AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0092710


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0092710 MtrunA17_Chr1g0209861 96.330 436 16 0 1 436 1 436 0.0 872
Msa0092710 MtrunA17_Chr8g0390971 41.372 452 188 18 9 433 11 412 2.67e-82 259
Msa0092710 MtrunA17_Chr5g0431351 44.144 111 42 3 316 424 124 216 4.72e-19 85.5
Msa0092710 MtrunA17_Chr7g0226451 40.152 132 56 4 316 424 220 351 4.58e-17 82.4
Msa0092710 MtrunA17_Chr4g0071811 46.154 104 44 4 321 424 293 384 5.21e-17 82.4
Msa0092710 MtrunA17_Chr1g0150471 47.561 82 36 2 351 427 221 300 1.97e-12 67.8
Msa0092710 MtrunA17_Chr3g0136701 63.636 55 16 1 370 424 224 274 3.65e-12 66.6
Msa0092710 MtrunA17_Chr7g0220721 69.767 43 13 0 382 424 327 369 7.73e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0092710 AT1G25440.1 45.622 434 188 10 6 424 3 403 7.23e-103 312
Msa0092710 AT1G68520.1 44.018 443 188 16 6 429 3 404 3.08e-91 282
Msa0092710 AT1G73870.1 38.149 443 190 19 8 427 9 390 4.02e-65 214
Msa0092710 AT4G25990.1 49.533 107 38 3 318 424 293 383 8.99e-22 97.1
Msa0092710 AT5G57180.2 45.217 115 43 3 318 431 337 432 2.66e-21 96.3
Msa0092710 AT1G49130.1 40.164 122 65 3 15 128 23 144 2.88e-19 89.0
Msa0092710 AT1G49130.1 45.794 107 37 3 319 425 236 321 7.29e-17 81.6
Msa0092710 AT1G49130.2 40.164 122 65 3 15 128 16 137 3.01e-19 88.6
Msa0092710 AT1G49130.2 45.794 107 37 3 319 425 229 314 9.55e-17 81.3
Msa0092710 AT4G25990.2 43.443 122 38 4 318 424 293 398 2.83e-18 87.0
Msa0092710 AT5G14370.1 38.028 142 73 4 291 424 202 336 5.08e-18 85.5
Msa0092710 AT4G25990.3 47.525 101 37 3 318 418 293 377 5.11e-18 85.9
Msa0092710 AT1G07050.1 43.750 128 45 5 303 426 91 195 2.02e-17 80.9
Msa0092710 AT5G57180.1 45.098 102 36 3 318 418 337 419 8.05e-17 82.4
Msa0092710 AT1G07050.2 41.667 120 43 5 303 418 91 187 5.02e-13 68.2
Msa0092710 AT5G24930.1 52.113 71 28 1 360 424 267 337 1.28e-11 66.2
Msa0092710 AT5G15840.1 52.308 65 28 2 1 62 41 105 8.45e-11 63.9

Find 106 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGGTGTTCTTGCCTTCT+TGG 0.140899 1_2:+75433362 None:intergenic
GAAGAATTCATCACCATTAA+TGG 0.149936 1_2:+75433410 None:intergenic
ACAAATCTCCCTTTCATTCT+TGG 0.172964 1_2:+75431658 None:intergenic
ATTATTTATCAGGGAACTTT+TGG 0.202916 1_2:-75431850 Msa0092710:intron
TGAAAATAATGATTATAATA+AGG 0.203891 1_2:-75432704 Msa0092710:CDS
TGAACTTTGAAATATGAATT+TGG 0.207298 1_2:+75433688 None:intergenic
TTCTCATCAGCATCCAAATT+TGG 0.222169 1_2:+75432592 None:intergenic
ATTTGCTAAAAGTAATAATT+TGG 0.227746 1_2:-75431538 Msa0092710:three_prime_UTR
TTTCATCTTGTGCCGGATTT+AGG 0.234999 1_2:-75433273 Msa0092710:CDS
TGGTTTGAGTGAAACTTTAT+TGG 0.235328 1_2:-75431447 Msa0092710:three_prime_UTR
TTGTTAACACCTGACAAATT+AGG 0.244804 1_2:+75433724 None:intergenic
TATGGTGAGTTTGGTGGATA+TGG 0.250845 1_2:-75431808 Msa0092710:CDS
ATGAAGCGCAACTTCTTTAC+AGG 0.254107 1_2:-75433215 Msa0092710:CDS
TAATGGTGACAAGCCAAATT+TGG 0.271510 1_2:-75432605 Msa0092710:CDS
CTGCCTCCATCTACCGTTAC+TGG 0.277791 1_2:+75431778 None:intergenic
GAAAATAATGATTATAATAA+GGG 0.279237 1_2:-75432703 Msa0092710:CDS
GCGTCGTACAAGTCCATTAA+TGG 0.290118 1_2:-75433423 Msa0092710:CDS
ACGGAGGTTCATTATGCTTA+TGG 0.290853 1_2:-75431826 Msa0092710:CDS
CTCAACATCAGCTGCAAATT+CGG 0.302034 1_2:+75432981 None:intergenic
GCAACAGAAGGATCGAAAAT+TGG 0.331767 1_2:+75433189 None:intergenic
CATTATGCTTATGGTGAGTT+TGG 0.336402 1_2:-75431817 Msa0092710:CDS
TTCTTGGTGAAGCCAGAAAA+AGG 0.344434 1_2:+75433378 None:intergenic
GGTTGTTCTCAAAGAAAATA+AGG 0.347288 1_2:-75431714 Msa0092710:CDS
TTCCCTTCACCTAATTTGTC+AGG 0.352541 1_2:-75433733 Msa0092710:five_prime_UTR
GATTAGAAAATGAGTGTATA+GGG 0.361641 1_2:-75432942 Msa0092710:CDS
CATTAGTCCAGGGACACTTT+TGG 0.361781 1_2:+75432623 None:intergenic
AGCTGATGTTGAGAGCTTAT+TGG 0.374691 1_2:-75432971 Msa0092710:CDS
AGAAAATAAGGTACGAGGTT+AGG 0.382846 1_2:-75431702 Msa0092710:CDS
GGATTAGAAAATGAGTGTAT+AGG 0.385257 1_2:-75432943 Msa0092710:CDS
GCTGATGTTGAGAGCTTATT+GGG 0.387062 1_2:-75432970 Msa0092710:CDS
CAAAAGTGTCCCTGGACTAA+TGG 0.395385 1_2:-75432622 Msa0092710:CDS
ATTCCTCGCTGGTTCGCTGC+TGG 0.398768 1_2:+75433311 None:intergenic
TGTCATCCAGTAACGGTAGA+TGG 0.408098 1_2:-75431784 Msa0092710:CDS
CTCTCATTGTATTTAACATC+AGG 0.418189 1_2:+75433087 None:intergenic
