Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264050 | XP_003597312.1 | 96.795 | 468 | 13 | 2 | 1 | 466 | 13 | 480 | 0.0 | 936 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264050 | sp|Q9SIB2|KCS12_ARATH | 66.300 | 454 | 148 | 3 | 7 | 456 | 19 | 471 | 0.0 | 636 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264050 | G7IUA7 | 96.795 | 468 | 13 | 2 | 1 | 466 | 13 | 480 | 0.0 | 936 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004350 | Msa0264050 | 0.817940 | 2.540126e-52 | -8.615850e-47 |
| Msa0006700 | Msa0264050 | 0.822665 | 2.097900e-53 | -8.615850e-47 |
| Msa0017120 | Msa0264050 | 0.804677 | 1.925509e-49 | -8.615850e-47 |
| Msa0020630 | Msa0264050 | 0.821382 | 4.160295e-53 | -8.615850e-47 |
| Msa0037820 | Msa0264050 | 0.816352 | 5.780639e-52 | -8.615850e-47 |
| Msa0043940 | Msa0264050 | 0.886835 | 2.420258e-72 | -8.615850e-47 |
| Msa0044710 | Msa0264050 | 0.800730 | 1.256381e-48 | -8.615850e-47 |
| Msa0047470 | Msa0264050 | 0.801563 | 8.487701e-49 | -8.615850e-47 |
| Msa0050720 | Msa0264050 | 0.834167 | 3.505573e-56 | -8.615850e-47 |
| Msa0050770 | Msa0264050 | 0.825357 | 4.900034e-54 | -8.615850e-47 |
| Msa0055280 | Msa0264050 | 0.848272 | 6.812513e-60 | -8.615850e-47 |
| Msa0079770 | Msa0264050 | 0.845802 | 3.234584e-59 | -8.615850e-47 |
| Msa0084680 | Msa0264050 | 0.821134 | 4.744592e-53 | -8.615850e-47 |
| Msa0092710 | Msa0264050 | 0.880712 | 4.378099e-70 | -8.615850e-47 |
| Msa0101060 | Msa0264050 | 0.838579 | 2.644696e-57 | -8.615850e-47 |
| Msa0105340 | Msa0264050 | 0.812104 | 5.013859e-51 | -8.615850e-47 |
| Msa0127440 | Msa0264050 | 0.835922 | 1.265464e-56 | -8.615850e-47 |
| Msa0147550 | Msa0264050 | 0.803297 | 3.727941e-49 | -8.615850e-47 |
| Msa0153430 | Msa0264050 | 0.807639 | 4.581412e-50 | -8.615850e-47 |
| Msa0159750 | Msa0264050 | 0.825784 | 3.879972e-54 | -8.615850e-47 |
| Msa0182640 | Msa0264050 | 0.878079 | 3.751686e-69 | -8.615850e-47 |
| Msa0183620 | Msa0264050 | 0.800071 | 1.711716e-48 | -8.615850e-47 |
| Msa0193760 | Msa0264050 | 0.824776 | 6.721061e-54 | -8.615850e-47 |
| Msa0208630 | Msa0264050 | 0.818503 | 1.894733e-52 | -8.615850e-47 |
| Msa0213080 | Msa0264050 | 0.828076 | 1.099067e-54 | -8.615850e-47 |
| Msa0216210 | Msa0264050 | 0.812484 | 4.142536e-51 | -8.615850e-47 |
| Msa0222660 | Msa0264050 | 0.965692 | 6.188276e-125 | -8.615850e-47 |
| Msa0235550 | Msa0264050 | 0.839063 | 1.981934e-57 | -8.615850e-47 |
| Msa0264050 | Msa0265820 | 0.802612 | 5.166009e-49 | -8.615850e-47 |
| Msa0264050 | Msa0274520 | 0.840693 | 7.455529e-58 | -8.615850e-47 |
| Msa0264050 | Msa0277530 | 0.807206 | 5.659288e-50 | -8.615850e-47 |
| Msa0264050 | Msa0280490 | 0.812433 | 4.250937e-51 | -8.615850e-47 |
| Msa0264050 | Msa0281940 | 0.811778 | 5.905986e-51 | -8.615850e-47 |
| Msa0264050 | Msa0282170 | 0.818006 | 2.455235e-52 | -8.615850e-47 |
| Msa0264050 | Msa0284870 | 0.811998 | 5.288922e-51 | -8.615850e-47 |
| Msa0264050 | Msa0296610 | 0.814271 | 1.677002e-51 | -8.615850e-47 |
| Msa0264050 | Msa0301980 | 0.923350 | 2.981791e-89 | -8.615850e-47 |
| Msa0264050 | Msa0318270 | 0.814393 | 1.576445e-51 | -8.615850e-47 |
| Msa0264050 | Msa0318310 | 0.809432 | 1.897978e-50 | -8.615850e-47 |
| Msa0264050 | Msa0334980 | 0.820493 | 6.663109e-53 | -8.615850e-47 |
| Msa0264050 | Msa0339310 | 0.972898 | 1.596290e-135 | -8.615850e-47 |
| Msa0264050 | Msa0354390 | 0.822525 | 2.261258e-53 | -8.615850e-47 |
| Msa0264050 | Msa0361250 | 0.829762 | 4.293526e-55 | -8.615850e-47 |
| Msa0264050 | Msa0361260 | 0.804696 | 1.908750e-49 | -8.615850e-47 |
| Msa0264050 | Msa0366870 | 0.806315 | 8.730742e-50 | -8.615850e-47 |
| Msa0264050 | Msa0371570 | 0.814680 | 1.362009e-51 | -8.615850e-47 |
| Msa0264050 | Msa0389060 | 0.800532 | 1.378809e-48 | -8.615850e-47 |
| Msa0264050 | Msa0401340 | 0.800889 | 1.166334e-48 | -8.615850e-47 |
| Msa0264050 | Msa0408630 | 0.812623 | 3.863256e-51 | -8.615850e-47 |
| Msa0264050 | Msa0411560 | 0.800643 | 1.309050e-48 | -8.615850e-47 |
| Msa0264050 | Msa0414780 | 0.837027 | 6.620533e-57 | -8.615850e-47 |
| Msa0264050 | Msa0419990 | 0.835339 | 1.777711e-56 | -8.615850e-47 |
| Msa0264050 | Msa0431520 | 0.841252 | 5.318667e-58 | -8.615850e-47 |
| Msa0264050 | Msa0431830 | 0.841953 | 3.475480e-58 | -8.615850e-47 |
| Msa0264050 | Msa0432720 | 0.814021 | 1.904648e-51 | -8.615850e-47 |
| Msa0264050 | Msa0448120 | 0.808532 | 2.957009e-50 | -8.615850e-47 |
| Msa0264050 | Msa0465930 | 0.816602 | 5.082795e-52 | -8.615850e-47 |
| Msa0264050 | Msa0465970 | 0.814125 | 1.806277e-51 | -8.615850e-47 |
| Msa0264050 | Msa0473530 | 0.816867 | 4.431188e-52 | -8.615850e-47 |
| Msa0264050 | Msa0484690 | 0.816229 | 6.158591e-52 | -8.615850e-47 |
| Msa0264050 | Msa0520220 | 0.824122 | 9.576170e-54 | -8.615850e-47 |
| Msa0264050 | Msa0530930 | 0.815564 | 8.666506e-52 | -8.615850e-47 |
| Msa0264050 | Msa0530950 | 0.803237 | 3.836266e-49 | -8.615850e-47 |
| Msa0264050 | Msa0532840 | 0.823425 | 1.394567e-53 | -8.615850e-47 |
| Msa0264050 | Msa0533010 | 0.827851 | 1.244824e-54 | -8.615850e-47 |
| Msa0264050 | Msa0555950 | 0.800952 | 1.132220e-48 | -8.615850e-47 |
| Msa0264050 | Msa0561510 | 0.803618 | 3.199248e-49 | -8.615850e-47 |
| Msa0264050 | Msa0568610 | 0.828027 | 1.129493e-54 | -8.615850e-47 |
| Msa0264050 | Msa0577230 | 0.818828 | 1.598964e-52 | -8.615850e-47 |
