AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1455660


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1455660 MtrunA17_Chr1g0209861 96.330 436 16 0 1 436 1 436 0.0 872
Msa1455660 MtrunA17_Chr8g0390971 41.372 452 188 18 9 433 11 412 2.67e-82 259
Msa1455660 MtrunA17_Chr5g0431351 44.144 111 42 3 316 424 124 216 4.72e-19 85.5
Msa1455660 MtrunA17_Chr7g0226451 40.152 132 56 4 316 424 220 351 4.58e-17 82.4
Msa1455660 MtrunA17_Chr4g0071811 46.154 104 44 4 321 424 293 384 5.21e-17 82.4
Msa1455660 MtrunA17_Chr1g0150471 47.561 82 36 2 351 427 221 300 1.97e-12 67.8
Msa1455660 MtrunA17_Chr3g0136701 63.636 55 16 1 370 424 224 274 3.65e-12 66.6
Msa1455660 MtrunA17_Chr7g0220721 69.767 43 13 0 382 424 327 369 7.73e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1455660 AT1G25440.1 45.622 434 188 10 6 424 3 403 7.23e-103 312
Msa1455660 AT1G68520.1 44.018 443 188 16 6 429 3 404 3.08e-91 282
Msa1455660 AT1G73870.1 38.149 443 190 19 8 427 9 390 4.02e-65 214
Msa1455660 AT4G25990.1 49.533 107 38 3 318 424 293 383 8.99e-22 97.1
Msa1455660 AT5G57180.2 45.217 115 43 3 318 431 337 432 2.66e-21 96.3
Msa1455660 AT1G49130.1 40.164 122 65 3 15 128 23 144 2.88e-19 89.0
Msa1455660 AT1G49130.1 45.794 107 37 3 319 425 236 321 7.29e-17 81.6
Msa1455660 AT1G49130.2 40.164 122 65 3 15 128 16 137 3.01e-19 88.6
Msa1455660 AT1G49130.2 45.794 107 37 3 319 425 229 314 9.55e-17 81.3
Msa1455660 AT4G25990.2 43.443 122 38 4 318 424 293 398 2.83e-18 87.0
Msa1455660 AT5G14370.1 38.028 142 73 4 291 424 202 336 5.08e-18 85.5
Msa1455660 AT4G25990.3 47.525 101 37 3 318 418 293 377 5.11e-18 85.9
Msa1455660 AT1G07050.1 43.750 128 45 5 303 426 91 195 2.02e-17 80.9
Msa1455660 AT5G57180.1 45.098 102 36 3 318 418 337 419 8.05e-17 82.4
Msa1455660 AT1G07050.2 41.667 120 43 5 303 418 91 187 5.02e-13 68.2
Msa1455660 AT5G24930.1 52.113 71 28 1 360 424 267 337 1.28e-11 66.2
Msa1455660 AT5G15840.1 52.308 65 28 2 1 62 41 105 8.45e-11 63.9

Find 106 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGGTGTTCTTGCCTTCT+TGG 0.140899 tig0036419:-3706 None:intergenic
GAAGAATTCATCACCATTAA+TGG 0.149936 tig0036419:-3658 None:intergenic
ACAAATCTCCCTTTCATTCT+TGG 0.172964 tig0036419:-5076 None:intergenic
ATTATTTATCAGGGAACTTT+TGG 0.202916 tig0036419:+4884 Msa1455660:intron
TGAAAATAATGATTATAATA+AGG 0.203891 tig0036419:+4364 Msa1455660:CDS
TGAACTTTGAAATATGAATT+TGG 0.207298 tig0036419:-3380 None:intergenic
TTCTCATCAGCATCCAAATT+TGG 0.222169 tig0036419:-4476 None:intergenic
ATTTGCTAAAAGTAATAATT+TGG 0.227746 tig0036419:+5196 Msa1455660:three_prime_UTR
TTTCATCTTGTGCCGGATTT+AGG 0.234999 tig0036419:+3795 Msa1455660:CDS
TGGTTTGAGTGAAACTTTAT+TGG 0.235328 tig0036419:+5287 Msa1455660:three_prime_UTR
TTGTTAACACCTGACAAATT+AGG 0.244804 tig0036419:-3344 None:intergenic
TATGGTGAGTTTGGTGGATA+TGG 0.250845 tig0036419:+4926 Msa1455660:CDS
ATGAAGCGCAACTTCTTTAC+AGG 0.254107 tig0036419:+3853 Msa1455660:CDS
TAATGGTGACAAGCCAAATT+TGG 0.271510 tig0036419:+4463 Msa1455660:CDS
CTGCCTCCATCTACCGTTAC+TGG 0.277791 tig0036419:-4956 None:intergenic
GAAAATAATGATTATAATAA+GGG 0.279237 tig0036419:+4365 Msa1455660:CDS
GCGTCGTACAAGTCCATTAA+TGG 0.290118 tig0036419:+3645 Msa1455660:CDS
ACGGAGGTTCATTATGCTTA+TGG 0.290853 tig0036419:+4908 Msa1455660:CDS
CTCAACATCAGCTGCAAATT+CGG 0.302034 tig0036419:-4087 None:intergenic
GCAACAGAAGGATCGAAAAT+TGG 0.331767 tig0036419:-3879 None:intergenic
CATTATGCTTATGGTGAGTT+TGG 0.336402 tig0036419:+4917 Msa1455660:CDS
TTCTTGGTGAAGCCAGAAAA+AGG 0.344434 tig0036419:-3690 None:intergenic
GGTTGTTCTCAAAGAAAATA+AGG 0.347288 tig0036419:+5020 Msa1455660:CDS
TTCCCTTCACCTAATTTGTC+AGG 0.352541 tig0036419:+3335 Msa1455660:five_prime_UTR
GATTAGAAAATGAGTGTATA+GGG 0.361641 tig0036419:+4126 Msa1455660:CDS
CATTAGTCCAGGGACACTTT+TGG 0.361781 tig0036419:-4445 None:intergenic
AGCTGATGTTGAGAGCTTAT+TGG 0.374691 tig0036419:+4097 Msa1455660:CDS
AGAAAATAAGGTACGAGGTT+AGG 0.382846 tig0036419:+5032 Msa1455660:CDS
GGATTAGAAAATGAGTGTAT+AGG 0.385257 tig0036419:+4125 Msa1455660:CDS
