Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0222660 | XP_003597312.1 | 96.795 | 468 | 13 | 2 | 1 | 466 | 13 | 480 | 0.0 | 936 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0222660 | sp|Q9SIB2|KCS12_ARATH | 66.300 | 454 | 148 | 3 | 7 | 456 | 19 | 471 | 0.0 | 636 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0222660 | G7IUA7 | 96.795 | 468 | 13 | 2 | 1 | 466 | 13 | 480 | 0.0 | 936 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004350 | Msa0222660 | 0.810592 | 1.067612e-50 | -8.615850e-47 |
Msa0006700 | Msa0222660 | 0.814745 | 1.317429e-51 | -8.615850e-47 |
Msa0017120 | Msa0222660 | 0.804882 | 1.745298e-49 | -8.615850e-47 |
Msa0020630 | Msa0222660 | 0.818382 | 2.017736e-52 | -8.615850e-47 |
Msa0037820 | Msa0222660 | 0.820307 | 7.351680e-53 | -8.615850e-47 |
Msa0043940 | Msa0222660 | 0.891362 | 4.258309e-74 | -8.615850e-47 |
Msa0044710 | Msa0222660 | 0.801456 | 8.927423e-49 | -8.615850e-47 |
Msa0047470 | Msa0222660 | 0.804880 | 1.746593e-49 | -8.615850e-47 |
Msa0050720 | Msa0222660 | 0.849676 | 2.774431e-60 | -8.615850e-47 |
Msa0050770 | Msa0222660 | 0.839096 | 1.944225e-57 | -8.615850e-47 |
Msa0055280 | Msa0222660 | 0.835214 | 1.911667e-56 | -8.615850e-47 |
Msa0060600 | Msa0222660 | 0.802602 | 5.190491e-49 | -8.615850e-47 |
Msa0074080 | Msa0222660 | 0.803546 | 3.311260e-49 | -8.615850e-47 |
Msa0079250 | Msa0222660 | 0.800069 | 1.713466e-48 | -8.615850e-47 |
Msa0079770 | Msa0222660 | 0.840597 | 7.902262e-58 | -8.615850e-47 |
Msa0084680 | Msa0222660 | 0.823684 | 1.213184e-53 | -8.615850e-47 |
Msa0092710 | Msa0222660 | 0.885063 | 1.122386e-71 | -8.615850e-47 |
Msa0094100 | Msa0222660 | 0.803685 | 3.098411e-49 | -8.615850e-47 |
Msa0101060 | Msa0222660 | 0.839070 | 1.973932e-57 | -8.615850e-47 |
Msa0105340 | Msa0222660 | 0.814910 | 1.211189e-51 | -8.615850e-47 |
Msa0109490 | Msa0222660 | 0.804380 | 2.221397e-49 | -8.615850e-47 |
Msa0127440 | Msa0222660 | 0.832292 | 1.027149e-55 | -8.615850e-47 |
Msa0130800 | Msa0222660 | 0.808568 | 2.905038e-50 | -8.615850e-47 |
Msa0134040 | Msa0222660 | 0.800123 | 1.670373e-48 | -8.615850e-47 |
Msa0143080 | Msa0222660 | 0.800758 | 1.240080e-48 | -8.615850e-47 |
Msa0143970 | Msa0222660 | 0.801304 | 9.590536e-49 | -8.615850e-47 |
Msa0153430 | Msa0222660 | 0.806217 | 9.158250e-50 | -8.615850e-47 |
Msa0155110 | Msa0222660 | 0.807513 | 4.873906e-50 | -8.615850e-47 |
Msa0155610 | Msa0222660 | 0.803857 | 2.853476e-49 | -8.615850e-47 |
Msa0159750 | Msa0222660 | 0.820973 | 5.168712e-53 | -8.615850e-47 |
Msa0182640 | Msa0222660 | 0.880569 | 4.926999e-70 | -8.615850e-47 |
Msa0183610 | Msa0222660 | 0.804823 | 1.795232e-49 | -8.615850e-47 |
Msa0185640 | Msa0222660 | -0.806263 | 8.953167e-50 | -8.615850e-47 |
Msa0193760 | Msa0222660 | 0.831825 | 1.340006e-55 | -8.615850e-47 |
Msa0208630 | Msa0222660 | 0.813354 | 2.670100e-51 | -8.615850e-47 |
Msa0213080 | Msa0222660 | 0.844699 | 6.429703e-59 | -8.615850e-47 |
Msa0216210 | Msa0222660 | 0.813711 | 2.229288e-51 | -8.615850e-47 |
Msa0222660 | Msa0232860 | 0.802523 | 5.387640e-49 | -8.615850e-47 |
Msa0222660 | Msa0235550 | 0.844445 | 7.526349e-59 | -8.615850e-47 |
Msa0222660 | Msa0236980 | 0.800769 | 1.234046e-48 | -8.615850e-47 |
Msa0222660 | Msa0252180 | 0.804999 | 1.649650e-49 | -8.615850e-47 |
Msa0222660 | Msa0264050 | 0.965692 | 6.188276e-125 | -8.615850e-47 |
Msa0222660 | Msa0265820 | 0.814532 | 1.468594e-51 | -8.615850e-47 |
Msa0222660 | Msa0274520 | 0.843591 | 1.274951e-58 | -8.615850e-47 |
Msa0222660 | Msa0277530 | 0.825373 | 4.856138e-54 | -8.615850e-47 |
Msa0222660 | Msa0280490 | 0.817891 | 2.606460e-52 | -8.615850e-47 |
Msa0222660 | Msa0281940 | 0.808725 | 2.689574e-50 | -8.615850e-47 |
Msa0222660 | Msa0282170 | 0.819714 | 1.004405e-52 | -8.615850e-47 |
Msa0222660 | Msa0284870 | 0.813363 | 2.659081e-51 | -8.615850e-47 |
Msa0222660 | Msa0292180 | 0.809854 | 1.540269e-50 | -8.615850e-47 |
Msa0222660 | Msa0296610 | 0.819702 | 1.011084e-52 | -8.615850e-47 |
Msa0222660 | Msa0301980 | 0.945038 | 6.437803e-104 | -8.615850e-47 |
Msa0222660 | Msa0318270 | 0.817051 | 4.030264e-52 | -8.615850e-47 |
Msa0222660 | Msa0318310 | 0.812461 | 4.190346e-51 | -8.615850e-47 |
Msa0222660 | Msa0334980 | 0.812041 | 5.175612e-51 | -8.615850e-47 |
Msa0222660 | Msa0339310 | 0.985784 | 1.173878e-164 | -8.615850e-47 |
Msa0222660 | Msa0354390 | 0.813155 | 2.953940e-51 | -8.615850e-47 |
Msa0222660 | Msa0361250 | 0.831889 | 1.292074e-55 | -8.615850e-47 |
Msa0222660 | Msa0361260 | 0.812333 | 4.468677e-51 | -8.615850e-47 |
Msa0222660 | Msa0363460 | 0.805860 | 1.088838e-49 | -8.615850e-47 |
Msa0222660 | Msa0366870 | 0.817316 | 3.512504e-52 | -8.615850e-47 |
Msa0222660 | Msa0371570 | 0.822773 | 1.980325e-53 | -8.615850e-47 |
Msa0222660 | Msa0389060 | 0.809485 | 1.848600e-50 | -8.615850e-47 |
Msa0222660 | Msa0408630 | 0.827157 | 1.827026e-54 | -8.615850e-47 |
Msa0222660 | Msa0408640 | 0.804233 | 2.383175e-49 | -8.615850e-47 |
Msa0222660 | Msa0411000 | 0.805189 | 1.505246e-49 | -8.615850e-47 |
Msa0222660 | Msa0411560 | 0.808547 | 2.935515e-50 | -8.615850e-47 |
Msa0222660 | Msa0414780 | 0.840286 | 9.528332e-58 | -8.615850e-47 |
Msa0222660 | Msa0419970 | 0.801516 | 8.676593e-49 | -8.615850e-47 |
Msa0222660 | Msa0419990 | 0.847422 | 1.168299e-59 | -8.615850e-47 |
Msa0222660 | Msa0431520 | 0.845540 | 3.811242e-59 | -8.615850e-47 |
Msa0222660 | Msa0431830 | 0.846870 | 1.655396e-59 | -8.615850e-47 |
Msa0222660 | Msa0448120 | 0.809999 | 1.433186e-50 | -8.615850e-47 |
Msa0222660 | Msa0455230 | 0.806675 | 7.332472e-50 | -8.615850e-47 |
Msa0222660 | Msa0455260 | 0.803085 | 4.125502e-49 | -8.615850e-47 |
Msa0222660 | Msa0465930 | 0.835893 | 1.287359e-56 | -8.615850e-47 |
Msa0222660 | Msa0465970 | 0.837757 | 4.306396e-57 | -8.615850e-47 |
Msa0222660 | Msa0473530 | 0.808355 | 3.225697e-50 | -8.615850e-47 |
Msa0222660 | Msa0520220 | 0.816622 | 5.029622e-52 | -8.615850e-47 |
Msa0222660 | Msa0530930 | 0.824357 | 8.432529e-54 | -8.615850e-47 |
Msa0222660 | Msa0532840 | 0.831955 | 1.244877e-55 | -8.615850e-47 |
Msa0222660 | Msa0533010 | 0.836372 | 9.724610e-57 | -8.615850e-47 |
Msa0222660 | Msa0561510 | 0.808520 | 2.975216e-50 | -8.615850e-47 |
Msa0222660 | Msa0568610 | 0.831336 | 1.768088e-55 | -8.615850e-47 |
Msa0222660 | Msa0577230 | 0.823431 | 1.390058e-53 | -8.615850e-47 |
Msa0222660 | Msa0583790 | 0.820595 | 6.313170e-53 | -8.615850e-47 |
Msa0222660 | Msa0587900 | 0.802545 | 5.333178e-49 | -8.615850e-47 |
Msa0222660 | Msa0618520 | 0.827929 | 1.192351e-54 | -8.615850e-47 |
Msa0222660 | Msa0619330 | 0.813364 | 2.657145e-51 | -8.615850e-47 |
Msa0222660 | Msa0620640 | 0.834676 | 2.611879e-56 | -8.615850e-47 |
Msa0222660 | Msa0647000 | 0.800071 | 1.711928e-48 | -8.615850e-47 |
Msa0222660 | Msa0649970 | 0.818394 | 2.005273e-52 | -8.615850e-47 |
Msa0222660 | Msa0651400 | 0.815056 | 1.123954e-51 | -8.615850e-47 |
Msa0222660 | Msa0656270 | 0.801860 | 7.378159e-49 | -8.615850e-47 |
Msa0222660 | Msa0665910 | -0.815561 | 8.679503e-52 | -8.615850e-47 |
Msa0222660 | Msa0667970 | 0.832021 | 1.198923e-55 | -8.615850e-47 |
Msa0222660 | Msa0677820 | 0.825624 | 4.236183e-54 | -8.615850e-47 |
Msa0222660 | Msa0700070 | 0.815025 | 1.141813e-51 | -8.615850e-47 |
Msa0222660 | Msa0704220 | 0.845673 | 3.506651e-59 | -8.615850e-47 |
Msa0222660 | Msa0714600 | 0.805703 | 1.174575e-49 | -8.615850e-47 |
Msa0222660 | Msa0717150 | 0.803950 | 2.729693e-49 | -8.615850e-47 |
Msa0222660 | Msa0718470 | 0.821491 | 3.926329e-53 | -8.615850e-47 |
Msa0222660 | Msa0719340 | 0.806334 | 8.652134e-50 | -8.615850e-47 |
Msa0222660 | Msa0720270 | 0.828702 | 7.764049e-55 | -8.615850e-47 |
Msa0222660 | Msa0724050 | 0.808548 | 2.934438e-50 | -8.615850e-47 |
Msa0222660 | Msa0726610 | 0.809973 | 1.451599e-50 | -8.615850e-47 |
Msa0222660 | Msa0729550 | 0.800878 | 1.172071e-48 | -8.615850e-47 |
Msa0222660 | Msa0730180 | 0.814996 | 1.159054e-51 | -8.615850e-47 |
Msa0222660 | Msa0731710 | 0.820276 | 7.472817e-53 | -8.615850e-47 |
Msa0222660 | Msa0734660 | 0.854528 | 1.159267e-61 | -8.615850e-47 |
Msa0222660 | Msa0738860 | 0.800930 | 1.143750e-48 | -8.615850e-47 |
Msa0222660 | Msa0738870 | 0.803619 | 3.197748e-49 | -8.615850e-47 |
Msa0222660 | Msa0738880 | 0.809906 | 1.500695e-50 | -8.615850e-47 |
Msa0222660 | Msa0750380 | 0.832211 | 1.075728e-55 | -8.615850e-47 |
Msa0222660 | Msa0752580 | 0.842417 | 2.619107e-58 | -8.615850e-47 |
Msa0222660 | Msa0754500 | 0.829447 | 5.122793e-55 | -8.615850e-47 |
Msa0222660 | Msa0758220 | 0.809288 | 2.038129e-50 | -8.615850e-47 |
Msa0222660 | Msa0760840 | 0.800186 | 1.621540e-48 | -8.615850e-47 |
Msa0222660 | Msa0760890 | 0.862081 | 6.522462e-64 | -8.615850e-47 |
Msa0222660 | Msa0763880 | 0.812919 | 3.326758e-51 | -8.615850e-47 |
Msa0222660 | Msa0763910 | 0.805079 | 1.586885e-49 | -8.615850e-47 |
Msa0222660 | Msa0769830 | 0.839836 | 1.248616e-57 | -8.615850e-47 |
Msa0222660 | Msa0770430 | 0.817385 | 3.388789e-52 | -8.615850e-47 |
Msa0222660 | Msa0772150 | 0.815084 | 1.108277e-51 | -8.615850e-47 |
Msa0222660 | Msa0775260 | 0.821387 | 4.148348e-53 | -8.615850e-47 |
Msa0222660 | Msa0776220 | 0.832910 | 7.218808e-56 | -8.615850e-47 |
Msa0222660 | Msa0780140 | 0.801674 | 8.055784e-49 | -8.615850e-47 |
Msa0222660 | Msa0783270 | 0.808162 | 3.547156e-50 | -8.615850e-47 |
Msa0222660 | Msa0784640 | 0.835407 | 1.708782e-56 | -8.615850e-47 |
Msa0222660 | Msa0799570 | 0.803089 | 4.116753e-49 | -8.615850e-47 |
Msa0222660 | Msa0801100 | 0.820822 | 5.599782e-53 | -8.615850e-47 |
Msa0222660 | Msa0802210 | 0.801290 | 9.656037e-49 | -8.615850e-47 |
Msa0222660 | Msa0803130 | 0.809216 | 2.111294e-50 | -8.615850e-47 |
Msa0222660 | Msa0813670 | 0.834384 | 3.092999e-56 | -8.615850e-47 |
Msa0222660 | Msa0819360 | 0.811173 | 7.992874e-51 | -8.615850e-47 |
Msa0222660 | Msa0819370 | 0.808953 | 2.403921e-50 | -8.615850e-47 |
Msa0222660 | Msa0830720 | 0.828129 | 1.067021e-54 | -8.615850e-47 |
Msa0222660 | Msa0830900 | 0.830763 | 2.445669e-55 | -8.615850e-47 |
Msa0222660 | Msa0837790 | 0.805612 | 1.227131e-49 | -8.615850e-47 |
Msa0222660 | Msa0841490 | 0.808173 | 3.527889e-50 | -8.615850e-47 |
Msa0222660 | Msa0848360 | 0.821910 | 3.140276e-53 | -8.615850e-47 |
Msa0222660 | Msa0848380 | 0.831470 | 1.638865e-55 | -8.615850e-47 |
Msa0222660 | Msa0848760 | 0.835300 | 1.818466e-56 | -8.615850e-47 |
Msa0222660 | Msa0853170 | 0.825284 | 5.097074e-54 | -8.615850e-47 |
Msa0222660 | Msa0859520 | 0.805132 | 1.547307e-49 | -8.615850e-47 |
Msa0222660 | Msa0859560 | 0.802218 | 6.226625e-49 | -8.615850e-47 |
Msa0222660 | Msa0863760 | 0.800469 | 1.420579e-48 | -8.615850e-47 |
Msa0222660 | Msa0872420 | 0.815545 | 8.753287e-52 | -8.615850e-47 |
Msa0222660 | Msa0872660 | 0.812391 | 4.341412e-51 | -8.615850e-47 |
Msa0222660 | Msa0890250 | 0.812137 | 4.931844e-51 | -8.615850e-47 |
Msa0222660 | Msa0896210 | 0.803304 | 3.715468e-49 | -8.615850e-47 |
Msa0222660 | Msa0903730 | 0.821967 | 3.046982e-53 | -8.615850e-47 |
Msa0222660 | Msa0905260 | 0.812879 | 3.395789e-51 | -8.615850e-47 |
Msa0222660 | Msa0909710 | 0.833609 | 4.832538e-56 | -8.615850e-47 |
Msa0222660 | Msa0925160 | 0.807265 | 5.500340e-50 | -8.615850e-47 |
Msa0222660 | Msa0934830 | 0.804914 | 1.718467e-49 | -8.615850e-47 |
Msa0222660 | Msa0937240 | 0.832916 | 7.194298e-56 | -8.615850e-47 |
Msa0222660 | Msa0937940 | 0.831452 | 1.656135e-55 | -8.615850e-47 |
Msa0222660 | Msa0950620 | 0.817686 | 2.898741e-52 | -8.615850e-47 |
Msa0222660 | Msa0955260 | 0.810380 | 1.186600e-50 | -8.615850e-47 |
Msa0222660 | Msa0964680 | 0.807397 | 5.157221e-50 | -8.615850e-47 |
Msa0222660 | Msa0971860 | 0.816736 | 4.742020e-52 | -8.615850e-47 |
Msa0222660 | Msa0974530 | 0.822052 | 2.911816e-53 | -8.615850e-47 |
Msa0222660 | Msa0974910 | 0.813208 | 2.875021e-51 | -8.615850e-47 |
Msa0222660 | Msa0975080 | 0.808981 | 2.370711e-50 | -8.615850e-47 |
Msa0222660 | Msa0980440 | 0.801613 | 8.290761e-49 | -8.615850e-47 |
Msa0222660 | Msa0981740 | 0.801595 | 8.361177e-49 | -8.615850e-47 |
Msa0222660 | Msa1004210 | 0.809940 | 1.475722e-50 | -8.615850e-47 |
Msa0222660 | Msa1026760 | 0.816392 | 5.662279e-52 | -8.615850e-47 |
Msa0222660 | Msa1026790 | 0.810181 | 1.309785e-50 | -8.615850e-47 |
Msa0222660 | Msa1030870 | 0.814478 | 1.509422e-51 | -8.615850e-47 |
Msa0222660 | Msa1044040 | 0.816052 | 6.744046e-52 | -8.615850e-47 |
Msa0222660 | Msa1046610 | 0.815083 | 1.108395e-51 | -8.615850e-47 |
Msa0222660 | Msa1048330 | 0.807833 | 4.166167e-50 | -8.615850e-47 |
Msa0222660 | Msa1055360 | 0.810424 | 1.160868e-50 | -8.615850e-47 |
Msa0222660 | Msa1059420 | 0.809212 | 2.115197e-50 | -8.615850e-47 |
Msa0222660 | Msa1063920 | 0.805228 | 1.477178e-49 | -8.615850e-47 |
Msa0222660 | Msa1072350 | 0.801207 | 1.003900e-48 | -8.615850e-47 |
Msa0222660 | Msa1073500 | 0.814424 | 1.551848e-51 | -8.615850e-47 |
Msa0222660 | Msa1076680 | 0.801414 | 9.105817e-49 | -8.615850e-47 |
Msa0222660 | Msa1078570 | 0.800651 | 1.303941e-48 | -8.615850e-47 |
Msa0222660 | Msa1078740 | 0.807431 | 5.071894e-50 | -8.615850e-47 |
Msa0222660 | Msa1080460 | 0.809894 | 1.509705e-50 | -8.615850e-47 |
Msa0222660 | Msa1095480 | 0.845513 | 3.876278e-59 | -8.615850e-47 |
Msa0222660 | Msa1100490 | 0.827099 | 1.885738e-54 | -8.615850e-47 |
Msa0222660 | Msa1135870 | 0.801786 | 7.640294e-49 | -8.615850e-47 |
Msa0222660 | Msa1140010 | 0.804631 | 1.968880e-49 | -8.615850e-47 |
Msa0222660 | Msa1142500 | 0.831265 | 1.840883e-55 | -8.615850e-47 |
Msa0222660 | Msa1157730 | 0.844569 | 6.971046e-59 | -8.615850e-47 |
Msa0222660 | Msa1166970 | 0.800980 | 1.117353e-48 | -8.615850e-47 |
Msa0222660 | Msa1178160 | 0.820804 | 5.651066e-53 | -8.615850e-47 |
Msa0222660 | Msa1182830 | 0.804826 | 1.793091e-49 | -8.615850e-47 |
Msa0222660 | Msa1184580 | 0.815074 | 1.113738e-51 | -8.615850e-47 |
Msa0222660 | Msa1205010 | -0.807126 | 5.886834e-50 | -8.615850e-47 |
Msa0222660 | Msa1206020 | 0.809490 | 1.844094e-50 | -8.615850e-47 |
Msa0222660 | Msa1238700 | 0.801344 | 9.413261e-49 | -8.615850e-47 |
Msa0222660 | Msa1252070 | 0.820989 | 5.123293e-53 | -8.615850e-47 |
Msa0222660 | Msa1272130 | 0.810870 | 9.294517e-51 | -8.615850e-47 |
Msa0222660 | Msa1280130 | 0.810543 | 1.093916e-50 | -8.615850e-47 |
Msa0222660 | Msa1292730 | 0.833329 | 5.677028e-56 | -8.615850e-47 |
Msa0222660 | Msa1305750 | 0.832130 | 1.126577e-55 | -8.615850e-47 |
Msa0222660 | Msa1306190 | 0.808245 | 3.404457e-50 | -8.615850e-47 |
Msa0222660 | Msa1306200 | 0.815626 | 8.393869e-52 | -8.615850e-47 |
Msa0222660 | Msa1328850 | 0.805067 | 1.596356e-49 | -8.615850e-47 |
Msa0222660 | Msa1336480 | 0.816993 | 4.152776e-52 | -8.615850e-47 |
Msa0222660 | Msa1343340 | 0.801935 | 7.120213e-49 | -8.615850e-47 |
Msa0222660 | Msa1347620 | 0.813857 | 2.069951e-51 | -8.615850e-47 |
Msa0222660 | Msa1361190 | 0.839211 | 1.814861e-57 | -8.615850e-47 |
Msa0222660 | Msa1374440 | 0.803063 | 4.168536e-49 | -8.615850e-47 |
Msa0222660 | Msa1378460 | 0.821246 | 4.470326e-53 | -8.615850e-47 |
Msa0222660 | Msa1378470 | 0.800189 | 1.619439e-48 | -8.615850e-47 |
Msa0222660 | Msa1385620 | 0.818164 | 2.261188e-52 | -8.615850e-47 |
Msa0222660 | Msa1397970 | 0.816562 | 5.187166e-52 | -8.615850e-47 |
Msa0222660 | Msa1405770 | 0.802585 | 5.232044e-49 | -8.615850e-47 |
Msa0222660 | Msa1412080 | 0.801772 | 7.688956e-49 | -8.615850e-47 |
Msa0222660 | Msa1412520 | 0.816404 | 5.627642e-52 | -8.615850e-47 |
Msa0222660 | Msa1418200 | 0.805678 | 1.188625e-49 | -8.615850e-47 |
Msa0222660 | Msa1427830 | 0.807505 | 4.892949e-50 | -8.615850e-47 |
Msa0222660 | Msa1431730 | 0.803769 | 2.976571e-49 | -8.615850e-47 |
Msa0222660 | Msa1434020 | 0.817940 | 2.541273e-52 | -8.615850e-47 |
Msa0222660 | Msa1435040 | 0.809010 | 2.337534e-50 | -8.615850e-47 |
Msa0222660 | Msa1439120 | 0.898698 | 4.110903e-77 | -8.615850e-47 |
Msa0222660 | Msa1440180 | 0.804323 | 2.282786e-49 | -8.615850e-47 |
Msa0222660 | Msa1440220 | 0.882406 | 1.070220e-70 | -8.615850e-47 |
Msa0222660 | Msa1440610 | 0.852709 | 3.863953e-61 | -8.615850e-47 |
Msa0222660 | Msa1442290 | 0.838933 | 2.141782e-57 | -8.615850e-47 |
Msa0222660 | Msa1444450 | 0.823676 | 1.218457e-53 | -8.615850e-47 |
Msa0222660 | Msa1447440 | 0.807795 | 4.244696e-50 | -8.615850e-47 |
Msa0222660 | Msa1449740 | 0.806394 | 8.401530e-50 | -8.615850e-47 |
Msa0222660 | Msa1450020 | 0.818240 | 2.173673e-52 | -8.615850e-47 |
Msa0222660 | Msa1453710 | 0.814527 | 1.472543e-51 | -8.615850e-47 |
Msa0222660 | Msa1454110 | 0.809250 | 2.076466e-50 | -8.615850e-47 |
Msa0222660 | Msa1455660 | 0.895465 | 9.337563e-76 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0222660 | MtrunA17_Chr2g0327721 | 96.795 | 468 | 13 | 2 | 1 | 466 | 13 | 480 | 0.0 | 936 |
Msa0222660 | MtrunA17_Chr4g0030601 | 71.335 | 457 | 120 | 3 | 1 | 456 | 13 | 459 | 0.0 | 707 |
Msa0222660 | MtrunA17_Chr4g0030581 | 72.570 | 463 | 122 | 3 | 1 | 462 | 13 | 471 | 0.0 | 703 |
Msa0222660 | MtrunA17_Chr4g0030591 | 70.259 | 464 | 132 | 3 | 1 | 462 | 13 | 472 | 0.0 | 686 |
Msa0222660 | MtrunA17_Chr1g0212951 | 54.566 | 449 | 184 | 5 | 13 | 447 | 26 | 468 | 0.0 | 516 |
Msa0222660 | MtrunA17_Chr7g0276251 | 44.186 | 430 | 221 | 6 | 14 | 436 | 117 | 534 | 1.53e-123 | 370 |
Msa0222660 | MtrunA17_Chr1g0188051 | 41.379 | 435 | 233 | 8 | 3 | 432 | 88 | 505 | 2.05e-109 | 333 |
Msa0222660 | MtrunA17_Chr1g0209881 | 40.553 | 434 | 238 | 7 | 3 | 432 | 72 | 489 | 2.96e-109 | 332 |
Msa0222660 | MtrunA17_Chr5g0423521 | 41.055 | 436 | 234 | 7 | 4 | 432 | 70 | 489 | 5.47e-109 | 332 |
Msa0222660 | MtrunA17_Chr4g0035081 | 40.000 | 420 | 232 | 5 | 15 | 430 | 96 | 499 | 5.38e-108 | 329 |
Msa0222660 | MtrunA17_Chr3g0136561 | 39.813 | 427 | 234 | 5 | 15 | 430 | 486 | 900 | 1.08e-105 | 334 |
Msa0222660 | MtrunA17_Chr4g0063011 | 38.584 | 438 | 228 | 5 | 15 | 448 | 87 | 487 | 4.78e-105 | 322 |
Msa0222660 | MtrunA17_Chr1g0166191 | 39.007 | 423 | 237 | 4 | 15 | 432 | 105 | 511 | 1.54e-104 | 321 |
Msa0222660 | MtrunA17_Chr2g0306781 | 41.689 | 379 | 200 | 4 | 57 | 430 | 34 | 396 | 7.18e-99 | 302 |
Msa0222660 | MtrunA17_Chr2g0277841 | 39.808 | 417 | 237 | 4 | 15 | 430 | 45 | 448 | 3.91e-96 | 297 |
Msa0222660 | MtrunA17_Chr6g0480561 | 38.955 | 421 | 227 | 10 | 20 | 430 | 65 | 465 | 2.48e-94 | 293 |
Msa0222660 | MtrunA17_Chr2g0295781 | 36.967 | 422 | 251 | 5 | 11 | 430 | 40 | 448 | 1.47e-91 | 285 |
Msa0222660 | MtrunA17_Chr7g0276241 | 44.333 | 300 | 148 | 4 | 136 | 432 | 2 | 285 | 8.07e-89 | 273 |
Msa0222660 | MtrunA17_Chr2g0282281 | 35.784 | 408 | 243 | 4 | 17 | 422 | 110 | 500 | 5.11e-88 | 278 |
Msa0222660 | MtrunA17_Chr1g0204301 | 37.647 | 425 | 237 | 8 | 15 | 430 | 78 | 483 | 1.47e-85 | 271 |
Msa0222660 | MtrunA17_Chr7g0250661 | 42.667 | 300 | 152 | 3 | 136 | 430 | 2 | 286 | 7.11e-83 | 257 |
Msa0222660 | MtrunA17_Chr3g0115021 | 37.055 | 421 | 234 | 8 | 20 | 430 | 83 | 482 | 4.42e-82 | 261 |
Msa0222660 | MtrunA17_Chr3g0115041 | 37.055 | 421 | 234 | 8 | 20 | 430 | 83 | 482 | 5.02e-82 | 261 |
Msa0222660 | MtrunA17_Chr6g0469631 | 37.589 | 423 | 229 | 8 | 20 | 430 | 82 | 481 | 5.96e-78 | 251 |
Msa0222660 | MtrunA17_Chr6g0461631 | 39.474 | 266 | 141 | 3 | 170 | 430 | 3 | 253 | 2.14e-61 | 201 |
Msa0222660 | MtrunA17_Chr4g0026871 | 41.841 | 239 | 118 | 4 | 198 | 430 | 1 | 224 | 6.74e-57 | 188 |
Msa0222660 | MtrunA17_Chr4g0026791 | 43.523 | 193 | 91 | 3 | 198 | 386 | 1 | 179 | 5.58e-44 | 152 |
Msa0222660 | MtrunA17_Chr4g0026721 | 37.870 | 169 | 85 | 3 | 267 | 430 | 3 | 156 | 2.35e-32 | 120 |
Msa0222660 | MtrunA17_Chr4g0026861 | 31.056 | 161 | 110 | 1 | 11 | 171 | 54 | 213 | 3.72e-22 | 94.4 |
Msa0222660 | MtrunA17_Chr6g0461621 | 32.222 | 180 | 114 | 5 | 6 | 182 | 55 | 229 | 9.05e-21 | 90.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0222660 | AT2G28630.2 | 66.300 | 454 | 148 | 3 | 7 | 456 | 19 | 471 | 0.0 | 636 |
Msa0222660 | AT2G28630.1 | 66.300 | 454 | 148 | 3 | 7 | 456 | 19 | 471 | 0.0 | 636 |
Msa0222660 | AT1G07720.2 | 65.310 | 467 | 143 | 4 | 2 | 456 | 57 | 516 | 0.0 | 631 |
Msa0222660 | AT1G07720.1 | 65.310 | 467 | 143 | 4 | 2 | 456 | 14 | 473 | 0.0 | 630 |
Msa0222660 | AT5G04530.1 | 53.244 | 447 | 196 | 5 | 5 | 447 | 18 | 455 | 2.37e-179 | 510 |
Msa0222660 | AT1G01120.1 | 43.192 | 426 | 212 | 6 | 15 | 430 | 118 | 523 | 4.72e-123 | 369 |
Msa0222660 | AT2G46720.1 | 38.940 | 434 | 248 | 6 | 3 | 432 | 44 | 464 | 1.02e-111 | 338 |
Msa0222660 | AT4G34510.1 | 41.080 | 426 | 228 | 5 | 11 | 430 | 74 | 482 | 2.03e-110 | 335 |
Msa0222660 | AT1G25450.1 | 41.435 | 432 | 233 | 7 | 3 | 430 | 68 | 483 | 3.36e-109 | 332 |
Msa0222660 | AT4G34520.1 | 39.723 | 433 | 226 | 6 | 15 | 430 | 73 | 487 | 3.70e-108 | 330 |
Msa0222660 | AT2G15090.1 | 38.182 | 440 | 248 | 7 | 1 | 430 | 51 | 476 | 3.38e-107 | 327 |
Msa0222660 | AT2G16280.1 | 40.000 | 425 | 225 | 6 | 15 | 430 | 104 | 507 | 6.75e-107 | 327 |
Msa0222660 | AT1G19440.1 | 38.353 | 425 | 232 | 6 | 15 | 430 | 108 | 511 | 3.58e-106 | 325 |
Msa0222660 | AT5G43760.1 | 40.749 | 427 | 226 | 7 | 15 | 430 | 107 | 517 | 2.51e-105 | 323 |
Msa0222660 | AT4G34250.1 | 38.426 | 432 | 228 | 6 | 15 | 430 | 75 | 484 | 3.27e-105 | 322 |
Msa0222660 | AT2G26640.1 | 40.411 | 438 | 233 | 8 | 1 | 430 | 83 | 500 | 4.17e-105 | 322 |
Msa0222660 | AT3G10280.1 | 37.182 | 433 | 250 | 5 | 3 | 432 | 44 | 457 | 5.37e-105 | 320 |
Msa0222660 | AT1G68530.1 | 40.573 | 419 | 231 | 7 | 15 | 430 | 85 | 488 | 1.14e-104 | 321 |
Msa0222660 | AT1G04220.1 | 38.864 | 440 | 240 | 8 | 3 | 430 | 90 | 512 | 2.62e-103 | 318 |
Msa0222660 | AT2G26250.1 | 35.780 | 436 | 255 | 5 | 15 | 430 | 117 | 547 | 2.33e-98 | 306 |
Msa0222660 | AT5G49070.1 | 37.176 | 425 | 255 | 4 | 6 | 430 | 40 | 452 | 6.32e-95 | 295 |
Msa0222660 | AT1G71160.1 | 36.740 | 411 | 247 | 3 | 20 | 430 | 48 | 445 | 6.34e-92 | 286 |
Msa0222660 | AT3G52160.1 | 31.796 | 412 | 236 | 4 | 4 | 414 | 73 | 440 | 3.25e-75 | 243 |
Msa0222660 | AT3G52160.2 | 34.270 | 356 | 189 | 4 | 60 | 414 | 16 | 327 | 2.83e-71 | 229 |
Msa0222660 | AT1G68530.2 | 38.007 | 271 | 161 | 3 | 15 | 282 | 85 | 351 | 5.95e-58 | 196 |
Msa0222660 | AT5G49070.2 | 31.183 | 279 | 189 | 2 | 3 | 281 | 37 | 312 | 1.90e-40 | 147 |
Find 75 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTAAATGCAACAGTTGTTAT+TGG | 0.230294 | 2_1:-71962712 | Msa0222660:CDS |
CTTAGTACAAATTGGTATTC+AGG | 0.248106 | 2_1:-71963358 | Msa0222660:CDS |
AAAGCTCTTGTAGCTGCTTT+TGG | 0.259427 | 2_1:+71963121 | None:intergenic |
TACCAGCTAGGGAAATATTT+AGG | 0.265669 | 2_1:-71963063 | Msa0222660:CDS |
ATGACATTCTTGCTGGTTCT+AGG | 0.278483 | 2_1:+71962852 | None:intergenic |
CGGCCTTCGATGAAGTTTCT+TGG | 0.294675 | 2_1:+71963694 | None:intergenic |
GTGGTATGTGTTGGGGTATA+TGG | 0.299234 | 2_1:-71962795 | Msa0222660:CDS |
GAACAATGTGGCAAGATTAT+AGG | 0.312551 | 2_1:-71963802 | Msa0222660:CDS |
TTACTATCCACCACACTCTT+TGG | 0.331528 | 2_1:-71962633 | Msa0222660:CDS |
CCATCGTTGGGTTCACAGTT+CGG | 0.347303 | 2_1:+71963674 | None:intergenic |
TCCACTTCGTCTTCCATCGT+TGG | 0.351430 | 2_1:+71963661 | None:intergenic |
CAGAGTCTCTTAGTACAAAT+TGG | 0.351617 | 2_1:-71963366 | Msa0222660:CDS |
ATAAAAGCTTATAACCTATC+TGG | 0.357029 | 2_1:-71963478 | Msa0222660:CDS |
AGAATGTCATTACATAGATT+TGG | 0.358478 | 2_1:-71962839 | Msa0222660:CDS |
TGCACTTGTGTTTCCTGATC+TGG | 0.359947 | 2_1:-71963912 | Msa0222660:CDS |
TAAATGCAACAGTTGTTATT+GGG | 0.360260 | 2_1:-71962711 | Msa0222660:CDS |
AGTTTGAGTTTGAAAGTGTT+TGG | 0.363208 | 2_1:+71962563 | None:intergenic |
CTCTTTGGCCAACCCATTCA+TGG | 0.371696 | 2_1:-71962618 | Msa0222660:CDS |
CTATGTAATGACATTCTTGC+TGG | 0.374650 | 2_1:+71962845 | None:intergenic |
AAAGCAGTGATAGATGGAAT+TGG | 0.380405 | 2_1:-71962902 | Msa0222660:CDS |
CCACTTCGTCTTCCATCGTT+GGG | 0.388821 | 2_1:+71963662 | None:intergenic |
CAACCGTACTTCTCCATGAA+TGG | 0.401060 | 2_1:+71962605 | None:intergenic |
GGAAGACGAAGTGGAGGAAA+TGG | 0.412780 | 2_1:-71963653 | Msa0222660:CDS |
CCAAGTGATGAAAGAAAACT+TGG | 0.421127 | 2_1:-71963829 | Msa0222660:CDS |
AGCTTATAACCTATCTGGTA+TGG | 0.425685 | 2_1:-71963473 | Msa0222660:CDS |
GCAAAGCTTCTAAACAAATC+AGG | 0.429501 | 2_1:-71963607 | Msa0222660:CDS |
ATAGGAAACAATGAGAATAT+TGG | 0.429933 | 2_1:-71963784 | Msa0222660:CDS |
CTGAGTTGACAACGGCTTTG+AGG | 0.431728 | 2_1:+71963740 | None:intergenic |
ATTGGTATTCAGGAAACAAT+AGG | 0.432471 | 2_1:-71963348 | Msa0222660:CDS |
AAGCAGTGATAGATGGAATT+GGG | 0.433566 | 2_1:-71962901 | Msa0222660:CDS |
AAGTCAGCTGCAAGATGGTT+TGG | 0.438277 | 2_1:-71962992 | Msa0222660:CDS |
GGAGGAAAAGCAGTGATAGA+TGG | 0.443045 | 2_1:-71962908 | Msa0222660:CDS |
AGAGTATTGATGATAAGTTT+AGG | 0.443493 | 2_1:-71962743 | Msa0222660:CDS |
ATGATTCTTGAAGTTAAAGA+AGG | 0.444901 | 2_1:+71963526 | None:intergenic |
TACCTAAATATTTCCCTAGC+TGG | 0.449686 | 2_1:+71963061 | None:intergenic |
AGTAGTTTGTGGTATGTGTT+GGG | 0.450299 | 2_1:-71962803 | Msa0222660:CDS |
CAAATCAGGCATTTCACCTT+CGG | 0.453132 | 2_1:-71963593 | Msa0222660:CDS |
AGAGATGTTGTTGGTGATGA+TGG | 0.459031 | 2_1:-71962680 | Msa0222660:CDS |
TCACCAGTGAATTTCAAAAC+AGG | 0.477090 | 2_1:-71962956 | Msa0222660:CDS |
CTCAAAGCCGTTGTCAACTC+AGG | 0.488420 | 2_1:-71963739 | Msa0222660:CDS |
AACCGTACTTCTCCATGAAT+GGG | 0.497250 | 2_1:+71962606 | None:intergenic |
GAAGATGAACAAGGTAAACT+TGG | 0.499726 | 2_1:-71963166 | Msa0222660:CDS |
AACCATCTTGCAGCTGACTT+AGG | 0.502261 | 2_1:+71962995 | None:intergenic |
AGTTTAATATGTAACACTCT+TGG | 0.508115 | 2_1:+71963866 | None:intergenic |
CTCCTAAGTCAGCTGCAAGA+TGG | 0.509644 | 2_1:-71962997 | Msa0222660:CDS |
TTGATGATAAGTTTAGGTGC+TGG | 0.511949 | 2_1:-71962737 | Msa0222660:CDS |
AAGTAGTTTGTGGTATGTGT+TGG | 0.515984 | 2_1:-71962804 | Msa0222660:CDS |
GCCGTTGTCAACTCAGGCAT+TGG | 0.520687 | 2_1:-71963733 | Msa0222660:CDS |
GAAGTAATGAGAGATGTTGT+TGG | 0.523138 | 2_1:-71962689 | Msa0222660:CDS |
CACTACAACCCATACCAGAT+AGG | 0.541455 | 2_1:+71963464 | None:intergenic |
GCTTATAACCTATCTGGTAT+GGG | 0.546638 | 2_1:-71963472 | Msa0222660:CDS |
ATACATCAGCAAGTAGTTTG+TGG | 0.556511 | 2_1:-71962814 | Msa0222660:CDS |
GAATTGCACAACCGCCGGTA+CGG | 0.562704 | 2_1:+71963299 | None:intergenic |
TTCGGAGATCGATATTCTTG+TGG | 0.562977 | 2_1:-71963575 | Msa0222660:CDS |
CATTCATGGAGAAGTACGGT+TGG | 0.595870 | 2_1:-71962604 | Msa0222660:CDS |
TGTCTAGTTAGAACTCATCA+TGG | 0.608151 | 2_1:-71963226 | Msa0222660:CDS |
AACCCATTCATGGAGAAGTA+CGG | 0.611169 | 2_1:-71962608 | Msa0222660:CDS |
GTACTTCTCCATGAATGGGT+TGG | 0.611489 | 2_1:+71962610 | None:intergenic |
AACGATGGAAGACGAAGTGG+AGG | 0.619961 | 2_1:-71963659 | Msa0222660:CDS |
GGTATATGGAAGCTAAGAAG+AGG | 0.621077 | 2_1:-71962781 | Msa0222660:CDS |
TACGGAAAAGACAATTTGCA+AGG | 0.623230 | 2_1:+71963317 | None:intergenic |
CCCAACGATGGAAGACGAAG+TGG | 0.624451 | 2_1:-71963662 | Msa0222660:CDS |
TGGTGATGATGGAAATGTGT+GGG | 0.626310 | 2_1:-71962669 | Msa0222660:CDS |
GCTCCAAGAAACTTCATCGA+AGG | 0.628524 | 2_1:-71963697 | Msa0222660:CDS |
GAGAAGAATTGCACAACCGC+CGG | 0.629617 | 2_1:+71963294 | None:intergenic |
GTAGTTTGTGGTATGTGTTG+GGG | 0.633510 | 2_1:-71962802 | Msa0222660:CDS |
TAACCATTACAAAATGAGAG+AGG | 0.653134 | 2_1:-71963503 | Msa0222660:CDS |
TGTCAACTCAGGCATTGGTG+AGG | 0.663337 | 2_1:-71963728 | Msa0222660:CDS |
CCGAACTGTGAACCCAACGA+TGG | 0.667415 | 2_1:-71963674 | Msa0222660:CDS |
ACAAGAATATCGATCTCCGA+AGG | 0.671733 | 2_1:+71963577 | None:intergenic |
ACCAATGCCTGAGTTGACAA+CGG | 0.693257 | 2_1:+71963732 | None:intergenic |
AATGGGTTGGCCAAAGAGTG+TGG | 0.696430 | 2_1:+71962623 | None:intergenic |
TTGGTGATGATGGAAATGTG+TGG | 0.702877 | 2_1:-71962670 | Msa0222660:CDS |
GGGTTGGCCAAAGAGTGTGG+TGG | 0.735704 | 2_1:+71962626 | None:intergenic |
AAACTTGGAAGTGAACAATG+TGG | 0.743662 | 2_1:-71963814 | Msa0222660:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AGCTTTTACTGATAATTTAA+GGG | - | chr2_1:71963344-71963363 | Msa0222660:CDS | 20.0% |
!!! | AGCTTTTACTGATAATTTAA+GGG | - | chr2_1:71963344-71963363 | Msa0222660:CDS | 20.0% |
! | GAAAAAATTTGATCAGAGAA+GGG | - | chr2_1:71962558-71962577 | Msa0222660:CDS | 25.0% |
! | AGTTTAATATGTAACACTCT+TGG | + | chr2_1:71962585-71962604 | None:intergenic | 25.0% |
! | ATAGGAAACAATGAGAATAT+TGG | - | chr2_1:71962664-71962683 | Msa0222660:CDS | 25.0% |
! | ATGATTCTTGAAGTTAAAGA+AGG | + | chr2_1:71962925-71962944 | None:intergenic | 25.0% |
! | ATAAAAGCTTATAACCTATC+TGG | - | chr2_1:71962970-71962989 | Msa0222660:CDS | 25.0% |
!! | GAGCTTTTACTGATAATTTA+AGG | - | chr2_1:71963343-71963362 | Msa0222660:CDS | 25.0% |
! | AGAATGTCATTACATAGATT+TGG | - | chr2_1:71963609-71963628 | Msa0222660:CDS | 25.0% |
!!! | AGAGTATTGATGATAAGTTT+AGG | - | chr2_1:71963705-71963724 | Msa0222660:CDS | 25.0% |
! | TTAAATGCAACAGTTGTTAT+TGG | - | chr2_1:71963736-71963755 | Msa0222660:CDS | 25.0% |
!! | TAAATGCAACAGTTGTTATT+GGG | - | chr2_1:71963737-71963756 | Msa0222660:CDS | 25.0% |
! | GAAAAAATTTGATCAGAGAA+GGG | - | chr2_1:71962558-71962577 | Msa0222660:CDS | 25.0% |
! | AGTTTAATATGTAACACTCT+TGG | + | chr2_1:71962585-71962604 | None:intergenic | 25.0% |
! | ATAGGAAACAATGAGAATAT+TGG | - | chr2_1:71962664-71962683 | Msa0222660:CDS | 25.0% |
! | ATGATTCTTGAAGTTAAAGA+AGG | + | chr2_1:71962925-71962944 | None:intergenic | 25.0% |
! | ATAAAAGCTTATAACCTATC+TGG | - | chr2_1:71962970-71962989 | Msa0222660:CDS | 25.0% |
!! | GAGCTTTTACTGATAATTTA+AGG | - | chr2_1:71963343-71963362 | Msa0222660:CDS | 25.0% |
! | AGAATGTCATTACATAGATT+TGG | - | chr2_1:71963609-71963628 | Msa0222660:CDS | 25.0% |
!!! | AGAGTATTGATGATAAGTTT+AGG | - | chr2_1:71963705-71963724 | Msa0222660:CDS | 25.0% |
! | TTAAATGCAACAGTTGTTAT+TGG | - | chr2_1:71963736-71963755 | Msa0222660:CDS | 25.0% |
!! | TAAATGCAACAGTTGTTATT+GGG | - | chr2_1:71963737-71963756 | Msa0222660:CDS | 25.0% |
!!! | GATCAAATTTTTTCCAGATC+AGG | + | chr2_1:71962552-71962571 | None:intergenic | 30.0% |
GGAAAAAATTTGATCAGAGA+AGG | - | chr2_1:71962557-71962576 | Msa0222660:CDS | 30.0% | |
TAACCATTACAAAATGAGAG+AGG | - | chr2_1:71962945-71962964 | Msa0222660:CDS | 30.0% | |
! | TATCCTCTCTCATTTTGTAA+TGG | + | chr2_1:71962951-71962970 | None:intergenic | 30.0% |
CTTAGTACAAATTGGTATTC+AGG | - | chr2_1:71963090-71963109 | Msa0222660:CDS | 30.0% | |
ATTGGTATTCAGGAAACAAT+AGG | - | chr2_1:71963100-71963119 | Msa0222660:CDS | 30.0% | |
!!! | CAGTATAGCTTTGTGTTTTA+AGG | + | chr2_1:71963193-71963212 | None:intergenic | 30.0% |
AGTCAAAAAGAAGATGAACA+AGG | - | chr2_1:71963273-71963292 | Msa0222660:CDS | 30.0% | |
! | ACCTAAAATTTTACCAGCTA+GGG | - | chr2_1:71963374-71963393 | Msa0222660:CDS | 30.0% |
!! | AGTTTGAGTTTGAAAGTGTT+TGG | + | chr2_1:71963888-71963907 | None:intergenic | 30.0% |
!!! | GATCAAATTTTTTCCAGATC+AGG | + | chr2_1:71962552-71962571 | None:intergenic | 30.0% |
GGAAAAAATTTGATCAGAGA+AGG | - | chr2_1:71962557-71962576 | Msa0222660:CDS | 30.0% | |
TAACCATTACAAAATGAGAG+AGG | - | chr2_1:71962945-71962964 | Msa0222660:CDS | 30.0% | |
! | TATCCTCTCTCATTTTGTAA+TGG | + | chr2_1:71962951-71962970 | None:intergenic | 30.0% |
CTTAGTACAAATTGGTATTC+AGG | - | chr2_1:71963090-71963109 | Msa0222660:CDS | 30.0% | |
ATTGGTATTCAGGAAACAAT+AGG | - | chr2_1:71963100-71963119 | Msa0222660:CDS | 30.0% | |
!!! | CAGTATAGCTTTGTGTTTTA+AGG | + | chr2_1:71963193-71963212 | None:intergenic | 30.0% |
AGTCAAAAAGAAGATGAACA+AGG | - | chr2_1:71963273-71963292 | Msa0222660:CDS | 30.0% | |
! | ACCTAAAATTTTACCAGCTA+GGG | - | chr2_1:71963374-71963393 | Msa0222660:CDS | 30.0% |
!! | AGTTTGAGTTTGAAAGTGTT+TGG | + | chr2_1:71963888-71963907 | None:intergenic | 30.0% |
! | CCAAGTTTTCTTTCATCACT+TGG | + | chr2_1:71962622-71962641 | None:intergenic | 35.0% |
CCAAGTGATGAAAGAAAACT+TGG | - | chr2_1:71962619-71962638 | Msa0222660:CDS | 35.0% | |
AAACTTGGAAGTGAACAATG+TGG | - | chr2_1:71962634-71962653 | Msa0222660:CDS | 35.0% | |
GAACAATGTGGCAAGATTAT+AGG | - | chr2_1:71962646-71962665 | Msa0222660:CDS | 35.0% | |
GCAAAGCTTCTAAACAAATC+AGG | - | chr2_1:71962841-71962860 | Msa0222660:CDS | 35.0% | |
AGCTTATAACCTATCTGGTA+TGG | - | chr2_1:71962975-71962994 | Msa0222660:CDS | 35.0% | |
GCTTATAACCTATCTGGTAT+GGG | - | chr2_1:71962976-71962995 | Msa0222660:CDS | 35.0% | |
CAGAGTCTCTTAGTACAAAT+TGG | - | chr2_1:71963082-71963101 | Msa0222660:CDS | 35.0% | |
TACGGAAAAGACAATTTGCA+AGG | + | chr2_1:71963134-71963153 | None:intergenic | 35.0% | |
TGTCTAGTTAGAACTCATCA+TGG | - | chr2_1:71963222-71963241 | Msa0222660:CDS | 35.0% | |
GAAGATGAACAAGGTAAACT+TGG | - | chr2_1:71963282-71963301 | Msa0222660:CDS | 35.0% | |
!! | CTTTTGGAAGATCTTTAGCT+AGG | + | chr2_1:71963314-71963333 | None:intergenic | 35.0% |
! | CACCTAAAATTTTACCAGCT+AGG | - | chr2_1:71963373-71963392 | Msa0222660:CDS | 35.0% |
! | TCCCTAGCTGGTAAAATTTT+AGG | + | chr2_1:71963378-71963397 | None:intergenic | 35.0% |
TACCAGCTAGGGAAATATTT+AGG | - | chr2_1:71963385-71963404 | Msa0222660:CDS | 35.0% | |
TACCTAAATATTTCCCTAGC+TGG | + | chr2_1:71963390-71963409 | None:intergenic | 35.0% | |
TCACCAGTGAATTTCAAAAC+AGG | - | chr2_1:71963492-71963511 | Msa0222660:CDS | 35.0% | |
!!! | ACACCTGTTTTGAAATTCAC+TGG | + | chr2_1:71963498-71963517 | None:intergenic | 35.0% |
! | GATCATTTTGTTCTTCACAC+TGG | - | chr2_1:71963519-71963538 | Msa0222660:CDS | 35.0% |
AAAGCAGTGATAGATGGAAT+TGG | - | chr2_1:71963546-71963565 | Msa0222660:CDS | 35.0% | |
AAGCAGTGATAGATGGAATT+GGG | - | chr2_1:71963547-71963566 | Msa0222660:CDS | 35.0% | |
CTATGTAATGACATTCTTGC+TGG | + | chr2_1:71963606-71963625 | None:intergenic | 35.0% | |
ATACATCAGCAAGTAGTTTG+TGG | - | chr2_1:71963634-71963653 | Msa0222660:CDS | 35.0% | |
! | AAGTAGTTTGTGGTATGTGT+TGG | - | chr2_1:71963644-71963663 | Msa0222660:CDS | 35.0% |
! | AGTAGTTTGTGGTATGTGTT+GGG | - | chr2_1:71963645-71963664 | Msa0222660:CDS | 35.0% |
GCTAAGAAGAGGTTGAAAAA+AGG | - | chr2_1:71963678-71963697 | Msa0222660:CDS | 35.0% | |
! | TTGATGATAAGTTTAGGTGC+TGG | - | chr2_1:71963711-71963730 | Msa0222660:CDS | 35.0% |
GAAGTAATGAGAGATGTTGT+TGG | - | chr2_1:71963759-71963778 | Msa0222660:CDS | 35.0% | |
! | CCAAGTTTTCTTTCATCACT+TGG | + | chr2_1:71962622-71962641 | None:intergenic | 35.0% |
CCAAGTGATGAAAGAAAACT+TGG | - | chr2_1:71962619-71962638 | Msa0222660:CDS | 35.0% | |
AAACTTGGAAGTGAACAATG+TGG | - | chr2_1:71962634-71962653 | Msa0222660:CDS | 35.0% | |
GAACAATGTGGCAAGATTAT+AGG | - | chr2_1:71962646-71962665 | Msa0222660:CDS | 35.0% | |
GCAAAGCTTCTAAACAAATC+AGG | - | chr2_1:71962841-71962860 | Msa0222660:CDS | 35.0% | |
AGCTTATAACCTATCTGGTA+TGG | - | chr2_1:71962975-71962994 | Msa0222660:CDS | 35.0% | |
GCTTATAACCTATCTGGTAT+GGG | - | chr2_1:71962976-71962995 | Msa0222660:CDS | 35.0% | |
CAGAGTCTCTTAGTACAAAT+TGG | - | chr2_1:71963082-71963101 | Msa0222660:CDS | 35.0% | |
TACGGAAAAGACAATTTGCA+AGG | + | chr2_1:71963134-71963153 | None:intergenic | 35.0% | |
TGTCTAGTTAGAACTCATCA+TGG | - | chr2_1:71963222-71963241 | Msa0222660:CDS | 35.0% | |
GAAGATGAACAAGGTAAACT+TGG | - | chr2_1:71963282-71963301 | Msa0222660:CDS | 35.0% | |
!! | CTTTTGGAAGATCTTTAGCT+AGG | + | chr2_1:71963314-71963333 | None:intergenic | 35.0% |
! | CACCTAAAATTTTACCAGCT+AGG | - | chr2_1:71963373-71963392 | Msa0222660:CDS | 35.0% |
! | TCCCTAGCTGGTAAAATTTT+AGG | + | chr2_1:71963378-71963397 | None:intergenic | 35.0% |
TACCAGCTAGGGAAATATTT+AGG | - | chr2_1:71963385-71963404 | Msa0222660:CDS | 35.0% | |
TACCTAAATATTTCCCTAGC+TGG | + | chr2_1:71963390-71963409 | None:intergenic | 35.0% | |
TCACCAGTGAATTTCAAAAC+AGG | - | chr2_1:71963492-71963511 | Msa0222660:CDS | 35.0% | |
!!! | ACACCTGTTTTGAAATTCAC+TGG | + | chr2_1:71963498-71963517 | None:intergenic | 35.0% |
! | GATCATTTTGTTCTTCACAC+TGG | - | chr2_1:71963519-71963538 | Msa0222660:CDS | 35.0% |
AAAGCAGTGATAGATGGAAT+TGG | - | chr2_1:71963546-71963565 | Msa0222660:CDS | 35.0% | |
AAGCAGTGATAGATGGAATT+GGG | - | chr2_1:71963547-71963566 | Msa0222660:CDS | 35.0% | |
CTATGTAATGACATTCTTGC+TGG | + | chr2_1:71963606-71963625 | None:intergenic | 35.0% | |
ATACATCAGCAAGTAGTTTG+TGG | - | chr2_1:71963634-71963653 | Msa0222660:CDS | 35.0% | |
! | AAGTAGTTTGTGGTATGTGT+TGG | - | chr2_1:71963644-71963663 | Msa0222660:CDS | 35.0% |
! | AGTAGTTTGTGGTATGTGTT+GGG | - | chr2_1:71963645-71963664 | Msa0222660:CDS | 35.0% |
GCTAAGAAGAGGTTGAAAAA+AGG | - | chr2_1:71963678-71963697 | Msa0222660:CDS | 35.0% | |
! | TTGATGATAAGTTTAGGTGC+TGG | - | chr2_1:71963711-71963730 | Msa0222660:CDS | 35.0% |
GAAGTAATGAGAGATGTTGT+TGG | - | chr2_1:71963759-71963778 | Msa0222660:CDS | 35.0% | |
CAAATCAGGCATTTCACCTT+CGG | - | chr2_1:71962855-71962874 | Msa0222660:CDS | 40.0% | |
ACAAGAATATCGATCTCCGA+AGG | + | chr2_1:71962874-71962893 | None:intergenic | 40.0% | |
TTCGGAGATCGATATTCTTG+TGG | - | chr2_1:71962873-71962892 | Msa0222660:CDS | 40.0% | |
! | GCAAATTGTCTTTTCCGTAC+CGG | - | chr2_1:71963135-71963154 | Msa0222660:CDS | 40.0% |
!! | AAAGCTCTTGTAGCTGCTTT+TGG | + | chr2_1:71963330-71963349 | None:intergenic | 40.0% |
! | CATTTTGTTCTTCACACTGG+AGG | - | chr2_1:71963522-71963541 | Msa0222660:CDS | 40.0% |
!! | ATGACATTCTTGCTGGTTCT+AGG | + | chr2_1:71963599-71963618 | None:intergenic | 40.0% |
! | GTAGTTTGTGGTATGTGTTG+GGG | - | chr2_1:71963646-71963665 | Msa0222660:CDS | 40.0% |
GGTATATGGAAGCTAAGAAG+AGG | - | chr2_1:71963667-71963686 | Msa0222660:CDS | 40.0% | |
!! | AGAGATGTTGTTGGTGATGA+TGG | - | chr2_1:71963768-71963787 | Msa0222660:CDS | 40.0% |
!! | TTGGTGATGATGGAAATGTG+TGG | - | chr2_1:71963778-71963797 | Msa0222660:CDS | 40.0% |
!! | TGGTGATGATGGAAATGTGT+GGG | - | chr2_1:71963779-71963798 | Msa0222660:CDS | 40.0% |
TTACTATCCACCACACTCTT+TGG | - | chr2_1:71963815-71963834 | Msa0222660:CDS | 40.0% | |
AACCCATTCATGGAGAAGTA+CGG | - | chr2_1:71963840-71963859 | Msa0222660:CDS | 40.0% | |
AACCGTACTTCTCCATGAAT+GGG | + | chr2_1:71963845-71963864 | None:intergenic | 40.0% | |
CAAATCAGGCATTTCACCTT+CGG | - | chr2_1:71962855-71962874 | Msa0222660:CDS | 40.0% | |
ACAAGAATATCGATCTCCGA+AGG | + | chr2_1:71962874-71962893 | None:intergenic | 40.0% | |
TTCGGAGATCGATATTCTTG+TGG | - | chr2_1:71962873-71962892 | Msa0222660:CDS | 40.0% | |
! | GCAAATTGTCTTTTCCGTAC+CGG | - | chr2_1:71963135-71963154 | Msa0222660:CDS | 40.0% |
!! | AAAGCTCTTGTAGCTGCTTT+TGG | + | chr2_1:71963330-71963349 | None:intergenic | 40.0% |
! | CATTTTGTTCTTCACACTGG+AGG | - | chr2_1:71963522-71963541 | Msa0222660:CDS | 40.0% |
!! | ATGACATTCTTGCTGGTTCT+AGG | + | chr2_1:71963599-71963618 | None:intergenic | 40.0% |
! | GTAGTTTGTGGTATGTGTTG+GGG | - | chr2_1:71963646-71963665 | Msa0222660:CDS | 40.0% |
GGTATATGGAAGCTAAGAAG+AGG | - | chr2_1:71963667-71963686 | Msa0222660:CDS | 40.0% | |
!! | AGAGATGTTGTTGGTGATGA+TGG | - | chr2_1:71963768-71963787 | Msa0222660:CDS | 40.0% |
!! | TTGGTGATGATGGAAATGTG+TGG | - | chr2_1:71963778-71963797 | Msa0222660:CDS | 40.0% |
!! | TGGTGATGATGGAAATGTGT+GGG | - | chr2_1:71963779-71963798 | Msa0222660:CDS | 40.0% |
TTACTATCCACCACACTCTT+TGG | - | chr2_1:71963815-71963834 | Msa0222660:CDS | 40.0% | |
AACCCATTCATGGAGAAGTA+CGG | - | chr2_1:71963840-71963859 | Msa0222660:CDS | 40.0% | |
AACCGTACTTCTCCATGAAT+GGG | + | chr2_1:71963845-71963864 | None:intergenic | 40.0% | |
TGCACTTGTGTTTCCTGATC+TGG | - | chr2_1:71962536-71962555 | Msa0222660:CDS | 45.0% | |
! | ACCAATGCCTGAGTTGACAA+CGG | + | chr2_1:71962719-71962738 | None:intergenic | 45.0% |
GCTCCAAGAAACTTCATCGA+AGG | - | chr2_1:71962751-71962770 | Msa0222660:CDS | 45.0% | |
CACTACAACCCATACCAGAT+AGG | + | chr2_1:71962987-71963006 | None:intergenic | 45.0% | |
! | AATTGTCTTTTCCGTACCGG+CGG | - | chr2_1:71963138-71963157 | Msa0222660:CDS | 45.0% |
! | AACCATCTTGCAGCTGACTT+AGG | + | chr2_1:71963456-71963475 | None:intergenic | 45.0% |
AAGTCAGCTGCAAGATGGTT+TGG | - | chr2_1:71963456-71963475 | Msa0222660:CDS | 45.0% | |
GGAGGAAAAGCAGTGATAGA+TGG | - | chr2_1:71963540-71963559 | Msa0222660:CDS | 45.0% | |
GTGGTATGTGTTGGGGTATA+TGG | - | chr2_1:71963653-71963672 | Msa0222660:CDS | 45.0% | |
GTACTTCTCCATGAATGGGT+TGG | + | chr2_1:71963841-71963860 | None:intergenic | 45.0% | |
CAACCGTACTTCTCCATGAA+TGG | + | chr2_1:71963846-71963865 | None:intergenic | 45.0% | |
! | CATTCATGGAGAAGTACGGT+TGG | - | chr2_1:71963844-71963863 | Msa0222660:CDS | 45.0% |
TGCACTTGTGTTTCCTGATC+TGG | - | chr2_1:71962536-71962555 | Msa0222660:CDS | 45.0% | |
! | ACCAATGCCTGAGTTGACAA+CGG | + | chr2_1:71962719-71962738 | None:intergenic | 45.0% |
GCTCCAAGAAACTTCATCGA+AGG | - | chr2_1:71962751-71962770 | Msa0222660:CDS | 45.0% | |
CACTACAACCCATACCAGAT+AGG | + | chr2_1:71962987-71963006 | None:intergenic | 45.0% | |
! | AATTGTCTTTTCCGTACCGG+CGG | - | chr2_1:71963138-71963157 | Msa0222660:CDS | 45.0% |
! | AACCATCTTGCAGCTGACTT+AGG | + | chr2_1:71963456-71963475 | None:intergenic | 45.0% |
AAGTCAGCTGCAAGATGGTT+TGG | - | chr2_1:71963456-71963475 | Msa0222660:CDS | 45.0% | |
GGAGGAAAAGCAGTGATAGA+TGG | - | chr2_1:71963540-71963559 | Msa0222660:CDS | 45.0% | |
GTGGTATGTGTTGGGGTATA+TGG | - | chr2_1:71963653-71963672 | Msa0222660:CDS | 45.0% | |
GTACTTCTCCATGAATGGGT+TGG | + | chr2_1:71963841-71963860 | None:intergenic | 45.0% | |
CAACCGTACTTCTCCATGAA+TGG | + | chr2_1:71963846-71963865 | None:intergenic | 45.0% | |
! | CATTCATGGAGAAGTACGGT+TGG | - | chr2_1:71963844-71963863 | Msa0222660:CDS | 45.0% |
! | CTGAGTTGACAACGGCTTTG+AGG | + | chr2_1:71962711-71962730 | None:intergenic | 50.0% |
CTCAAAGCCGTTGTCAACTC+AGG | - | chr2_1:71962709-71962728 | Msa0222660:CDS | 50.0% | |
!! | TGTCAACTCAGGCATTGGTG+AGG | - | chr2_1:71962720-71962739 | Msa0222660:CDS | 50.0% |
CGGCCTTCGATGAAGTTTCT+TGG | + | chr2_1:71962757-71962776 | None:intergenic | 50.0% | |
CCATCGTTGGGTTCACAGTT+CGG | + | chr2_1:71962777-71962796 | None:intergenic | 50.0% | |
CCACTTCGTCTTCCATCGTT+GGG | + | chr2_1:71962789-71962808 | None:intergenic | 50.0% | |
TCCACTTCGTCTTCCATCGT+TGG | + | chr2_1:71962790-71962809 | None:intergenic | 50.0% | |
AACGATGGAAGACGAAGTGG+AGG | - | chr2_1:71962789-71962808 | Msa0222660:CDS | 50.0% | |
GGAAGACGAAGTGGAGGAAA+TGG | - | chr2_1:71962795-71962814 | Msa0222660:CDS | 50.0% | |
GAGAAGAATTGCACAACCGC+CGG | + | chr2_1:71963157-71963176 | None:intergenic | 50.0% | |
CTCCTAAGTCAGCTGCAAGA+TGG | - | chr2_1:71963451-71963470 | Msa0222660:CDS | 50.0% | |
!! | AATGGGTTGGCCAAAGAGTG+TGG | + | chr2_1:71963828-71963847 | None:intergenic | 50.0% |
CTCTTTGGCCAACCCATTCA+TGG | - | chr2_1:71963830-71963849 | Msa0222660:CDS | 50.0% | |
! | CTGAGTTGACAACGGCTTTG+AGG | + | chr2_1:71962711-71962730 | None:intergenic | 50.0% |
CTCAAAGCCGTTGTCAACTC+AGG | - | chr2_1:71962709-71962728 | Msa0222660:CDS | 50.0% | |
!! | TGTCAACTCAGGCATTGGTG+AGG | - | chr2_1:71962720-71962739 | Msa0222660:CDS | 50.0% |
CGGCCTTCGATGAAGTTTCT+TGG | + | chr2_1:71962757-71962776 | None:intergenic | 50.0% | |
CCATCGTTGGGTTCACAGTT+CGG | + | chr2_1:71962777-71962796 | None:intergenic | 50.0% | |
CCACTTCGTCTTCCATCGTT+GGG | + | chr2_1:71962789-71962808 | None:intergenic | 50.0% | |
TCCACTTCGTCTTCCATCGT+TGG | + | chr2_1:71962790-71962809 | None:intergenic | 50.0% | |
AACGATGGAAGACGAAGTGG+AGG | - | chr2_1:71962789-71962808 | Msa0222660:CDS | 50.0% | |
GGAAGACGAAGTGGAGGAAA+TGG | - | chr2_1:71962795-71962814 | Msa0222660:CDS | 50.0% | |
GAGAAGAATTGCACAACCGC+CGG | + | chr2_1:71963157-71963176 | None:intergenic | 50.0% | |
CTCCTAAGTCAGCTGCAAGA+TGG | - | chr2_1:71963451-71963470 | Msa0222660:CDS | 50.0% | |
!! | AATGGGTTGGCCAAAGAGTG+TGG | + | chr2_1:71963828-71963847 | None:intergenic | 50.0% |
CTCTTTGGCCAACCCATTCA+TGG | - | chr2_1:71963830-71963849 | Msa0222660:CDS | 50.0% | |
GCCGTTGTCAACTCAGGCAT+TGG | - | chr2_1:71962715-71962734 | Msa0222660:CDS | 55.0% | |
CCGAACTGTGAACCCAACGA+TGG | - | chr2_1:71962774-71962793 | Msa0222660:CDS | 55.0% | |
CCCAACGATGGAAGACGAAG+TGG | - | chr2_1:71962786-71962805 | Msa0222660:CDS | 55.0% | |
GAATTGCACAACCGCCGGTA+CGG | + | chr2_1:71963152-71963171 | None:intergenic | 55.0% | |
GCCGTTGTCAACTCAGGCAT+TGG | - | chr2_1:71962715-71962734 | Msa0222660:CDS | 55.0% | |
CCGAACTGTGAACCCAACGA+TGG | - | chr2_1:71962774-71962793 | Msa0222660:CDS | 55.0% | |
CCCAACGATGGAAGACGAAG+TGG | - | chr2_1:71962786-71962805 | Msa0222660:CDS | 55.0% | |
GAATTGCACAACCGCCGGTA+CGG | + | chr2_1:71963152-71963171 | None:intergenic | 55.0% | |
!! | GGGTTGGCCAAAGAGTGTGG+TGG | + | chr2_1:71963825-71963844 | None:intergenic | 60.0% |
!! | GGGTTGGCCAAAGAGTGTGG+TGG | + | chr2_1:71963825-71963844 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 71962535 | 71963935 | 71962535 | ID=Msa0222660;Name=Msa0222660 |
chr2_1 | mRNA | 71962535 | 71963935 | 71962535 | ID=Msa0222660-mRNA-1;Parent=Msa0222660;Name=Msa0222660-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|-1|0|1|-1|1|1|0|466 |
chr2_1 | exon | 71962535 | 71963935 | 71962535 | ID=Msa0222660-mRNA-1:exon:20758;Parent=Msa0222660-mRNA-1 |
chr2_1 | CDS | 71962535 | 71963935 | 71962535 | ID=Msa0222660-mRNA-1:cds;Parent=Msa0222660-mRNA-1 |
Gene Sequence |
Protein sequence |