| Msa0264050 | Msa0578070 | -0.800074 | 1.709631e-48 | -8.615850e-47 |
| Msa0264050 | Msa0583790 | 0.809322 | 2.004171e-50 | -8.615850e-47 |
| Msa0264050 | Msa0587900 | 0.800771 | 1.232824e-48 | -8.615850e-47 |
| Msa0264050 | Msa0607200 | 0.805340 | 1.399582e-49 | -8.615850e-47 |
| Msa0264050 | Msa0618520 | 0.822553 | 2.227271e-53 | -8.615850e-47 |
| Msa0264050 | Msa0619330 | 0.814755 | 1.310671e-51 | -8.615850e-47 |
| Msa0264050 | Msa0620640 | 0.847677 | 9.942072e-60 | -8.615850e-47 |
| Msa0264050 | Msa0647000 | 0.803161 | 3.977616e-49 | -8.615850e-47 |
| Msa0264050 | Msa0651400 | 0.819200 | 1.315752e-52 | -8.615850e-47 |
| Msa0264050 | Msa0657670 | 0.805791 | 1.125490e-49 | -8.615850e-47 |
| Msa0264050 | Msa0665910 | -0.821929 | 3.108025e-53 | -8.615850e-47 |
| Msa0264050 | Msa0667970 | 0.822393 | 2.426178e-53 | -8.615850e-47 |
| Msa0264050 | Msa0677820 | 0.814688 | 1.356082e-51 | -8.615850e-47 |
| Msa0264050 | Msa0700070 | 0.802031 | 6.802274e-49 | -8.615850e-47 |
| Msa0264050 | Msa0704220 | 0.839824 | 1.257673e-57 | -8.615850e-47 |
| Msa0264050 | Msa0718470 | 0.816577 | 5.146825e-52 | -8.615850e-47 |
| Msa0264050 | Msa0719340 | 0.800115 | 1.676447e-48 | -8.615850e-47 |
| Msa0264050 | Msa0720270 | 0.833686 | 4.625492e-56 | -8.615850e-47 |
| Msa0264050 | Msa0724050 | 0.808154 | 3.559638e-50 | -8.615850e-47 |
| Msa0264050 | Msa0726610 | 0.807021 | 6.193947e-50 | -8.615850e-47 |
| Msa0264050 | Msa0729550 | 0.802391 | 5.736034e-49 | -8.615850e-47 |
| Msa0264050 | Msa0730180 | 0.808632 | 2.815005e-50 | -8.615850e-47 |
| Msa0264050 | Msa0731710 | 0.805725 | 1.162301e-49 | -8.615850e-47 |
| Msa0264050 | Msa0734660 | 0.857608 | 1.453593e-62 | -8.615850e-47 |
| Msa0264050 | Msa0738870 | 0.803586 | 3.248419e-49 | -8.615850e-47 |
| Msa0264050 | Msa0738880 | 0.821046 | 4.972771e-53 | -8.615850e-47 |
| Msa0264050 | Msa0750380 | 0.825875 | 3.692784e-54 | -8.615850e-47 |
| Msa0264050 | Msa0752580 | 0.833548 | 5.004999e-56 | -8.615850e-47 |
| Msa0264050 | Msa0754500 | 0.822748 | 2.006261e-53 | -8.615850e-47 |
| Msa0264050 | Msa0760890 | 0.863436 | 2.493356e-64 | -8.615850e-47 |
| Msa0264050 | Msa0763880 | 0.815907 | 7.266850e-52 | -8.615850e-47 |
| Msa0264050 | Msa0763910 | 0.809990 | 1.439484e-50 | -8.615850e-47 |
| Msa0264050 | Msa0769830 | 0.832747 | 7.922127e-56 | -8.615850e-47 |
| Msa0264050 | Msa0770430 | 0.810411 | 1.168267e-50 | -8.615850e-47 |
| Msa0264050 | Msa0772150 | 0.805846 | 1.095941e-49 | -8.615850e-47 |
| Msa0264050 | Msa0775260 | 0.813269 | 2.787847e-51 | -8.615850e-47 |
| Msa0264050 | Msa0776220 | 0.839592 | 1.444939e-57 | -8.615850e-47 |
| Msa0264050 | Msa0784640 | 0.817724 | 2.843288e-52 | -8.615850e-47 |
| Msa0264050 | Msa0801100 | 0.814387 | 1.581041e-51 | -8.615850e-47 |
| Msa0264050 | Msa0803130 | 0.810816 | 9.549500e-51 | -8.615850e-47 |
| Msa0264050 | Msa0811510 | 0.800654 | 1.302110e-48 | -8.615850e-47 |
| Msa0264050 | Msa0813670 | 0.839879 | 1.216747e-57 | -8.615850e-47 |
| Msa0264050 | Msa0819320 | 0.801802 | 7.583003e-49 | -8.615850e-47 |
| Msa0264050 | Msa0819360 | 0.817197 | 3.735328e-52 | -8.615850e-47 |
| Msa0264050 | Msa0819370 | 0.818915 | 1.527968e-52 | -8.615850e-47 |
| Msa0264050 | Msa0830720 | 0.823090 | 1.670187e-53 | -8.615850e-47 |
| Msa0264050 | Msa0830900 | 0.827492 | 1.518530e-54 | -8.615850e-47 |
| Msa0264050 | Msa0841490 | 0.808535 | 2.952393e-50 | -8.615850e-47 |
| Msa0264050 | Msa0848360 | 0.807432 | 5.069962e-50 | -8.615850e-47 |
| Msa0264050 | Msa0848380 | 0.818059 | 2.388322e-52 | -8.615850e-47 |
| Msa0264050 | Msa0848760 | 0.826048 | 3.359711e-54 | -8.615850e-47 |
| Msa0264050 | Msa0853170 | 0.817436 | 3.301199e-52 | -8.615850e-47 |
| Msa0264050 | Msa0854120 | 0.813719 | 2.219970e-51 | -8.615850e-47 |
| Msa0264050 | Msa0859560 | 0.800403 | 1.465081e-48 | -8.615850e-47 |
| Msa0264050 | Msa0872420 | 0.809494 | 1.840255e-50 | -8.615850e-47 |
| Msa0264050 | Msa0890250 | 0.800384 | 1.478253e-48 | -8.615850e-47 |
| Msa0264050 | Msa0903730 | 0.816800 | 4.588948e-52 | -8.615850e-47 |
| Msa0264050 | Msa0905260 | 0.810794 | 9.656075e-51 | -8.615850e-47 |
| Msa0264050 | Msa0909710 | 0.823898 | 1.080753e-53 | -8.615850e-47 |
| Msa0264050 | Msa0925160 | 0.801968 | 7.010960e-49 | -8.615850e-47 |
| Msa0264050 | Msa0934830 | 0.800012 | 1.759306e-48 | -8.615850e-47 |
| Msa0264050 | Msa0937240 | 0.832678 | 8.242029e-56 | -8.615850e-47 |
| Msa0264050 | Msa0937940 | 0.818767 | 1.650993e-52 | -8.615850e-47 |
| Msa0264050 | Msa0950620 | 0.808550 | 2.931028e-50 | -8.615850e-47 |
| Msa0264050 | Msa0955260 | 0.803614 | 3.205604e-49 | -8.615850e-47 |
| Msa0264050 | Msa0964680 | 0.804979 | 1.665473e-49 | -8.615850e-47 |
| Msa0264050 | Msa0971860 | 0.811528 | 6.692062e-51 | -8.615850e-47 |
| Msa0264050 | Msa0974530 | 0.818869 | 1.565009e-52 | -8.615850e-47 |
| Msa0264050 | Msa0974910 | 0.805161 | 1.525637e-49 | -8.615850e-47 |
| Msa0264050 | Msa0981740 | 0.807727 | 4.388247e-50 | -8.615850e-47 |
| Msa0264050 | Msa1004210 | 0.808130 | 3.602807e-50 | -8.615850e-47 |
| Msa0264050 | Msa1006860 | 0.815060 | 1.121820e-51 | -8.615850e-47 |
| Msa0264050 | Msa1026760 | 0.808627 | 2.822180e-50 | -8.615850e-47 |
| Msa0264050 | Msa1026790 | 0.804975 | 1.668983e-49 | -8.615850e-47 |
| Msa0264050 | Msa1030870 | 0.832747 | 7.921464e-56 | -8.615850e-47 |
| Msa0264050 | Msa1044040 | 0.806057 | 9.894401e-50 | -8.615850e-47 |
| Msa0264050 | Msa1046610 | 0.814759 | 1.308325e-51 | -8.615850e-47 |
| Msa0264050 | Msa1048330 | 0.802719 | 4.909535e-49 | -8.615850e-47 |
| Msa0264050 | Msa1053260 | 0.807491 | 4.925547e-50 | -8.615850e-47 |
| Msa0264050 | Msa1055360 | 0.806907 | 6.547248e-50 | -8.615850e-47 |
| Msa0264050 | Msa1059420 | 0.807915 | 4.003669e-50 | -8.615850e-47 |
| Msa0264050 | Msa1063920 | 0.817063 | 4.003684e-52 | -8.615850e-47 |
| Msa0264050 | Msa1072350 | 0.802727 | 4.891030e-49 | -8.615850e-47 |
| Msa0264050 | Msa1080460 | 0.811457 | 6.936241e-51 | -8.615850e-47 |
| Msa0264050 | Msa1095480 | 0.838590 | 2.627260e-57 | -8.615850e-47 |
| Msa0264050 | Msa1100490 | 0.824581 | 7.468977e-54 | -8.615850e-47 |
| Msa0264050 | Msa1108140 | 0.810752 | 9.858138e-51 | -8.615850e-47 |
| Msa0264050 | Msa1135870 | 0.807609 | 4.650360e-50 | -8.615850e-47 |
| Msa0264050 | Msa1142500 | 0.813644 | 2.305447e-51 | -8.615850e-47 |
| Msa0264050 | Msa1157730 | 0.848940 | 4.448496e-60 | -8.615850e-47 |
| Msa0264050 | Msa1166970 | 0.800245 | 1.577407e-48 | -8.615850e-47 |
| Msa0264050 | Msa1178160 | 0.818063 | 2.383179e-52 | -8.615850e-47 |
| Msa0264050 | Msa1182830 | 0.810238 | 1.273134e-50 | -8.615850e-47 |
| Msa0264050 | Msa1184580 | 0.806791 | 6.927700e-50 | -8.615850e-47 |
| Msa0264050 | Msa1205010 | -0.805328 | 1.407974e-49 | -8.615850e-47 |
| Msa0264050 | Msa1206020 | 0.814930 | 1.198897e-51 | -8.615850e-47 |
| Msa0264050 | Msa1252070 | 0.815062 | 1.120528e-51 | -8.615850e-47 |
| Msa0264050 | Msa1292730 | 0.827134 | 1.850066e-54 | -8.615850e-47 |
| Msa0264050 | Msa1305750 | 0.837186 | 6.028970e-57 | -8.615850e-47 |
| Msa0264050 | Msa1306190 | 0.800103 | 1.685857e-48 | -8.615850e-47 |
| Msa0264050 | Msa1306200 | 0.807020 | 6.196524e-50 | -8.615850e-47 |
| Msa0264050 | Msa1328850 | 0.808481 | 3.031928e-50 | -8.615850e-47 |
| Msa0264050 | Msa1336480 | 0.827082 | 1.903848e-54 | -8.615850e-47 |
| Msa0264050 | Msa1343340 | 0.803631 | 3.179408e-49 | -8.615850e-47 |
| Msa0264050 | Msa1361190 | 0.832437 | 9.459012e-56 | -8.615850e-47 |
| Msa0264050 | Msa1374440 | 0.815309 | 9.875945e-52 | -8.615850e-47 |
| Msa0264050 | Msa1378460 | 0.818002 | 2.460125e-52 | -8.615850e-47 |
| Msa0264050 | Msa1378470 | 0.813487 | 2.496592e-51 | -8.615850e-47 |
| Msa0264050 | Msa1385620 | 0.820552 | 6.458881e-53 | -8.615850e-47 |
| Msa0264050 | Msa1397970 | 0.815954 | 7.093657e-52 | -8.615850e-47 |
| Msa0264050 | Msa1405770 | 0.801768 | 7.705181e-49 | -8.615850e-47 |
| Msa0264050 | Msa1412520 | 0.813288 | 2.761365e-51 | -8.615850e-47 |
| Msa0264050 | Msa1422270 | 0.810863 | 9.326625e-51 | -8.615850e-47 |
| Msa0264050 | Msa1427830 | 0.806870 | 6.667134e-50 | -8.615850e-47 |
| Msa0264050 | Msa1432640 | 0.801260 | 9.792530e-49 | -8.615850e-47 |
| Msa0264050 | Msa1434020 | 0.814391 | 1.577619e-51 | -8.615850e-47 |
| Msa0264050 | Msa1439120 | 0.894845 | 1.681251e-75 | -8.615850e-47 |
| Msa0264050 | Msa1440180 | 0.800212 | 1.602627e-48 | -8.615850e-47 |
| Msa0264050 | Msa1440220 | 0.888420 | 5.996436e-73 | -8.615850e-47 |
| Msa0264050 | Msa1440610 | 0.836520 | 8.919942e-57 | -8.615850e-47 |
| Msa0264050 | Msa1442290 | 0.846520 | 2.063029e-59 | -8.615850e-47 |
| Msa0264050 | Msa1444450 | 0.812072 | 5.094381e-51 | -8.615850e-47 |
| Msa0264050 | Msa1449740 | 0.802333 | 5.897490e-49 | -8.615850e-47 |
| Msa0264050 | Msa1450020 | 0.813658 | 2.290169e-51 | -8.615850e-47 |
| Msa0264050 | Msa1454110 | 0.808331 | 3.263505e-50 | -8.615850e-47 |
| Msa0264050 | Msa1455660 | 0.891520 | 3.687264e-74 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264050 | MtrunA17_Chr2g0327721 | 96.795 | 468 | 13 | 2 | 1 | 466 | 13 | 480 | 0.0 | 936 |
| Msa0264050 | MtrunA17_Chr4g0030601 | 71.335 | 457 | 120 | 3 | 1 | 456 | 13 | 459 | 0.0 | 707 |
| Msa0264050 | MtrunA17_Chr4g0030581 | 72.570 | 463 | 122 | 3 | 1 | 462 | 13 | 471 | 0.0 | 703 |
| Msa0264050 | MtrunA17_Chr4g0030591 | 70.259 | 464 | 132 | 3 | 1 | 462 | 13 | 472 | 0.0 | 686 |
| Msa0264050 | MtrunA17_Chr1g0212951 | 54.566 | 449 | 184 | 5 | 13 | 447 | 26 | 468 | 0.0 | 516 |
| Msa0264050 | MtrunA17_Chr7g0276251 | 44.186 | 430 | 221 | 6 | 14 | 436 | 117 | 534 | 1.53e-123 | 370 |
| Msa0264050 | MtrunA17_Chr1g0188051 | 41.379 | 435 | 233 | 8 | 3 | 432 | 88 | 505 | 2.05e-109 | 333 |
| Msa0264050 | MtrunA17_Chr1g0209881 | 40.553 | 434 | 238 | 7 | 3 | 432 | 72 | 489 | 2.96e-109 | 332 |
| Msa0264050 | MtrunA17_Chr5g0423521 | 41.055 | 436 | 234 | 7 | 4 | 432 | 70 | 489 | 5.47e-109 | 332 |
| Msa0264050 | MtrunA17_Chr4g0035081 | 40.000 | 420 | 232 | 5 | 15 | 430 | 96 | 499 | 5.38e-108 | 329 |
| Msa0264050 | MtrunA17_Chr3g0136561 | 39.813 | 427 | 234 | 5 | 15 | 430 | 486 | 900 | 1.08e-105 | 334 |
| Msa0264050 | MtrunA17_Chr4g0063011 | 38.584 | 438 | 228 | 5 | 15 | 448 | 87 | 487 | 4.78e-105 | 322 |
| Msa0264050 | MtrunA17_Chr1g0166191 | 39.007 | 423 | 237 | 4 | 15 | 432 | 105 | 511 | 1.54e-104 | 321 |
| Msa0264050 | MtrunA17_Chr2g0306781 | 41.689 | 379 | 200 | 4 | 57 | 430 | 34 | 396 | 7.18e-99 | 302 |
| Msa0264050 | MtrunA17_Chr2g0277841 | 39.808 | 417 | 237 | 4 | 15 | 430 | 45 | 448 | 3.91e-96 | 297 |
| Msa0264050 | MtrunA17_Chr6g0480561 | 38.955 | 421 | 227 | 10 | 20 | 430 | 65 | 465 | 2.48e-94 | 293 |
| Msa0264050 | MtrunA17_Chr2g0295781 | 36.967 | 422 | 251 | 5 | 11 | 430 | 40 | 448 | 1.47e-91 | 285 |
| Msa0264050 | MtrunA17_Chr7g0276241 | 44.333 | 300 | 148 | 4 | 136 | 432 | 2 | 285 | 8.07e-89 | 273 |
| Msa0264050 | MtrunA17_Chr2g0282281 | 35.784 | 408 | 243 | 4 | 17 | 422 | 110 | 500 | 5.11e-88 | 278 |
| Msa0264050 | MtrunA17_Chr1g0204301 | 37.647 | 425 | 237 | 8 | 15 | 430 | 78 | 483 | 1.47e-85 | 271 |
| Msa0264050 | MtrunA17_Chr7g0250661 | 42.667 | 300 | 152 | 3 | 136 | 430 | 2 | 286 | 7.11e-83 | 257 |
| Msa0264050 | MtrunA17_Chr3g0115021 | 37.055 | 421 | 234 | 8 | 20 | 430 | 83 | 482 | 4.42e-82 | 261 |
| Msa0264050 | MtrunA17_Chr3g0115041 | 37.055 | 421 | 234 | 8 | 20 | 430 | 83 | 482 | 5.02e-82 | 261 |
| Msa0264050 | MtrunA17_Chr6g0469631 | 37.589 | 423 | 229 | 8 | 20 | 430 | 82 | 481 | 5.96e-78 | 251 |
| Msa0264050 | MtrunA17_Chr6g0461631 | 39.474 | 266 | 141 | 3 | 170 | 430 | 3 | 253 | 2.14e-61 | 201 |
| Msa0264050 | MtrunA17_Chr4g0026871 | 41.841 | 239 | 118 | 4 | 198 | 430 | 1 | 224 | 6.74e-57 | 188 |
| Msa0264050 | MtrunA17_Chr4g0026791 | 43.523 | 193 | 91 | 3 | 198 | 386 | 1 | 179 | 5.58e-44 | 152 |
| Msa0264050 | MtrunA17_Chr4g0026721 | 37.870 | 169 | 85 | 3 | 267 | 430 | 3 | 156 | 2.35e-32 | 120 |
| Msa0264050 | MtrunA17_Chr4g0026861 | 31.056 | 161 | 110 | 1 | 11 | 171 | 54 | 213 | 3.72e-22 | 94.4 |
| Msa0264050 | MtrunA17_Chr6g0461621 | 32.222 | 180 | 114 | 5 | 6 | 182 | 55 | 229 | 9.05e-21 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264050 | AT2G28630.2 | 66.300 | 454 | 148 | 3 | 7 | 456 | 19 | 471 | 0.0 | 636 |
| Msa0264050 | AT2G28630.1 | 66.300 | 454 | 148 | 3 | 7 | 456 | 19 | 471 | 0.0 | 636 |
| Msa0264050 | AT1G07720.2 | 65.310 | 467 | 143 | 4 | 2 | 456 | 57 | 516 | 0.0 | 631 |
| Msa0264050 | AT1G07720.1 | 65.310 | 467 | 143 | 4 | 2 | 456 | 14 | 473 | 0.0 | 630 |
| Msa0264050 | AT5G04530.1 | 53.244 | 447 | 196 | 5 | 5 | 447 | 18 | 455 | 2.37e-179 | 510 |
| Msa0264050 | AT1G01120.1 | 43.192 | 426 | 212 | 6 | 15 | 430 | 118 | 523 | 4.72e-123 | 369 |
| Msa0264050 | AT2G46720.1 | 38.940 | 434 | 248 | 6 | 3 | 432 | 44 | 464 | 1.02e-111 | 338 |
| Msa0264050 | AT4G34510.1 | 41.080 | 426 | 228 | 5 | 11 | 430 | 74 | 482 | 2.03e-110 | 335 |
| Msa0264050 | AT1G25450.1 | 41.435 | 432 | 233 | 7 | 3 | 430 | 68 | 483 | 3.36e-109 | 332 |
| Msa0264050 | AT4G34520.1 | 39.723 | 433 | 226 | 6 | 15 | 430 | 73 | 487 | 3.70e-108 | 330 |
| Msa0264050 | AT2G15090.1 | 38.182 | 440 | 248 | 7 | 1 | 430 | 51 | 476 | 3.38e-107 | 327 |
| Msa0264050 | AT2G16280.1 | 40.000 | 425 | 225 | 6 | 15 | 430 | 104 | 507 | 6.75e-107 | 327 |
| Msa0264050 | AT1G19440.1 | 38.353 | 425 | 232 | 6 | 15 | 430 | 108 | 511 | 3.58e-106 | 325 |
| Msa0264050 | AT5G43760.1 | 40.749 | 427 | 226 | 7 | 15 | 430 | 107 | 517 | 2.51e-105 | 323 |
| Msa0264050 | AT4G34250.1 | 38.426 | 432 | 228 | 6 | 15 | 430 | 75 | 484 | 3.27e-105 | 322 |
| Msa0264050 | AT2G26640.1 | 40.411 | 438 | 233 | 8 | 1 | 430 | 83 | 500 | 4.17e-105 | 322 |
| Msa0264050 | AT3G10280.1 | 37.182 | 433 | 250 | 5 | 3 | 432 | 44 | 457 | 5.37e-105 | 320 |
| Msa0264050 | AT1G68530.1 | 40.573 | 419 | 231 | 7 | 15 | 430 | 85 | 488 | 1.14e-104 | 321 |
| Msa0264050 | AT1G04220.1 | 38.864 | 440 | 240 | 8 | 3 | 430 | 90 | 512 | 2.62e-103 | 318 |
| Msa0264050 | AT2G26250.1 | 35.780 | 436 | 255 | 5 | 15 | 430 | 117 | 547 | 2.33e-98 | 306 |
| Msa0264050 | AT5G49070.1 | 37.176 | 425 | 255 | 4 | 6 | 430 | 40 | 452 | 6.32e-95 | 295 |
| Msa0264050 | AT1G71160.1 | 36.740 | 411 | 247 | 3 | 20 | 430 | 48 | 445 | 6.34e-92 | 286 |
| Msa0264050 | AT3G52160.1 | 31.796 | 412 | 236 | 4 | 4 | 414 | 73 | 440 | 3.25e-75 | 243 |
| Msa0264050 | AT3G52160.2 | 34.270 | 356 | 189 | 4 | 60 | 414 | 16 | 327 | 2.83e-71 | 229 |
| Msa0264050 | AT1G68530.2 | 38.007 | 271 | 161 | 3 | 15 | 282 | 85 | 351 | 5.95e-58 | 196 |
| Msa0264050 | AT5G49070.2 | 31.183 | 279 | 189 | 2 | 3 | 281 | 37 | 312 | 1.90e-40 | 147 |
Find 74 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAAATGCAACAGTTGTTAT+TGG | 0.230294 | 2_2:+63905873 | Msa0264050:CDS |
| CTTAGTACAAATTGGTATTC+AGG | 0.248106 | 2_2:+63905227 | Msa0264050:CDS |
| AAAGCTCTTGTAGCTGCTTT+TGG | 0.259427 | 2_2:-63905464 | None:intergenic |
| TACCAGCTAGGGAAATATTT+AGG | 0.265669 | 2_2:+63905522 | Msa0264050:CDS |
| ATGACATTCTTGCTGGTTCT+AGG | 0.278483 | 2_2:-63905733 | None:intergenic |
| CGGCCTTCGATGAAGTTTCT+TGG | 0.294675 | 2_2:-63904891 | None:intergenic |
| GTGGTATGTGTTGGGGTATA+TGG | 0.299234 | 2_2:+63905790 | Msa0264050:CDS |
| GAACAATGTGGCAAGATTAT+AGG | 0.312551 | 2_2:+63904783 | Msa0264050:CDS |
| TTACTATCCACCACACTCTT+TGG | 0.331528 | 2_2:+63905952 | Msa0264050:CDS |
| CCATCGTTGGGTTCACAGTT+CGG | 0.347303 | 2_2:-63904911 | None:intergenic |
| TCCACTTCGTCTTCCATCGT+TGG | 0.351430 | 2_2:-63904924 | None:intergenic |
| CAGAGTCTCTTAGTACAAAT+TGG | 0.351617 | 2_2:+63905219 | Msa0264050:CDS |
| AGAATGTCATTACATAGATT+TGG | 0.358478 | 2_2:+63905746 | Msa0264050:CDS |
| TGCACTTGTGTTTCCTGATC+TGG | 0.359947 | 2_2:+63904673 | Msa0264050:CDS |
| TAAATGCAACAGTTGTTATT+GGG | 0.360260 | 2_2:+63905874 | Msa0264050:CDS |
| AGTTTGAGTTTGAAAGTGTT+TGG | 0.363208 | 2_2:-63906022 | None:intergenic |
| CTCTTTGGCCAACCCATTCA+TGG | 0.371696 | 2_2:+63905967 | Msa0264050:CDS |
| CTATGTAATGACATTCTTGC+TGG | 0.374650 | 2_2:-63905740 | None:intergenic |
| ATAAAAGCTTATAACCTATC+TGG | 0.375637 | 2_2:+63905107 | Msa0264050:CDS |
| AAAGCAGTGATAGATGGAAT+TGG | 0.380405 | 2_2:+63905683 | Msa0264050:CDS |
| CCACTTCGTCTTCCATCGTT+GGG | 0.388821 | 2_2:-63904923 | None:intergenic |
| CAACCGTACTTCTCCATGAA+TGG | 0.407631 | 2_2:-63905980 | None:intergenic |
| GGAAGACGAAGTGGAGGAAA+TGG | 0.412780 | 2_2:+63904932 | Msa0264050:CDS |
| CCAAGTGATGAAAGAAAACT+TGG | 0.421127 | 2_2:+63904756 | Msa0264050:CDS |
| AGCTTATAACCTATCTGGTA+TGG | 0.425685 | 2_2:+63905112 | Msa0264050:CDS |
| GCAAAGCTTCTAAACAAATC+AGG | 0.429501 | 2_2:+63904978 | Msa0264050:CDS |
| ATAGGAAACAATGAGAATAT+TGG | 0.429933 | 2_2:+63904801 | Msa0264050:CDS |
| CTGAGTTGACAACGGCTTTG+AGG | 0.431728 | 2_2:-63904845 | None:intergenic |
| ATTGGTATTCAGGAAACAAT+AGG | 0.432471 | 2_2:+63905237 | Msa0264050:CDS |
| AAGCAGTGATAGATGGAATT+GGG | 0.433566 | 2_2:+63905684 | Msa0264050:CDS |
| AAGTCAGCTGCAAGATGGTT+TGG | 0.438277 | 2_2:+63905593 | Msa0264050:CDS |
| GGAGGAAAAGCAGTGATAGA+TGG | 0.443045 | 2_2:+63905677 | Msa0264050:CDS |
| AGAGTATTGATGATAAGTTT+AGG | 0.443493 | 2_2:+63905842 | Msa0264050:CDS |
| ATGATTCTTGAAGTTAAAGA+AGG | 0.444901 | 2_2:-63905059 | None:intergenic |
| TACCTAAATATTTCCCTAGC+TGG | 0.449686 | 2_2:-63905524 | None:intergenic |
| AGTAGTTTGTGGTATGTGTT+GGG | 0.450299 | 2_2:+63905782 | Msa0264050:CDS |
| CAAATCAGGCATTTCACCTT+CGG | 0.453132 | 2_2:+63904992 | Msa0264050:CDS |
| TCACCAGTGAATTTCAAAAC+AGG | 0.477090 | 2_2:+63905629 | Msa0264050:CDS |
| CTCAAAGCCGTTGTCAACTC+AGG | 0.488420 | 2_2:+63904846 | Msa0264050:CDS |
| AACCGTACTTCTCCATGAAT+GGG | 0.497250 | 2_2:-63905979 | None:intergenic |
| GAAGATGAACAAGGTAAACT+TGG | 0.499726 | 2_2:+63905419 | Msa0264050:CDS |
| AACCATCTTGCAGCTGACTT+AGG | 0.502261 | 2_2:-63905590 | None:intergenic |
| AGTTTAATATGTAACACTCT+TGG | 0.508115 | 2_2:-63904719 | None:intergenic |
| CTCCTAAGTCAGCTGCAAGA+TGG | 0.509644 | 2_2:+63905588 | Msa0264050:CDS |
| TTGATGATAAGTTTAGGTGC+TGG | 0.511949 | 2_2:+63905848 | Msa0264050:CDS |
| AAGTAGTTTGTGGTATGTGT+TGG | 0.515984 | 2_2:+63905781 | Msa0264050:CDS |
| GCCGTTGTCAACTCAGGCAT+TGG | 0.520687 | 2_2:+63904852 | Msa0264050:CDS |
| GAAGTAATGAGAGATGTTGT+TGG | 0.523138 | 2_2:+63905896 | Msa0264050:CDS |
| CACTACAACCCATACCAGAT+AGG | 0.541455 | 2_2:-63905121 | None:intergenic |
| AGAGATGTTGTTGGTGACGA+TGG | 0.546076 | 2_2:+63905905 | Msa0264050:CDS |
| GCTTATAACCTATCTGGTAT+GGG | 0.546638 | 2_2:+63905113 | Msa0264050:CDS |
| ATACATCAGCAAGTAGTTTG+TGG | 0.556511 | 2_2:+63905771 | Msa0264050:CDS |
| GAATTGCACAACCGCCGGTA+CGG | 0.562704 | 2_2:-63905286 | None:intergenic |
| TTCGGAGATCGATATTCTTG+TGG | 0.562977 | 2_2:+63905010 | Msa0264050:CDS |
| CATTCATGGAGAAGTACGGT+TGG | 0.603031 | 2_2:+63905981 | Msa0264050:CDS |
| TGTCTAGTTAGAACTCATCA+TGG | 0.608151 | 2_2:+63905359 | Msa0264050:CDS |
| AACCCATTCATGGAGAAGTA+CGG | 0.611169 | 2_2:+63905977 | Msa0264050:CDS |
| GTACTTCTCCATGAATGGGT+TGG | 0.611489 | 2_2:-63905975 | None:intergenic |
| AACGATGGAAGACGAAGTGG+AGG | 0.619961 | 2_2:+63904926 | Msa0264050:CDS |
| GGTATATGGAAGCTAAGAAG+AGG | 0.621077 | 2_2:+63905804 | Msa0264050:CDS |
| CCCAACGATGGAAGACGAAG+TGG | 0.624451 | 2_2:+63904923 | Msa0264050:CDS |
| GCTCCAAGAAACTTCATCGA+AGG | 0.628524 | 2_2:+63904888 | Msa0264050:CDS |
| GAGAAGAATTGCACAACCGC+CGG | 0.629617 | 2_2:-63905291 | None:intergenic |
| GTAGTTTGTGGTATGTGTTG+GGG | 0.633510 | 2_2:+63905783 | Msa0264050:CDS |
| TGTCAACTCAGGCATTGGTG+AGG | 0.663337 | 2_2:+63904857 | Msa0264050:CDS |
| TAACCATTACAAAATGAGAG+AGG | 0.665552 | 2_2:+63905082 | Msa0264050:CDS |
| CCGAACTGTGAACCCAACGA+TGG | 0.667415 | 2_2:+63904911 | Msa0264050:CDS |
| ACAAGAATATCGATCTCCGA+AGG | 0.671733 | 2_2:-63905008 | None:intergenic |
| TGGTGACGATGGAAATGTGT+GGG | 0.681456 | 2_2:+63905916 | Msa0264050:CDS |
| ACCAATGCCTGAGTTGACAA+CGG | 0.693257 | 2_2:-63904853 | None:intergenic |
| AATGGGTTGGCCAAAGAGTG+TGG | 0.696430 | 2_2:-63905962 | None:intergenic |
| TTGGTGACGATGGAAATGTG+TGG | 0.725183 | 2_2:+63905915 | Msa0264050:CDS |
| GGGTTGGCCAAAGAGTGTGG+TGG | 0.735704 | 2_2:-63905959 | None:intergenic |
| AAACTTGGAAGTGAACAATG+TGG | 0.743662 | 2_2:+63904771 | Msa0264050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGCTTTTACTGATAATTTAA+GGG | + | chr2_2:63905481-63905500 | Msa0264050:CDS | 20.0% |
| !!! | AGCTTTTACTGATAATTTAA+GGG | + | chr2_2:63905481-63905500 | Msa0264050:CDS | 20.0% |
| ! | GAAAAAATTTGATCAGAGAA+GGG | + | chr2_2:63904695-63904714 | Msa0264050:CDS | 25.0% |
| ! | AGTTTAATATGTAACACTCT+TGG | - | chr2_2:63904722-63904741 | None:intergenic | 25.0% |
| ! | ATAGGAAACAATGAGAATAT+TGG | + | chr2_2:63904801-63904820 | Msa0264050:CDS | 25.0% |
| ! | ATGATTCTTGAAGTTAAAGA+AGG | - | chr2_2:63905062-63905081 | None:intergenic | 25.0% |
| ! | ATAAAAGCTTATAACCTATC+TGG | + | chr2_2:63905107-63905126 | Msa0264050:CDS | 25.0% |
| !!! | CAATATAGCTTTGTGTTTTA+AGG | - | chr2_2:63905330-63905349 | None:intergenic | 25.0% |
| !! | GAGCTTTTACTGATAATTTA+AGG | + | chr2_2:63905480-63905499 | Msa0264050:CDS | 25.0% |
| ! | AGAATGTCATTACATAGATT+TGG | + | chr2_2:63905746-63905765 | Msa0264050:CDS | 25.0% |
| !!! | AGAGTATTGATGATAAGTTT+AGG | + | chr2_2:63905842-63905861 | Msa0264050:CDS | 25.0% |
| ! | TTAAATGCAACAGTTGTTAT+TGG | + | chr2_2:63905873-63905892 | Msa0264050:CDS | 25.0% |
| !! | TAAATGCAACAGTTGTTATT+GGG | + | chr2_2:63905874-63905893 | Msa0264050:CDS | 25.0% |
| ! | GAAAAAATTTGATCAGAGAA+GGG | + | chr2_2:63904695-63904714 | Msa0264050:CDS | 25.0% |
| ! | AGTTTAATATGTAACACTCT+TGG | - | chr2_2:63904722-63904741 | None:intergenic | 25.0% |
| ! | ATAGGAAACAATGAGAATAT+TGG | + | chr2_2:63904801-63904820 | Msa0264050:CDS | 25.0% |
| ! | ATGATTCTTGAAGTTAAAGA+AGG | - | chr2_2:63905062-63905081 | None:intergenic | 25.0% |
| ! | ATAAAAGCTTATAACCTATC+TGG | + | chr2_2:63905107-63905126 | Msa0264050:CDS | 25.0% |
| !!! | CAATATAGCTTTGTGTTTTA+AGG | - | chr2_2:63905330-63905349 | None:intergenic | 25.0% |
| !! | GAGCTTTTACTGATAATTTA+AGG | + | chr2_2:63905480-63905499 | Msa0264050:CDS | 25.0% |
| ! | AGAATGTCATTACATAGATT+TGG | + | chr2_2:63905746-63905765 | Msa0264050:CDS | 25.0% |
| !!! | AGAGTATTGATGATAAGTTT+AGG | + | chr2_2:63905842-63905861 | Msa0264050:CDS | 25.0% |
| ! | TTAAATGCAACAGTTGTTAT+TGG | + | chr2_2:63905873-63905892 | Msa0264050:CDS | 25.0% |
| !! | TAAATGCAACAGTTGTTATT+GGG | + | chr2_2:63905874-63905893 | Msa0264050:CDS | 25.0% |
| !!! | GATCAAATTTTTTCCAGATC+AGG | - | chr2_2:63904689-63904708 | None:intergenic | 30.0% |
| GGAAAAAATTTGATCAGAGA+AGG | + | chr2_2:63904694-63904713 | Msa0264050:CDS | 30.0% | |
| TAACCATTACAAAATGAGAG+AGG | + | chr2_2:63905082-63905101 | Msa0264050:CDS | 30.0% | |
| CTTAGTACAAATTGGTATTC+AGG | + | chr2_2:63905227-63905246 | Msa0264050:CDS | 30.0% | |
| ATTGGTATTCAGGAAACAAT+AGG | + | chr2_2:63905237-63905256 | Msa0264050:CDS | 30.0% | |
| AGTCAAAAAGAAGATGAACA+AGG | + | chr2_2:63905410-63905429 | Msa0264050:CDS | 30.0% | |
| ! | ACCTAAAATTTTACCAGCTA+GGG | + | chr2_2:63905511-63905530 | Msa0264050:CDS | 30.0% |
| !! | AGTTTGAGTTTGAAAGTGTT+TGG | - | chr2_2:63906025-63906044 | None:intergenic | 30.0% |
| !!! | GATCAAATTTTTTCCAGATC+AGG | - | chr2_2:63904689-63904708 | None:intergenic | 30.0% |
| GGAAAAAATTTGATCAGAGA+AGG | + | chr2_2:63904694-63904713 | Msa0264050:CDS | 30.0% | |
| TAACCATTACAAAATGAGAG+AGG | + | chr2_2:63905082-63905101 | Msa0264050:CDS | 30.0% | |
| CTTAGTACAAATTGGTATTC+AGG | + | chr2_2:63905227-63905246 | Msa0264050:CDS | 30.0% | |
| ATTGGTATTCAGGAAACAAT+AGG | + | chr2_2:63905237-63905256 | Msa0264050:CDS | 30.0% | |
| AGTCAAAAAGAAGATGAACA+AGG | + | chr2_2:63905410-63905429 | Msa0264050:CDS | 30.0% | |
| ! | ACCTAAAATTTTACCAGCTA+GGG | + | chr2_2:63905511-63905530 | Msa0264050:CDS | 30.0% |
| !! | AGTTTGAGTTTGAAAGTGTT+TGG | - | chr2_2:63906025-63906044 | None:intergenic | 30.0% |
| ! | CCAAGTTTTCTTTCATCACT+TGG | - | chr2_2:63904759-63904778 | None:intergenic | 35.0% |
| CCAAGTGATGAAAGAAAACT+TGG | + | chr2_2:63904756-63904775 | Msa0264050:CDS | 35.0% | |
| AAACTTGGAAGTGAACAATG+TGG | + | chr2_2:63904771-63904790 | Msa0264050:CDS | 35.0% | |
| GAACAATGTGGCAAGATTAT+AGG | + | chr2_2:63904783-63904802 | Msa0264050:CDS | 35.0% | |
| GCAAAGCTTCTAAACAAATC+AGG | + | chr2_2:63904978-63904997 | Msa0264050:CDS | 35.0% | |
| ! | TGTCCTCTCTCATTTTGTAA+TGG | - | chr2_2:63905088-63905107 | None:intergenic | 35.0% |
| AGCTTATAACCTATCTGGTA+TGG | + | chr2_2:63905112-63905131 | Msa0264050:CDS | 35.0% | |
| GCTTATAACCTATCTGGTAT+GGG | + | chr2_2:63905113-63905132 | Msa0264050:CDS | 35.0% | |
| CAGAGTCTCTTAGTACAAAT+TGG | + | chr2_2:63905219-63905238 | Msa0264050:CDS | 35.0% | |
| TGTCTAGTTAGAACTCATCA+TGG | + | chr2_2:63905359-63905378 | Msa0264050:CDS | 35.0% | |
| GAAGATGAACAAGGTAAACT+TGG | + | chr2_2:63905419-63905438 | Msa0264050:CDS | 35.0% | |
| !! | CTTTTGGAAGATCTTTAGCT+AGG | - | chr2_2:63905451-63905470 | None:intergenic | 35.0% |
| ! | CACCTAAAATTTTACCAGCT+AGG | + | chr2_2:63905510-63905529 | Msa0264050:CDS | 35.0% |
| ! | TCCCTAGCTGGTAAAATTTT+AGG | - | chr2_2:63905515-63905534 | None:intergenic | 35.0% |
| TACCAGCTAGGGAAATATTT+AGG | + | chr2_2:63905522-63905541 | Msa0264050:CDS | 35.0% | |
| TACCTAAATATTTCCCTAGC+TGG | - | chr2_2:63905527-63905546 | None:intergenic | 35.0% | |
| TCACCAGTGAATTTCAAAAC+AGG | + | chr2_2:63905629-63905648 | Msa0264050:CDS | 35.0% | |
| !!! | ACACCTGTTTTGAAATTCAC+TGG | - | chr2_2:63905635-63905654 | None:intergenic | 35.0% |
| ! | GATCATTTTGTTCTTCACAC+TGG | + | chr2_2:63905656-63905675 | Msa0264050:CDS | 35.0% |
| AAAGCAGTGATAGATGGAAT+TGG | + | chr2_2:63905683-63905702 | Msa0264050:CDS | 35.0% | |
| AAGCAGTGATAGATGGAATT+GGG | + | chr2_2:63905684-63905703 | Msa0264050:CDS | 35.0% | |
| CTATGTAATGACATTCTTGC+TGG | - | chr2_2:63905743-63905762 | None:intergenic | 35.0% | |
| ATACATCAGCAAGTAGTTTG+TGG | + | chr2_2:63905771-63905790 | Msa0264050:CDS | 35.0% | |
| ! | AAGTAGTTTGTGGTATGTGT+TGG | + | chr2_2:63905781-63905800 | Msa0264050:CDS | 35.0% |
| ! | AGTAGTTTGTGGTATGTGTT+GGG | + | chr2_2:63905782-63905801 | Msa0264050:CDS | 35.0% |
| GCTAAGAAGAGGTTGAAAAA+AGG | + | chr2_2:63905815-63905834 | Msa0264050:CDS | 35.0% | |
| ! | TTGATGATAAGTTTAGGTGC+TGG | + | chr2_2:63905848-63905867 | Msa0264050:CDS | 35.0% |
| GAAGTAATGAGAGATGTTGT+TGG | + | chr2_2:63905896-63905915 | Msa0264050:CDS | 35.0% | |
| ! | CCAAGTTTTCTTTCATCACT+TGG | - | chr2_2:63904759-63904778 | None:intergenic | 35.0% |
| CCAAGTGATGAAAGAAAACT+TGG | + | chr2_2:63904756-63904775 | Msa0264050:CDS | 35.0% | |
| AAACTTGGAAGTGAACAATG+TGG | + | chr2_2:63904771-63904790 | Msa0264050:CDS | 35.0% | |
| GAACAATGTGGCAAGATTAT+AGG | + | chr2_2:63904783-63904802 | Msa0264050:CDS | 35.0% | |
| GCAAAGCTTCTAAACAAATC+AGG | + | chr2_2:63904978-63904997 | Msa0264050:CDS | 35.0% | |
| ! | TGTCCTCTCTCATTTTGTAA+TGG | - | chr2_2:63905088-63905107 | None:intergenic | 35.0% |
| AGCTTATAACCTATCTGGTA+TGG | + | chr2_2:63905112-63905131 | Msa0264050:CDS | 35.0% | |
| GCTTATAACCTATCTGGTAT+GGG | + | chr2_2:63905113-63905132 | Msa0264050:CDS | 35.0% | |
| CAGAGTCTCTTAGTACAAAT+TGG | + | chr2_2:63905219-63905238 | Msa0264050:CDS | 35.0% | |
| TGTCTAGTTAGAACTCATCA+TGG | + | chr2_2:63905359-63905378 | Msa0264050:CDS | 35.0% | |
| GAAGATGAACAAGGTAAACT+TGG | + | chr2_2:63905419-63905438 | Msa0264050:CDS | 35.0% | |
| !! | CTTTTGGAAGATCTTTAGCT+AGG | - | chr2_2:63905451-63905470 | None:intergenic | 35.0% |
| ! | CACCTAAAATTTTACCAGCT+AGG | + | chr2_2:63905510-63905529 | Msa0264050:CDS | 35.0% |
| ! | TCCCTAGCTGGTAAAATTTT+AGG | - | chr2_2:63905515-63905534 | None:intergenic | 35.0% |
| TACCAGCTAGGGAAATATTT+AGG | + | chr2_2:63905522-63905541 | Msa0264050:CDS | 35.0% | |
| TACCTAAATATTTCCCTAGC+TGG | - | chr2_2:63905527-63905546 | None:intergenic | 35.0% | |
| TCACCAGTGAATTTCAAAAC+AGG | + | chr2_2:63905629-63905648 | Msa0264050:CDS | 35.0% | |
| !!! | ACACCTGTTTTGAAATTCAC+TGG | - | chr2_2:63905635-63905654 | None:intergenic | 35.0% |
| ! | GATCATTTTGTTCTTCACAC+TGG | + | chr2_2:63905656-63905675 | Msa0264050:CDS | 35.0% |
| AAAGCAGTGATAGATGGAAT+TGG | + | chr2_2:63905683-63905702 | Msa0264050:CDS | 35.0% | |
| AAGCAGTGATAGATGGAATT+GGG | + | chr2_2:63905684-63905703 | Msa0264050:CDS | 35.0% | |
| CTATGTAATGACATTCTTGC+TGG | - | chr2_2:63905743-63905762 | None:intergenic | 35.0% | |
| ATACATCAGCAAGTAGTTTG+TGG | + | chr2_2:63905771-63905790 | Msa0264050:CDS | 35.0% | |
| ! | AAGTAGTTTGTGGTATGTGT+TGG | + | chr2_2:63905781-63905800 | Msa0264050:CDS | 35.0% |
| ! | AGTAGTTTGTGGTATGTGTT+GGG | + | chr2_2:63905782-63905801 | Msa0264050:CDS | 35.0% |
| GCTAAGAAGAGGTTGAAAAA+AGG | + | chr2_2:63905815-63905834 | Msa0264050:CDS | 35.0% | |
| ! | TTGATGATAAGTTTAGGTGC+TGG | + | chr2_2:63905848-63905867 | Msa0264050:CDS | 35.0% |
| GAAGTAATGAGAGATGTTGT+TGG | + | chr2_2:63905896-63905915 | Msa0264050:CDS | 35.0% | |
| CAAATCAGGCATTTCACCTT+CGG | + | chr2_2:63904992-63905011 | Msa0264050:CDS | 40.0% | |
| ACAAGAATATCGATCTCCGA+AGG | - | chr2_2:63905011-63905030 | None:intergenic | 40.0% | |
| TTCGGAGATCGATATTCTTG+TGG | + | chr2_2:63905010-63905029 | Msa0264050:CDS | 40.0% | |
| ! | GCAAATTGTCTTTTCCGTAC+CGG | + | chr2_2:63905272-63905291 | Msa0264050:CDS | 40.0% |
| !! | AAAGCTCTTGTAGCTGCTTT+TGG | - | chr2_2:63905467-63905486 | None:intergenic | 40.0% |
| ! | CATTTTGTTCTTCACACTGG+AGG | + | chr2_2:63905659-63905678 | Msa0264050:CDS | 40.0% |
| !! | ATGACATTCTTGCTGGTTCT+AGG | - | chr2_2:63905736-63905755 | None:intergenic | 40.0% |
| ! | GTAGTTTGTGGTATGTGTTG+GGG | + | chr2_2:63905783-63905802 | Msa0264050:CDS | 40.0% |
| GGTATATGGAAGCTAAGAAG+AGG | + | chr2_2:63905804-63905823 | Msa0264050:CDS | 40.0% | |
| TTACTATCCACCACACTCTT+TGG | + | chr2_2:63905952-63905971 | Msa0264050:CDS | 40.0% | |
| AACCCATTCATGGAGAAGTA+CGG | + | chr2_2:63905977-63905996 | Msa0264050:CDS | 40.0% | |
| AACCGTACTTCTCCATGAAT+GGG | - | chr2_2:63905982-63906001 | None:intergenic | 40.0% | |
| CAAATCAGGCATTTCACCTT+CGG | + | chr2_2:63904992-63905011 | Msa0264050:CDS | 40.0% | |
| ACAAGAATATCGATCTCCGA+AGG | - | chr2_2:63905011-63905030 | None:intergenic | 40.0% | |
| TTCGGAGATCGATATTCTTG+TGG | + | chr2_2:63905010-63905029 | Msa0264050:CDS | 40.0% | |
| ! | GCAAATTGTCTTTTCCGTAC+CGG | + | chr2_2:63905272-63905291 | Msa0264050:CDS | 40.0% |
| !! | AAAGCTCTTGTAGCTGCTTT+TGG | - | chr2_2:63905467-63905486 | None:intergenic | 40.0% |
| ! | CATTTTGTTCTTCACACTGG+AGG | + | chr2_2:63905659-63905678 | Msa0264050:CDS | 40.0% |
| !! | ATGACATTCTTGCTGGTTCT+AGG | - | chr2_2:63905736-63905755 | None:intergenic | 40.0% |
| ! | GTAGTTTGTGGTATGTGTTG+GGG | + | chr2_2:63905783-63905802 | Msa0264050:CDS | 40.0% |
| GGTATATGGAAGCTAAGAAG+AGG | + | chr2_2:63905804-63905823 | Msa0264050:CDS | 40.0% | |
| TTACTATCCACCACACTCTT+TGG | + | chr2_2:63905952-63905971 | Msa0264050:CDS | 40.0% | |
| AACCCATTCATGGAGAAGTA+CGG | + | chr2_2:63905977-63905996 | Msa0264050:CDS | 40.0% | |
| AACCGTACTTCTCCATGAAT+GGG | - | chr2_2:63905982-63906001 | None:intergenic | 40.0% | |
| TGCACTTGTGTTTCCTGATC+TGG | + | chr2_2:63904673-63904692 | Msa0264050:CDS | 45.0% | |
| ! | ACCAATGCCTGAGTTGACAA+CGG | - | chr2_2:63904856-63904875 | None:intergenic | 45.0% |
| GCTCCAAGAAACTTCATCGA+AGG | + | chr2_2:63904888-63904907 | Msa0264050:CDS | 45.0% | |
| CACTACAACCCATACCAGAT+AGG | - | chr2_2:63905124-63905143 | None:intergenic | 45.0% | |
| ! | AATTGTCTTTTCCGTACCGG+CGG | + | chr2_2:63905275-63905294 | Msa0264050:CDS | 45.0% |
| ! | AACCATCTTGCAGCTGACTT+AGG | - | chr2_2:63905593-63905612 | None:intergenic | 45.0% |
| AAGTCAGCTGCAAGATGGTT+TGG | + | chr2_2:63905593-63905612 | Msa0264050:CDS | 45.0% | |
| GGAGGAAAAGCAGTGATAGA+TGG | + | chr2_2:63905677-63905696 | Msa0264050:CDS | 45.0% | |
| GTGGTATGTGTTGGGGTATA+TGG | + | chr2_2:63905790-63905809 | Msa0264050:CDS | 45.0% | |
| !! | AGAGATGTTGTTGGTGACGA+TGG | + | chr2_2:63905905-63905924 | Msa0264050:CDS | 45.0% |
| !! | TTGGTGACGATGGAAATGTG+TGG | + | chr2_2:63905915-63905934 | Msa0264050:CDS | 45.0% |
| ! | TGGTGACGATGGAAATGTGT+GGG | + | chr2_2:63905916-63905935 | Msa0264050:CDS | 45.0% |
| GTACTTCTCCATGAATGGGT+TGG | - | chr2_2:63905978-63905997 | None:intergenic | 45.0% | |
| CAACCGTACTTCTCCATGAA+TGG | - | chr2_2:63905983-63906002 | None:intergenic | 45.0% | |
| ! | CATTCATGGAGAAGTACGGT+TGG | + | chr2_2:63905981-63906000 | Msa0264050:CDS | 45.0% |
| TGCACTTGTGTTTCCTGATC+TGG | + | chr2_2:63904673-63904692 | Msa0264050:CDS | 45.0% | |
| ! | ACCAATGCCTGAGTTGACAA+CGG | - | chr2_2:63904856-63904875 | None:intergenic | 45.0% |
| GCTCCAAGAAACTTCATCGA+AGG | + | chr2_2:63904888-63904907 | Msa0264050:CDS | 45.0% | |
| CACTACAACCCATACCAGAT+AGG | - | chr2_2:63905124-63905143 | None:intergenic | 45.0% | |
| ! | AATTGTCTTTTCCGTACCGG+CGG | + | chr2_2:63905275-63905294 | Msa0264050:CDS | 45.0% |
| ! | AACCATCTTGCAGCTGACTT+AGG | - | chr2_2:63905593-63905612 | None:intergenic | 45.0% |
| AAGTCAGCTGCAAGATGGTT+TGG | + | chr2_2:63905593-63905612 | Msa0264050:CDS | 45.0% | |
| GGAGGAAAAGCAGTGATAGA+TGG | + | chr2_2:63905677-63905696 | Msa0264050:CDS | 45.0% | |
| GTGGTATGTGTTGGGGTATA+TGG | + | chr2_2:63905790-63905809 | Msa0264050:CDS | 45.0% | |
| !! | AGAGATGTTGTTGGTGACGA+TGG | + | chr2_2:63905905-63905924 | Msa0264050:CDS | 45.0% |
| !! | TTGGTGACGATGGAAATGTG+TGG | + | chr2_2:63905915-63905934 | Msa0264050:CDS | 45.0% |
| ! | TGGTGACGATGGAAATGTGT+GGG | + | chr2_2:63905916-63905935 | Msa0264050:CDS | 45.0% |
| GTACTTCTCCATGAATGGGT+TGG | - | chr2_2:63905978-63905997 | None:intergenic | 45.0% | |
| CAACCGTACTTCTCCATGAA+TGG | - | chr2_2:63905983-63906002 | None:intergenic | 45.0% | |
| ! | CATTCATGGAGAAGTACGGT+TGG | + | chr2_2:63905981-63906000 | Msa0264050:CDS | 45.0% |
| ! | CTGAGTTGACAACGGCTTTG+AGG | - | chr2_2:63904848-63904867 | None:intergenic | 50.0% |
| CTCAAAGCCGTTGTCAACTC+AGG | + | chr2_2:63904846-63904865 | Msa0264050:CDS | 50.0% | |
| !! | TGTCAACTCAGGCATTGGTG+AGG | + | chr2_2:63904857-63904876 | Msa0264050:CDS | 50.0% |
| CGGCCTTCGATGAAGTTTCT+TGG | - | chr2_2:63904894-63904913 | None:intergenic | 50.0% | |
| CCATCGTTGGGTTCACAGTT+CGG | - | chr2_2:63904914-63904933 | None:intergenic | 50.0% | |
| CCACTTCGTCTTCCATCGTT+GGG | - | chr2_2:63904926-63904945 | None:intergenic | 50.0% | |
| TCCACTTCGTCTTCCATCGT+TGG | - | chr2_2:63904927-63904946 | None:intergenic | 50.0% | |
| AACGATGGAAGACGAAGTGG+AGG | + | chr2_2:63904926-63904945 | Msa0264050:CDS | 50.0% | |
| GGAAGACGAAGTGGAGGAAA+TGG | + | chr2_2:63904932-63904951 | Msa0264050:CDS | 50.0% | |
| GAGAAGAATTGCACAACCGC+CGG | - | chr2_2:63905294-63905313 | None:intergenic | 50.0% | |
| CTCCTAAGTCAGCTGCAAGA+TGG | + | chr2_2:63905588-63905607 | Msa0264050:CDS | 50.0% | |
| !! | AATGGGTTGGCCAAAGAGTG+TGG | - | chr2_2:63905965-63905984 | None:intergenic | 50.0% |
| CTCTTTGGCCAACCCATTCA+TGG | + | chr2_2:63905967-63905986 | Msa0264050:CDS | 50.0% | |
| ! | CTGAGTTGACAACGGCTTTG+AGG | - | chr2_2:63904848-63904867 | None:intergenic | 50.0% |
| CTCAAAGCCGTTGTCAACTC+AGG | + | chr2_2:63904846-63904865 | Msa0264050:CDS | 50.0% | |
| !! | TGTCAACTCAGGCATTGGTG+AGG | + | chr2_2:63904857-63904876 | Msa0264050:CDS | 50.0% |
| CGGCCTTCGATGAAGTTTCT+TGG | - | chr2_2:63904894-63904913 | None:intergenic | 50.0% | |
| CCATCGTTGGGTTCACAGTT+CGG | - | chr2_2:63904914-63904933 | None:intergenic | 50.0% | |
| CCACTTCGTCTTCCATCGTT+GGG | - | chr2_2:63904926-63904945 | None:intergenic | 50.0% | |
| TCCACTTCGTCTTCCATCGT+TGG | - | chr2_2:63904927-63904946 | None:intergenic | 50.0% | |
| AACGATGGAAGACGAAGTGG+AGG | + | chr2_2:63904926-63904945 | Msa0264050:CDS | 50.0% | |
| GGAAGACGAAGTGGAGGAAA+TGG | + | chr2_2:63904932-63904951 | Msa0264050:CDS | 50.0% | |
| GAGAAGAATTGCACAACCGC+CGG | - | chr2_2:63905294-63905313 | None:intergenic | 50.0% | |
| CTCCTAAGTCAGCTGCAAGA+TGG | + | chr2_2:63905588-63905607 | Msa0264050:CDS | 50.0% | |
| !! | AATGGGTTGGCCAAAGAGTG+TGG | - | chr2_2:63905965-63905984 | None:intergenic | 50.0% |
| CTCTTTGGCCAACCCATTCA+TGG | + | chr2_2:63905967-63905986 | Msa0264050:CDS | 50.0% | |
| GCCGTTGTCAACTCAGGCAT+TGG | + | chr2_2:63904852-63904871 | Msa0264050:CDS | 55.0% | |
| CCGAACTGTGAACCCAACGA+TGG | + | chr2_2:63904911-63904930 | Msa0264050:CDS | 55.0% | |
| CCCAACGATGGAAGACGAAG+TGG | + | chr2_2:63904923-63904942 | Msa0264050:CDS | 55.0% | |
| GAATTGCACAACCGCCGGTA+CGG | - | chr2_2:63905289-63905308 | None:intergenic | 55.0% | |
| GCCGTTGTCAACTCAGGCAT+TGG | + | chr2_2:63904852-63904871 | Msa0264050:CDS | 55.0% | |
| CCGAACTGTGAACCCAACGA+TGG | + | chr2_2:63904911-63904930 | Msa0264050:CDS | 55.0% | |
| CCCAACGATGGAAGACGAAG+TGG | + | chr2_2:63904923-63904942 | Msa0264050:CDS | 55.0% | |
| GAATTGCACAACCGCCGGTA+CGG | - | chr2_2:63905289-63905308 | None:intergenic | 55.0% | |
| !! | GGGTTGGCCAAAGAGTGTGG+TGG | - | chr2_2:63905962-63905981 | None:intergenic | 60.0% |
| !! | GGGTTGGCCAAAGAGTGTGG+TGG | - | chr2_2:63905962-63905981 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 63904672 | 63906072 | 63904672 | ID=Msa0264050;Name=Msa0264050 |
| chr2_2 | mRNA | 63904672 | 63906072 | 63904672 | ID=Msa0264050-mRNA-1;Parent=Msa0264050;Name=Msa0264050-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|-1|0|1|-1|1|1|0|466 |
| chr2_2 | exon | 63904672 | 63906072 | 63904672 | ID=Msa0264050-mRNA-1:exon:19894;Parent=Msa0264050-mRNA-1 |
| chr2_2 | CDS | 63904672 | 63906072 | 63904672 | ID=Msa0264050-mRNA-1:cds;Parent=Msa0264050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