GCTGATGTTGAGAGCTTATT+GGG 0.387062 tig0036419:+4098 Msa1455660:CDS
CAAAAGTGTCCCTGGACTAA+TGG 0.395385 tig0036419:+4446 Msa1455660:CDS
ATTCCTCGCTGGTTCGCTGC+TGG 0.398768 tig0036419:-3757 None:intergenic
TGTCATCCAGTAACGGTAGA+TGG 0.408098 tig0036419:+4950 Msa1455660:CDS
CTCTCATTGTATTTAACATC+AGG 0.418189 tig0036419:-3981 None:intergenic
GGAGATAATATGATGGAGAT+TGG 0.419606 tig0036419:+4254 Msa1455660:CDS
GAAGGCAAGAACACCAAGAC+AGG 0.424009 tig0036419:+3710 Msa1455660:CDS
TAGGGAGAGGAAAAGGGAAA+AGG 0.427942 tig0036419:-3301 None:intergenic
GCAGAGAGGCAAGGGTTTCA+AGG 0.431755 tig0036419:+4975 Msa1455660:CDS
TGTATAGGGATGGAAGAGTT+GGG 0.440723 tig0036419:+4140 Msa1455660:CDS
ATAAATTATACCATGCAATC+AGG 0.445629 tig0036419:-4503 None:intergenic
GATTTGTGTTTCCCCTGTCT+TGG 0.455579 tig0036419:-3723 None:intergenic
TGAAAGGGAGATTTGTGAAG+AGG 0.460030 tig0036419:+5083 Msa1455660:CDS
ATTTGGATGCTGATGAGAAC+TGG 0.465263 tig0036419:+4480 Msa1455660:CDS
GTGTATAGGGATGGAAGAGT+TGG 0.474392 tig0036419:+4139 Msa1455660:CDS
TGGCTTGTCACCATTAGTCC+AGG 0.479305 tig0036419:-4456 None:intergenic
AAATCCGGCACAAGATGAAA+CGG 0.483022 tig0036419:-3792 None:intergenic
AGTGAGAAGTGGAAGTGTAG+TGG 0.486251 tig0036419:+4188 Msa1455660:CDS
CCTTCAGTTGGTTCAACTGA+AGG 0.490709 tig0036419:+3921 Msa1455660:CDS
GTTGAGAGCTTATTGGGTAG+GGG 0.493508 tig0036419:+4104 Msa1455660:CDS
TGTACTAGTCCTCCTTCAGT+TGG 0.493939 tig0036419:+3909 Msa1455660:CDS
CTGTTGGAGGCAAAACTGCT+AGG 0.494037 tig0036419:+3484 Msa1455660:CDS
AGTGGAAAGGTGAAGGAAGA+AGG 0.494618 tig0036419:+4206 Msa1455660:CDS
TGTTGAGAGCTTATTGGGTA+GGG 0.498854 tig0036419:+4103 Msa1455660:CDS
TATGCTTATGGTGAGTTTGG+TGG 0.509644 tig0036419:+4920 Msa1455660:CDS
AGAGAGCTATGAAATTGTTG+AGG 0.512413 tig0036419:+4232 Msa1455660:CDS
AGATGGAGGCAGAGAGGCAA+GGG 0.513332 tig0036419:+4967 Msa1455660:CDS
GAAAGGGAGATTTGTGAAGA+GGG 0.514753 tig0036419:+5084 Msa1455660:CDS
GAGAAGAGACCAAGAATGAA+AGG 0.514881 tig0036419:+5067 Msa1455660:CDS
ATATTATTATTATTCCTCGC+TGG 0.519712 tig0036419:-3768 None:intergenic
GAGAGCTATGAAATTGTTGA+GGG 0.520749 tig0036419:+4233 Msa1455660:CDS
GGGATAGCCAAAAGTGTCCC+TGG 0.521182 tig0036419:+4438 Msa1455660:CDS
AATCCGGCACAAGATGAAAC+GGG 0.522679 tig0036419:-3791 None:intergenic
ATGTTGAGAGCTTATTGGGT+AGG 0.523810 tig0036419:+4102 Msa1455660:CDS
GGTTCAACTGAAGGAGGACT+AGG 0.524616 tig0036419:+3930 Msa1455660:CDS
ACTTCATCGAAACCTAAATC+CGG 0.535576 tig0036419:-3807 None:intergenic
CACCTGACAAATTAGGTGAA+GGG 0.550785 tig0036419:-3337 None:intergenic
TGAAACACTTGAAGAGGTGA+AGG 0.552820 tig0036419:+4322 Msa1455660:CDS
AACGTAGCAAACGCTGTTGG+AGG 0.555203 tig0036419:+3471 Msa1455660:CDS
GAAGAGGTGAAGGAGAAGTG+TGG 0.556028 tig0036419:+4332 Msa1455660:CDS
CCTCGCTGGTTCGCTGCTGG+AGG 0.557584 tig0036419:-3754 None:intergenic
TTCTCATGAAACACTTGAAG+AGG 0.559028 tig0036419:+4316 Msa1455660:CDS
ATGATGCAGTAATCATTGCA+TGG 0.567325 tig0036419:+4417 Msa1455660:CDS
TCGGCTAATTCAATATCAGA+TGG 0.569236 tig0036419:-4068 None:intergenic
AGAAGAGACCAAGAATGAAA+GGG 0.570209 tig0036419:+5068 Msa1455660:CDS
GAAGTGTAGTGGAAAGGTGA+AGG 0.573136 tig0036419:+4199 Msa1455660:CDS
TGATGCAGTAATCATTGCAT+GGG 0.576146 tig0036419:+4418 Msa1455660:CDS
AGCATGAGGAGAGTGAGAAG+TGG 0.578354 tig0036419:+4177 Msa1455660:CDS
TAGATGGAGGCAGAGAGGCA+AGG 0.578587 tig0036419:+4966 Msa1455660:CDS
GGCTTGTCACCATTAGTCCA+GGG 0.579867 tig0036419:-4455 None:intergenic
TGTTGAGGGAGATAATATGA+TGG 0.580179 tig0036419:+4247 Msa1455660:CDS
AAAATAATGATTATAATAAG+GGG 0.580910 tig0036419:+4366 Msa1455660:CDS
TGTTGGAGGCAAAACTGCTA+GGG 0.581207 tig0036419:+3485 Msa1455660:CDS
TATCCCGTTTCATCTTGTGC+CGG 0.584262 tig0036419:+3788 Msa1455660:CDS
TCAGTTGGTTCAACTGAAGG+AGG 0.585447 tig0036419:+3924 Msa1455660:CDS
ACACCTGACAAATTAGGTGA+AGG 0.585651 tig0036419:-3338 None:intergenic
AGAAAATGAGTGTATAGGGA+TGG 0.586862 tig0036419:+4130 Msa1455660:CDS
GGTGATGAATTCTTCAATTG+TGG 0.591451 tig0036419:+3666 Msa1455660:CDS
AGGAAATGTTGGAACTGCAA+AGG 0.601959 tig0036419:-5110 None:intergenic
CCTTCAGTTGAACCAACTGA+AGG 0.603328 tig0036419:-3921 None:intergenic
TGAGAACTGGCCTGATTGCA+TGG 0.605682 tig0036419:+4493 Msa1455660:CDS
TCAGTTGAACCAACTGAAGG+AGG 0.611596 tig0036419:-3918 None:intergenic
ATTGATTGATACAAAGCATG+AGG 0.625826 tig0036419:+4163 Msa1455660:CDS
TAGTGATAATAATTATGAGA+TGG 0.628845 tig0036419:+4025 Msa1455660:CDS
TGAAGCGCAACTTCTTTACA+GGG 0.630911 tig0036419:+3854 Msa1455660:CDS
GTACATAATTCAGCAACAGA+AGG 0.631423 tig0036419:-3891 None:intergenic
CTCAAAGAAAATAAGGTACG+AGG 0.632554 tig0036419:+5027 Msa1455660:CDS
AACGGTAGATGGAGGCAGAG+AGG 0.643178 tig0036419:+4961 Msa1455660:CDS
ACAGAGAAAAGCGAAGAACA+AGG 0.643427 tig0036419:+4999 Msa1455660:CDS
AGGCAAGAACACCAAGACAG+GGG 0.648532 tig0036419:+3712 Msa1455660:CDS
GAAGTGGAAGTGTAGTGGAA+AGG 0.652932 tig0036419:+4193 Msa1455660:CDS
AAGGCAAGAACACCAAGACA+GGG 0.653824 tig0036419:+3711 Msa1455660:CDS
ATATGGATGTCATCCAGTAA+CGG 0.662808 tig0036419:+4943 Msa1455660:CDS
AACTGAAGGAGGACTAGGAG+CGG 0.667542 tig0036419:+3935 Msa1455660:CDS
CATCCAGTAACGGTAGATGG+AGG 0.676181 tig0036419:+4953 Msa1455660:CDS
CCTCCAGCAGCGAACCAGCG+AGG 0.699815 tig0036419:+3754 Msa1455660:CDS
GCATAACAAAGAGAGCACGT+TGG 0.777160 tig0036419:+3520 Msa1455660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAAATAATGATTATAATA+AGG + tig0036419:4364-4383 Msa1455660:CDS 10.0%
!! GAAAATAATGATTATAATAA+GGG + tig0036419:4365-4384 Msa1455660:CDS 10.0%
!! AAAATAATGATTATAATAAG+GGG + tig0036419:4366-4385 Msa1455660:CDS 10.0%
!! AAAATATCTAAATGTATATT+TGG - tig0036419:4653-4672 None:intergenic 10.0%
!! TGAAAATAATGATTATAATA+AGG + tig0036419:4364-4383 Msa1455660:CDS 10.0%
!! GAAAATAATGATTATAATAA+GGG + tig0036419:4365-4384 Msa1455660:CDS 10.0%
!! AAAATAATGATTATAATAAG+GGG + tig0036419:4366-4385 Msa1455660:CDS 10.0%
!! AAAATATCTAAATGTATATT+TGG - tig0036419:4653-4672 None:intergenic 10.0%
!!! TATATCTTAATTTTTCTTCA+TGG + tig0036419:4523-4542 Msa1455660:intron 15.0%
!!! CTTTCTATCAAATTTTATAA+AGG + tig0036419:4821-4840 Msa1455660:intron 15.0%
!! AATACTAACAAAAAAGATTA+GGG - tig0036419:5179-5198 None:intergenic 15.0%
!! AAATACTAACAAAAAAGATT+AGG - tig0036419:5180-5199 None:intergenic 15.0%
!!! ATTTGCTAAAAGTAATAATT+TGG + tig0036419:5196-5215 Msa1455660:three_prime_UTR 15.0%
!!! AACTTTTATATATACAAAGT+GGG - tig0036419:5258-5277 None:intergenic 15.0%
!!! AAACTTTTATATATACAAAG+TGG - tig0036419:5259-5278 None:intergenic 15.0%
!!! TATATCTTAATTTTTCTTCA+TGG + tig0036419:4523-4542 Msa1455660:intron 15.0%
!!! CTTTCTATCAAATTTTATAA+AGG + tig0036419:4821-4840 Msa1455660:intron 15.0%
!! AATACTAACAAAAAAGATTA+GGG - tig0036419:5179-5198 None:intergenic 15.0%
!! AAATACTAACAAAAAAGATT+AGG - tig0036419:5180-5199 None:intergenic 15.0%
!!! ATTTGCTAAAAGTAATAATT+TGG + tig0036419:5196-5215 Msa1455660:three_prime_UTR 15.0%
!!! AACTTTTATATATACAAAGT+GGG - tig0036419:5258-5277 None:intergenic 15.0%
!!! AAACTTTTATATATACAAAG+TGG - tig0036419:5259-5278 None:intergenic 15.0%
!!! AAGGGAATACAATTATTTTA+GGG - tig0036419:3322-3341 None:intergenic 20.0%
!!! TGAACTTTGAAATATGAATT+TGG - tig0036419:3383-3402 None:intergenic 20.0%
!! TAGTGATAATAATTATGAGA+TGG + tig0036419:4025-4044 Msa1455660:CDS 20.0%
!! TTTACTGTTAGATTAATCAT+TGG + tig0036419:4788-4807 Msa1455660:intron 20.0%
!! ATTTGATAGAAAGAAAAAAG+TGG - tig0036419:4814-4833 None:intergenic 20.0%
!! ATACTAACAAAAAAGATTAG+GGG - tig0036419:5178-5197 None:intergenic 20.0%
!!! ATATAAAAGTTTTGTGCAAT+TGG + tig0036419:5267-5286 Msa1455660:three_prime_UTR 20.0%
!!! AAGGGAATACAATTATTTTA+GGG - tig0036419:3322-3341 None:intergenic 20.0%
!!! TGAACTTTGAAATATGAATT+TGG - tig0036419:3383-3402 None:intergenic 20.0%
!! TAGTGATAATAATTATGAGA+TGG + tig0036419:4025-4044 Msa1455660:CDS 20.0%
!! TTTACTGTTAGATTAATCAT+TGG + tig0036419:4788-4807 Msa1455660:intron 20.0%
!! ATTTGATAGAAAGAAAAAAG+TGG - tig0036419:4814-4833 None:intergenic 20.0%
!! ATACTAACAAAAAAGATTAG+GGG - tig0036419:5178-5197 None:intergenic 20.0%
!!! ATATAAAAGTTTTGTGCAAT+TGG + tig0036419:5267-5286 Msa1455660:three_prime_UTR 20.0%
!!! AATACAATTATTTTAGGGAG+AGG - tig0036419:3317-3336 None:intergenic 25.0%