GGAGATAATATGATGGAGAT+TGG 0.419606 1_2:-75432814 Msa0092710:CDS
GAAGGCAAGAACACCAAGAC+AGG 0.424009 1_2:-75433358 Msa0092710:CDS
TAGGGAGAGGAAAAGGGAAA+AGG 0.427942 1_2:+75433767 None:intergenic
GCAGAGAGGCAAGGGTTTCA+AGG 0.431755 1_2:-75431759 Msa0092710:CDS
TGTATAGGGATGGAAGAGTT+GGG 0.440723 1_2:-75432928 Msa0092710:CDS
ATAAATTATACCATGCAATC+AGG 0.445629 1_2:+75432565 None:intergenic
GATTTGTGTTTCCCCTGTCT+TGG 0.455579 1_2:+75433345 None:intergenic
TGAAAGGGAGATTTGTGAAG+AGG 0.460030 1_2:-75431651 Msa0092710:CDS
ATTTGGATGCTGATGAGAAC+TGG 0.465263 1_2:-75432588 Msa0092710:CDS
GTGTATAGGGATGGAAGAGT+TGG 0.474392 1_2:-75432929 Msa0092710:CDS
TGGCTTGTCACCATTAGTCC+AGG 0.479305 1_2:+75432612 None:intergenic
AAATCCGGCACAAGATGAAA+CGG 0.483022 1_2:+75433276 None:intergenic
AGTGAGAAGTGGAAGTGTAG+TGG 0.486251 1_2:-75432880 Msa0092710:CDS
CCTTCAGTTGGTTCAACTGA+AGG 0.490709 1_2:-75433147 Msa0092710:CDS
GTTGAGAGCTTATTGGGTAG+GGG 0.493508 1_2:-75432964 Msa0092710:CDS
TGTACTAGTCCTCCTTCAGT+TGG 0.493939 1_2:-75433159 Msa0092710:CDS
CTGTTGGAGGCAAAACTGCT+AGG 0.494037 1_2:-75433584 Msa0092710:CDS
AGTGGAAAGGTGAAGGAAGA+AGG 0.494618 1_2:-75432862 Msa0092710:CDS
TGTTGAGAGCTTATTGGGTA+GGG 0.498854 1_2:-75432965 Msa0092710:CDS
TATGCTTATGGTGAGTTTGG+TGG 0.509644 1_2:-75431814 Msa0092710:CDS
AGAGAGCTATGAAATTGTTG+AGG 0.512413 1_2:-75432836 Msa0092710:CDS
AGATGGAGGCAGAGAGGCAA+GGG 0.513332 1_2:-75431767 Msa0092710:CDS
GAAAGGGAGATTTGTGAAGA+GGG 0.514753 1_2:-75431650 Msa0092710:CDS
GAGAAGAGACCAAGAATGAA+AGG 0.514881 1_2:-75431667 Msa0092710:CDS
ATATTATTATTATTCCTCGC+TGG 0.519712 1_2:+75433300 None:intergenic
GAGAGCTATGAAATTGTTGA+GGG 0.520749 1_2:-75432835 Msa0092710:CDS
GGGATAGCCAAAAGTGTCCC+TGG 0.521182 1_2:-75432630 Msa0092710:CDS
AATCCGGCACAAGATGAAAC+GGG 0.522679 1_2:+75433277 None:intergenic
ATGTTGAGAGCTTATTGGGT+AGG 0.523810 1_2:-75432966 Msa0092710:CDS
GGTTCAACTGAAGGAGGACT+AGG 0.524616 1_2:-75433138 Msa0092710:CDS
ACTTCATCGAAACCTAAATC+CGG 0.535576 1_2:+75433261 None:intergenic
CACCTGACAAATTAGGTGAA+GGG 0.550785 1_2:+75433731 None:intergenic
TGAAACACTTGAAGAGGTGA+AGG 0.552820 1_2:-75432746 Msa0092710:CDS
AACGTAGCAAACGCTGTTGG+AGG 0.555203 1_2:-75433597 Msa0092710:CDS
GAAGAGGTGAAGGAGAAGTG+TGG 0.556028 1_2:-75432736 Msa0092710:CDS
CCTCGCTGGTTCGCTGCTGG+AGG 0.557584 1_2:+75433314 None:intergenic
TTCTCATGAAACACTTGAAG+AGG 0.559028 1_2:-75432752 Msa0092710:CDS
ATGATGCAGTAATCATTGCA+TGG 0.567325 1_2:-75432651 Msa0092710:CDS
TCGGCTAATTCAATATCAGA+TGG 0.569236 1_2:+75433000 None:intergenic
AGAAGAGACCAAGAATGAAA+GGG 0.570209 1_2:-75431666 Msa0092710:CDS
GAAGTGTAGTGGAAAGGTGA+AGG 0.573136 1_2:-75432869 Msa0092710:CDS
TGATGCAGTAATCATTGCAT+GGG 0.576146 1_2:-75432650 Msa0092710:CDS
AGCATGAGGAGAGTGAGAAG+TGG 0.578354 1_2:-75432891 Msa0092710:CDS
TAGATGGAGGCAGAGAGGCA+AGG 0.578587 1_2:-75431768 Msa0092710:CDS
GGCTTGTCACCATTAGTCCA+GGG 0.579867 1_2:+75432613 None:intergenic
TGTTGAGGGAGATAATATGA+TGG 0.580179 1_2:-75432821 Msa0092710:CDS
AAAATAATGATTATAATAAG+GGG 0.580910 1_2:-75432702 Msa0092710:CDS
TGTTGGAGGCAAAACTGCTA+GGG 0.581207 1_2:-75433583 Msa0092710:CDS
TATCCCGTTTCATCTTGTGC+CGG 0.584262 1_2:-75433280 Msa0092710:CDS
TCAGTTGGTTCAACTGAAGG+AGG 0.585447 1_2:-75433144 Msa0092710:CDS
ACACCTGACAAATTAGGTGA+AGG 0.585651 1_2:+75433730 None:intergenic
AGAAAATGAGTGTATAGGGA+TGG 0.586862 1_2:-75432938 Msa0092710:CDS
GGTGATGAATTCTTCAATTG+TGG 0.591451 1_2:-75433402 Msa0092710:CDS
AGGAAATGTTGGAACTGCAA+AGG 0.601959 1_2:+75431624 None:intergenic
CCTTCAGTTGAACCAACTGA+AGG 0.603328 1_2:+75433147 None:intergenic
TGAGAACTGGCCTGATTGCA+TGG 0.605682 1_2:-75432575 Msa0092710:intron
TCAGTTGAACCAACTGAAGG+AGG 0.611596 1_2:+75433150 None:intergenic
ATTGATTGATACAAAGCATG+AGG 0.625826 1_2:-75432905 Msa0092710:CDS
TAGTGATAATAATTATGAGA+TGG 0.628845 1_2:-75433043 Msa0092710:CDS
TGAAGCGCAACTTCTTTACA+GGG 0.630911 1_2:-75433214 Msa0092710:CDS
GTACATAATTCAGCAACAGA+AGG 0.631423 1_2:+75433177 None:intergenic
CTCAAAGAAAATAAGGTACG+AGG 0.632554 1_2:-75431707 Msa0092710:CDS
AACGGTAGATGGAGGCAGAG+AGG 0.643178 1_2:-75431773 Msa0092710:CDS
ACAGAGAAAAGCGAAGAACA+AGG 0.643427 1_2:-75431735 Msa0092710:CDS
AGGCAAGAACACCAAGACAG+GGG 0.648532 1_2:-75433356 Msa0092710:CDS
GAAGTGGAAGTGTAGTGGAA+AGG 0.652932 1_2:-75432875 Msa0092710:CDS
AAGGCAAGAACACCAAGACA+GGG 0.653824 1_2:-75433357 Msa0092710:CDS
ATATGGATGTCATCCAGTAA+CGG 0.662808 1_2:-75431791 Msa0092710:CDS
AACTGAAGGAGGACTAGGAG+CGG 0.667542 1_2:-75433133 Msa0092710:CDS
CATCCAGTAACGGTAGATGG+AGG 0.676181 1_2:-75431781 Msa0092710:CDS
CCTCCAGCAGCGAACCAGCG+AGG 0.699815 1_2:-75433314 Msa0092710:CDS
GCATAACAAAGAGAGCACGT+TGG 0.777160 1_2:-75433548 Msa0092710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAAATAATGATTATAATA+AGG - chr1_2:75432497-75432516 Msa0092710:intron 10.0%
!! GAAAATAATGATTATAATAA+GGG - chr1_2:75432498-75432517 Msa0092710:intron 10.0%
!! AAAATAATGATTATAATAAG+GGG - chr1_2:75432499-75432518 Msa0092710:intron 10.0%
!! AAAATATCTAAATGTATATT+TGG + chr1_2:75432786-75432805 None:intergenic 10.0%
!! TGAAAATAATGATTATAATA+AGG - chr1_2:75432497-75432516 Msa0092710:intron 10.0%
!! GAAAATAATGATTATAATAA+GGG - chr1_2:75432498-75432517 Msa0092710:intron 10.0%
!! AAAATAATGATTATAATAAG+GGG - chr1_2:75432499-75432518 Msa0092710:intron 10.0%
!! AAAATATCTAAATGTATATT+TGG + chr1_2:75432786-75432805 None:intergenic 10.0%
!!! TATATCTTAATTTTTCTTCA+TGG - chr1_2:75432656-75432675 Msa0092710:CDS 15.0%
!!! TCTTTCTATCAAATTTTATT+TGG - chr1_2:75432980-75432999 Msa0092710:CDS 15.0%
!! AATACTAACAAAAAAGATTA+GGG + chr1_2:75433646-75433665 None:intergenic 15.0%
!! AAATACTAACAAAAAAGATT+AGG + chr1_2:75433647-75433666 None:intergenic 15.0%
!!! ATTTGCTAAAAGTAATAATT+TGG - chr1_2:75433663-75433682 Msa0092710:five_prime_UTR 15.0%
!!! AACTTTTATATATACAAAGT+GGG + chr1_2:75433725-75433744 None:intergenic 15.0%
!!! AAACTTTTATATATACAAAG+TGG + chr1_2:75433726-75433745 None:intergenic 15.0%
!!! TATATCTTAATTTTTCTTCA+TGG - chr1_2:75432656-75432675 Msa0092710:CDS 15.0%
!!! TCTTTCTATCAAATTTTATT+TGG - chr1_2:75432980-75432999 Msa0092710:CDS 15.0%
!! AATACTAACAAAAAAGATTA+GGG + chr1_2:75433646-75433665 None:intergenic 15.0%
!! AAATACTAACAAAAAAGATT+AGG + chr1_2:75433647-75433666 None:intergenic 15.0%
!!! ATTTGCTAAAAGTAATAATT+TGG - chr1_2:75433663-75433682 Msa0092710:five_prime_UTR 15.0%
!!! AACTTTTATATATACAAAGT+GGG + chr1_2:75433725-75433744 None:intergenic 15.0%
!!! AAACTTTTATATATACAAAG+TGG + chr1_2:75433726-75433745 None:intergenic 15.0%
!!! AAGGGAATACAATTATTTTA+GGG + chr1_2:75431455-75431474 None:intergenic 20.0%
!!! TGAACTTTGAAATATGAATT+TGG + chr1_2:75431516-75431535 None:intergenic 20.0%
!! TAGTGATAATAATTATGAGA+TGG - chr1_2:75432158-75432177 Msa0092710:intron 20.0%
!! TTTACTGTTAGATTAATCAT+TGG - chr1_2:75432948-75432967 Msa0092710:CDS 20.0%
!! ATTTGATAGAAAGAAAAAAG+TGG + chr1_2:75432974-75432993 None:intergenic 20.0%
!! ATACTAACAAAAAAGATTAG+GGG + chr1_2:75433645-75433664 None:intergenic 20.0%
!!! ATATAAAAGTTTTGTGCAAT+TGG - chr1_2:75433734-75433753 Msa0092710:five_prime_UTR 20.0%
!!! AAGGGAATACAATTATTTTA+GGG + chr1_2:75431455-75431474 None:intergenic 20.0%
!!! TGAACTTTGAAATATGAATT+TGG + chr1_2:75431516-75431535 None:intergenic 20.0%
!! TAGTGATAATAATTATGAGA+TGG - chr1_2:75432158-75432177 Msa0092710:intron 20.0%
!! TTTACTGTTAGATTAATCAT+TGG - chr1_2:75432948-75432967 Msa0092710:CDS 20.0%
!! ATTTGATAGAAAGAAAAAAG+TGG + chr1_2:75432974-75432993 None:intergenic 20.0%
!! ATACTAACAAAAAAGATTAG+GGG + chr1_2:75433645-75433664 None:intergenic 20.0%
!!! ATATAAAAGTTTTGTGCAAT+TGG - chr1_2:75433734-75433753 Msa0092710:five_prime_UTR 20.0%
!!! AATACAATTATTTTAGGGAG+AGG + chr1_2:75431450-75431469 None:intergenic 25.0%
!! GAAGGGAATACAATTATTTT+AGG + chr1_2:75431456-75431475 None:intergenic 25.0%
! ATATTATTATTATTCCTCGC+TGG + chr1_2:75431904-75431923 None:intergenic 25.0%
! GATTAGAAAATGAGTGTATA+GGG - chr1_2:75432259-75432278 Msa0092710:intron 25.0%
! ATAAATTATACCATGCAATC+AGG + chr1_2:75432639-75432658 None:intergenic 25.0%
! GATACCAATCATTAACTAAA+GGG + chr1_2:75432707-75432726 None:intergenic 25.0%
! TGATACCAATCATTAACTAA+AGG + chr1_2:75432708-75432727 None:intergenic 25.0%
! AAAATAAGCTGAGACTATAA+AGG - chr1_2:75433288-75433307 Msa0092710:CDS 25.0%
!! ATTATTTATCAGGGAACTTT+TGG - chr1_2:75433351-75433370 Msa0092710:CDS 25.0%
!!! TATTTTAGCAAAGGAAATGT+TGG + chr1_2:75433591-75433610 None:intergenic 25.0%
!!! GCTCTTATTTATTTTAGCAA+AGG + chr1_2:75433600-75433619 None:intergenic 25.0%
!!! AATACAATTATTTTAGGGAG+AGG + chr1_2:75431450-75431469 None:intergenic 25.0%
!! GAAGGGAATACAATTATTTT+AGG + chr1_2:75431456-75431475 None:intergenic 25.0%
! ATATTATTATTATTCCTCGC+TGG + chr1_2:75431904-75431923 None:intergenic 25.0%
! GATTAGAAAATGAGTGTATA+GGG - chr1_2:75432259-75432278 Msa0092710:intron 25.0%
! ATAAATTATACCATGCAATC+AGG + chr1_2:75432639-75432658 None:intergenic 25.0%
! GATACCAATCATTAACTAAA+GGG + chr1_2:75432707-75432726 None:intergenic 25.0%
! TGATACCAATCATTAACTAA+AGG + chr1_2:75432708-75432727 None:intergenic 25.0%
! AAAATAAGCTGAGACTATAA+AGG - chr1_2:75433288-75433307 Msa0092710:CDS 25.0%
!! ATTATTTATCAGGGAACTTT+TGG - chr1_2:75433351-75433370 Msa0092710:CDS 25.0%
!!! TATTTTAGCAAAGGAAATGT+TGG + chr1_2:75433591-75433610 None:intergenic 25.0%
!!! GCTCTTATTTATTTTAGCAA+AGG + chr1_2:75433600-75433619 None:intergenic 25.0%
!!! TTATTTTAGGGAGAGGAAAA+GGG + chr1_2:75431443-75431462 None:intergenic 30.0%
!!! ATTATTTTAGGGAGAGGAAA+AGG + chr1_2:75431444-75431463 None:intergenic 30.0%
TTGTTAACACCTGACAAATT+AGG + chr1_2:75431480-75431499 None:intergenic 30.0%
!!! TTGAAGCTATACGTGTTTTT+TGG + chr1_2:75431541-75431560 None:intergenic 30.0%
GAAGAATTCATCACCATTAA+TGG + chr1_2:75431794-75431813 None:intergenic 30.0%
CTCTCATTGTATTTAACATC+AGG + chr1_2:75432117-75432136 None:intergenic 30.0%
GGATTAGAAAATGAGTGTAT+AGG - chr1_2:75432258-75432277 Msa0092710:intron 30.0%
ATTGATTGATACAAAGCATG+AGG - chr1_2:75432296-75432315 Msa0092710:intron 30.0%
CAATCCCTTTAGTTAATGAT+TGG - chr1_2:75432700-75432719 Msa0092710:CDS 30.0%
!! TGTTCAATTGATTCTAGCTT+AGG - chr1_2:75433205-75433224 Msa0092710:CDS 30.0%
GGTTGTTCTCAAAGAAAATA+AGG - chr1_2:75433487-75433506 Msa0092710:CDS 30.0%
TGGTTTGAGTGAAACTTTAT+TGG - chr1_2:75433754-75433773 Msa0092710:five_prime_UTR 30.0%
!!! TTATTTTAGGGAGAGGAAAA+GGG + chr1_2:75431443-75431462 None:intergenic 30.0%
!!! ATTATTTTAGGGAGAGGAAA+AGG + chr1_2:75431444-75431463 None:intergenic 30.0%
TTGTTAACACCTGACAAATT+AGG + chr1_2:75431480-75431499 None:intergenic 30.0%
!!! TTGAAGCTATACGTGTTTTT+TGG + chr1_2:75431541-75431560 None:intergenic 30.0%
GAAGAATTCATCACCATTAA+TGG + chr1_2:75431794-75431813 None:intergenic 30.0%
CTCTCATTGTATTTAACATC+AGG + chr1_2:75432117-75432136 None:intergenic 30.0%
GGATTAGAAAATGAGTGTAT+AGG - chr1_2:75432258-75432277 Msa0092710:intron 30.0%
ATTGATTGATACAAAGCATG+AGG - chr1_2:75432296-75432315 Msa0092710:intron 30.0%
CAATCCCTTTAGTTAATGAT+TGG - chr1_2:75432700-75432719 Msa0092710:CDS 30.0%
!! TGTTCAATTGATTCTAGCTT+AGG - chr1_2:75433205-75433224 Msa0092710:CDS 30.0%
GGTTGTTCTCAAAGAAAATA+AGG - chr1_2:75433487-75433506 Msa0092710:CDS 30.0%
TGGTTTGAGTGAAACTTTAT+TGG - chr1_2:75433754-75433773 Msa0092710:five_prime_UTR 30.0%
GGTGATGAATTCTTCAATTG+TGG - chr1_2:75431799-75431818 Msa0092710:CDS 35.0%
! TTCAATTGTGGTCCTTTTTC+TGG - chr1_2:75431811-75431830 Msa0092710:CDS 35.0%
ACTTCATCGAAACCTAAATC+CGG + chr1_2:75431943-75431962 None:intergenic 35.0%
GTACATAATTCAGCAACAGA+AGG + chr1_2:75432027-75432046 None:intergenic 35.0%
TCGGCTAATTCAATATCAGA+TGG + chr1_2:75432204-75432223 None:intergenic 35.0%
AGAAAATGAGTGTATAGGGA+TGG - chr1_2:75432263-75432282 Msa0092710:intron 35.0%
AGAGAGCTATGAAATTGTTG+AGG - chr1_2:75432365-75432384 Msa0092710:intron 35.0%
GAGAGCTATGAAATTGTTGA+GGG - chr1_2:75432366-75432385 Msa0092710:intron 35.0%
TGTTGAGGGAGATAATATGA+TGG - chr1_2:75432380-75432399 Msa0092710:intron 35.0%
! GGAGATAATATGATGGAGAT+TGG - chr1_2:75432387-75432406 Msa0092710:intron 35.0%
TTCTCATGAAACACTTGAAG+AGG - chr1_2:75432449-75432468 Msa0092710:intron 35.0%
ATGATGCAGTAATCATTGCA+TGG - chr1_2:75432550-75432569 Msa0092710:intron 35.0%
TGATGCAGTAATCATTGCAT+GGG - chr1_2:75432551-75432570 Msa0092710:intron 35.0%
TAATGGTGACAAGCCAAATT+TGG - chr1_2:75432596-75432615 Msa0092710:CDS 35.0%
TTCTCATCAGCATCCAAATT+TGG + chr1_2:75432612-75432631 None:intergenic 35.0%
CATGAGTGTGTCAAAAATCA+CGG + chr1_2:75432757-75432776 None:intergenic 35.0%
ACAGTAAAAAAGTGAACAGC+AGG + chr1_2:75432936-75432955 None:intergenic 35.0%
TAGGATTTGTAGCTTCTTGT+TGG - chr1_2:75433224-75433243 Msa0092710:CDS 35.0%
! TTGCTGAACTTTTAGTGCTT+TGG - chr1_2:75433255-75433274 Msa0092710:CDS 35.0%
!! TTATCAGGGAACTTTTGGAA+CGG - chr1_2:75433356-75433375 Msa0092710:CDS 35.0%
CATTATGCTTATGGTGAGTT+TGG - chr1_2:75433384-75433403 Msa0092710:CDS 35.0%
ATATGGATGTCATCCAGTAA+CGG - chr1_2:75433410-75433429 Msa0092710:CDS 35.0%
CTCAAAGAAAATAAGGTACG+AGG - chr1_2:75433494-75433513 Msa0092710:CDS 35.0%
AGAAAATAAGGTACGAGGTT+AGG - chr1_2:75433499-75433518 Msa0092710:CDS 35.0%
AGAAGAGACCAAGAATGAAA+GGG - chr1_2:75433535-75433554 Msa0092710:CDS 35.0%
ACAAATCTCCCTTTCATTCT+TGG + chr1_2:75433546-75433565 None:intergenic 35.0%
GGTGATGAATTCTTCAATTG+TGG - chr1_2:75431799-75431818 Msa0092710:CDS 35.0%
! TTCAATTGTGGTCCTTTTTC+TGG - chr1_2:75431811-75431830 Msa0092710:CDS 35.0%
ACTTCATCGAAACCTAAATC+CGG + chr1_2:75431943-75431962 None:intergenic 35.0%
GTACATAATTCAGCAACAGA+AGG + chr1_2:75432027-75432046 None:intergenic 35.0%
TCGGCTAATTCAATATCAGA+TGG + chr1_2:75432204-75432223 None:intergenic 35.0%
AGAAAATGAGTGTATAGGGA+TGG - chr1_2:75432263-75432282 Msa0092710:intron 35.0%
AGAGAGCTATGAAATTGTTG+AGG - chr1_2:75432365-75432384 Msa0092710:intron 35.0%
GAGAGCTATGAAATTGTTGA+GGG - chr1_2:75432366-75432385 Msa0092710:intron 35.0%
TGTTGAGGGAGATAATATGA+TGG - chr1_2:75432380-75432399 Msa0092710:intron 35.0%
! GGAGATAATATGATGGAGAT+TGG - chr1_2:75432387-75432406 Msa0092710:intron 35.0%
TTCTCATGAAACACTTGAAG+AGG - chr1_2:75432449-75432468 Msa0092710:intron 35.0%
ATGATGCAGTAATCATTGCA+TGG - chr1_2:75432550-75432569 Msa0092710:intron 35.0%
TGATGCAGTAATCATTGCAT+GGG - chr1_2:75432551-75432570 Msa0092710:intron 35.0%
TAATGGTGACAAGCCAAATT+TGG - chr1_2:75432596-75432615 Msa0092710:CDS 35.0%
TTCTCATCAGCATCCAAATT+TGG + chr1_2:75432612-75432631 None:intergenic 35.0%
CATGAGTGTGTCAAAAATCA+CGG + chr1_2:75432757-75432776 None:intergenic 35.0%
ACAGTAAAAAAGTGAACAGC+AGG + chr1_2:75432936-75432955 None:intergenic 35.0%
TAGGATTTGTAGCTTCTTGT+TGG - chr1_2:75433224-75433243 Msa0092710:CDS 35.0%
! TTGCTGAACTTTTAGTGCTT+TGG - chr1_2:75433255-75433274 Msa0092710:CDS 35.0%
!! TTATCAGGGAACTTTTGGAA+CGG - chr1_2:75433356-75433375 Msa0092710:CDS 35.0%
CATTATGCTTATGGTGAGTT+TGG - chr1_2:75433384-75433403 Msa0092710:CDS 35.0%
ATATGGATGTCATCCAGTAA+CGG - chr1_2:75433410-75433429 Msa0092710:CDS 35.0%
CTCAAAGAAAATAAGGTACG+AGG - chr1_2:75433494-75433513 Msa0092710:CDS 35.0%
AGAAAATAAGGTACGAGGTT+AGG - chr1_2:75433499-75433518 Msa0092710:CDS 35.0%
AGAAGAGACCAAGAATGAAA+GGG - chr1_2:75433535-75433554 Msa0092710:CDS 35.0%
ACAAATCTCCCTTTCATTCT+TGG + chr1_2:75433546-75433565 None:intergenic 35.0%
! TTCCCTTCACCTAATTTGTC+AGG - chr1_2:75431468-75431487 Msa0092710:three_prime_UTR 40.0%
CACCTGACAAATTAGGTGAA+GGG + chr1_2:75431473-75431492 None:intergenic 40.0%
ACACCTGACAAATTAGGTGA+AGG + chr1_2:75431474-75431493 None:intergenic 40.0%
AAAAACGTAGCAAACGCTGT+TGG - chr1_2:75431601-75431620 Msa0092710:exon 40.0%
TTCTTGGTGAAGCCAGAAAA+AGG + chr1_2:75431826-75431845 None:intergenic 40.0%
!!! TTTTTCTGGCTTCACCAAGA+AGG - chr1_2:75431825-75431844 Msa0092710:CDS 40.0%
AAATCCGGCACAAGATGAAA+CGG + chr1_2:75431928-75431947 None:intergenic 40.0%
TTTCATCTTGTGCCGGATTT+AGG - chr1_2:75431928-75431947 Msa0092710:intron 40.0%
ATGAAGCGCAACTTCTTTAC+AGG - chr1_2:75431986-75432005 Msa0092710:intron 40.0%
TGAAGCGCAACTTCTTTACA+GGG - chr1_2:75431987-75432006 Msa0092710:intron 40.0%
GCAACAGAAGGATCGAAAAT+TGG + chr1_2:75432015-75432034 None:intergenic 40.0%
CTCAACATCAGCTGCAAATT+CGG + chr1_2:75432223-75432242 None:intergenic 40.0%
AGCTGATGTTGAGAGCTTAT+TGG - chr1_2:75432230-75432249 Msa0092710:intron 40.0%
GCTGATGTTGAGAGCTTATT+GGG - chr1_2:75432231-75432250 Msa0092710:intron 40.0%
ATGTTGAGAGCTTATTGGGT+AGG - chr1_2:75432235-75432254 Msa0092710:intron 40.0%
TGTTGAGAGCTTATTGGGTA+GGG - chr1_2:75432236-75432255 Msa0092710:intron 40.0%
TGTATAGGGATGGAAGAGTT+GGG - chr1_2:75432273-75432292 Msa0092710:intron 40.0%
TGAAACACTTGAAGAGGTGA+AGG - chr1_2:75432455-75432474 Msa0092710:intron 40.0%
ATTTGGATGCTGATGAGAAC+TGG - chr1_2:75432613-75432632 Msa0092710:CDS 40.0%
! CGTGATTTTTGACACACTCA+TGG - chr1_2:75432755-75432774 Msa0092710:CDS 40.0%
CTTTACAACACTTGCACACA+CGG - chr1_2:75432887-75432906 Msa0092710:CDS 40.0%
ACGGAGGTTCATTATGCTTA+TGG - chr1_2:75433375-75433394 Msa0092710:CDS 40.0%
TATGCTTATGGTGAGTTTGG+TGG - chr1_2:75433387-75433406 Msa0092710:CDS 40.0%
! TATGGTGAGTTTGGTGGATA+TGG - chr1_2:75433393-75433412 Msa0092710:CDS 40.0%
ACAGAGAAAAGCGAAGAACA+AGG - chr1_2:75433466-75433485 Msa0092710:CDS 40.0%
GAGAAGAGACCAAGAATGAA+AGG - chr1_2:75433534-75433553 Msa0092710:CDS 40.0%
TGAAAGGGAGATTTGTGAAG+AGG - chr1_2:75433550-75433569 Msa0092710:CDS 40.0%
GAAAGGGAGATTTGTGAAGA+GGG - chr1_2:75433551-75433570 Msa0092710:CDS 40.0%
AGGAAATGTTGGAACTGCAA+AGG + chr1_2:75433580-75433599 None:intergenic 40.0%
! TTCCCTTCACCTAATTTGTC+AGG - chr1_2:75431468-75431487 Msa0092710:three_prime_UTR 40.0%
CACCTGACAAATTAGGTGAA+GGG + chr1_2:75431473-75431492 None:intergenic 40.0%
ACACCTGACAAATTAGGTGA+AGG + chr1_2:75431474-75431493 None:intergenic 40.0%
AAAAACGTAGCAAACGCTGT+TGG - chr1_2:75431601-75431620 Msa0092710:exon 40.0%
TTCTTGGTGAAGCCAGAAAA+AGG + chr1_2:75431826-75431845 None:intergenic 40.0%
!!! TTTTTCTGGCTTCACCAAGA+AGG - chr1_2:75431825-75431844 Msa0092710:CDS 40.0%
AAATCCGGCACAAGATGAAA+CGG + chr1_2:75431928-75431947 None:intergenic 40.0%
TTTCATCTTGTGCCGGATTT+AGG - chr1_2:75431928-75431947 Msa0092710:intron 40.0%
ATGAAGCGCAACTTCTTTAC+AGG - chr1_2:75431986-75432005 Msa0092710:intron 40.0%
TGAAGCGCAACTTCTTTACA+GGG - chr1_2:75431987-75432006 Msa0092710:intron 40.0%
GCAACAGAAGGATCGAAAAT+TGG + chr1_2:75432015-75432034 None:intergenic 40.0%
CTCAACATCAGCTGCAAATT+CGG + chr1_2:75432223-75432242 None:intergenic 40.0%
AGCTGATGTTGAGAGCTTAT+TGG - chr1_2:75432230-75432249 Msa0092710:intron 40.0%
GCTGATGTTGAGAGCTTATT+GGG - chr1_2:75432231-75432250 Msa0092710:intron 40.0%
ATGTTGAGAGCTTATTGGGT+AGG - chr1_2:75432235-75432254 Msa0092710:intron 40.0%
TGTTGAGAGCTTATTGGGTA+GGG - chr1_2:75432236-75432255 Msa0092710:intron 40.0%
TGTATAGGGATGGAAGAGTT+GGG - chr1_2:75432273-75432292 Msa0092710:intron 40.0%
TGAAACACTTGAAGAGGTGA+AGG - chr1_2:75432455-75432474 Msa0092710:intron 40.0%
ATTTGGATGCTGATGAGAAC+TGG - chr1_2:75432613-75432632 Msa0092710:CDS 40.0%
! CGTGATTTTTGACACACTCA+TGG - chr1_2:75432755-75432774 Msa0092710:CDS 40.0%
CTTTACAACACTTGCACACA+CGG - chr1_2:75432887-75432906 Msa0092710:CDS 40.0%
ACGGAGGTTCATTATGCTTA+TGG - chr1_2:75433375-75433394 Msa0092710:CDS 40.0%
TATGCTTATGGTGAGTTTGG+TGG - chr1_2:75433387-75433406 Msa0092710:CDS 40.0%
! TATGGTGAGTTTGGTGGATA+TGG - chr1_2:75433393-75433412 Msa0092710:CDS 40.0%
ACAGAGAAAAGCGAAGAACA+AGG - chr1_2:75433466-75433485 Msa0092710:CDS 40.0%
GAGAAGAGACCAAGAATGAA+AGG - chr1_2:75433534-75433553 Msa0092710:CDS 40.0%
TGAAAGGGAGATTTGTGAAG+AGG - chr1_2:75433550-75433569 Msa0092710:CDS 40.0%
GAAAGGGAGATTTGTGAAGA+GGG - chr1_2:75433551-75433570 Msa0092710:CDS 40.0%
AGGAAATGTTGGAACTGCAA+AGG + chr1_2:75433580-75433599 None:intergenic 40.0%
TAGGGAGAGGAAAAGGGAAA+AGG + chr1_2:75431437-75431456 None:intergenic 45.0%
TGTTGGAGGCAAAACTGCTA+GGG - chr1_2:75431618-75431637 Msa0092710:CDS 45.0%
! GCATAACAAAGAGAGCACGT+TGG - chr1_2:75431653-75431672 Msa0092710:CDS 45.0%
GCGTCGTACAAGTCCATTAA+TGG - chr1_2:75431778-75431797 Msa0092710:CDS 45.0%
!! TCTTGGTGTTCTTGCCTTCT+TGG + chr1_2:75431842-75431861 None:intergenic 45.0%
AAGGCAAGAACACCAAGACA+GGG - chr1_2:75431844-75431863 Msa0092710:intron 45.0%
GATTTGTGTTTCCCCTGTCT+TGG + chr1_2:75431859-75431878 None:intergenic 45.0%
TATCCCGTTTCATCTTGTGC+CGG - chr1_2:75431921-75431940 Msa0092710:intron 45.0%
AATCCGGCACAAGATGAAAC+GGG + chr1_2:75431927-75431946 None:intergenic 45.0%
TGTACTAGTCCTCCTTCAGT+TGG - chr1_2:75432042-75432061 Msa0092710:intron 45.0%
TCAGTTGAACCAACTGAAGG+AGG + chr1_2:75432054-75432073 None:intergenic 45.0%
CCTTCAGTTGAACCAACTGA+AGG + chr1_2:75432057-75432076 None:intergenic 45.0%
! CCTTCAGTTGGTTCAACTGA+AGG - chr1_2:75432054-75432073 Msa0092710:intron 45.0%
! TCAGTTGGTTCAACTGAAGG+AGG - chr1_2:75432057-75432076 Msa0092710:intron 45.0%
GTTGAGAGCTTATTGGGTAG+GGG - chr1_2:75432237-75432256 Msa0092710:intron 45.0%
GTGTATAGGGATGGAAGAGT+TGG - chr1_2:75432272-75432291 Msa0092710:intron 45.0%
! AGTGAGAAGTGGAAGTGTAG+TGG - chr1_2:75432321-75432340 Msa0092710:intron 45.0%
! GAAGTGGAAGTGTAGTGGAA+AGG - chr1_2:75432326-75432345 Msa0092710:intron 45.0%
! GAAGTGTAGTGGAAAGGTGA+AGG - chr1_2:75432332-75432351 Msa0092710:intron 45.0%
AGTGGAAAGGTGAAGGAAGA+AGG - chr1_2:75432339-75432358 Msa0092710:intron 45.0%
! CATTAGTCCAGGGACACTTT+TGG + chr1_2:75432581-75432600 None:intergenic 45.0%
!! CAAAAGTGTCCCTGGACTAA+TGG - chr1_2:75432579-75432598 Msa0092710:CDS 45.0%
GCAGGTCTAACACAAGTGAA+TGG + chr1_2:75432918-75432937 None:intergenic 45.0%
TGTCATCCAGTAACGGTAGA+TGG - chr1_2:75433417-75433436 Msa0092710:CDS 45.0%
TAGGGAGAGGAAAAGGGAAA+AGG + chr1_2:75431437-75431456 None:intergenic 45.0%
TGTTGGAGGCAAAACTGCTA+GGG - chr1_2:75431618-75431637 Msa0092710:CDS 45.0%
! GCATAACAAAGAGAGCACGT+TGG - chr1_2:75431653-75431672 Msa0092710:CDS 45.0%
GCGTCGTACAAGTCCATTAA+TGG - chr1_2:75431778-75431797 Msa0092710:CDS 45.0%
!! TCTTGGTGTTCTTGCCTTCT+TGG + chr1_2:75431842-75431861 None:intergenic 45.0%
AAGGCAAGAACACCAAGACA+GGG - chr1_2:75431844-75431863 Msa0092710:intron 45.0%
GATTTGTGTTTCCCCTGTCT+TGG + chr1_2:75431859-75431878 None:intergenic 45.0%
TATCCCGTTTCATCTTGTGC+CGG - chr1_2:75431921-75431940 Msa0092710:intron 45.0%
AATCCGGCACAAGATGAAAC+GGG + chr1_2:75431927-75431946 None:intergenic 45.0%
TGTACTAGTCCTCCTTCAGT+TGG - chr1_2:75432042-75432061 Msa0092710:intron 45.0%
TCAGTTGAACCAACTGAAGG+AGG + chr1_2:75432054-75432073 None:intergenic 45.0%
CCTTCAGTTGAACCAACTGA+AGG + chr1_2:75432057-75432076 None:intergenic 45.0%
! CCTTCAGTTGGTTCAACTGA+AGG - chr1_2:75432054-75432073 Msa0092710:intron 45.0%
! TCAGTTGGTTCAACTGAAGG+AGG - chr1_2:75432057-75432076 Msa0092710:intron 45.0%
GTTGAGAGCTTATTGGGTAG+GGG - chr1_2:75432237-75432256 Msa0092710:intron 45.0%
GTGTATAGGGATGGAAGAGT+TGG - chr1_2:75432272-75432291 Msa0092710:intron 45.0%
! AGTGAGAAGTGGAAGTGTAG+TGG - chr1_2:75432321-75432340 Msa0092710:intron 45.0%
! GAAGTGGAAGTGTAGTGGAA+AGG - chr1_2:75432326-75432345 Msa0092710:intron 45.0%
! GAAGTGTAGTGGAAAGGTGA+AGG - chr1_2:75432332-75432351 Msa0092710:intron 45.0%
AGTGGAAAGGTGAAGGAAGA+AGG - chr1_2:75432339-75432358 Msa0092710:intron 45.0%
! CATTAGTCCAGGGACACTTT+TGG + chr1_2:75432581-75432600 None:intergenic 45.0%
!! CAAAAGTGTCCCTGGACTAA+TGG - chr1_2:75432579-75432598 Msa0092710:CDS 45.0%
GCAGGTCTAACACAAGTGAA+TGG + chr1_2:75432918-75432937 None:intergenic 45.0%
TGTCATCCAGTAACGGTAGA+TGG - chr1_2:75433417-75433436 Msa0092710:CDS 45.0%
!!! TTTTAATTTAATTATTTATC+AGG - chr1_2:75433341-75433360 Msa0092710:CDS 5.0%
!!! TTTAATTTAATTATTTATCA+GGG - chr1_2:75433342-75433361 Msa0092710:CDS 5.0%
!!! TTTTAATTTAATTATTTATC+AGG - chr1_2:75433341-75433360 Msa0092710:CDS 5.0%
!!! TTTAATTTAATTATTTATCA+GGG - chr1_2:75433342-75433361 Msa0092710:CDS 5.0%
AACGTAGCAAACGCTGTTGG+AGG - chr1_2:75431604-75431623 Msa0092710:exon 50.0%
CTGTTGGAGGCAAAACTGCT+AGG - chr1_2:75431617-75431636 Msa0092710:CDS 50.0%
GAAGGCAAGAACACCAAGAC+AGG - chr1_2:75431843-75431862 Msa0092710:intron 50.0%
AGGCAAGAACACCAAGACAG+GGG - chr1_2:75431845-75431864 Msa0092710:intron 50.0%
GGTTCAACTGAAGGAGGACT+AGG - chr1_2:75432063-75432082 Msa0092710:intron 50.0%
AACTGAAGGAGGACTAGGAG+CGG - chr1_2:75432068-75432087 Msa0092710:intron 50.0%
AGCATGAGGAGAGTGAGAAG+TGG - chr1_2:75432310-75432329 Msa0092710:intron 50.0%
GAAGAGGTGAAGGAGAAGTG+TGG - chr1_2:75432465-75432484 Msa0092710:intron 50.0%
GGCTTGTCACCATTAGTCCA+GGG + chr1_2:75432591-75432610 None:intergenic 50.0%
! TGGCTTGTCACCATTAGTCC+AGG + chr1_2:75432592-75432611 None:intergenic 50.0%
! TGAGAACTGGCCTGATTGCA+TGG - chr1_2:75432626-75432645 Msa0092710:CDS 50.0%
!!! TCAGGGAACTTTTGGAACGG+AGG - chr1_2:75433359-75433378 Msa0092710:CDS 50.0%
CATCCAGTAACGGTAGATGG+AGG - chr1_2:75433420-75433439 Msa0092710:CDS 50.0%
AACGTAGCAAACGCTGTTGG+AGG - chr1_2:75431604-75431623 Msa0092710:exon 50.0%
CTGTTGGAGGCAAAACTGCT+AGG - chr1_2:75431617-75431636 Msa0092710:CDS 50.0%
GAAGGCAAGAACACCAAGAC+AGG - chr1_2:75431843-75431862 Msa0092710:intron 50.0%
AGGCAAGAACACCAAGACAG+GGG - chr1_2:75431845-75431864 Msa0092710:intron 50.0%
GGTTCAACTGAAGGAGGACT+AGG - chr1_2:75432063-75432082 Msa0092710:intron 50.0%
AACTGAAGGAGGACTAGGAG+CGG - chr1_2:75432068-75432087 Msa0092710:intron 50.0%
AGCATGAGGAGAGTGAGAAG+TGG - chr1_2:75432310-75432329 Msa0092710:intron 50.0%
GAAGAGGTGAAGGAGAAGTG+TGG - chr1_2:75432465-75432484 Msa0092710:intron 50.0%
GGCTTGTCACCATTAGTCCA+GGG + chr1_2:75432591-75432610 None:intergenic 50.0%
! TGGCTTGTCACCATTAGTCC+AGG + chr1_2:75432592-75432611 None:intergenic 50.0%
! TGAGAACTGGCCTGATTGCA+TGG - chr1_2:75432626-75432645 Msa0092710:CDS 50.0%
!!! TCAGGGAACTTTTGGAACGG+AGG - chr1_2:75433359-75433378 Msa0092710:CDS 50.0%
CATCCAGTAACGGTAGATGG+AGG - chr1_2:75433420-75433439 Msa0092710:CDS 50.0%
!! GGGATAGCCAAAAGTGTCCC+TGG - chr1_2:75432571-75432590 Msa0092710:intron 55.0%
CTGCCTCCATCTACCGTTAC+TGG + chr1_2:75433426-75433445 None:intergenic 55.0%
AACGGTAGATGGAGGCAGAG+AGG - chr1_2:75433428-75433447 Msa0092710:CDS 55.0%
TAGATGGAGGCAGAGAGGCA+AGG - chr1_2:75433433-75433452 Msa0092710:CDS 55.0%
AGATGGAGGCAGAGAGGCAA+GGG - chr1_2:75433434-75433453 Msa0092710:CDS 55.0%
GCAGAGAGGCAAGGGTTTCA+AGG - chr1_2:75433442-75433461 Msa0092710:CDS 55.0%
!! GGGATAGCCAAAAGTGTCCC+TGG - chr1_2:75432571-75432590 Msa0092710:intron 55.0%
CTGCCTCCATCTACCGTTAC+TGG + chr1_2:75433426-75433445 None:intergenic 55.0%
AACGGTAGATGGAGGCAGAG+AGG - chr1_2:75433428-75433447 Msa0092710:CDS 55.0%
TAGATGGAGGCAGAGAGGCA+AGG - chr1_2:75433433-75433452 Msa0092710:CDS 55.0%
AGATGGAGGCAGAGAGGCAA+GGG - chr1_2:75433434-75433453 Msa0092710:CDS 55.0%
GCAGAGAGGCAAGGGTTTCA+AGG - chr1_2:75433442-75433461 Msa0092710:CDS 55.0%
!! ATTCCTCGCTGGTTCGCTGC+TGG + chr1_2:75431893-75431912 None:intergenic 60.0%
!! ATTCCTCGCTGGTTCGCTGC+TGG + chr1_2:75431893-75431912 None:intergenic 60.0%
!! CCTCGCTGGTTCGCTGCTGG+AGG + chr1_2:75431890-75431909 None:intergenic 70.0%
CCTCCAGCAGCGAACCAGCG+AGG - chr1_2:75431887-75431906 Msa0092710:intron 70.0%
!! CCTCGCTGGTTCGCTGCTGG+AGG + chr1_2:75431890-75431909 None:intergenic 70.0%
CCTCCAGCAGCGAACCAGCG+AGG - chr1_2:75431887-75431906 Msa0092710:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 75431432 75433791 75431432 ID=Msa0092710;Name=Msa0092710
chr1_2 mRNA 75431432 75433791 75431432 ID=Msa0092710-mRNA-1;Parent=Msa0092710;Name=Msa0092710-mRNA-1;_AED=0.01;_eAED=0.01;_QI=154|1|1|1|1|1|2|180|436
chr1_2 exon 75431432 75431860 75431432 ID=Msa0092710-mRNA-1:exon:26552;Parent=Msa0092710-mRNA-1
chr1_2 exon 75432576 75433791 75432576 ID=Msa0092710-mRNA-1:exon:26551;Parent=Msa0092710-mRNA-1
chr1_2 five_prime_UTR 75433638 75433791 75433638 ID=Msa0092710-mRNA-1:five_prime_utr;Parent=Msa0092710-mRNA-1
chr1_2 CDS 75432576 75433637 75432576 ID=Msa0092710-mRNA-1:cds;Parent=Msa0092710-mRNA-1
chr1_2 CDS 75431612 75431860 75431612 ID=Msa0092710-mRNA-1:cds;Parent=Msa0092710-mRNA-1
chr1_2 three_prime_UTR 75431432 75431611 75431432 ID=Msa0092710-mRNA-1:three_prime_utr;Parent=Msa0092710-mRNA-1
Gene Sequence

>Msa0092710

ATGACTTGTTCTAGTAAAAACGTAGCAAACGCTGTTGGAGGCAAAACTGCTAGGGCTTGTGACAGTTGCATAACAAAGAGAGCACGTTGGTATTGTGCTGCTGATGATGCTTTTCTCTGTCAAGCTTGTGACTCTTCTGTTCATTCAGCTAATTCTTTAGCTCGAAGACATGAAAGAGTTCGTTTGAAAACAGCGTCGTACAAGTCCATTAATGGTGATGAATTCTTCAATTGTGGTCCTTTTTCTGGCTTCACCAAGAAGGCAAGAACACCAAGACAGGGGAAACACAAATCAAAATCATCCTCCAGCAGCGAACCAGCGAGGAATAATAATAATATCCCGTTTCATCTTGTGCCGGATTTAGGTTTCGATGAAGTTAATTCAAATTCACATGACGAAAATGAAGCGCAACTTCTTTACAGGGTACCAATTTTCGATCCTTCTGTTGCTGAATTATGTACTAGTCCTCCTTCAGTTGGTTCAACTGAAGGAGGACTAGGAGCGGTAGTTGTTGCTTCTGCTTTCGCTCCTGATGTTAAATACAATGAGAGTGAAAGCAGAGTTCAACTAGCTAGTGATAATAATTATGAGATGGAAAGCTTTCACGAGCTTCTTCCATCTGATATTGAATTAGCCGAATTTGCAGCTGATGTTGAGAGCTTATTGGGTAGGGGATTAGAAAATGAGTGTATAGGGATGGAAGAGTTGGGATTGATTGATACAAAGCATGAGGAGAGTGAGAAGTGGAAGTGTAGTGGAAAGGTGAAGGAAGAAGGTGAAGAGAGCTATGAAATTGTTGAGGGAGATAATATGATGGAGATTGGAAAAGAATCTTCATTTGAGTTGAATTTTGATTATGATGATTCTCATGAAACACTTGAAGAGGTGAAGGAGAAGTGTGGAGAACAAAATGAAAATAATGATTATAATAAGGGGAAAAGAAAAATATCTTTGCAGCTAGATTATGATGCAGTAATCATTGCATGGGATAGCCAAAAGTGTCCCTGGACTAATGGTGACAAGCCAAATTTGGATGCTGATGAGAACTGGCCTGATTGCATGGGAACTTTTGGAACGGAGGTTCATTATGCTTATGGTGAGTTTGGTGGATATGGATGTCATCCAGTAACGGTAGATGGAGGCAGAGAGGCAAGGGTTTCAAGGTACAGAGAAAAGCGAAGAACAAGGTTGTTCTCAAAGAAAATAAGGTACGAGGTTAGGAAATTGAATGCAGAGAAGAGACCAAGAATGAAAGGGAGATTTGTGAAGAGGGCTTCCTTTGCAGTTCCAACATTTCCTTTGCTAAAATAA

Protein sequence

>Msa0092710

MTCSSKNVANAVGGKTARACDSCITKRARWYCAADDAFLCQACDSSVHSANSLARRHERVRLKTASYKSINGDEFFNCGPFSGFTKKARTPRQGKHKSKSSSSSEPARNNNNIPFHLVPDLGFDEVNSNSHDENEAQLLYRVPIFDPSVAELCTSPPSVGSTEGGLGAVVVASAFAPDVKYNESESRVQLASDNNYEMESFHELLPSDIELAEFAADVESLLGRGLENECIGMEELGLIDTKHEESEKWKCSGKVKEEGEESYEIVEGDNMMEIGKESSFELNFDYDDSHETLEEVKEKCGEQNENNDYNKGKRKISLQLDYDAVIIAWDSQKCPWTNGDKPNLDADENWPDCMGTFGTEVHYAYGEFGGYGCHPVTVDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASFAVPTFPLLK*