5_2:69273760-69273779 | Msa0784640:CDS | 55.0% | |
| GGTGGTTACAACCATGGTGG+AGG | + | chr5_2:69273763-69273782 | Msa0784640:CDS | 55.0% | |
| ! | GGTTACAACCATGGTGGAGG+TGG | + | chr5_2:69273766-69273785 | Msa0784640:CDS | 55.0% |
| GGTTGTAACCACCTCCACCA+TGG | - | chr5_2:69273777-69273796 | None:intergenic | 55.0% | |
| GGTGGAGGTGGTTACAACCA+TGG | + | chr5_2:69273661-69273680 | Msa0784640:CDS | 55.0% | |
| GGAGGTGGTTACAACCATGG+TGG | + | chr5_2:69273760-69273779 | Msa0784640:CDS | 55.0% | |
| GGTGGTTACAACCATGGTGG+AGG | + | chr5_2:69273763-69273782 | Msa0784640:CDS | 55.0% | |
| ! | TACAACCATGGTGGAGGTGG+TGG | + | chr5_2:69273769-69273788 | Msa0784640:CDS | 55.0% |
| GGTGGAGGTTATAACCACGG+TGG | + | chr5_2:69273832-69273851 | Msa0784640:CDS | 55.0% | |
| GGAGGTTATAACCACGGTGG+TGG | + | chr5_2:69273835-69273854 | Msa0784640:CDS | 55.0% | |
| ! | GGTTATAACCACGGTGGTGG+TGG | + | chr5_2:69273838-69273857 | Msa0784640:CDS | 55.0% |
| !! | GGTGGTGGTGGTTACCACAA+CGG | + | chr5_2:69273850-69273869 | Msa0784640:CDS | 55.0% |
| TGTAACCACCACCACCGTTG+TGG | - | chr5_2:69273867-69273886 | None:intergenic | 55.0% | |
| !! | GGTGGTGGTGGTTACAATGG+TGG | + | chr5_2:69273871-69273890 | Msa0784640:CDS | 55.0% |
| ! | GGTGGTGGTTACAATGGTGG+AGG | + | chr5_2:69273874-69273893 | Msa0784640:CDS | 55.0% |
| ! | GGTGGTTACAATGGTGGAGG+TGG | + | chr5_2:69273877-69273896 | Msa0784640:CDS | 55.0% |
| !! | GGTGGTGGTGGATACAATGG+TGG | + | chr5_2:69273910-69273929 | Msa0784640:CDS | 55.0% |
| !! | GGTGGTGGATACAATGGTGG+AGG | + | chr5_2:69273913-69273932 | Msa0784640:CDS | 55.0% |
| ! | GGTGGATACAATGGTGGAGG+TGG | + | chr5_2:69273916-69273935 | Msa0784640:CDS | 55.0% |
| GGTGGAGGTGGTTACAATGG+TGG | + | chr5_2:69273928-69273947 | Msa0784640:CDS | 55.0% | |
| GGAGGTGGTTACAATGGTGG+TGG | + | chr5_2:69273931-69273950 | Msa0784640:CDS | 55.0% | |
| !! | GGTGGTTACAATGGTGGTGG+AGG | + | chr5_2:69273934-69273953 | Msa0784640:CDS | 55.0% |
| GTCTGTTGCCGTGCAAACTG+AGG | + | chr5_2:69273981-69274000 | Msa0784640:CDS | 55.0% | |
| ! | GGTGGTGGTAGTTACCACCA+CGG | + | chr5_2:69274036-69274055 | Msa0784640:CDS | 55.0% |
| GGTAGTTACCACCACGGAGA+AGG | + | chr5_2:69274042-69274061 | Msa0784640:CDS | 55.0% | |
| GGTAGTTATCACCACGGTGG+AGG | + | chr5_2:69274063-69274082 | Msa0784640:CDS | 55.0% | |
| AGTTATCACCACGGTGGAGG+TGG | + | chr5_2:69274066-69274085 | Msa0784640:CDS | 55.0% | |
| CGAGTGTTTCCCGATAGACG+TGG | - | chr5_2:69273303-69273322 | None:intergenic | 55.0% | |
| ACACTCGGGATGCAACCTGT+CGG | + | chr5_2:69273316-69273335 | Msa0784640:intron | 55.0% | |
| GGTGGAGGTGGTTACAACCA+CGG | + | chr5_2:69273661-69273680 | Msa0784640:CDS | 55.0% | |
| ! | GTTGGTTACAGTGGTGGAGG+TGG | + | chr5_2:69273715-69273734 | Msa0784640:CDS | 55.0% |
| GGAGGTGGTTACAACCATGG+TGG | + | chr5_2:69273760-69273779 | Msa0784640:CDS | 55.0% | |
| GGTGGTTACAACCATGGTGG+AGG | + | chr5_2:69273763-69273782 | Msa0784640:CDS | 55.0% | |
| ! | GGTTACAACCATGGTGGAGG+TGG | + | chr5_2:69273766-69273785 | Msa0784640:CDS | 55.0% |
| GGTTGTAACCACCTCCACCA+TGG | - | chr5_2:69273777-69273796 | None:intergenic | 55.0% | |
| GGTGGAGGTGGTTACAACCA+TGG | + | chr5_2:69273661-69273680 | Msa0784640:CDS | 55.0% | |
| GGAGGTGGTTACAACCATGG+TGG | + | chr5_2:69273760-69273779 | Msa0784640:CDS | 55.0% | |
| GGTGGTTACAACCATGGTGG+AGG | + | chr5_2:69273763-69273782 | Msa0784640:CDS | 55.0% | |
| ! | TACAACCATGGTGGAGGTGG+TGG | + | chr5_2:69273769-69273788 | Msa0784640:CDS | 55.0% |
| GGTGGAGGTTATAACCACGG+TGG | + | chr5_2:69273832-69273851 | Msa0784640:CDS | 55.0% | |
| GGAGGTTATAACCACGGTGG+TGG | + | chr5_2:69273835-69273854 | Msa0784640:CDS | 55.0% | |
| ! | GGTTATAACCACGGTGGTGG+TGG | + | chr5_2:69273838-69273857 | Msa0784640:CDS | 55.0% |
| !! | GGTGGTGGTGGTTACCACAA+CGG | + | chr5_2:69273850-69273869 | Msa0784640:CDS | 55.0% |
| TGTAACCACCACCACCGTTG+TGG | - | chr5_2:69273867-69273886 | None:intergenic | 55.0% | |
| !! | GGTGGTGGTGGTTACAATGG+TGG | + | chr5_2:69273871-69273890 | Msa0784640:CDS | 55.0% |
| ! | GGTGGTGGTTACAATGGTGG+AGG | + | chr5_2:69273874-69273893 | Msa0784640:CDS | 55.0% |
| ! | GGTGGTTACAATGGTGGAGG+TGG | + | chr5_2:69273877-69273896 | Msa0784640:CDS | 55.0% |
| !! | GGTGGTGGTGGATACAATGG+TGG | + | chr5_2:69273910-69273929 | Msa0784640:CDS | 55.0% |
| !! | GGTGGTGGATACAATGGTGG+AGG | + | chr5_2:69273913-69273932 | Msa0784640:CDS | 55.0% |
| ! | GGTGGATACAATGGTGGAGG+TGG | + | chr5_2:69273916-69273935 | Msa0784640:CDS | 55.0% |
| GGTGGAGGTGGTTACAATGG+TGG | + | chr5_2:69273928-69273947 | Msa0784640:CDS | 55.0% | |
| GGAGGTGGTTACAATGGTGG+TGG | + | chr5_2:69273931-69273950 | Msa0784640:CDS | 55.0% | |
| !! | GGTGGTTACAATGGTGGTGG+AGG | + | chr5_2:69273934-69273953 | Msa0784640:CDS | 55.0% |
| GTCTGTTGCCGTGCAAACTG+AGG | + | chr5_2:69273981-69274000 | Msa0784640:CDS | 55.0% | |
| ! | GGTGGTGGTAGTTACCACCA+CGG | + | chr5_2:69274036-69274055 | Msa0784640:CDS | 55.0% |
| GGTAGTTACCACCACGGAGA+AGG | + | chr5_2:69274042-69274061 | Msa0784640:CDS | 55.0% | |
| GGTAGTTATCACCACGGTGG+AGG | + | chr5_2:69274063-69274082 | Msa0784640:CDS | 55.0% | |
| AGTTATCACCACGGTGGAGG+TGG | + | chr5_2:69274066-69274085 | Msa0784640:CDS | 55.0% | |
| ! | GTCCCTAGCGGACATCACTG+AGG | - | chr5_2:69272807-69272826 | None:intergenic | 60.0% |
| GGCTGAATGGTGTGTCGGGA+CGG | - | chr5_2:69273175-69273194 | None:intergenic | 60.0% | |
| CACTCGGGATGCAACCTGTC+GGG | + | chr5_2:69273317-69273336 | Msa0784640:intron | 60.0% | |
| GGAGGTGGTTACAACCACGG+TGG | + | chr5_2:69273643-69273662 | Msa0784640:CDS | 60.0% | |
| GGTGGTTACAACCACGGTGG+AGG | + | chr5_2:69273646-69273665 | Msa0784640:CDS | 60.0% | |
| GGTTACAACCACGGTGGAGG+TGG | + | chr5_2:69273649-69273668 | Msa0784640:CDS | 60.0% | |
| GGTTGTAACCACCTCCACCG+TGG | - | chr5_2:69273660-69273679 | None:intergenic | 60.0% | |
| GGAGGTGGTTACAACCACGG+TGG | + | chr5_2:69273643-69273662 | Msa0784640:CDS | 60.0% | |
| GGTGGTTACAACCACGGTGG+AGG | + | chr5_2:69273646-69273665 | Msa0784640:CDS | 60.0% | |
| GGTTACAACCACGGTGGAGG+TGG | + | chr5_2:69273649-69273668 | Msa0784640:CDS | 60.0% | |
| TGTGGTAACCACCTCCACCG+TGG | - | chr5_2:69273681-69273700 | None:intergenic | 60.0% | |
| ! | GGTTACAGTGGTGGAGGTGG+TGG | + | chr5_2:69273718-69273737 | Msa0784640:CDS | 60.0% |
| ! | TACAGTGGTGGAGGTGGTGG+TGG | + | chr5_2:69273721-69273740 | Msa0784640:CDS | 60.0% |
| ! | AACCATGGTGGAGGTGGTGG+TGG | + | chr5_2:69273814-69273833 | Msa0784640:CDS | 60.0% |
| TGTGGTAACCACCACCACCG+TGG | - | chr5_2:69273849-69273868 | None:intergenic | 60.0% | |
| ! | GGTGGTGGTTACCACAACGG+TGG | + | chr5_2:69273853-69273872 | Msa0784640:CDS | 60.0% |
| GGTGGTTACCACAACGGTGG+TGG | + | chr5_2:69273856-69273875 | Msa0784640:CDS | 60.0% | |
| ! | GGTTACCACAACGGTGGTGG+TGG | + | chr5_2:69273859-69273878 | Msa0784640:CDS | 60.0% |
| GGTGGAGGTGGTTCCCACAA+TGG | + | chr5_2:69273889-69273908 | Msa0784640:CDS | 60.0% | |
| GGAGGTGGTTCCCACAATGG+TGG | + | chr5_2:69273892-69273911 | Msa0784640:CDS | 60.0% | |
| GGTGGTTCCCACAATGGTGG+TGG | + | chr5_2:69273895-69273914 | Msa0784640:CDS | 60.0% | |
| !! | GGTTCCCACAATGGTGGTGG+TGG | + | chr5_2:69273898-69273917 | Msa0784640:CDS | 60.0% |
| !! | AATGGTGGTGGAGGTCACGG+TGG | + | chr5_2:69273943-69273962 | Msa0784640:CDS | 60.0% |
| CATGGTGGCCATGGTGGTCA+CGG | + | chr5_2:69274099-69274118 | Msa0784640:CDS | 60.0% | |
| !! | TCACGGTGCCGACCAAACTG+AGG | + | chr5_2:69274116-69274135 | Msa0784640:CDS | 60.0% |
| ! | GTCCCTAGCGGACATCACTG+AGG | - | chr5_2:69272807-69272826 | None:intergenic | 60.0% |
| GGCTGAATGGTGTGTCGGGA+CGG | - | chr5_2:69273175-69273194 | None:intergenic | 60.0% | |
| CACTCGGGATGCAACCTGTC+GGG | + | chr5_2:69273317-69273336 | Msa0784640:intron | 60.0% | |
| GGAGGTGGTTACAACCACGG+TGG | + | chr5_2:69273643-69273662 | Msa0784640:CDS | 60.0% | |
| GGTGGTTACAACCACGGTGG+AGG | + | chr5_2:69273646-69273665 | Msa0784640:CDS | 60.0% | |
| GGTTACAACCACGGTGGAGG+TGG | + | chr5_2:69273649-69273668 | Msa0784640:CDS | 60.0% | |
| GGTTGTAACCACCTCCACCG+TGG | - | chr5_2:69273660-69273679 | None:intergenic | 60.0% | |
| GGAGGTGGTTACAACCACGG+TGG | + | chr5_2:69273643-69273662 | Msa0784640:CDS | 60.0% | |
| GGTGGTTACAACCACGGTGG+AGG | + | chr5_2:69273646-69273665 | Msa0784640:CDS | 60.0% | |
| GGTTACAACCACGGTGGAGG+TGG | + | chr5_2:69273649-69273668 | Msa0784640:CDS | 60.0% | |
| TGTGGTAACCACCTCCACCG+TGG | - | chr5_2:69273681-69273700 | None:intergenic | 60.0% | |
| ! | GGTTACAGTGGTGGAGGTGG+TGG | + | chr5_2:69273718-69273737 | Msa0784640:CDS | 60.0% |
| ! | TACAGTGGTGGAGGTGGTGG+TGG | + | chr5_2:69273721-69273740 | Msa0784640:CDS | 60.0% |
| ! | AACCATGGTGGAGGTGGTGG+TGG | + | chr5_2:69273814-69273833 | Msa0784640:CDS | 60.0% |
| TGTGGTAACCACCACCACCG+TGG | - | chr5_2:69273849-69273868 | None:intergenic | 60.0% | |
| ! | GGTGGTGGTTACCACAACGG+TGG | + | chr5_2:69273853-69273872 | Msa0784640:CDS | 60.0% |
| GGTGGTTACCACAACGGTGG+TGG | + | chr5_2:69273856-69273875 | Msa0784640:CDS | 60.0% | |
| ! | GGTTACCACAACGGTGGTGG+TGG | + | chr5_2:69273859-69273878 | Msa0784640:CDS | 60.0% |
| GGTGGAGGTGGTTCCCACAA+TGG | + | chr5_2:69273889-69273908 | Msa0784640:CDS | 60.0% | |
| GGAGGTGGTTCCCACAATGG+TGG | + | chr5_2:69273892-69273911 | Msa0784640:CDS | 60.0% | |
| GGTGGTTCCCACAATGGTGG+TGG | + | chr5_2:69273895-69273914 | Msa0784640:CDS | 60.0% | |
| !! | GGTTCCCACAATGGTGGTGG+TGG | + | chr5_2:69273898-69273917 | Msa0784640:CDS | 60.0% |
| !! | AATGGTGGTGGAGGTCACGG+TGG | + | chr5_2:69273943-69273962 | Msa0784640:CDS | 60.0% |
| CATGGTGGCCATGGTGGTCA+CGG | + | chr5_2:69274099-69274118 | Msa0784640:CDS | 60.0% | |
| !! | TCACGGTGCCGACCAAACTG+AGG | + | chr5_2:69274116-69274135 | Msa0784640:CDS | 60.0% |
| !! | GGTGGAGGTGGTGGTGGAGA+TGG | + | chr5_2:69273727-69273746 | Msa0784640:CDS | 65.0% |
| CTCCACCACCACCTCCACCA+TGG | - | chr5_2:69273726-69273745 | None:intergenic | 65.0% | |
| !! | CATGGTGGAGGTGGTGGTGG+AGG | + | chr5_2:69273817-69273836 | Msa0784640:CDS | 65.0% |
| GGTGGAGGTCACGGTGGTCA+TGG | + | chr5_2:69273949-69273968 | Msa0784640:CDS | 65.0% | |
| GGAGGTCACGGTGGTCATGG+CGG | + | chr5_2:69273952-69273971 | Msa0784640:CDS | 65.0% | |
| CACCACGGTGGAGGTGGTCA+CGG | + | chr5_2:69274072-69274091 | Msa0784640:CDS | 65.0% | |
| GGAGGTGGTCACGGTGGACA+TGG | + | chr5_2:69274081-69274100 | Msa0784640:CDS | 65.0% | |
| GGTGGTCACGGTGGACATGG+TGG | + | chr5_2:69274084-69274103 | Msa0784640:CDS | 65.0% | |
| CACGGTGGACATGGTGGCCA+TGG | + | chr5_2:69274090-69274109 | Msa0784640:CDS | 65.0% | |
| GGTGGACATGGTGGCCATGG+TGG | + | chr5_2:69274093-69274112 | Msa0784640:CDS | 65.0% | |
| !! | GGTGGAGGTGGTGGTGGAGA+TGG | + | chr5_2:69273727-69273746 | Msa0784640:CDS | 65.0% |
| CTCCACCACCACCTCCACCA+TGG | - | chr5_2:69273726-69273745 | None:intergenic | 65.0% | |
| !! | CATGGTGGAGGTGGTGGTGG+AGG | + | chr5_2:69273817-69273836 | Msa0784640:CDS | 65.0% |
| GGTGGAGGTCACGGTGGTCA+TGG | + | chr5_2:69273949-69273968 | Msa0784640:CDS | 65.0% | |
| GGAGGTCACGGTGGTCATGG+CGG | + | chr5_2:69273952-69273971 | Msa0784640:CDS | 65.0% | |
| CACCACGGTGGAGGTGGTCA+CGG | + | chr5_2:69274072-69274091 | Msa0784640:CDS | 65.0% | |
| GGAGGTGGTCACGGTGGACA+TGG | + | chr5_2:69274081-69274100 | Msa0784640:CDS | 65.0% | |
| GGTGGTCACGGTGGACATGG+TGG | + | chr5_2:69274084-69274103 | Msa0784640:CDS | 65.0% | |
| CACGGTGGACATGGTGGCCA+TGG | + | chr5_2:69274090-69274109 | Msa0784640:CDS | 65.0% | |
| GGTGGACATGGTGGCCATGG+TGG | + | chr5_2:69274093-69274112 | Msa0784640:CDS | 65.0% | |
| CACCGTGACCACCTCCACCG+TGG | - | chr5_2:69274077-69274096 | None:intergenic | 70.0% | |
| CACGGTGGAGGTGGTCACGG+TGG | + | chr5_2:69274075-69274094 | Msa0784640:CDS | 70.0% | |
| GGTCGGCACCGTGACCACCA+TGG | - | chr5_2:69274110-69274129 | None:intergenic | 70.0% | |
| CACCGTGACCACCTCCACCG+TGG | - | chr5_2:69274077-69274096 | None:intergenic | 70.0% | |
| CACGGTGGAGGTGGTCACGG+TGG | + | chr5_2:69274075-69274094 | Msa0784640:CDS | 70.0% | |
| GGTCGGCACCGTGACCACCA+TGG | - | chr5_2:69274110-69274129 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 69272749 | 69274155 | 69272749 | ID=Msa0784640;Name=Msa0784640 |
| chr5_2 | mRNA | 69272749 | 69274155 | 69272749 | ID=Msa0784640-mRNA-1;Parent=Msa0784640;Name=Msa0784640-mRNA-1;_AED=0.16;_eAED=0.17;_QI=0|0|0|1|1|1|2|0|220 |
| chr5_2 | exon | 69272749 | 69272857 | 69272749 | ID=Msa0784640-mRNA-1:exon:20836;Parent=Msa0784640-mRNA-1 |
| chr5_2 | exon | 69273602 | 69274155 | 69273602 | ID=Msa0784640-mRNA-1:exon:20837;Parent=Msa0784640-mRNA-1 |
| chr5_2 | CDS | 69272749 | 69272857 | 69272749 | ID=Msa0784640-mRNA-1:cds;Parent=Msa0784640-mRNA-1 |
| chr5_2 | CDS | 69273602 | 69274155 | 69273602 | ID=Msa0784640-mRNA-1:cds;Parent=Msa0784640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