!! GAAGGGAATACAATTATTTT+AGG - tig0036419:3323-3342 None:intergenic 25.0%
! ATATTATTATTATTCCTCGC+TGG - tig0036419:3771-3790 None:intergenic 25.0%
! GATTAGAAAATGAGTGTATA+GGG + tig0036419:4126-4145 Msa1455660:CDS 25.0%
! ATAAATTATACCATGCAATC+AGG - tig0036419:4506-4525 None:intergenic 25.0%
! GATACCAATCATTAACTAAA+GGG - tig0036419:4574-4593 None:intergenic 25.0%
! TGATACCAATCATTAACTAA+AGG - tig0036419:4575-4594 None:intergenic 25.0%
!! ATTATTTATCAGGGAACTTT+TGG + tig0036419:4884-4903 Msa1455660:intron 25.0%
!!! TATTTTAGCAAAGGAAATGT+TGG - tig0036419:5124-5143 None:intergenic 25.0%
!!! GCTCTTATTTATTTTAGCAA+AGG - tig0036419:5133-5152 None:intergenic 25.0%
!!! AATACAATTATTTTAGGGAG+AGG - tig0036419:3317-3336 None:intergenic 25.0%
!! GAAGGGAATACAATTATTTT+AGG - tig0036419:3323-3342 None:intergenic 25.0%
! ATATTATTATTATTCCTCGC+TGG - tig0036419:3771-3790 None:intergenic 25.0%
! GATTAGAAAATGAGTGTATA+GGG + tig0036419:4126-4145 Msa1455660:CDS 25.0%
! ATAAATTATACCATGCAATC+AGG - tig0036419:4506-4525 None:intergenic 25.0%
! GATACCAATCATTAACTAAA+GGG - tig0036419:4574-4593 None:intergenic 25.0%
! TGATACCAATCATTAACTAA+AGG - tig0036419:4575-4594 None:intergenic 25.0%
!! ATTATTTATCAGGGAACTTT+TGG + tig0036419:4884-4903 Msa1455660:intron 25.0%
!!! TATTTTAGCAAAGGAAATGT+TGG - tig0036419:5124-5143 None:intergenic 25.0%
!!! GCTCTTATTTATTTTAGCAA+AGG - tig0036419:5133-5152 None:intergenic 25.0%
!!! TTATTTTAGGGAGAGGAAAA+GGG - tig0036419:3310-3329 None:intergenic 30.0%
!!! ATTATTTTAGGGAGAGGAAA+AGG - tig0036419:3311-3330 None:intergenic 30.0%
TTGTTAACACCTGACAAATT+AGG - tig0036419:3347-3366 None:intergenic 30.0%
!!! TTGAAGCTATACGTGTTTTT+TGG - tig0036419:3408-3427 None:intergenic 30.0%
GAAGAATTCATCACCATTAA+TGG - tig0036419:3661-3680 None:intergenic 30.0%
CTCTCATTGTATTTAACATC+AGG - tig0036419:3984-4003 None:intergenic 30.0%
GGATTAGAAAATGAGTGTAT+AGG + tig0036419:4125-4144 Msa1455660:CDS 30.0%
ATTGATTGATACAAAGCATG+AGG + tig0036419:4163-4182 Msa1455660:CDS 30.0%
CAATCCCTTTAGTTAATGAT+TGG + tig0036419:4567-4586 Msa1455660:intron 30.0%
GGTTGTTCTCAAAGAAAATA+AGG + tig0036419:5020-5039 Msa1455660:CDS 30.0%
TGGTTTGAGTGAAACTTTAT+TGG + tig0036419:5287-5306 Msa1455660:three_prime_UTR 30.0%
!!! TTATTTTAGGGAGAGGAAAA+GGG - tig0036419:3310-3329 None:intergenic 30.0%
!!! ATTATTTTAGGGAGAGGAAA+AGG - tig0036419:3311-3330 None:intergenic 30.0%
TTGTTAACACCTGACAAATT+AGG - tig0036419:3347-3366 None:intergenic 30.0%
!!! TTGAAGCTATACGTGTTTTT+TGG - tig0036419:3408-3427 None:intergenic 30.0%
GAAGAATTCATCACCATTAA+TGG - tig0036419:3661-3680 None:intergenic 30.0%
CTCTCATTGTATTTAACATC+AGG - tig0036419:3984-4003 None:intergenic 30.0%
GGATTAGAAAATGAGTGTAT+AGG + tig0036419:4125-4144 Msa1455660:CDS 30.0%
ATTGATTGATACAAAGCATG+AGG + tig0036419:4163-4182 Msa1455660:CDS 30.0%
CAATCCCTTTAGTTAATGAT+TGG + tig0036419:4567-4586 Msa1455660:intron 30.0%
GGTTGTTCTCAAAGAAAATA+AGG + tig0036419:5020-5039 Msa1455660:CDS 30.0%
TGGTTTGAGTGAAACTTTAT+TGG + tig0036419:5287-5306 Msa1455660:three_prime_UTR 30.0%
GGTGATGAATTCTTCAATTG+TGG + tig0036419:3666-3685 Msa1455660:CDS 35.0%
! TTCAATTGTGGTCCTTTTTC+TGG + tig0036419:3678-3697 Msa1455660:CDS 35.0%
ACTTCATCGAAACCTAAATC+CGG - tig0036419:3810-3829 None:intergenic 35.0%
GTACATAATTCAGCAACAGA+AGG - tig0036419:3894-3913 None:intergenic 35.0%
TCGGCTAATTCAATATCAGA+TGG - tig0036419:4071-4090 None:intergenic 35.0%
AGAAAATGAGTGTATAGGGA+TGG + tig0036419:4130-4149 Msa1455660:CDS 35.0%
AGAGAGCTATGAAATTGTTG+AGG + tig0036419:4232-4251 Msa1455660:CDS 35.0%
GAGAGCTATGAAATTGTTGA+GGG + tig0036419:4233-4252 Msa1455660:CDS 35.0%
TGTTGAGGGAGATAATATGA+TGG + tig0036419:4247-4266 Msa1455660:CDS 35.0%
! GGAGATAATATGATGGAGAT+TGG + tig0036419:4254-4273 Msa1455660:CDS 35.0%
TTCTCATGAAACACTTGAAG+AGG + tig0036419:4316-4335 Msa1455660:CDS 35.0%
ATGATGCAGTAATCATTGCA+TGG + tig0036419:4417-4436 Msa1455660:CDS 35.0%
TGATGCAGTAATCATTGCAT+GGG + tig0036419:4418-4437 Msa1455660:CDS 35.0%
TAATGGTGACAAGCCAAATT+TGG + tig0036419:4463-4482 Msa1455660:CDS 35.0%
TTCTCATCAGCATCCAAATT+TGG - tig0036419:4479-4498 None:intergenic 35.0%
CATGAGTGTGTCAAAAATCA+CGG - tig0036419:4624-4643 None:intergenic 35.0%
ACAGTAAAAAAGTGAACAGC+AGG - tig0036419:4776-4795 None:intergenic 35.0%
!! TTATCAGGGAACTTTTGGAA+CGG + tig0036419:4889-4908 Msa1455660:intron 35.0%
CATTATGCTTATGGTGAGTT+TGG + tig0036419:4917-4936 Msa1455660:CDS 35.0%
ATATGGATGTCATCCAGTAA+CGG + tig0036419:4943-4962 Msa1455660:CDS 35.0%
CTCAAAGAAAATAAGGTACG+AGG + tig0036419:5027-5046 Msa1455660:CDS 35.0%
AGAAAATAAGGTACGAGGTT+AGG + tig0036419:5032-5051 Msa1455660:CDS 35.0%
AGAAGAGACCAAGAATGAAA+GGG + tig0036419:5068-5087 Msa1455660:CDS 35.0%
ACAAATCTCCCTTTCATTCT+TGG - tig0036419:5079-5098 None:intergenic 35.0%
GGTGATGAATTCTTCAATTG+TGG + tig0036419:3666-3685 Msa1455660:CDS 35.0%
! TTCAATTGTGGTCCTTTTTC+TGG + tig0036419:3678-3697 Msa1455660:CDS 35.0%
ACTTCATCGAAACCTAAATC+CGG - tig0036419:3810-3829 None:intergenic 35.0%
GTACATAATTCAGCAACAGA+AGG - tig0036419:3894-3913 None:intergenic 35.0%
TCGGCTAATTCAATATCAGA+TGG - tig0036419:4071-4090 None:intergenic 35.0%
AGAAAATGAGTGTATAGGGA+TGG + tig0036419:4130-4149 Msa1455660:CDS 35.0%
AGAGAGCTATGAAATTGTTG+AGG + tig0036419:4232-4251 Msa1455660:CDS 35.0%
GAGAGCTATGAAATTGTTGA+GGG + tig0036419:4233-4252 Msa1455660:CDS 35.0%
TGTTGAGGGAGATAATATGA+TGG + tig0036419:4247-4266 Msa1455660:CDS 35.0%
! GGAGATAATATGATGGAGAT+TGG + tig0036419:4254-4273 Msa1455660:CDS 35.0%
TTCTCATGAAACACTTGAAG+AGG + tig0036419:4316-4335 Msa1455660:CDS 35.0%
ATGATGCAGTAATCATTGCA+TGG + tig0036419:4417-4436 Msa1455660:CDS 35.0%
TGATGCAGTAATCATTGCAT+GGG + tig0036419:4418-4437 Msa1455660:CDS 35.0%
TAATGGTGACAAGCCAAATT+TGG + tig0036419:4463-4482 Msa1455660:CDS 35.0%
TTCTCATCAGCATCCAAATT+TGG - tig0036419:4479-4498 None:intergenic 35.0%
CATGAGTGTGTCAAAAATCA+CGG - tig0036419:4624-4643 None:intergenic 35.0%
ACAGTAAAAAAGTGAACAGC+AGG - tig0036419:4776-4795 None:intergenic 35.0%
!! TTATCAGGGAACTTTTGGAA+CGG + tig0036419:4889-4908 Msa1455660:intron 35.0%
CATTATGCTTATGGTGAGTT+TGG + tig0036419:4917-4936 Msa1455660:CDS 35.0%
ATATGGATGTCATCCAGTAA+CGG + tig0036419:4943-4962 Msa1455660:CDS 35.0%
CTCAAAGAAAATAAGGTACG+AGG + tig0036419:5027-5046 Msa1455660:CDS 35.0%
AGAAAATAAGGTACGAGGTT+AGG + tig0036419:5032-5051 Msa1455660:CDS 35.0%
AGAAGAGACCAAGAATGAAA+GGG + tig0036419:5068-5087 Msa1455660:CDS 35.0%
ACAAATCTCCCTTTCATTCT+TGG - tig0036419:5079-5098 None:intergenic 35.0%
! TTCCCTTCACCTAATTTGTC+AGG + tig0036419:3335-3354 Msa1455660:five_prime_UTR 40.0%
CACCTGACAAATTAGGTGAA+GGG - tig0036419:3340-3359 None:intergenic 40.0%
ACACCTGACAAATTAGGTGA+AGG - tig0036419:3341-3360 None:intergenic 40.0%
AAAAACGTAGCAAACGCTGT+TGG + tig0036419:3468-3487 Msa1455660:CDS 40.0%
TTCTTGGTGAAGCCAGAAAA+AGG - tig0036419:3693-3712 None:intergenic 40.0%
!!! TTTTTCTGGCTTCACCAAGA+AGG + tig0036419:3692-3711 Msa1455660:CDS 40.0%
AAATCCGGCACAAGATGAAA+CGG - tig0036419:3795-3814 None:intergenic 40.0%
TTTCATCTTGTGCCGGATTT+AGG + tig0036419:3795-3814 Msa1455660:CDS 40.0%
ATGAAGCGCAACTTCTTTAC+AGG + tig0036419:3853-3872 Msa1455660:CDS 40.0%
TGAAGCGCAACTTCTTTACA+GGG + tig0036419:3854-3873 Msa1455660:CDS 40.0%
GCAACAGAAGGATCGAAAAT+TGG - tig0036419:3882-3901 None:intergenic 40.0%
CTCAACATCAGCTGCAAATT+CGG - tig0036419:4090-4109 None:intergenic 40.0%
AGCTGATGTTGAGAGCTTAT+TGG + tig0036419:4097-4116 Msa1455660:CDS 40.0%
GCTGATGTTGAGAGCTTATT+GGG + tig0036419:4098-4117 Msa1455660:CDS 40.0%
ATGTTGAGAGCTTATTGGGT+AGG + tig0036419:4102-4121 Msa1455660:CDS 40.0%
TGTTGAGAGCTTATTGGGTA+GGG + tig0036419:4103-4122 Msa1455660:CDS 40.0%
TGTATAGGGATGGAAGAGTT+GGG + tig0036419:4140-4159 Msa1455660:CDS 40.0%
TGAAACACTTGAAGAGGTGA+AGG + tig0036419:4322-4341 Msa1455660:CDS 40.0%
ATTTGGATGCTGATGAGAAC+TGG + tig0036419:4480-4499 Msa1455660:CDS 40.0%
! CGTGATTTTTGACACACTCA+TGG + tig0036419:4622-4641 Msa1455660:intron 40.0%
CTTTACAACACTTGCACACA+CGG + tig0036419:4727-4746 Msa1455660:intron 40.0%
ACGGAGGTTCATTATGCTTA+TGG + tig0036419:4908-4927 Msa1455660:CDS 40.0%
TATGCTTATGGTGAGTTTGG+TGG + tig0036419:4920-4939 Msa1455660:CDS 40.0%
! TATGGTGAGTTTGGTGGATA+TGG + tig0036419:4926-4945 Msa1455660:CDS 40.0%
ACAGAGAAAAGCGAAGAACA+AGG + tig0036419:4999-5018 Msa1455660:CDS 40.0%
GAGAAGAGACCAAGAATGAA+AGG + tig0036419:5067-5086 Msa1455660:CDS 40.0%
TGAAAGGGAGATTTGTGAAG+AGG + tig0036419:5083-5102 Msa1455660:CDS 40.0%
GAAAGGGAGATTTGTGAAGA+GGG + tig0036419:5084-5103 Msa1455660:CDS 40.0%
AGGAAATGTTGGAACTGCAA+AGG - tig0036419:5113-5132 None:intergenic 40.0%
! TTCCCTTCACCTAATTTGTC+AGG + tig0036419:3335-3354 Msa1455660:five_prime_UTR 40.0%
CACCTGACAAATTAGGTGAA+GGG - tig0036419:3340-3359 None:intergenic 40.0%
ACACCTGACAAATTAGGTGA+AGG - tig0036419:3341-3360 None:intergenic 40.0%
AAAAACGTAGCAAACGCTGT+TGG + tig0036419:3468-3487 Msa1455660:CDS 40.0%
TTCTTGGTGAAGCCAGAAAA+AGG - tig0036419:3693-3712 None:intergenic 40.0%
!!! TTTTTCTGGCTTCACCAAGA+AGG + tig0036419:3692-3711 Msa1455660:CDS 40.0%
AAATCCGGCACAAGATGAAA+CGG - tig0036419:3795-3814 None:intergenic 40.0%
TTTCATCTTGTGCCGGATTT+AGG + tig0036419:3795-3814 Msa1455660:CDS 40.0%
ATGAAGCGCAACTTCTTTAC+AGG + tig0036419:3853-3872 Msa1455660:CDS 40.0%
TGAAGCGCAACTTCTTTACA+GGG + tig0036419:3854-3873 Msa1455660:CDS 40.0%
GCAACAGAAGGATCGAAAAT+TGG - tig0036419:3882-3901 None:intergenic 40.0%
CTCAACATCAGCTGCAAATT+CGG - tig0036419:4090-4109 None:intergenic 40.0%
AGCTGATGTTGAGAGCTTAT+TGG + tig0036419:4097-4116 Msa1455660:CDS 40.0%
GCTGATGTTGAGAGCTTATT+GGG + tig0036419:4098-4117 Msa1455660:CDS 40.0%
ATGTTGAGAGCTTATTGGGT+AGG + tig0036419:4102-4121 Msa1455660:CDS 40.0%
TGTTGAGAGCTTATTGGGTA+GGG + tig0036419:4103-4122 Msa1455660:CDS 40.0%
TGTATAGGGATGGAAGAGTT+GGG + tig0036419:4140-4159 Msa1455660:CDS 40.0%
TGAAACACTTGAAGAGGTGA+AGG + tig0036419:4322-4341 Msa1455660:CDS 40.0%
ATTTGGATGCTGATGAGAAC+TGG + tig0036419:4480-4499 Msa1455660:CDS 40.0%
! CGTGATTTTTGACACACTCA+TGG + tig0036419:4622-4641 Msa1455660:intron 40.0%
CTTTACAACACTTGCACACA+CGG + tig0036419:4727-4746 Msa1455660:intron 40.0%
ACGGAGGTTCATTATGCTTA+TGG + tig0036419:4908-4927 Msa1455660:CDS 40.0%
TATGCTTATGGTGAGTTTGG+TGG + tig0036419:4920-4939 Msa1455660:CDS 40.0%
! TATGGTGAGTTTGGTGGATA+TGG + tig0036419:4926-4945 Msa1455660:CDS 40.0%
ACAGAGAAAAGCGAAGAACA+AGG + tig0036419:4999-5018 Msa1455660:CDS 40.0%
GAGAAGAGACCAAGAATGAA+AGG + tig0036419:5067-5086 Msa1455660:CDS 40.0%
TGAAAGGGAGATTTGTGAAG+AGG + tig0036419:5083-5102 Msa1455660:CDS 40.0%
GAAAGGGAGATTTGTGAAGA+GGG + tig0036419:5084-5103 Msa1455660:CDS 40.0%
AGGAAATGTTGGAACTGCAA+AGG - tig0036419:5113-5132 None:intergenic 40.0%
TAGGGAGAGGAAAAGGGAAA+AGG - tig0036419:3304-3323 None:intergenic 45.0%
TGTTGGAGGCAAAACTGCTA+GGG + tig0036419:3485-3504 Msa1455660:CDS 45.0%
! GCATAACAAAGAGAGCACGT+TGG + tig0036419:3520-3539 Msa1455660:CDS 45.0%
GCGTCGTACAAGTCCATTAA+TGG + tig0036419:3645-3664 Msa1455660:CDS 45.0%
!! TCTTGGTGTTCTTGCCTTCT+TGG - tig0036419:3709-3728 None:intergenic 45.0%
AAGGCAAGAACACCAAGACA+GGG + tig0036419:3711-3730 Msa1455660:CDS 45.0%
GATTTGTGTTTCCCCTGTCT+TGG - tig0036419:3726-3745 None:intergenic 45.0%
TATCCCGTTTCATCTTGTGC+CGG + tig0036419:3788-3807 Msa1455660:CDS 45.0%
AATCCGGCACAAGATGAAAC+GGG - tig0036419:3794-3813 None:intergenic 45.0%
TGTACTAGTCCTCCTTCAGT+TGG + tig0036419:3909-3928 Msa1455660:CDS 45.0%
TCAGTTGAACCAACTGAAGG+AGG - tig0036419:3921-3940 None:intergenic 45.0%
CCTTCAGTTGAACCAACTGA+AGG - tig0036419:3924-3943 None:intergenic 45.0%
! CCTTCAGTTGGTTCAACTGA+AGG + tig0036419:3921-3940 Msa1455660:CDS 45.0%
! TCAGTTGGTTCAACTGAAGG+AGG + tig0036419:3924-3943 Msa1455660:CDS 45.0%
GTTGAGAGCTTATTGGGTAG+GGG + tig0036419:4104-4123 Msa1455660:CDS 45.0%
GTGTATAGGGATGGAAGAGT+TGG + tig0036419:4139-4158 Msa1455660:CDS 45.0%
! AGTGAGAAGTGGAAGTGTAG+TGG + tig0036419:4188-4207 Msa1455660:CDS 45.0%
! GAAGTGGAAGTGTAGTGGAA+AGG + tig0036419:4193-4212 Msa1455660:CDS 45.0%
! GAAGTGTAGTGGAAAGGTGA+AGG + tig0036419:4199-4218 Msa1455660:CDS 45.0%
AGTGGAAAGGTGAAGGAAGA+AGG + tig0036419:4206-4225 Msa1455660:CDS 45.0%
! CATTAGTCCAGGGACACTTT+TGG - tig0036419:4448-4467 None:intergenic 45.0%
!! CAAAAGTGTCCCTGGACTAA+TGG + tig0036419:4446-4465 Msa1455660:CDS 45.0%
GCAGGTCTAACACAAGTGAA+TGG - tig0036419:4758-4777 None:intergenic 45.0%
TGTCATCCAGTAACGGTAGA+TGG + tig0036419:4950-4969 Msa1455660:CDS 45.0%
TAGGGAGAGGAAAAGGGAAA+AGG - tig0036419:3304-3323 None:intergenic 45.0%
TGTTGGAGGCAAAACTGCTA+GGG + tig0036419:3485-3504 Msa1455660:CDS 45.0%
! GCATAACAAAGAGAGCACGT+TGG + tig0036419:3520-3539 Msa1455660:CDS 45.0%
GCGTCGTACAAGTCCATTAA+TGG + tig0036419:3645-3664 Msa1455660:CDS 45.0%
!! TCTTGGTGTTCTTGCCTTCT+TGG - tig0036419:3709-3728 None:intergenic 45.0%
AAGGCAAGAACACCAAGACA+GGG + tig0036419:3711-3730 Msa1455660:CDS 45.0%
GATTTGTGTTTCCCCTGTCT+TGG - tig0036419:3726-3745 None:intergenic 45.0%
TATCCCGTTTCATCTTGTGC+CGG + tig0036419:3788-3807 Msa1455660:CDS 45.0%
AATCCGGCACAAGATGAAAC+GGG - tig0036419:3794-3813 None:intergenic 45.0%
TGTACTAGTCCTCCTTCAGT+TGG + tig0036419:3909-3928 Msa1455660:CDS 45.0%
TCAGTTGAACCAACTGAAGG+AGG - tig0036419:3921-3940 None:intergenic 45.0%
CCTTCAGTTGAACCAACTGA+AGG - tig0036419:3924-3943 None:intergenic 45.0%
! CCTTCAGTTGGTTCAACTGA+AGG + tig0036419:3921-3940 Msa1455660:CDS 45.0%
! TCAGTTGGTTCAACTGAAGG+AGG + tig0036419:3924-3943 Msa1455660:CDS 45.0%
GTTGAGAGCTTATTGGGTAG+GGG + tig0036419:4104-4123 Msa1455660:CDS 45.0%
GTGTATAGGGATGGAAGAGT+TGG + tig0036419:4139-4158 Msa1455660:CDS 45.0%
! AGTGAGAAGTGGAAGTGTAG+TGG + tig0036419:4188-4207 Msa1455660:CDS 45.0%
! GAAGTGGAAGTGTAGTGGAA+AGG + tig0036419:4193-4212 Msa1455660:CDS 45.0%
! GAAGTGTAGTGGAAAGGTGA+AGG + tig0036419:4199-4218 Msa1455660:CDS 45.0%
AGTGGAAAGGTGAAGGAAGA+AGG + tig0036419:4206-4225 Msa1455660:CDS 45.0%
! CATTAGTCCAGGGACACTTT+TGG - tig0036419:4448-4467 None:intergenic 45.0%
!! CAAAAGTGTCCCTGGACTAA+TGG + tig0036419:4446-4465 Msa1455660:CDS 45.0%
GCAGGTCTAACACAAGTGAA+TGG - tig0036419:4758-4777 None:intergenic 45.0%
TGTCATCCAGTAACGGTAGA+TGG + tig0036419:4950-4969 Msa1455660:CDS 45.0%
!!! TTTTAATTTAATTATTTATC+AGG + tig0036419:4874-4893 Msa1455660:intron 5.0%
!!! TTTAATTTAATTATTTATCA+GGG + tig0036419:4875-4894 Msa1455660:intron 5.0%
!!! TTTTAATTTAATTATTTATC+AGG + tig0036419:4874-4893 Msa1455660:intron 5.0%
!!! TTTAATTTAATTATTTATCA+GGG + tig0036419:4875-4894 Msa1455660:intron 5.0%
AACGTAGCAAACGCTGTTGG+AGG + tig0036419:3471-3490 Msa1455660:CDS 50.0%
CTGTTGGAGGCAAAACTGCT+AGG + tig0036419:3484-3503 Msa1455660:CDS 50.0%
GAAGGCAAGAACACCAAGAC+AGG + tig0036419:3710-3729 Msa1455660:CDS 50.0%
AGGCAAGAACACCAAGACAG+GGG + tig0036419:3712-3731 Msa1455660:CDS 50.0%
GGTTCAACTGAAGGAGGACT+AGG + tig0036419:3930-3949 Msa1455660:CDS 50.0%
AACTGAAGGAGGACTAGGAG+CGG + tig0036419:3935-3954 Msa1455660:CDS 50.0%
AGCATGAGGAGAGTGAGAAG+TGG + tig0036419:4177-4196 Msa1455660:CDS 50.0%
GAAGAGGTGAAGGAGAAGTG+TGG + tig0036419:4332-4351 Msa1455660:CDS 50.0%
GGCTTGTCACCATTAGTCCA+GGG - tig0036419:4458-4477 None:intergenic 50.0%
! TGGCTTGTCACCATTAGTCC+AGG - tig0036419:4459-4478 None:intergenic 50.0%
! TGAGAACTGGCCTGATTGCA+TGG + tig0036419:4493-4512 Msa1455660:CDS 50.0%
!!! TCAGGGAACTTTTGGAACGG+AGG + tig0036419:4892-4911 Msa1455660:intron 50.0%
CATCCAGTAACGGTAGATGG+AGG + tig0036419:4953-4972 Msa1455660:CDS 50.0%
AACGTAGCAAACGCTGTTGG+AGG + tig0036419:3471-3490 Msa1455660:CDS 50.0%
CTGTTGGAGGCAAAACTGCT+AGG + tig0036419:3484-3503 Msa1455660:CDS 50.0%
GAAGGCAAGAACACCAAGAC+AGG + tig0036419:3710-3729 Msa1455660:CDS 50.0%
AGGCAAGAACACCAAGACAG+GGG + tig0036419:3712-3731 Msa1455660:CDS 50.0%
GGTTCAACTGAAGGAGGACT+AGG + tig0036419:3930-3949 Msa1455660:CDS 50.0%
AACTGAAGGAGGACTAGGAG+CGG + tig0036419:3935-3954 Msa1455660:CDS 50.0%
AGCATGAGGAGAGTGAGAAG+TGG + tig0036419:4177-4196 Msa1455660:CDS 50.0%
GAAGAGGTGAAGGAGAAGTG+TGG + tig0036419:4332-4351 Msa1455660:CDS 50.0%
GGCTTGTCACCATTAGTCCA+GGG - tig0036419:4458-4477 None:intergenic 50.0%
! TGGCTTGTCACCATTAGTCC+AGG - tig0036419:4459-4478 None:intergenic 50.0%
! TGAGAACTGGCCTGATTGCA+TGG + tig0036419:4493-4512 Msa1455660:CDS 50.0%
!!! TCAGGGAACTTTTGGAACGG+AGG + tig0036419:4892-4911 Msa1455660:intron 50.0%
CATCCAGTAACGGTAGATGG+AGG + tig0036419:4953-4972 Msa1455660:CDS 50.0%
!! GGGATAGCCAAAAGTGTCCC+TGG + tig0036419:4438-4457 Msa1455660:CDS 55.0%
CTGCCTCCATCTACCGTTAC+TGG - tig0036419:4959-4978 None:intergenic 55.0%
AACGGTAGATGGAGGCAGAG+AGG + tig0036419:4961-4980 Msa1455660:CDS 55.0%
TAGATGGAGGCAGAGAGGCA+AGG + tig0036419:4966-4985 Msa1455660:CDS 55.0%
AGATGGAGGCAGAGAGGCAA+GGG + tig0036419:4967-4986 Msa1455660:CDS 55.0%
GCAGAGAGGCAAGGGTTTCA+AGG + tig0036419:4975-4994 Msa1455660:CDS 55.0%
!! GGGATAGCCAAAAGTGTCCC+TGG + tig0036419:4438-4457 Msa1455660:CDS 55.0%
CTGCCTCCATCTACCGTTAC+TGG - tig0036419:4959-4978 None:intergenic 55.0%
AACGGTAGATGGAGGCAGAG+AGG + tig0036419:4961-4980 Msa1455660:CDS 55.0%
TAGATGGAGGCAGAGAGGCA+AGG + tig0036419:4966-4985 Msa1455660:CDS 55.0%
AGATGGAGGCAGAGAGGCAA+GGG + tig0036419:4967-4986 Msa1455660:CDS 55.0%
GCAGAGAGGCAAGGGTTTCA+AGG + tig0036419:4975-4994 Msa1455660:CDS 55.0%
!! ATTCCTCGCTGGTTCGCTGC+TGG - tig0036419:3760-3779 None:intergenic 60.0%
!! ATTCCTCGCTGGTTCGCTGC+TGG - tig0036419:3760-3779 None:intergenic 60.0%
!! CCTCGCTGGTTCGCTGCTGG+AGG - tig0036419:3757-3776 None:intergenic 70.0%
CCTCCAGCAGCGAACCAGCG+AGG + tig0036419:3754-3773 Msa1455660:CDS 70.0%
!! CCTCGCTGGTTCGCTGCTGG+AGG - tig0036419:3757-3776 None:intergenic 70.0%
CCTCCAGCAGCGAACCAGCG+AGG + tig0036419:3754-3773 Msa1455660:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0036419 gene 3299 5324 3299 ID=Msa1455660;Name=Msa1455660
tig0036419 mRNA 3299 5324 3299 ID=Msa1455660-mRNA-1;Parent=Msa1455660;Name=Msa1455660-mRNA-1;_AED=0.01;_eAED=0.01;_QI=154|1|1|1|1|1|2|180|436
tig0036419 exon 3299 4514 3299 ID=Msa1455660-mRNA-1:exon:20350;Parent=Msa1455660-mRNA-1
tig0036419 exon 4896 5324 4896 ID=Msa1455660-mRNA-1:exon:20351;Parent=Msa1455660-mRNA-1
tig0036419 five_prime_UTR 3299 3452 3299 ID=Msa1455660-mRNA-1:five_prime_utr;Parent=Msa1455660-mRNA-1
tig0036419 CDS 3453 4514 3453 ID=Msa1455660-mRNA-1:cds;Parent=Msa1455660-mRNA-1
tig0036419 CDS 4896 5144 4896 ID=Msa1455660-mRNA-1:cds;Parent=Msa1455660-mRNA-1
tig0036419 three_prime_UTR 5145 5324 5145 ID=Msa1455660-mRNA-1:three_prime_utr;Parent=Msa1455660-mRNA-1
Gene Sequence

>Msa1455660

ATGACTTGTTCTAGTAAAAACGTAGCAAACGCTGTTGGAGGCAAAACTGCTAGGGCTTGTGACAGTTGCATAACAAAGAGAGCACGTTGGTATTGTGCTGCTGATGATGCTTTTCTCTGTCAAGCTTGTGACTCTTCTGTTCATTCAGCTAATTCTTTAGCTCGAAGACATGAAAGAGTTCGTTTGAAAACAGCGTCGTACAAGTCCATTAATGGTGATGAATTCTTCAATTGTGGTCCTTTTTCTGGCTTCACCAAGAAGGCAAGAACACCAAGACAGGGGAAACACAAATCAAAATCATCCTCCAGCAGCGAACCAGCGAGGAATAATAATAATATCCCGTTTCATCTTGTGCCGGATTTAGGTTTCGATGAAGTTAATTCAAATTCACATGACGAAAATGAAGCGCAACTTCTTTACAGGGTACCAATTTTCGATCCTTCTGTTGCTGAATTATGTACTAGTCCTCCTTCAGTTGGTTCAACTGAAGGAGGACTAGGAGCGGTAGTTGTTGCTTCTGCTTTCGCTCCTGATGTTAAATACAATGAGAGTGAAAGCAGAGTTCAACTAGCTAGTGATAATAATTATGAGATGGAAAGCTTTCACGAGCTTCTTCCATCTGATATTGAATTAGCCGAATTTGCAGCTGATGTTGAGAGCTTATTGGGTAGGGGATTAGAAAATGAGTGTATAGGGATGGAAGAGTTGGGATTGATTGATACAAAGCATGAGGAGAGTGAGAAGTGGAAGTGTAGTGGAAAGGTGAAGGAAGAAGGTGAAGAGAGCTATGAAATTGTTGAGGGAGATAATATGATGGAGATTGGAAAAGAATCTTCATTTGAGTTGAATTTTGATTATGATGATTCTCATGAAACACTTGAAGAGGTGAAGGAGAAGTGTGGAGAACAAAATGAAAATAATGATTATAATAAGGGGAAAAGAAAAATATCTTTGCAGCTAGATTATGATGCAGTAATCATTGCATGGGATAGCCAAAAGTGTCCCTGGACTAATGGTGACAAGCCAAATTTGGATGCTGATGAGAACTGGCCTGATTGCATGGGAACTTTTGGAACGGAGGTTCATTATGCTTATGGTGAGTTTGGTGGATATGGATGTCATCCAGTAACGGTAGATGGAGGCAGAGAGGCAAGGGTTTCAAGGTACAGAGAAAAGCGAAGAACAAGGTTGTTCTCAAAGAAAATAAGGTACGAGGTTAGGAAATTGAATGCAGAGAAGAGACCAAGAATGAAAGGGAGATTTGTGAAGAGGGCTTCCTTTGCAGTTCCAACATTTCCTTTGCTAAAATAA

Protein sequence

>Msa1455660

MTCSSKNVANAVGGKTARACDSCITKRARWYCAADDAFLCQACDSSVHSANSLARRHERVRLKTASYKSINGDEFFNCGPFSGFTKKARTPRQGKHKSKSSSSSEPARNNNNIPFHLVPDLGFDEVNSNSHDENEAQLLYRVPIFDPSVAELCTSPPSVGSTEGGLGAVVVASAFAPDVKYNESESRVQLASDNNYEMESFHELLPSDIELAEFAADVESLLGRGLENECIGMEELGLIDTKHEESEKWKCSGKVKEEGEESYEIVEGDNMMEIGKESSFELNFDYDDSHETLEEVKEKCGEQNENNDYNKGKRKISLQLDYDAVIIAWDSQKCPWTNGDKPNLDADENWPDCMGTFGTEVHYAYGEFGGYGCHPVTVDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASFAVPTFPLLK*