AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0845940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0845940 MtrunA17_Chr5g0417621 94.774 421 16 3 22 438 23 441 0.0 832
Msa0845940 MtrunA17_Chr4g0042501 57.895 399 136 14 22 405 1 382 2.84e-136 397
Msa0845940 MtrunA17_Chr7g0254261 80.833 120 23 0 126 245 82 201 8.02e-67 217
Msa0845940 MtrunA17_Chr3g0125801 79.508 122 24 1 131 252 14 134 1.74e-61 201
Msa0845940 MtrunA17_Chr6g0480581 66.917 133 43 1 131 262 2 134 1.18e-59 195
Msa0845940 MtrunA17_Chr6g0460671 49.754 203 92 3 98 290 61 263 1.53e-58 195
Msa0845940 MtrunA17_Chr6g0460661 53.077 130 60 1 125 253 8 137 4.60e-45 154
Msa0845940 MtrunA17_Chr4g0008551 57.843 102 43 0 132 233 37 138 7.97e-39 143
Msa0845940 MtrunA17_Chr5g0401731 56.436 101 44 0 133 233 15 115 4.92e-38 140
Msa0845940 MtrunA17_Chr4g0053431 57.426 101 43 0 133 233 5 105 2.29e-37 137
Msa0845940 MtrunA17_Chr6g0454921 54.455 101 46 0 133 233 15 115 1.37e-35 130
Msa0845940 MtrunA17_Chr7g0238631 57.282 103 44 0 132 234 112 214 3.15e-34 134
Msa0845940 MtrunA17_Chr3g0133601 54.455 101 46 0 133 233 37 137 2.00e-33 125
Msa0845940 MtrunA17_Chr5g0437321 50.877 114 52 2 114 227 4 113 2.55e-32 124
Msa0845940 MtrunA17_Chr1g0157731 42.553 141 73 2 132 272 90 222 8.52e-32 128
Msa0845940 MtrunA17_Chr3g0139671 50.980 102 50 0 133 234 85 186 7.69e-31 125
Msa0845940 MtrunA17_Chr5g0429661 47.500 120 63 0 114 233 103 222 3.97e-30 119
Msa0845940 MtrunA17_Chr4g0058991 45.038 131 68 2 132 258 208 338 5.43e-29 118
Msa0845940 MtrunA17_Chr3g0117511 40.816 147 83 2 116 258 166 312 1.75e-27 114
Msa0845940 MtrunA17_Chr5g0397841 54.348 92 42 0 136 227 113 204 6.68e-27 112
Msa0845940 MtrunA17_Chr2g0309911 47.273 110 55 2 130 237 10 118 2.23e-26 108
Msa0845940 MtrunA17_Chr2g0323351 45.133 113 59 2 133 243 14 125 2.96e-26 106
Msa0845940 MtrunA17_Chr1g0187761 41.860 129 72 2 133 259 14 141 4.26e-26 106
Msa0845940 MtrunA17_Chr3g0103281 46.078 102 54 1 133 233 14 115 4.91e-26 107
Msa0845940 MtrunA17_Chr4g0022901 49.515 103 49 2 133 233 15 116 5.86e-26 106
Msa0845940 MtrunA17_Chr4g0022931 40.441 136 78 2 127 260 9 143 1.03e-25 105
Msa0845940 MtrunA17_Chr2g0311221 49.505 101 50 1 129 228 12 112 1.06e-25 107
Msa0845940 MtrunA17_Chr6g0470971 43.519 108 60 1 127 233 10 117 1.93e-25 105
Msa0845940 MtrunA17_Chr4g0022911 49.515 103 49 2 133 233 15 116 2.45e-25 105
Msa0845940 MtrunA17_Chr7g0228531 49.505 101 50 1 133 233 220 319 3.20e-25 107
Msa0845940 MtrunA17_Chr4g0030881 45.872 109 51 2 133 233 9 117 9.51e-25 102
Msa0845940 MtrunA17_Chr8g0387421 43.590 117 60 2 126 236 2 118 1.29e-24 103
Msa0845940 MtrunA17_Chr7g0220341 40.650 123 68 2 114 233 10 130 1.46e-24 102
Msa0845940 MtrunA17_Chr4g0055981 42.157 102 58 1 133 233 57 158 1.58e-24 101
Msa0845940 MtrunA17_Chr4g0048511 39.189 148 73 3 122 268 8 139 1.59e-24 103
Msa0845940 MtrunA17_Chr3g0088461 42.735 117 66 1 120 235 11 127 2.17e-24 103
Msa0845940 MtrunA17_Chr8g0342541 46.226 106 54 2 130 233 11 115 2.20e-24 103
Msa0845940 MtrunA17_Chr1g0203411 36.145 166 85 4 133 278 14 178 2.29e-24 102
Msa0845940 MtrunA17_Chr5g0417821 45.098 102 55 1 133 233 9 110 2.62e-24 102
Msa0845940 MtrunA17_Chr3g0099131 42.727 110 62 1 133 241 43 152 3.32e-24 105
Msa0845940 MtrunA17_Chr8g0360111 46.000 100 53 1 133 231 27 126 3.42e-24 101
Msa0845940 MtrunA17_Chr3g0115821 44.828 116 56 3 126 234 2 116 3.58e-24 102
Msa0845940 MtrunA17_Chr1g0211161 42.727 110 60 2 130 237 12 120 4.34e-24 100
Msa0845940 MtrunA17_Chr7g0274581 43.810 105 58 1 133 236 14 118 4.40e-24 99.4
Msa0845940 MtrunA17_Chr7g0228891 46.667 105 53 2 133 235 14 117 4.59e-24 100
Msa0845940 MtrunA17_Chr1g0193371 42.202 109 60 2 130 236 11 118 7.49e-24 102
Msa0845940 MtrunA17_Chr3g0117091 42.727 110 60 2 130 237 11 119 7.52e-24 102
Msa0845940 MtrunA17_Chr4g0070611 34.132 167 100 4 126 282 2 168 8.04e-24 101
Msa0845940 MtrunA17_Chr7g0270891 41.284 109 63 1 130 237 11 119 8.04e-24 102
Msa0845940 MtrunA17_Chr1g0209661 36.025 161 87 4 118 267 19 174 9.53e-24 100
Msa0845940 MtrunA17_Chr5g0434911 43.137 102 57 1 133 233 23 124 1.02e-23 100
Msa0845940 MtrunA17_Chr8g0342521 45.283 106 55 2 130 233 11 115 1.02e-23 101
Msa0845940 MtrunA17_Chr5g0397231 48.980 98 49 1 130 226 11 108 1.10e-23 101
Msa0845940 MtrunA17_Chr2g0327821 43.925 107 57 2 133 237 8 113 1.32e-23 99.0
Msa0845940 MtrunA17_Chr5g0434841 44.118 102 56 1 133 233 22 123 1.40e-23 100
Msa0845940 MtrunA17_Chr1g0203441 42.857 105 59 1 130 233 12 116 1.47e-23 99.8
Msa0845940 MtrunA17_Chr2g0330041 46.226 106 54 2 130 233 11 115 1.85e-23 101
Msa0845940 MtrunA17_Chr7g0228991 32.941 170 99 4 133 299 31 188 2.19e-23 99.4
Msa0845940 MtrunA17_Chr8g0342481 46.226 106 55 1 130 233 11 116 2.52e-23 101
Msa0845940 MtrunA17_Chr5g0400821 35.227 176 99 6 133 297 14 185 2.93e-23 99.8
Msa0845940 MtrunA17_Chr4g0058631 40.367 109 64 1 130 237 11 119 3.01e-23 100
Msa0845940 MtrunA17_Chr1g0193801 40.367 109 64 1 130 237 11 119 3.09e-23 100
Msa0845940 MtrunA17_Chr8g0354661 37.748 151 85 3 111 253 11 160 3.16e-23 102
Msa0845940 MtrunA17_Chr4g0032401 40.164 122 69 2 118 238 7 125 3.51e-23 99.8
Msa0845940 MtrunA17_Chr4g0070641 40.171 117 64 2 126 236 2 118 3.54e-23 95.9
Msa0845940 MtrunA17_Chr1g0154031 45.946 111 57 2 133 241 78 187 3.57e-23 100
Msa0845940 MtrunA17_Chr5g0434831 42.157 102 58 1 133 233 9 110 6.08e-23 95.9
Msa0845940 MtrunA17_Chr7g0228481 50.000 96 47 1 133 228 220 314 6.72e-23 100
Msa0845940 MtrunA17_Chr5g0435101 45.192 104 54 2 133 234 13 115 6.91e-23 96.3
Msa0845940 MtrunA17_Chr6g0452271 45.098 102 55 1 133 233 14 115 6.97e-23 99.0
Msa0845940 MtrunA17_Chr2g0328771 42.727 110 60 2 133 240 22 130 7.76e-23 98.6
Msa0845940 MtrunA17_Chr8g0343831 38.889 108 65 1 133 239 10 117 8.26e-23 97.1
Msa0845940 MtrunA17_Chr1g0192411 38.710 124 68 2 113 235 1 117 8.69e-23 99.8
Msa0845940 MtrunA17_Chr4g0022891 39.496 119 64 3 133 244 14 131 8.71e-23 96.7
Msa0845940 MtrunA17_Chr2g0281071 43.363 113 59 2 122 233 8 116 9.39e-23 99.0
Msa0845940 MtrunA17_Chr7g0271241 46.000 100 51 2 130 227 11 109 9.42e-23 99.4
Msa0845940 MtrunA17_Chr5g0434931 42.157 102 58 1 133 233 37 138 9.63e-23 97.4
Msa0845940 MtrunA17_Chr5g0410961 42.105 114 60 2 126 233 2 115 9.76e-23 98.6
Msa0845940 MtrunA17_Chr4g0037141 42.241 116 59 3 126 234 2 116 1.42e-22 97.1
Msa0845940 MtrunA17_Chr2g0323411 45.283 106 57 1 129 233 10 115 1.47e-22 97.8
Msa0845940 MtrunA17_Chr5g0395281 39.098 133 75 3 129 256 10 141 2.05e-22 97.1
Msa0845940 MtrunA17_Chr1g0167691 39.098 133 74 3 133 259 14 145 2.99e-22 95.5
Msa0845940 MtrunA17_Chr3g0131121 43.269 104 56 2 133 234 14 116 3.14e-22 96.3
Msa0845940 MtrunA17_Chr4g0039971 39.098 133 75 3 129 256 11 142 3.24e-22 97.4
Msa0845940 MtrunA17_Chr1g0186061 41.818 110 61 2 133 240 22 130 4.98e-22 95.1
Msa0845940 MtrunA17_Chr1g0151941 44.340 106 57 2 130 233 11 116 5.18e-22 94.7
Msa0845940 MtrunA17_Chr3g0080861 43.243 111 60 2 133 241 39 148 5.50e-22 98.2
Msa0845940 MtrunA17_Chr7g0261281 44.231 104 55 2 133 234 14 116 8.47e-22 94.7
Msa0845940 MtrunA17_Chr8g0346561 39.474 114 63 2 126 233 2 115 9.78e-22 95.1
Msa0845940 MtrunA17_Chr7g0217221 40.367 109 64 1 133 240 14 122 1.06e-21 94.4
Msa0845940 MtrunA17_Chr1g0167661 33.540 161 100 3 133 287 14 173 1.10e-21 94.0
Msa0845940 MtrunA17_Chr1g0180391 41.441 111 62 2 133 241 21 130 1.17e-21 93.2
Msa0845940 MtrunA17_Chr7g0228401 44.660 103 56 1 144 246 290 391 1.29e-21 97.1
Msa0845940 MtrunA17_Chr4g0022881 43.299 97 52 2 133 227 14 109 1.53e-21 92.8
Msa0845940 MtrunA17_Chr1g0194301 40.566 106 60 2 133 236 35 139 1.88e-21 94.0
Msa0845940 MtrunA17_Chr3g0135311 39.344 122 67 3 133 247 14 135 1.89e-21 95.1
Msa0845940 MtrunA17_Chr8g0334881 50.000 96 46 2 133 226 12 107 2.24e-21 94.4
Msa0845940 MtrunA17_Chr1g0168661 44.660 103 54 2 133 233 23 124 2.47e-21 93.2
Msa0845940 MtrunA17_Chr7g0275911 37.288 118 68 2 126 237 2 119 2.98e-21 92.8
Msa0845940 MtrunA17_Chr3g0121241 39.623 106 63 1 133 237 44 149 3.39e-21 93.6
Msa0845940 MtrunA17_Chr1g0152011 36.641 131 77 3 133 257 14 144 5.83e-21 93.6
Msa0845940 MtrunA17_Chr7g0240821 40.171 117 67 2 136 250 6 121 7.39e-21 90.9
Msa0845940 MtrunA17_Chr2g0322521 42.188 128 71 2 110 235 8 134 9.75e-21 93.6
Msa0845940 MtrunA17_Chr1g0194291 37.500 120 70 2 118 236 12 127 9.77e-21 91.7
Msa0845940 MtrunA17_Chr4g0054391 39.837 123 68 3 133 249 14 136 1.64e-20 91.3
Msa0845940 MtrunA17_Chr8g0385321 42.157 102 58 1 133 233 14 115 1.78e-20 91.7
Msa0845940 MtrunA17_Chr7g0228231 37.607 117 72 1 121 236 4 120 1.87e-20 89.4
Msa0845940 MtrunA17_Chr4g0060721 41.818 110 62 2 133 240 15 124 2.03e-20 92.0
Msa0845940 MtrunA17_Chr4g0028311 41.121 107 61 2 129 233 10 116 2.40e-20 91.7
Msa0845940 MtrunA17_Chr1g0177901 46.988 83 44 0 144 226 5 87 2.98e-20 89.0
Msa0845940 MtrunA17_Chr1g0194951 40.870 115 60 3 126 233 2 115 3.99e-20 91.7
Msa0845940 MtrunA17_Chr4g0057031 43.269 104 56 2 133 234 14 116 4.45e-20 89.7
Msa0845940 MtrunA17_Chr4g0013361 41.085 129 60 4 133 259 12 126 4.80e-20 90.1
Msa0845940 MtrunA17_Chr4g0044421 34.965 143 83 3 133 267 14 154 5.19e-20 87.8
Msa0845940 MtrunA17_Chr6g0450101 38.983 118 69 2 121 236 4 120 6.44e-20 87.8
Msa0845940 MtrunA17_Chr8g0349261 44.762 105 54 3 133 234 15 118 1.06e-19 89.0
Msa0845940 MtrunA17_Chr7g0233061 37.705 122 73 3 127 248 174 292 1.20e-19 90.1
Msa0845940 MtrunA17_Chr2g0327351 42.857 98 54 2 133 228 14 111 1.42e-19 89.4
Msa0845940 MtrunA17_Chr7g0254411 40.367 109 64 1 133 240 14 122 1.69e-19 89.4
Msa0845940 MtrunA17_Chr7g0264641 40.777 103 59 2 133 233 14 116 1.70e-19 88.2
Msa0845940 MtrunA17_Chr6g0453211 42.268 97 55 1 133 228 14 110 1.70e-19 89.0
Msa0845940 MtrunA17_Chr5g0441131 37.391 115 67 3 128 240 6 117 2.16e-19 85.5
Msa0845940 MtrunA17_Chr3g0110351 37.302 126 76 2 133 256 14 138 2.21e-19 88.6
Msa0845940 MtrunA17_Chr7g0247131 50.633 79 37 1 159 235 5 83 2.29e-19 87.8
Msa0845940 MtrunA17_Chr6g0453471 38.261 115 65 2 126 234 2 116 2.72e-19 89.0
Msa0845940 MtrunA17_Chr7g0217741 39.655 116 62 3 126 234 2 116 3.77e-19 87.8
Msa0845940 MtrunA17_Chr4g0042671 38.261 115 65 2 126 234 2 116 3.81e-19 89.0
Msa0845940 MtrunA17_Chr4g0072751 42.857 98 54 2 133 228 14 111 4.48e-19 88.2
Msa0845940 MtrunA17_Chr5g0434571 41.509 106 59 2 133 236 50 154 6.32e-19 87.8
Msa0845940 MtrunA17_Chr5g0440781 42.453 106 54 4 133 235 14 115 6.63e-19 84.3
Msa0845940 MtrunA17_Chr3g0092401 39.048 105 63 1 133 236 15 119 7.18e-19 87.0
Msa0845940 MtrunA17_Chr5g0416341 33.333 105 70 0 136 240 29 133 7.56e-19 88.6
Msa0845940 MtrunA17_Chr5g0441141 39.450 109 61 3 129 235 10 115 1.05e-18 85.9
Msa0845940 MtrunA17_Chr5g0440761 40.952 105 57 3 133 235 14 115 1.14e-18 85.5
Msa0845940 MtrunA17_Chr6g0487491 33.537 164 94 4 129 282 10 168 1.91e-18 84.7
Msa0845940 MtrunA17_Chr8g0362231 32.090 134 88 1 121 251 7 140 1.95e-18 87.0
Msa0845940 MtrunA17_Chr4g0068061 29.677 155 91 2 133 269 14 168 2.81e-18 85.5
Msa0845940 MtrunA17_Chr5g0434901 51.613 62 30 0 166 227 9 70 6.71e-18 79.3
Msa0845940 MtrunA17_Chr4g0068921 43.299 97 54 1 133 228 26 122 6.90e-18 81.6
Msa0845940 MtrunA17_Chr7g0238651 36.842 114 69 1 133 243 7 120 2.02e-17 83.6
Msa0845940 MtrunA17_Chr2g0293911 40.000 105 62 1 133 236 26 130 2.68e-17 82.8
Msa0845940 MtrunA17_Chr3g0099141 42.683 82 46 1 133 213 42 123 5.66e-16 74.7
Msa0845940 MtrunA17_Chr7g0229101 49.206 63 32 0 166 228 8 70 6.23e-16 76.3
Msa0845940 MtrunA17_Chr7g0229131 46.032 63 34 0 166 228 8 70 1.59e-14 71.2
Msa0845940 MtrunA17_Chr3g0093811 44.444 72 38 2 166 236 18 88 2.01e-14 73.2
Msa0845940 MtrunA17_Chr7g0269831 40.385 104 59 2 133 234 14 116 4.00e-14 73.6
Msa0845940 MtrunA17_Chr6g0483051 37.363 91 56 1 136 226 72 161 5.80e-14 73.9
Msa0845940 MtrunA17_Chr6g0483051 29.496 139 95 2 133 269 120 257 3.90e-12 68.2
Msa0845940 MtrunA17_Chr8g0342531 42.500 80 43 2 130 207 11 89 7.81e-14 69.3
Msa0845940 MtrunA17_Chr8g0342511 43.590 78 41 2 130 205 11 87 9.92e-14 67.0
Msa0845940 MtrunA17_Chr5g0395221 42.169 83 46 2 125 206 7 88 1.29e-13 66.2
Msa0845940 MtrunA17_Chr5g0425591 42.683 82 43 3 133 211 11 91 1.46e-13 66.2
Msa0845940 MtrunA17_Chr8g0342461 42.857 77 42 1 133 207 14 90 4.17e-13 66.6
Msa0845940 MtrunA17_Chr2g0323321 41.250 80 44 2 133 210 13 91 5.49e-13 65.5
Msa0845940 MtrunA17_Chr4g0042611 38.462 78 47 1 130 206 11 88 6.61e-13 64.3
Msa0845940 MtrunA17_Chr8g0342471 41.558 77 43 1 133 207 14 90 1.77e-12 64.7
Msa0845940 MtrunA17_Chr5g0421201 36.471 85 51 2 185 266 12 96 6.96e-12 63.9
Msa0845940 MtrunA17_Chr7g0233151 41.176 68 37 1 183 250 1 65 9.28e-12 63.5
Msa0845940 MtrunA17_Chr3g0104501 48.438 64 33 0 120 183 120 183 1.44e-11 63.5
Msa0845940 MtrunA17_Chr7g0274481 37.647 85 52 1 134 218 8 91 1.81e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0845940 AT1G69560.2 53.725 255 89 4 16 258 11 248 2.59e-80 252
Msa0845940 AT1G69560.1 54.217 249 85 4 22 258 1 232 8.89e-80 250
Msa0845940 AT1G26780.1 89.831 118 12 0 132 249 97 214 4.15e-75 236
Msa0845940 AT1G26780.2 89.831 118 12 0 132 249 97 214 1.70e-74 238
Msa0845940 AT5G17800.1 83.019 106 18 0 131 236 91 196 1.19e-61 203
Msa0845940 AT3G29020.1 73.504 117 31 0 128 244 60 176 1.43e-61 200
Msa0845940 AT3G29020.2 73.504 117 31 0 128 244 62 178 5.50e-61 201
Msa0845940 AT1G17950.1 76.106 113 27 0 131 243 3 115 7.07e-60 196
Msa0845940 AT1G73410.1 80.556 108 21 0 131 238 4 111 6.19e-57 188
Msa0845940 AT1G73410.2 80.556 108 21 0 131 238 4 111 2.08e-56 185
Msa0845940 AT4G33450.1 61.871 139 52 1 124 262 11 148 1.69e-55 184
Msa0845940 AT5G39700.1 64.486 107 38 0 134 240 57 163 5.13e-46 158
Msa0845940 AT2G39880.1 45.161 155 82 1 120 274 37 188 9.90e-39 144
Msa0845940 AT5G67300.1 41.053 190 87 5 133 311 6 181 1.93e-37 139
Msa0845940 AT3G55730.1 54.286 105 48 0 132 236 55 159 2.07e-36 138
Msa0845940 AT4G37260.1 56.436 101 44 0 133 233 13 113 2.14e-36 136
Msa0845940 AT2G23290.1 56.436 101 44 0 133 233 13 113 9.56e-36 134
Msa0845940 AT3G09230.1 54.369 103 47 0 132 234 54 156 8.06e-35 134
Msa0845940 AT3G50060.1 53.922 102 47 0 132 233 5 106 8.74e-34 129
Msa0845940 AT3G09370.1 56.436 101 44 0 133 233 130 230 4.76e-33 130
Msa0845940 AT3G09370.2 56.436 101 44 0 133 233 135 235 5.22e-33 130
Msa0845940 AT3G09370.3 56.436 101 44 0 133 233 143 243 8.28e-33 130
Msa0845940 AT5G02320.1 54.902 102 46 0 132 233 126 227 2.41e-32 129
Msa0845940 AT5G02320.2 54.902 102 46 0 132 233 126 227 2.41e-32 129
Msa0845940 AT5G02320.3 54.902 102 46 0 132 233 66 167 2.59e-32 128
Msa0845940 AT5G11510.3 49.020 102 52 0 132 233 80 181 6.26e-30 123
Msa0845940 AT5G11510.1 49.020 102 52 0 132 233 80 181 6.26e-30 123
Msa0845940 AT5G11510.4 49.020 102 52 0 132 233 80 181 6.26e-30 123
Msa0845940 AT5G11510.2 49.020 102 52 0 132 233 80 181 6.60e-30 123
Msa0845940 AT5G11510.5 49.020 102 52 0 132 233 80 181 7.10e-30 123
Msa0845940 AT5G58850.1 43.704 135 72 1 128 262 100 230 1.52e-29 119
Msa0845940 AT4G32730.5 48.544 103 53 0 132 234 86 188 1.78e-29 122
Msa0845940 AT4G32730.4 48.544 103 53 0 132 234 86 188 1.78e-29 122
Msa0845940 AT4G32730.3 48.544 103 53 0 132 234 86 188 1.78e-29 122
Msa0845940 AT4G32730.2 48.544 103 53 0 132 234 86 188 1.78e-29 122
Msa0845940 AT4G32730.1 48.544 103 53 0 132 234 86 188 1.87e-29 122
Msa0845940 AT5G11050.1 48.333 120 57 2 133 252 105 219 9.48e-29 117
Msa0845940 AT2G25230.1 46.729 107 55 2 127 232 20 125 1.02e-28 113
Msa0845940 AT3G27785.1 42.975 121 69 0 127 247 183 303 2.89e-28 116
Msa0845940 AT3G12720.1 49.091 110 53 2 130 237 21 129 1.37e-27 112
Msa0845940 AT5G40360.1 42.500 120 66 1 124 243 149 265 8.29e-27 110
Msa0845940 AT4G18770.1 39.726 146 79 2 127 263 211 356 8.95e-27 112
Msa0845940 AT5G40330.1 43.636 110 61 1 125 233 6 115 1.14e-26 107
Msa0845940 AT5G14750.1 46.078 102 54 1 133 233 18 119 1.79e-26 106
Msa0845940 AT1G79180.1 46.429 112 57 2 129 238 12 122 4.94e-26 107
Msa0845940 AT3G27920.1 41.228 114 66 1 121 233 4 117 8.74e-26 105
Msa0845940 AT3G28470.1 47.525 101 52 1 129 228 10 110 1.31e-25 106
Msa0845940 AT2G26960.1 42.742 124 70 1 119 241 8 131 2.13e-25 108
Msa0845940 AT4G28110.1 43.478 115 59 2 126 234 2 116 3.34e-25 104
Msa0845940 AT4G26930.1 42.400 125 71 1 118 241 6 130 4.23e-25 106
Msa0845940 AT4G25560.1 43.519 108 60 1 133 239 12 119 4.41e-25 104
Msa0845940 AT1G63910.1 43.697 119 66 1 130 247 11 129 7.33e-25 105
Msa0845940 AT5G54230.1 46.078 102 54 1 133 233 14 115 1.37e-24 103
Msa0845940 AT5G65230.1 47.115 104 52 2 133 234 14 116 2.61e-24 102
Msa0845940 AT3G23250.1 43.810 105 58 1 133 236 14 118 2.87e-24 102
Msa0845940 AT4G05100.1 43.478 115 58 2 126 233 2 116 3.35e-24 102
Msa0845940 AT5G10280.1 39.231 130 76 2 129 256 10 138 4.39e-24 102
Msa0845940 AT3G30210.1 39.062 128 72 3 131 256 27 150 6.38e-24 101
Msa0845940 AT3G53200.1 42.017 119 55 3 133 249 11 117 7.06e-24 100
Msa0845940 AT1G18570.1 45.631 103 55 1 133 234 15 117 7.94e-24 102
Msa0845940 AT1G09540.1 37.857 140 77 3 130 267 11 142 9.30e-24 102
Msa0845940 AT3G48920.1 46.875 96 50 1 133 227 20 115 1.18e-23 100
Msa0845940 AT3G11440.2 42.342 111 63 1 126 235 36 146 1.18e-23 103
Msa0845940 AT3G13890.2 36.552 145 91 1 130 273 11 155 1.26e-23 102
Msa0845940 AT4G01680.1 42.056 107 61 1 130 235 11 117 1.40e-23 101
Msa0845940 AT2G31180.1 36.875 160 86 3 133 290 14 160 1.49e-23 99.4
Msa0845940 AT4G01680.3 42.056 107 61 1 130 235 11 117 1.52e-23 99.4
Msa0845940 AT5G60890.1 42.453 106 60 1 133 237 14 119 1.53e-23 100
Msa0845940 AT5G56110.1 45.631 103 55 1 133 234 14 116 1.63e-23 100
Msa0845940 AT5G12870.1 40.870 115 67 1 127 240 14 128 1.65e-23 100
Msa0845940 AT1G56160.1 43.925 107 57 2 129 233 12 117 1.74e-23 100
Msa0845940 AT3G11440.3 39.098 133 75 2 104 235 19 146 2.08e-23 103
Msa0845940 AT3G11440.4 39.098 133 75 2 104 235 19 146 2.08e-23 103
Msa0845940 AT3G11440.1 39.098 133 75 2 104 235 19 146 2.08e-23 103
Msa0845940 AT3G46130.1 44.860 107 56 2 133 237 11 116 2.38e-23 99.0
Msa0845940 AT2G26950.1 42.857 105 56 2 132 235 17 118 2.82e-23 101
Msa0845940 AT5G59780.3 43.925 107 57 2 133 237 10 115 2.90e-23 98.2
Msa0845940 AT3G12820.1 45.370 108 56 2 129 234 12 118 3.25e-23 98.2
Msa0845940 AT5G26660.1 42.727 110 60 2 130 237 11 119 3.48e-23 100
Msa0845940 AT5G52600.1 43.396 106 59 1 129 233 10 115 4.27e-23 97.1
Msa0845940 AT5G40430.1 40.566 106 62 1 127 232 48 152 4.43e-23 98.2
Msa0845940 AT3G13890.1 35.065 154 90 2 130 273 11 164 6.71e-23 100
Msa0845940 AT4G00540.2 45.794 107 55 1 133 236 103 209 6.91e-23 100
Msa0845940 AT1G57560.1 41.818 110 61 2 130 237 11 119 6.92e-23 99.0
Msa0845940 AT1G57560.2 41.818 110 61 2 130 237 11 119 8.31e-23 97.8
Msa0845940 AT2G32460.1 44.144 111 59 2 133 241 20 129 9.43e-23 100
Msa0845940 AT2G32460.2 44.144 111 59 2 133 241 8 117 1.09e-22 100
Msa0845940 AT1G79180.2 37.500 144 56 2 129 238 12 155 1.34e-22 98.6
Msa0845940 AT5G14340.1 44.762 105 55 2 133 235 26 129 1.41e-22 97.4
Msa0845940 AT4G00540.1 45.794 107 55 1 133 236 101 207 1.55e-22 99.8
Msa0845940 AT4G00540.1 30.435 138 87 2 99 227 10 147 3.10e-11 65.5
Msa0845940 AT5G06100.1 39.370 127 69 2 117 235 11 137 1.58e-22 99.8
Msa0845940 AT1G16490.1 41.964 112 62 2 129 238 12 122 1.60e-22 97.1
Msa0845940 AT5G16770.4 37.857 140 78 3 126 256 2 141 1.68e-22 98.2
Msa0845940 AT5G16770.3 37.857 140 78 3 126 256 2 141 1.68e-22 98.2
Msa0845940 AT4G38620.1 42.241 116 59 3 126 234 2 116 1.80e-22 97.1
Msa0845940 AT1G06180.1 44.231 104 55 2 133 234 14 116 2.01e-22 96.3
Msa0845940 AT5G16770.1 37.857 140 78 3 126 256 2 141 2.18e-22 97.8
Msa0845940 AT5G16770.2 37.857 140 78 3 126 256 2 141 2.18e-22 97.8
Msa0845940 AT1G35515.1 39.474 114 63 2 126 233 2 115 3.28e-22 94.7
Msa0845940 AT4G17785.2 42.017 119 66 2 120 236 2 119 3.37e-22 97.8
Msa0845940 AT4G17785.1 42.017 119 66 2 120 236 2 119 3.39e-22 97.8
Msa0845940 AT5G06100.5 39.370 127 69 2 117 235 11 137 3.41e-22 99.4
Msa0845940 AT5G06100.2 39.370 127 69 2 117 235 11 137 3.41e-22 99.4
Msa0845940 AT5G06100.3 39.370 127 69 2 117 235 11 137 3.41e-22 99.4
Msa0845940 AT5G06100.4 39.370 127 69 2 117 235 11 137 3.41e-22 99.4
Msa0845940 AT4G01680.2 39.496 119 59 2 130 235 11 129 3.43e-22 97.8
Msa0845940 AT1G74080.1 47.368 95 49 1 133 226 14 108 3.77e-22 97.4
Msa0845940 AT2G47190.1 39.344 122 69 2 115 235 8 125 3.88e-22 95.9
Msa0845940 AT5G61420.2 43.396 106 59 1 133 237 14 119 4.90e-22 97.4
Msa0845940 AT1G22640.1 42.241 116 59 3 126 234 2 116 6.11e-22 95.1
Msa0845940 AT3G02940.2 42.105 114 60 2 126 233 2 115 6.11e-22 96.3
Msa0845940 AT3G02940.1 42.105 114 60 2 126 233 2 115 8.10e-22 96.3
Msa0845940 AT3G02940.3 42.105 114 60 2 126 233 2 115 8.10e-22 96.3
Msa0845940 AT5G52260.1 46.154 104 53 2 133 234 14 116 9.49e-22 94.7
Msa0845940 AT4G21440.1 45.098 102 55 1 133 233 14 115 1.08e-21 96.3
Msa0845940 AT5G55020.1 42.727 110 62 1 133 241 28 137 1.25e-21 97.8
Msa0845940 AT3G61250.1 41.667 132 62 4 133 261 14 133 1.27e-21 95.1
Msa0845940 AT3G13540.1 36.000 125 73 2 120 237 6 130 1.37e-21 94.0
Msa0845940 AT1G34670.1 40.870 115 62 2 126 234 2 116 1.49e-21 95.9
Msa0845940 AT5G62470.1 41.346 104 61 0 133 236 14 117 1.75e-21 95.5
Msa0845940 AT2G02820.1 36.697 109 69 0 136 244 33 141 2.26e-21 96.7
Msa0845940 AT5G57620.1 41.121 107 61 2 129 233 10 116 2.63e-21 94.7
Msa0845940 AT2G02820.3 36.697 109 69 0 136 244 33 141 2.73e-21 94.7
Msa0845940 AT4G09460.1 40.000 115 61 3 126 233 2 115 2.92e-21 92.8
Msa0845940 AT3G08500.1 40.179 112 66 1 125 235 24 135 3.00e-21 94.7
Msa0845940 AT5G23000.1 42.593 108 58 2 129 233 10 116 3.02e-21 94.7
Msa0845940 AT3G01140.2 41.228 114 61 2 126 233 2 115 3.14e-21 94.7
Msa0845940 AT2G02820.2 36.697 109 69 0 136 244 33 141 3.33e-21 96.3
Msa0845940 AT3G24310.1 40.000 115 66 2 133 245 20 133 4.09e-21 93.2
Msa0845940 AT1G74430.1 40.566 106 62 1 133 237 14 119 4.12e-21 93.2
Msa0845940 AT5G14750.3 50.725 69 34 0 166 234 18 86 4.58e-21 90.1
Msa0845940 AT5G07700.1 45.098 102 55 1 133 233 14 115 5.82e-21 94.0
Msa0845940 AT5G07700.2 45.098 102 55 1 133 233 14 115 5.82e-21 94.0
Msa0845940 AT3G01140.1 43.137 102 57 1 133 233 57 158 6.53e-21 94.4
Msa0845940 AT5G65790.1 38.017 121 72 3 133 250 14 134 7.82e-21 94.0
Msa0845940 AT4G13480.1 43.810 105 56 2 133 235 8 111 8.42e-21 92.0
Msa0845940 AT1G18710.1 41.176 102 59 1 133 233 14 115 8.85e-21 92.0
Msa0845940 AT4G34990.1 40.351 114 62 2 126 233 2 115 8.99e-21 92.0
Msa0845940 AT5G15310.1 40.351 114 62 2 126 233 2 115 9.61e-21 93.2
Msa0845940 AT5G35550.1 37.815 119 72 2 133 249 16 134 1.07e-20 91.7
Msa0845940 AT5G15310.2 40.351 114 62 2 126 233 2 115 1.18e-20 92.8
Msa0845940 AT3G49690.1 42.718 103 57 2 133 233 14 116 1.43e-20 92.4
Msa0845940 AT5G16600.1 35.862 145 85 4 133 274 14 153 1.47e-20 92.4
Msa0845940 AT1G25340.2 39.423 104 59 1 133 236 20 119 1.55e-20 91.7
Msa0845940 AT1G25340.1 40.566 106 60 2 133 236 20 124 1.57e-20 91.7
Msa0845940 AT1G68320.1 41.509 106 59 2 133 236 21 125 1.70e-20 91.7
Msa0845940 AT5G07690.1 43.564 101 56 1 133 232 14 114 1.91e-20 92.4
Msa0845940 AT3G60460.1 44.660 103 55 2 126 226 6 108 2.18e-20 91.7
Msa0845940 AT5G15310.4 40.351 114 62 2 126 233 2 115 2.24e-20 90.5
Msa0845940 AT2G16720.1 39.655 116 62 3 126 234 2 116 2.47e-20 90.9
Msa0845940 AT3G27810.1 41.441 111 63 2 129 238 18 127 2.63e-20 89.7
Msa0845940 AT3G47600.1 40.952 105 61 1 133 236 14 118 2.87e-20 91.7
Msa0845940 AT1G25340.3 39.423 104 59 1 133 236 20 119 3.09e-20 91.3
Msa0845940 AT1G14350.2 36.522 115 70 1 127 238 16 130 3.94e-20 92.8
Msa0845940 AT1G14350.1 36.522 115 70 1 127 238 16 130 3.94e-20 92.8
Msa0845940 AT1G08810.1 40.336 119 68 2 133 250 14 130 4.21e-20 90.5
Msa0845940 AT5G40350.1 28.241 216 125 7 129 342 15 202 5.19e-20 88.6
Msa0845940 AT4G12350.1 41.346 104 58 2 133 234 14 116 5.95e-20 90.1
Msa0845940 AT5G62470.2 40.952 105 61 1 133 236 14 118 6.26e-20 91.3
Msa0845940 AT1G66370.1 34.884 129 80 3 126 252 2 128 6.99e-20 89.0
Msa0845940 AT1G66380.1 39.091 110 66 1 126 234 3 112 1.16e-19 85.5
Msa0845940 AT3G01530.1 42.593 108 59 2 133 238 27 133 1.28e-19 87.4
Msa0845940 AT1G74650.1 41.748 103 59 1 133 234 14 116 1.64e-19 89.7
Msa0845940 AT5G49330.1 40.777 103 60 1 133 234 14 116 2.29e-19 89.4
Msa0845940 AT4G22680.1 42.718 103 56 2 133 233 14 115 2.34e-19 87.8
Msa0845940 AT3G28910.1 42.157 102 58 1 133 233 14 115 2.51e-19 89.0
Msa0845940 AT1G48000.1 43.158 95 53 1 133 226 34 128 2.67e-19 87.4
Msa0845940 AT1G66230.1 41.509 106 59 2 133 236 14 118 2.84e-19 88.2
Msa0845940 AT2G47460.1 37.500 128 76 2 133 259 14 138 4.19e-19 89.0
Msa0845940 AT3G53200.2 46.429 84 34 1 166 249 12 84 6.61e-19 85.1
Msa0845940 AT3G12820.2 52.941 68 32 0 166 233 2 69 1.05e-18 84.3
Msa0845940 AT5G26660.2 47.222 72 38 0 166 237 17 88 3.96e-18 85.5
Msa0845940 AT4G37780.1 35.652 115 71 3 133 244 14 128 4.22e-18 85.1
Msa0845940 AT5G49620.1 44.330 97 53 1 133 228 28 124 5.09e-18 84.7
Msa0845940 AT5G59780.2 48.611 72 37 0 166 237 23 94 5.79e-18 82.8
Msa0845940 AT3G18100.1 41.053 95 56 0 133 227 546 640 6.35e-18 87.0
Msa0845940 AT3G46130.3 48.611 72 37 0 166 237 13 84 6.98e-18 82.8
Msa0845940 AT3G18100.3 41.053 95 56 0 133 227 498 592 7.55e-18 86.7
Msa0845940 AT3G18100.4 41.489 94 55 0 133 226 385 478 9.02e-18 86.3
Msa0845940 AT3G46130.4 48.611 72 37 0 166 237 23 94 9.17e-18 82.8
Msa0845940 AT2G36890.1 42.718 103 57 2 133 233 14 116 9.83e-18 84.0
Msa0845940 AT3G18100.2 41.053 95 56 0 133 227 333 427 1.28e-17 85.9
Msa0845940 AT3G06490.1 43.878 98 52 2 133 228 21 117 1.43e-17 84.0
Msa0845940 AT2G36890.2 42.718 103 57 2 133 233 55 157 1.60e-17 84.0
Msa0845940 AT1G56650.1 36.364 121 76 1 126 245 3 123 2.10e-17 82.0
Msa0845940 AT3G27810.2 49.315 73 36 1 166 238 7 78 2.28e-17 80.1
Msa0845940 AT3G62610.1 38.835 103 62 1 133 234 14 116 2.69e-17 83.2
Msa0845940 AT5G35550.2 43.529 85 47 1 166 249 53 137 3.73e-17 81.6
Msa0845940 AT5G40350.2 52.459 61 29 0 166 226 8 68 7.58e-17 78.6
Msa0845940 AT5G62320.1 41.441 111 55 3 133 234 15 124 7.92e-17 80.1
Msa0845940 AT1G66390.1 38.182 110 67 1 126 234 3 112 2.61e-16 79.0
Msa0845940 AT3G47600.2 46.479 71 38 0 166 236 42 112 1.30e-15 78.2
Msa0845940 AT2G37630.1 35.088 114 71 1 133 243 4 117 1.74e-15 78.2
Msa0845940 AT5G49620.2 38.739 111 53 2 133 228 28 138 7.87e-15 75.5
Msa0845940 AT1G66380.3 46.377 69 37 0 166 234 11 79 1.29e-14 70.1
Msa0845940 AT5G14750.4 44.828 58 32 0 176 233 1 58 8.65e-14 68.9
Msa0845940 AT5G14750.2 44.828 58 32 0 176 233 1 58 8.65e-14 68.9
Msa0845940 AT1G71030.2 40.909 66 39 0 169 234 5 70 1.34e-13 69.3
Msa0845940 AT1G71030.1 40.909 66 39 0 169 234 19 84 1.64e-13 69.3
Msa0845940 AT1G22640.3 47.458 59 31 0 176 234 1 59 1.19e-12 67.0
Msa0845940 AT3G23250.2 44.262 61 34 0 176 236 1 61 1.24e-12 67.8
Msa0845940 AT1G09770.1 37.647 85 52 1 134 218 8 91 4.73e-11 65.5

Find 92 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGAACTTGTTGCTCTTTA+TGG 0.055543 5_4:-25353413 Msa0845940:CDS
ATGCAAGCACATAGAATTTA+TGG 0.169715 5_4:-25352833 Msa0845940:CDS
CCATTCTGCTGTAAACATTT+TGG 0.171567 5_4:+25352681 None:intergenic
CATTGAAGTTGGTGTTATTA+TGG 0.189617 5_4:+25353537 None:intergenic
GAAAGACACTCACTTATAAA+TGG 0.218742 5_4:+25353650 None:intergenic
TGTTGATTCTTGGATCTAAT+TGG 0.226790 5_4:+25352891 None:intergenic
TTTATGTTCTTCATATCTTT+TGG 0.231970 5_4:+25353628 None:intergenic
CCTCTTTGCCACTTCCATTA+GGG 0.244007 5_4:+25353501 None:intergenic
TGGAGGGAAAAGGTTCTTAT+TGG 0.252461 5_4:-25353592 Msa0845940:CDS
AATGCTCTTCTGTTGATTCT+TGG 0.265592 5_4:+25352881 None:intergenic
AAGATATGAAGAACATAAAA+TGG 0.265941 5_4:-25353624 Msa0845940:CDS
TCCAATTTCTTCTATGCATA+TGG 0.283073 5_4:-25353795 Msa0845940:CDS
ACCATATGCATAGAAGAAAT+TGG 0.284854 5_4:+25353794 None:intergenic
ACAGCATTGTCTGTTCTTCC+TGG 0.287438 5_4:+25352779 None:intergenic
CTCTTTATGGTCCTCAAAAC+TGG 0.287586 5_4:-25353400 Msa0845940:CDS
TCCTCTTTGCCACTTCCATT+AGG 0.312075 5_4:+25353500 None:intergenic
AAATCACTGGCATGTTATAA+TGG 0.323655 5_4:-25352753 Msa0845940:CDS
AGAAGTAGCATATGGGAAAA+TGG 0.333027 5_4:+25352559 None:intergenic
CTCTCTATCAACACAAACTA+TGG 0.336963 5_4:-25353752 Msa0845940:CDS
TGAGGAGTTTCAACAGCATC+TGG 0.344189 5_4:+25351466 None:intergenic
CATTCAATCAGATCAGATAC+TGG 0.376946 5_4:-25351672 Msa0845940:CDS
AGCAACAAGTTCTTTAAGCT+TGG 0.378116 5_4:+25353421 None:intergenic
AAGAAGAAGAAGAAAGAGAT+TGG 0.379326 5_4:+25353825 None:intergenic
ACATAAAATGGATGATGATA+TGG 0.385290 5_4:-25353612 Msa0845940:CDS
GGGGCTCCATTGAGAAAATA+AGG 0.387825 5_4:+25352599 None:intergenic
CATGGTGGTAGGGTTGAGTA+TGG 0.404238 5_4:-25352521 Msa0845940:CDS
CTCCATCACAAAGCTCTTGT+AGG 0.410727 5_4:+25353688 None:intergenic
TATGCGAAGGCAAGAGTTGT+AGG 0.412480 5_4:-25352928 Msa0845940:intron
TGTTGGAAAGAAGTAGCATA+TGG 0.427053 5_4:+25352551 None:intergenic
ATAGAATTTATGGAAACAAA+TGG 0.443806 5_4:-25352823 Msa0845940:CDS
CTCTAACTCATCATTGAAGT+TGG 0.446037 5_4:+25353526 None:intergenic
TCTTCTTCTCCTGTATGCAC+TGG 0.451134 5_4:+25352709 None:intergenic
GTGTCTCTGCGGCCAAAGCT+TGG 0.455340 5_4:+25352650 None:intergenic
ATGGAGCAAAATCCAAGCTT+TGG 0.457109 5_4:-25352662 Msa0845940:CDS
TCTTTCCAACATTGTGCTCA+TGG 0.461539 5_4:-25352539 Msa0845940:CDS
GCAAGAGTTGTAGGCTAAGA+TGG 0.469016 5_4:-25352919 Msa0845940:CDS
TTTCTCAATGGAGCCCCACT+TGG 0.471962 5_4:-25352593 Msa0845940:CDS
ATGATAGCAAGACTATTTCC+AGG 0.475295 5_4:-25352797 Msa0845940:CDS
AGTGGCAAAGAGGAAGATAA+TGG 0.477427 5_4:-25353491 Msa0845940:CDS
GATGAGTTAGAGAACCCTAA+TGG 0.489473 5_4:-25353515 Msa0845940:CDS
TTAAGCTTGGAATCTTCAGC+AGG 0.491648 5_4:+25353434 None:intergenic
CAGTATCTGATCTGATTGAA+TGG 0.492098 5_4:+25351673 None:intergenic
AACATTGTGCTCATGGTGGT+AGG 0.492580 5_4:-25352532 Msa0845940:CDS
GAATCTTATAGCTGAAAAGT+TGG 0.494696 5_4:-25353378 Msa0845940:CDS
AAGAGCTTTGTGATGGAGAA+TGG 0.496350 5_4:-25353683 Msa0845940:CDS
GAAAAGTTGGAAGGAAGATC+AGG 0.498813 5_4:-25353365 Msa0845940:intron
GGTTCTTATTGGAGTGAGGA+AGG 0.499259 5_4:-25353581 Msa0845940:CDS
CATATGGTTTATGCAGACCT+TGG 0.505208 5_4:-25353779 Msa0845940:CDS
TAAAATGGATGATGATATGG+AGG 0.514900 5_4:-25353609 Msa0845940:CDS
GATGATGATATGGAGGGAAA+AGG 0.515079 5_4:-25353602 Msa0845940:CDS
TAGAATTTATGGAAACAAAT+GGG 0.516486 5_4:-25352822 Msa0845940:CDS
AGCATACAAACCAACATGTA+GGG 0.516701 5_4:+25352448 None:intergenic
TGATTCTGTTTCCATTGTTG+TGG 0.518322 5_4:+25352628 None:intergenic
GTAAATGTGCAAGAGGGCAT+TGG 0.525006 5_4:-25353460 Msa0845940:CDS
AAAAGGTTCTTATTGGAGTG+AGG 0.527759 5_4:-25353585 Msa0845940:CDS
GAGGAGTTTCAACAGCATCT+GGG 0.530438 5_4:+25351467 None:intergenic
CCAAAATGTTTACAGCAGAA+TGG 0.535209 5_4:-25352681 Msa0845940:CDS
GAGAACAATCCAGTGCATAC+AGG 0.549261 5_4:-25352718 Msa0845940:CDS
TACCACCATGAGCACAATGT+TGG 0.549480 5_4:+25352534 None:intergenic
AATATTGTTGAGGATAATGA+TGG 0.551677 5_4:+25351602 None:intergenic
ACACCAGAGAAGTAATCAAA+AGG 0.553846 5_4:+25352416 None:intergenic
GAGCATACAAACCAACATGT+AGG 0.558851 5_4:+25352447 None:intergenic
TTAGAGAACCCTAATGGAAG+TGG 0.562159 5_4:-25353509 Msa0845940:CDS
TTCTCAATGGAGCCCCACTT+GGG 0.562639 5_4:-25352592 Msa0845940:CDS
AATGTGCAAGAGGGCATTGG+AGG 0.567448 5_4:-25353457 Msa0845940:CDS
CTTATAGCTGAAAAGTTGGA+AGG 0.575448 5_4:-25353374 Msa0845940:CDS
GTTGGAAAGAAGTAGCATAT+GGG 0.582719 5_4:+25352552 None:intergenic
ACATTGTGCTCATGGTGGTA+GGG 0.583708 5_4:-25352531 Msa0845940:CDS
TGCCTACAAGAGCTTTGTGA+TGG 0.587526 5_4:-25353690 Msa0845940:CDS
CAGTCTAGTAAATGTGCAAG+AGG 0.591655 5_4:-25353467 Msa0845940:CDS
CCCTAATGGAAGTGGCAAAG+AGG 0.591951 5_4:-25353501 Msa0845940:CDS
AGGAGTTTCAACAGCATCTG+GGG 0.596052 5_4:+25351468 None:intergenic
ATGCAAGGACCCCTACATGT+TGG 0.603281 5_4:-25352458 Msa0845940:CDS
CCGCAGAGACACCACAACAA+TGG 0.610250 5_4:-25352639 Msa0845940:CDS
ATCATGTAGCACCTACTCCA+AGG 0.615109 5_4:+25351431 None:intergenic
TGGACACACTATTCCCAAGT+GGG 0.619688 5_4:+25352579 None:intergenic
TTTGTCATCAAATATTGTTG+AGG 0.625193 5_4:+25351592 None:intergenic
TTCCAACATTGTGCTCATGG+TGG 0.629597 5_4:-25352536 Msa0845940:CDS
ATTCAATCAGATCAGATACT+GGG 0.636557 5_4:-25351671 Msa0845940:CDS
GGTGAGAGAGAAGCTATGCA+AGG 0.639165 5_4:-25352473 Msa0845940:CDS
AATCAGATCAGATACTGGGA+TGG 0.649755 5_4:-25351667 Msa0845940:CDS
TCTCTCTCACCACTCATGTG+AGG 0.664807 5_4:+25352485 None:intergenic
CCATTGTTGTGGTGTCTCTG+CGG 0.666871 5_4:+25352639 None:intergenic
AAAATGGATGATGATATGGA+GGG 0.685350 5_4:-25353608 Msa0845940:CDS
GCATACAAACCAACATGTAG+GGG 0.687045 5_4:+25352449 None:intergenic
TGTTGATAGAGAGAGATCCA+AGG 0.688359 5_4:+25353762 None:intergenic
TGGTAGAAGCAATGACATGG+TGG 0.688499 5_4:-25351701 Msa0845940:CDS
AGTCTAGTAAATGTGCAAGA+GGG 0.697348 5_4:-25353466 Msa0845940:CDS
ATGGACACACTATTCCCAAG+TGG 0.700526 5_4:+25352578 None:intergenic
GGACACACTATTCCCAAGTG+GGG 0.700541 5_4:+25352580 None:intergenic
GCTCCATTGAGAAAATAAGG+TGG 0.743341 5_4:+25352602 None:intergenic
AGTTGGTAGAAGCAATGACA+TGG 0.754945 5_4:-25351704 Msa0845940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTCATATAGTTTTAAATTT+CGG - chr5_4:25352209-25352228 Msa0845940:intron 15.0%
!! AAATCAATTTATAAAAACCA+TGG + chr5_4:25352944-25352963 None:intergenic 15.0%
!!! GTTTTTATAAATTGATTTTG+TGG - chr5_4:25352946-25352965 Msa0845940:intron 15.0%
!!! ATCATTTTTCTATTTTCTAT+AGG - chr5_4:25353320-25353339 Msa0845940:intron 15.0%
!! TCCTATTAATTAACATAATT+TGG - chr5_4:25353540-25353559 Msa0845940:CDS 15.0%
!! ACCAAATTATGTTAATTAAT+AGG + chr5_4:25353544-25353563 None:intergenic 15.0%
!!! GTTCATATAGTTTTAAATTT+CGG - chr5_4:25352209-25352228 Msa0845940:intron 15.0%
!! AAATCAATTTATAAAAACCA+TGG + chr5_4:25352944-25352963 None:intergenic 15.0%
!!! GTTTTTATAAATTGATTTTG+TGG - chr5_4:25352946-25352965 Msa0845940:intron 15.0%
!!! ATCATTTTTCTATTTTCTAT+AGG - chr5_4:25353320-25353339 Msa0845940:intron 15.0%
!! TCCTATTAATTAACATAATT+TGG - chr5_4:25353540-25353559 Msa0845940:CDS 15.0%
!! ACCAAATTATGTTAATTAAT+AGG + chr5_4:25353544-25353563 None:intergenic 15.0%
!!! TTTATGTTCTTCATATCTTT+TGG + chr5_4:25351652-25351671 None:intergenic 20.0%
!! AAGATATGAAGAACATAAAA+TGG - chr5_4:25351653-25351672 Msa0845940:CDS 20.0%
!! TATGAAGAGATGTATATATT+TGG - chr5_4:25352291-25352310 Msa0845940:intron 20.0%
!!! TTTTTTTTTTTTGTATGCGA+AGG - chr5_4:25352336-25352355 Msa0845940:intron 20.0%
!! ATAGAATTTATGGAAACAAA+TGG - chr5_4:25352454-25352473 Msa0845940:CDS 20.0%
!! TAGAATTTATGGAAACAAAT+GGG - chr5_4:25352455-25352474 Msa0845940:CDS 20.0%
!!! AATTTGGTTTAATTTGAAGT+TGG - chr5_4:25353556-25353575 Msa0845940:CDS 20.0%
!!! TTTATGTTCTTCATATCTTT+TGG + chr5_4:25351652-25351671 None:intergenic 20.0%
!! AAGATATGAAGAACATAAAA+TGG - chr5_4:25351653-25351672 Msa0845940:CDS 20.0%
!! TATGAAGAGATGTATATATT+TGG - chr5_4:25352291-25352310 Msa0845940:intron 20.0%
!!! TTTTTTTTTTTTGTATGCGA+AGG - chr5_4:25352336-25352355 Msa0845940:intron 20.0%
!! ATAGAATTTATGGAAACAAA+TGG - chr5_4:25352454-25352473 Msa0845940:CDS 20.0%
!! TAGAATTTATGGAAACAAAT+GGG - chr5_4:25352455-25352474 Msa0845940:CDS 20.0%
!!! AATTTGGTTTAATTTGAAGT+TGG - chr5_4:25353556-25353575 Msa0845940:CDS 20.0%
! ACATAAAATGGATGATGATA+TGG - chr5_4:25351665-25351684 Msa0845940:CDS 25.0%
! ATCATGTATGTTTGAATTGA+CGG - chr5_4:25351992-25352011 Msa0845940:intron 25.0%
!!! ATAAATTGATTTTGTGGTCA+CGG - chr5_4:25352952-25352971 Msa0845940:intron 25.0%
!! AATGTTCTAAATTGCAATCA+CGG + chr5_4:25353043-25353062 None:intergenic 25.0%
! GTTTACACACAAAAAAAACT+AGG + chr5_4:25353095-25353114 None:intergenic 25.0%
!!! AGTTTTTTTTGTGTGTAAAC+TGG - chr5_4:25353095-25353114 Msa0845940:intron 25.0%
!!! GTTTTTTTTGTGTGTAAACT+GGG - chr5_4:25353096-25353115 Msa0845940:intron 25.0%
! ATTTCAAAGACCTAATATTG+TGG + chr5_4:25353394-25353413 None:intergenic 25.0%
! CTCTGCAACAATATAAAAAT+TGG - chr5_4:25353414-25353433 Msa0845940:CDS 25.0%
! TATGTGTGACAAATAATGAA+GGG + chr5_4:25353490-25353509 None:intergenic 25.0%
! ATATGTGTGACAAATAATGA+AGG + chr5_4:25353491-25353510 None:intergenic 25.0%
! AATATTGTTGAGGATAATGA+TGG + chr5_4:25353678-25353697 None:intergenic 25.0%
! TTTGTCATCAAATATTGTTG+AGG + chr5_4:25353688-25353707 None:intergenic 25.0%
! ACATAAAATGGATGATGATA+TGG - chr5_4:25351665-25351684 Msa0845940:CDS 25.0%
! ATCATGTATGTTTGAATTGA+CGG - chr5_4:25351992-25352011 Msa0845940:intron 25.0%
!!! ATAAATTGATTTTGTGGTCA+CGG - chr5_4:25352952-25352971 Msa0845940:intron 25.0%
!! AATGTTCTAAATTGCAATCA+CGG + chr5_4:25353043-25353062 None:intergenic 25.0%
! GTTTACACACAAAAAAAACT+AGG + chr5_4:25353095-25353114 None:intergenic 25.0%
!!! AGTTTTTTTTGTGTGTAAAC+TGG - chr5_4:25353095-25353114 Msa0845940:intron 25.0%
!!! GTTTTTTTTGTGTGTAAACT+GGG - chr5_4:25353096-25353115 Msa0845940:intron 25.0%
! ATTTCAAAGACCTAATATTG+TGG + chr5_4:25353394-25353413 None:intergenic 25.0%
! CTCTGCAACAATATAAAAAT+TGG - chr5_4:25353414-25353433 Msa0845940:CDS 25.0%
! TATGTGTGACAAATAATGAA+GGG + chr5_4:25353490-25353509 None:intergenic 25.0%
! ATATGTGTGACAAATAATGA+AGG + chr5_4:25353491-25353510 None:intergenic 25.0%
! AATATTGTTGAGGATAATGA+TGG + chr5_4:25353678-25353697 None:intergenic 25.0%
! TTTGTCATCAAATATTGTTG+AGG + chr5_4:25353688-25353707 None:intergenic 25.0%
AAGAAGAAGAAGAAAGAGAT+TGG + chr5_4:25351455-25351474 None:intergenic 30.0%
TCCAATTTCTTCTATGCATA+TGG - chr5_4:25351482-25351501 Msa0845940:CDS 30.0%
ACCATATGCATAGAAGAAAT+TGG + chr5_4:25351486-25351505 None:intergenic 30.0%
GAAAGACACTCACTTATAAA+TGG + chr5_4:25351630-25351649 None:intergenic 30.0%
TAAAATGGATGATGATATGG+AGG - chr5_4:25351668-25351687 Msa0845940:CDS 30.0%
AAAATGGATGATGATATGGA+GGG - chr5_4:25351669-25351688 Msa0845940:CDS 30.0%
!! CATTGAAGTTGGTGTTATTA+TGG + chr5_4:25351743-25351762 None:intergenic 30.0%
!! AAAGAACTTGTTGCTCTTTA+TGG - chr5_4:25351864-25351883 Msa0845940:intron 30.0%
GAATCTTATAGCTGAAAAGT+TGG - chr5_4:25351899-25351918 Msa0845940:intron 30.0%
! ACGGTATGTTATTGTGATTT+TGG - chr5_4:25352027-25352046 Msa0845940:intron 30.0%
!! TGTTGATTCTTGGATCTAAT+TGG + chr5_4:25352389-25352408 None:intergenic 30.0%
ATGCAAGCACATAGAATTTA+TGG - chr5_4:25352444-25352463 Msa0845940:CDS 30.0%
AAATCACTGGCATGTTATAA+TGG - chr5_4:25352524-25352543 Msa0845940:CDS 30.0%
! GTGATTGCAATTTAGAACAT+TGG - chr5_4:25353042-25353061 Msa0845940:intron 30.0%
! CTAGGTTTGAATTCAGTTTT+GGG + chr5_4:25353218-25353237 None:intergenic 30.0%
GATAGTATGTTGAATCAACT+AGG + chr5_4:25353303-25353322 None:intergenic 30.0%
ATTCAATCAGATCAGATACT+GGG - chr5_4:25353606-25353625 Msa0845940:CDS 30.0%
AAGAAGAAGAAGAAAGAGAT+TGG + chr5_4:25351455-25351474 None:intergenic 30.0%
TCCAATTTCTTCTATGCATA+TGG - chr5_4:25351482-25351501 Msa0845940:CDS 30.0%
ACCATATGCATAGAAGAAAT+TGG + chr5_4:25351486-25351505 None:intergenic 30.0%
GAAAGACACTCACTTATAAA+TGG + chr5_4:25351630-25351649 None:intergenic 30.0%
TAAAATGGATGATGATATGG+AGG - chr5_4:25351668-25351687 Msa0845940:CDS 30.0%
AAAATGGATGATGATATGGA+GGG - chr5_4:25351669-25351688 Msa0845940:CDS 30.0%
!! CATTGAAGTTGGTGTTATTA+TGG + chr5_4:25351743-25351762 None:intergenic 30.0%
!! AAAGAACTTGTTGCTCTTTA+TGG - chr5_4:25351864-25351883 Msa0845940:intron 30.0%
GAATCTTATAGCTGAAAAGT+TGG - chr5_4:25351899-25351918 Msa0845940:intron 30.0%
! ACGGTATGTTATTGTGATTT+TGG - chr5_4:25352027-25352046 Msa0845940:intron 30.0%
!! TGTTGATTCTTGGATCTAAT+TGG + chr5_4:25352389-25352408 None:intergenic 30.0%
ATGCAAGCACATAGAATTTA+TGG - chr5_4:25352444-25352463 Msa0845940:CDS 30.0%
AAATCACTGGCATGTTATAA+TGG - chr5_4:25352524-25352543 Msa0845940:CDS 30.0%
! GTGATTGCAATTTAGAACAT+TGG - chr5_4:25353042-25353061 Msa0845940:intron 30.0%
! CTAGGTTTGAATTCAGTTTT+GGG + chr5_4:25353218-25353237 None:intergenic 30.0%
GATAGTATGTTGAATCAACT+AGG + chr5_4:25353303-25353322 None:intergenic 30.0%
ATTCAATCAGATCAGATACT+GGG - chr5_4:25353606-25353625 Msa0845940:CDS 30.0%
CTCTCTATCAACACAAACTA+TGG - chr5_4:25351525-25351544 Msa0845940:CDS 35.0%
AAAAGGTTCTTATTGGAGTG+AGG - chr5_4:25351692-25351711 Msa0845940:CDS 35.0%
CTCTAACTCATCATTGAAGT+TGG + chr5_4:25351754-25351773 None:intergenic 35.0%
AGTCTAGTAAATGTGCAAGA+GGG - chr5_4:25351811-25351830 Msa0845940:intron 35.0%
AGCAACAAGTTCTTTAAGCT+TGG + chr5_4:25351859-25351878 None:intergenic 35.0%
! GCTATAAGATTCCAGTTTTG+AGG + chr5_4:25351891-25351910 None:intergenic 35.0%
CTTATAGCTGAAAAGTTGGA+AGG - chr5_4:25351903-25351922 Msa0845940:intron 35.0%
TTTGAATTGACGGTGACTTT+GGG - chr5_4:25352002-25352021 Msa0845940:intron 35.0%
!! AATGCTCTTCTGTTGATTCT+TGG + chr5_4:25352399-25352418 None:intergenic 35.0%
ATGATAGCAAGACTATTTCC+AGG - chr5_4:25352480-25352499 Msa0845940:CDS 35.0%
ACAATGCTGTGAAAAATCAC+TGG - chr5_4:25352511-25352530 Msa0845940:CDS 35.0%
! CCATTCTGCTGTAAACATTT+TGG + chr5_4:25352599-25352618 None:intergenic 35.0%
CCAAAATGTTTACAGCAGAA+TGG - chr5_4:25352596-25352615 Msa0845940:CDS 35.0%
TGATTCTGTTTCCATTGTTG+TGG + chr5_4:25352652-25352671 None:intergenic 35.0%
!!! TCACCACCTTATTTTCTCAA+TGG - chr5_4:25352672-25352691 Msa0845940:CDS 35.0%
AGAAGTAGCATATGGGAAAA+TGG + chr5_4:25352721-25352740 None:intergenic 35.0%
GTTGGAAAGAAGTAGCATAT+GGG + chr5_4:25352728-25352747 None:intergenic 35.0%
TGTTGGAAAGAAGTAGCATA+TGG + chr5_4:25352729-25352748 None:intergenic 35.0%
! AATGTTTTACCTCACATGAG+TGG - chr5_4:25352783-25352802 Msa0845940:CDS 35.0%
AGCATACAAACCAACATGTA+GGG + chr5_4:25352832-25352851 None:intergenic 35.0%
ACACCAGAGAAGTAATCAAA+AGG + chr5_4:25352864-25352883 None:intergenic 35.0%
TATGAAGTGGCAAAAAGAGA+AGG + chr5_4:25352906-25352925 None:intergenic 35.0%
! TTGCCACTTCATATTCTTGT+AGG - chr5_4:25352913-25352932 Msa0845940:CDS 35.0%
TCTCCTACAAGAATATGAAG+TGG + chr5_4:25352919-25352938 None:intergenic 35.0%
! CCTAGGTTTGAATTCAGTTT+TGG + chr5_4:25353219-25353238 None:intergenic 35.0%
CCAAAACTGAATTCAAACCT+AGG - chr5_4:25353216-25353235 Msa0845940:intron 35.0%
! TCTAGCTTAACTAAGTTCCT+AGG + chr5_4:25353236-25353255 None:intergenic 35.0%
CAGTATCTGATCTGATTGAA+TGG + chr5_4:25353607-25353626 None:intergenic 35.0%
CATTCAATCAGATCAGATAC+TGG - chr5_4:25353605-25353624 Msa0845940:CDS 35.0%
CCAAGGAAGTCAAAAAATTG+AGG + chr5_4:25353832-25353851 None:intergenic 35.0%
!!! CCTCAATTTTTTGACTTCCT+TGG - chr5_4:25353829-25353848 Msa0845940:CDS 35.0%
!!! TTTTTTGACTTCCTTGGAGT+AGG - chr5_4:25353835-25353854 Msa0845940:CDS 35.0%
CTCTCTATCAACACAAACTA+TGG - chr5_4:25351525-25351544 Msa0845940:CDS 35.0%
AAAAGGTTCTTATTGGAGTG+AGG - chr5_4:25351692-25351711 Msa0845940:CDS 35.0%
CTCTAACTCATCATTGAAGT+TGG + chr5_4:25351754-25351773 None:intergenic 35.0%
AGTCTAGTAAATGTGCAAGA+GGG - chr5_4:25351811-25351830 Msa0845940:intron 35.0%
AGCAACAAGTTCTTTAAGCT+TGG + chr5_4:25351859-25351878 None:intergenic 35.0%
! GCTATAAGATTCCAGTTTTG+AGG + chr5_4:25351891-25351910 None:intergenic 35.0%
CTTATAGCTGAAAAGTTGGA+AGG - chr5_4:25351903-25351922 Msa0845940:intron 35.0%
TTTGAATTGACGGTGACTTT+GGG - chr5_4:25352002-25352021 Msa0845940:intron 35.0%
!! AATGCTCTTCTGTTGATTCT+TGG + chr5_4:25352399-25352418 None:intergenic 35.0%
ATGATAGCAAGACTATTTCC+AGG - chr5_4:25352480-25352499 Msa0845940:CDS 35.0%
ACAATGCTGTGAAAAATCAC+TGG - chr5_4:25352511-25352530 Msa0845940:CDS 35.0%
! CCATTCTGCTGTAAACATTT+TGG + chr5_4:25352599-25352618 None:intergenic 35.0%
CCAAAATGTTTACAGCAGAA+TGG - chr5_4:25352596-25352615 Msa0845940:CDS 35.0%
TGATTCTGTTTCCATTGTTG+TGG + chr5_4:25352652-25352671 None:intergenic 35.0%
!!! TCACCACCTTATTTTCTCAA+TGG - chr5_4:25352672-25352691 Msa0845940:CDS 35.0%
AGAAGTAGCATATGGGAAAA+TGG + chr5_4:25352721-25352740 None:intergenic 35.0%
GTTGGAAAGAAGTAGCATAT+GGG + chr5_4:25352728-25352747 None:intergenic 35.0%
TGTTGGAAAGAAGTAGCATA+TGG + chr5_4:25352729-25352748 None:intergenic 35.0%
! AATGTTTTACCTCACATGAG+TGG - chr5_4:25352783-25352802 Msa0845940:CDS 35.0%
AGCATACAAACCAACATGTA+GGG + chr5_4:25352832-25352851 None:intergenic 35.0%
ACACCAGAGAAGTAATCAAA+AGG + chr5_4:25352864-25352883 None:intergenic 35.0%
TATGAAGTGGCAAAAAGAGA+AGG + chr5_4:25352906-25352925 None:intergenic 35.0%
! TTGCCACTTCATATTCTTGT+AGG - chr5_4:25352913-25352932 Msa0845940:CDS 35.0%
TCTCCTACAAGAATATGAAG+TGG + chr5_4:25352919-25352938 None:intergenic 35.0%
! CCTAGGTTTGAATTCAGTTT+TGG + chr5_4:25353219-25353238 None:intergenic 35.0%
CCAAAACTGAATTCAAACCT+AGG - chr5_4:25353216-25353235 Msa0845940:intron 35.0%
! TCTAGCTTAACTAAGTTCCT+AGG + chr5_4:25353236-25353255 None:intergenic 35.0%
CAGTATCTGATCTGATTGAA+TGG + chr5_4:25353607-25353626 None:intergenic 35.0%
CATTCAATCAGATCAGATAC+TGG - chr5_4:25353605-25353624 Msa0845940:CDS 35.0%
CCAAGGAAGTCAAAAAATTG+AGG + chr5_4:25353832-25353851 None:intergenic 35.0%
!!! CCTCAATTTTTTGACTTCCT+TGG - chr5_4:25353829-25353848 Msa0845940:CDS 35.0%
!!! TTTTTTGACTTCCTTGGAGT+AGG - chr5_4:25353835-25353854 Msa0845940:CDS 35.0%
CATATGGTTTATGCAGACCT+TGG - chr5_4:25351498-25351517 Msa0845940:CDS 40.0%
! TGTTGATAGAGAGAGATCCA+AGG + chr5_4:25351518-25351537 None:intergenic 40.0%
! AAGAGCTTTGTGATGGAGAA+TGG - chr5_4:25351594-25351613 Msa0845940:CDS 40.0%
GATGATGATATGGAGGGAAA+AGG - chr5_4:25351675-25351694 Msa0845940:CDS 40.0%
TGGAGGGAAAAGGTTCTTAT+TGG - chr5_4:25351685-25351704 Msa0845940:CDS 40.0%
GATGAGTTAGAGAACCCTAA+TGG - chr5_4:25351762-25351781 Msa0845940:intron 40.0%
TTAGAGAACCCTAATGGAAG+TGG - chr5_4:25351768-25351787 Msa0845940:intron 40.0%
AGTGGCAAAGAGGAAGATAA+TGG - chr5_4:25351786-25351805 Msa0845940:intron 40.0%
CAGTCTAGTAAATGTGCAAG+AGG - chr5_4:25351810-25351829 Msa0845940:intron 40.0%
TTAAGCTTGGAATCTTCAGC+AGG + chr5_4:25351846-25351865 None:intergenic 40.0%
CTCTTTATGGTCCTCAAAAC+TGG - chr5_4:25351877-25351896 Msa0845940:intron 40.0%
GAAAAGTTGGAAGGAAGATC+AGG - chr5_4:25351912-25351931 Msa0845940:intron 40.0%
GTTTGAATTGACGGTGACTT+TGG - chr5_4:25352001-25352020 Msa0845940:intron 40.0%
AACAAGATTGTGAGCATGCT+TGG + chr5_4:25352118-25352137 None:intergenic 40.0%
ATGGAGCAAAATCCAAGCTT+TGG - chr5_4:25352615-25352634 Msa0845940:CDS 40.0%
GCTCCATTGAGAAAATAAGG+TGG + chr5_4:25352678-25352697 None:intergenic 40.0%
TCTTTCCAACATTGTGCTCA+TGG - chr5_4:25352738-25352757 Msa0845940:CDS 40.0%
GCATACAAACCAACATGTAG+GGG + chr5_4:25352831-25352850 None:intergenic 40.0%
GAGCATACAAACCAACATGT+AGG + chr5_4:25352833-25352852 None:intergenic 40.0%
!! GCACCTTTTGATTACTTCTC+TGG - chr5_4:25352858-25352877 Msa0845940:CDS 40.0%
TATTCTTGTAGGAGACACCA+TGG - chr5_4:25352924-25352943 Msa0845940:intron 40.0%
! ACTAATCCCTCGAGTATTGT+GGG - chr5_4:25353143-25353162 Msa0845940:intron 40.0%
! GAGTATTGTGGGACTCAAAT+GGG - chr5_4:25353154-25353173 Msa0845940:intron 40.0%
CAGCAGCGTTAAAACTCTTT+GGG + chr5_4:25353191-25353210 None:intergenic 40.0%
TTGCTTAGATGAGATGGAAC+AGG + chr5_4:25353264-25353283 None:intergenic 40.0%
CGAAGATTGCTTAGATGAGA+TGG + chr5_4:25353270-25353289 None:intergenic 40.0%
!! AGTTGGTAGAAGCAATGACA+TGG - chr5_4:25353573-25353592 Msa0845940:CDS 40.0%
AATCAGATCAGATACTGGGA+TGG - chr5_4:25353610-25353629 Msa0845940:CDS 40.0%
CATATGGTTTATGCAGACCT+TGG - chr5_4:25351498-25351517 Msa0845940:CDS 40.0%
! TGTTGATAGAGAGAGATCCA+AGG + chr5_4:25351518-25351537 None:intergenic 40.0%
! AAGAGCTTTGTGATGGAGAA+TGG - chr5_4:25351594-25351613 Msa0845940:CDS 40.0%
GATGATGATATGGAGGGAAA+AGG - chr5_4:25351675-25351694 Msa0845940:CDS 40.0%
TGGAGGGAAAAGGTTCTTAT+TGG - chr5_4:25351685-25351704 Msa0845940:CDS 40.0%
GATGAGTTAGAGAACCCTAA+TGG - chr5_4:25351762-25351781 Msa0845940:intron 40.0%
TTAGAGAACCCTAATGGAAG+TGG - chr5_4:25351768-25351787 Msa0845940:intron 40.0%
AGTGGCAAAGAGGAAGATAA+TGG - chr5_4:25351786-25351805 Msa0845940:intron 40.0%
CAGTCTAGTAAATGTGCAAG+AGG - chr5_4:25351810-25351829 Msa0845940:intron 40.0%
TTAAGCTTGGAATCTTCAGC+AGG + chr5_4:25351846-25351865 None:intergenic 40.0%
CTCTTTATGGTCCTCAAAAC+TGG - chr5_4:25351877-25351896 Msa0845940:intron 40.0%
GAAAAGTTGGAAGGAAGATC+AGG - chr5_4:25351912-25351931 Msa0845940:intron 40.0%
GTTTGAATTGACGGTGACTT+TGG - chr5_4:25352001-25352020 Msa0845940:intron 40.0%
AACAAGATTGTGAGCATGCT+TGG + chr5_4:25352118-25352137 None:intergenic 40.0%
ATGGAGCAAAATCCAAGCTT+TGG - chr5_4:25352615-25352634 Msa0845940:CDS 40.0%
GCTCCATTGAGAAAATAAGG+TGG + chr5_4:25352678-25352697 None:intergenic 40.0%
TCTTTCCAACATTGTGCTCA+TGG - chr5_4:25352738-25352757 Msa0845940:CDS 40.0%
GCATACAAACCAACATGTAG+GGG + chr5_4:25352831-25352850 None:intergenic 40.0%
GAGCATACAAACCAACATGT+AGG + chr5_4:25352833-25352852 None:intergenic 40.0%
!! GCACCTTTTGATTACTTCTC+TGG - chr5_4:25352858-25352877 Msa0845940:CDS 40.0%
TATTCTTGTAGGAGACACCA+TGG - chr5_4:25352924-25352943 Msa0845940:intron 40.0%
! ACTAATCCCTCGAGTATTGT+GGG - chr5_4:25353143-25353162 Msa0845940:intron 40.0%
! GAGTATTGTGGGACTCAAAT+GGG - chr5_4:25353154-25353173 Msa0845940:intron 40.0%
CAGCAGCGTTAAAACTCTTT+GGG + chr5_4:25353191-25353210 None:intergenic 40.0%
TTGCTTAGATGAGATGGAAC+AGG + chr5_4:25353264-25353283 None:intergenic 40.0%
CGAAGATTGCTTAGATGAGA+TGG + chr5_4:25353270-25353289 None:intergenic 40.0%
!! AGTTGGTAGAAGCAATGACA+TGG - chr5_4:25353573-25353592 Msa0845940:CDS 40.0%
AATCAGATCAGATACTGGGA+TGG - chr5_4:25353610-25353629 Msa0845940:CDS 40.0%
! TGCCTACAAGAGCTTTGTGA+TGG - chr5_4:25351587-25351606 Msa0845940:CDS 45.0%
CTCCATCACAAAGCTCTTGT+AGG + chr5_4:25351592-25351611 None:intergenic 45.0%
GGTTCTTATTGGAGTGAGGA+AGG - chr5_4:25351696-25351715 Msa0845940:CDS 45.0%
! CCTCTTTGCCACTTCCATTA+GGG + chr5_4:25351779-25351798 None:intergenic 45.0%
! TCCTCTTTGCCACTTCCATT+AGG + chr5_4:25351780-25351799 None:intergenic 45.0%
! GTAAATGTGCAAGAGGGCAT+TGG - chr5_4:25351817-25351836 Msa0845940:intron 45.0%
TATGCGAAGGCAAGAGTTGT+AGG - chr5_4:25352349-25352368 Msa0845940:intron 45.0%
GCAAGAGTTGTAGGCTAAGA+TGG - chr5_4:25352358-25352377 Msa0845940:intron 45.0%
ACAGCATTGTCTGTTCTTCC+TGG + chr5_4:25352501-25352520 None:intergenic 45.0%
GAGAACAATCCAGTGCATAC+AGG - chr5_4:25352559-25352578 Msa0845940:CDS 45.0%
TCTTCTTCTCCTGTATGCAC+TGG + chr5_4:25352571-25352590 None:intergenic 45.0%
GGGGCTCCATTGAGAAAATA+AGG + chr5_4:25352681-25352700 None:intergenic 45.0%
TGGACACACTATTCCCAAGT+GGG + chr5_4:25352701-25352720 None:intergenic 45.0%
ATGGACACACTATTCCCAAG+TGG + chr5_4:25352702-25352721 None:intergenic 45.0%
TTCCAACATTGTGCTCATGG+TGG - chr5_4:25352741-25352760 Msa0845940:CDS 45.0%
TACCACCATGAGCACAATGT+TGG + chr5_4:25352746-25352765 None:intergenic 45.0%
AACATTGTGCTCATGGTGGT+AGG - chr5_4:25352745-25352764 Msa0845940:CDS 45.0%
ACATTGTGCTCATGGTGGTA+GGG - chr5_4:25352746-25352765 Msa0845940:CDS 45.0%
! GACTAATCCCTCGAGTATTG+TGG - chr5_4:25353142-25353161 Msa0845940:intron 45.0%
TTGAGTCCCACAATACTCGA+GGG + chr5_4:25353152-25353171 None:intergenic 45.0%
TTTGAGTCCCACAATACTCG+AGG + chr5_4:25353153-25353172 None:intergenic 45.0%
! CGAGTATTGTGGGACTCAAA+TGG - chr5_4:25353153-25353172 Msa0845940:intron 45.0%
GCAGCAGCGTTAAAACTCTT+TGG + chr5_4:25353192-25353211 None:intergenic 45.0%
GCGATGACGACCACAATATT+AGG - chr5_4:25353381-25353400 Msa0845940:CDS 45.0%
TGGTAGAAGCAATGACATGG+TGG - chr5_4:25353576-25353595 Msa0845940:CDS 45.0%
AGGAGTTTCAACAGCATCTG+GGG + chr5_4:25353812-25353831 None:intergenic 45.0%
GAGGAGTTTCAACAGCATCT+GGG + chr5_4:25353813-25353832 None:intergenic 45.0%
TGAGGAGTTTCAACAGCATC+TGG + chr5_4:25353814-25353833 None:intergenic 45.0%
! TGCCTACAAGAGCTTTGTGA+TGG - chr5_4:25351587-25351606 Msa0845940:CDS 45.0%
CTCCATCACAAAGCTCTTGT+AGG + chr5_4:25351592-25351611 None:intergenic 45.0%
GGTTCTTATTGGAGTGAGGA+AGG - chr5_4:25351696-25351715 Msa0845940:CDS 45.0%
! CCTCTTTGCCACTTCCATTA+GGG + chr5_4:25351779-25351798 None:intergenic 45.0%
! TCCTCTTTGCCACTTCCATT+AGG + chr5_4:25351780-25351799 None:intergenic 45.0%
! GTAAATGTGCAAGAGGGCAT+TGG - chr5_4:25351817-25351836 Msa0845940:intron 45.0%
TATGCGAAGGCAAGAGTTGT+AGG - chr5_4:25352349-25352368 Msa0845940:intron 45.0%
GCAAGAGTTGTAGGCTAAGA+TGG - chr5_4:25352358-25352377 Msa0845940:intron 45.0%
ACAGCATTGTCTGTTCTTCC+TGG + chr5_4:25352501-25352520 None:intergenic 45.0%
GAGAACAATCCAGTGCATAC+AGG - chr5_4:25352559-25352578 Msa0845940:CDS 45.0%
TCTTCTTCTCCTGTATGCAC+TGG + chr5_4:25352571-25352590 None:intergenic 45.0%
GGGGCTCCATTGAGAAAATA+AGG + chr5_4:25352681-25352700 None:intergenic 45.0%
TGGACACACTATTCCCAAGT+GGG + chr5_4:25352701-25352720 None:intergenic 45.0%
ATGGACACACTATTCCCAAG+TGG + chr5_4:25352702-25352721 None:intergenic 45.0%
TTCCAACATTGTGCTCATGG+TGG - chr5_4:25352741-25352760 Msa0845940:CDS 45.0%
TACCACCATGAGCACAATGT+TGG + chr5_4:25352746-25352765 None:intergenic 45.0%
AACATTGTGCTCATGGTGGT+AGG - chr5_4:25352745-25352764 Msa0845940:CDS 45.0%
ACATTGTGCTCATGGTGGTA+GGG - chr5_4:25352746-25352765 Msa0845940:CDS 45.0%
! GACTAATCCCTCGAGTATTG+TGG - chr5_4:25353142-25353161 Msa0845940:intron 45.0%
TTGAGTCCCACAATACTCGA+GGG + chr5_4:25353152-25353171 None:intergenic 45.0%
TTTGAGTCCCACAATACTCG+AGG + chr5_4:25353153-25353172 None:intergenic 45.0%
! CGAGTATTGTGGGACTCAAA+TGG - chr5_4:25353153-25353172 Msa0845940:intron 45.0%
GCAGCAGCGTTAAAACTCTT+TGG + chr5_4:25353192-25353211 None:intergenic 45.0%
GCGATGACGACCACAATATT+AGG - chr5_4:25353381-25353400 Msa0845940:CDS 45.0%
TGGTAGAAGCAATGACATGG+TGG - chr5_4:25353576-25353595 Msa0845940:CDS 45.0%
AGGAGTTTCAACAGCATCTG+GGG + chr5_4:25353812-25353831 None:intergenic 45.0%
GAGGAGTTTCAACAGCATCT+GGG + chr5_4:25353813-25353832 None:intergenic 45.0%
TGAGGAGTTTCAACAGCATC+TGG + chr5_4:25353814-25353833 None:intergenic 45.0%
CCCTAATGGAAGTGGCAAAG+AGG - chr5_4:25351776-25351795 Msa0845940:intron 50.0%
!! AATGTGCAAGAGGGCATTGG+AGG - chr5_4:25351820-25351839 Msa0845940:intron 50.0%
! TTGACGGTGACTTTGGGAGA+CGG - chr5_4:25352008-25352027 Msa0845940:intron 50.0%
CCATTGTTGTGGTGTCTCTG+CGG + chr5_4:25352641-25352660 None:intergenic 50.0%
TTTCTCAATGGAGCCCCACT+TGG - chr5_4:25352684-25352703 Msa0845940:CDS 50.0%
TTCTCAATGGAGCCCCACTT+GGG - chr5_4:25352685-25352704 Msa0845940:CDS 50.0%
GGACACACTATTCCCAAGTG+GGG + chr5_4:25352700-25352719 None:intergenic 50.0%
CATGGTGGTAGGGTTGAGTA+TGG - chr5_4:25352756-25352775 Msa0845940:CDS 50.0%
TCTCTCTCACCACTCATGTG+AGG + chr5_4:25352795-25352814 None:intergenic 50.0%
GGTGAGAGAGAAGCTATGCA+AGG - chr5_4:25352804-25352823 Msa0845940:CDS 50.0%
ATGCAAGGACCCCTACATGT+TGG - chr5_4:25352819-25352838 Msa0845940:CDS 50.0%
CCCTAATGGAAGTGGCAAAG+AGG - chr5_4:25351776-25351795 Msa0845940:intron 50.0%
!! AATGTGCAAGAGGGCATTGG+AGG - chr5_4:25351820-25351839 Msa0845940:intron 50.0%
! TTGACGGTGACTTTGGGAGA+CGG - chr5_4:25352008-25352027 Msa0845940:intron 50.0%
CCATTGTTGTGGTGTCTCTG+CGG + chr5_4:25352641-25352660 None:intergenic 50.0%
TTTCTCAATGGAGCCCCACT+TGG - chr5_4:25352684-25352703 Msa0845940:CDS 50.0%
TTCTCAATGGAGCCCCACTT+GGG - chr5_4:25352685-25352704 Msa0845940:CDS 50.0%
GGACACACTATTCCCAAGTG+GGG + chr5_4:25352700-25352719 None:intergenic 50.0%
CATGGTGGTAGGGTTGAGTA+TGG - chr5_4:25352756-25352775 Msa0845940:CDS 50.0%
TCTCTCTCACCACTCATGTG+AGG + chr5_4:25352795-25352814 None:intergenic 50.0%
GGTGAGAGAGAAGCTATGCA+AGG - chr5_4:25352804-25352823 Msa0845940:CDS 50.0%
ATGCAAGGACCCCTACATGT+TGG - chr5_4:25352819-25352838 Msa0845940:CDS 50.0%
CCGCAGAGACACCACAACAA+TGG - chr5_4:25352638-25352657 Msa0845940:CDS 55.0%
CCGCAGAGACACCACAACAA+TGG - chr5_4:25352638-25352657 Msa0845940:CDS 55.0%
GTGTCTCTGCGGCCAAAGCT+TGG + chr5_4:25352630-25352649 None:intergenic 60.0%
GTCTCTGCAGTTACGCGCAG+AGG + chr5_4:25353125-25353144 None:intergenic 60.0%
GTGTCTCTGCGGCCAAAGCT+TGG + chr5_4:25352630-25352649 None:intergenic 60.0%
GTCTCTGCAGTTACGCGCAG+AGG + chr5_4:25353125-25353144 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 25351432 25353867 25351432 ID=Msa0845940;Name=Msa0845940
chr5_4 mRNA 25351432 25353867 25351432 ID=Msa0845940-mRNA-1;Parent=Msa0845940;Name=Msa0845940-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0.5|0|1|1|1|3|0|438
chr5_4 exon 25353366 25353867 25353366 ID=Msa0845940-mRNA-1:exon:10087;Parent=Msa0845940-mRNA-1
chr5_4 exon 25352420 25352941 25352420 ID=Msa0845940-mRNA-1:exon:10086;Parent=Msa0845940-mRNA-1
chr5_4 exon 25351432 25351724 25351432 ID=Msa0845940-mRNA-1:exon:10085;Parent=Msa0845940-mRNA-1
chr5_4 CDS 25353366 25353867 25353366 ID=Msa0845940-mRNA-1:cds;Parent=Msa0845940-mRNA-1
chr5_4 CDS 25352420 25352941 25352420 ID=Msa0845940-mRNA-1:cds;Parent=Msa0845940-mRNA-1
chr5_4 CDS 25351432 25351724 25351432 ID=Msa0845940-mRNA-1:cds;Parent=Msa0845940-mRNA-1
Gene Sequence

>Msa0845940

ATGATCTCTTCACAAGAAAACCAATCTCTTTCTTCTTCTTCTTTATCATTTCCAATTTCTTCTATGCATATGGTTTATGCAGACCTTGGATCTCTCTCTATCAACACAAACTATGGTGTTGTTTCAAGTTTAGACAAAGAGAGTAAAAATAGCTATGCCTACAAGAGCTTTGTGATGGAGAATGGTAGTATCTTTCCATTTATAAGTGAGTGTCTTTCCAAAAGATATGAAGAACATAAAATGGATGATGATATGGAGGGAAAAGGTTCTTATTGGAGTGAGGAAGGTGAAAACAGTGAGAAAATAAACCATAATAACACCAACTTCAATGATGAGTTAGAGAACCCTAATGGAAGTGGCAAAGAGGAAGATAATGGACAGTCTAGTAAATGTGCAAGAGGGCATTGGAGGCCTGCTGAAGATTCCAAGCTTAAAGAACTTGTTGCTCTTTATGGTCCTCAAAACTGGAATCTTATAGCTGAAAAGTTGGAAGGAAGATCAGGCAAGAGTTGTAGGCTAAGATGGTTCAACCAATTAGATCCAAGAATCAACAGAAGAGCATTTACTGAAGAAGAAGAAGAGAGACTAATGCAAGCACATAGAATTTATGGAAACAAATGGGCAATGATAGCAAGACTATTTCCAGGAAGAACAGACAATGCTGTGAAAAATCACTGGCATGTTATAATGGCAAGAAAGTACAGAGAACAATCCAGTGCATACAGGAGAAGAAGATTGAGCCAAAATGTTTACAGCAGAATGGAGCAAAATCCAAGCTTTGGCCGCAGAGACACCACAACAATGGAAACAGAATCATCACCACCTTATTTTCTCAATGGAGCCCCACTTGGGAATAGTGTGTCCATTTTCCCATATGCTACTTCTTTCCAACATTGTGCTCATGGTGGTAGGGTTGAGTATGGTTTAAATGTTTTACCTCACATGAGTGGTGAGAGAGAAGCTATGCAAGGACCCCTACATGTTGGTTTGTATGCTCAACAAGCACCTTTTGATTACTTCTCTGTTGGTAGAAGCAATGACATGGTGGAAGAACCATTCAATCAGATCAGATACTGGGATGGCACTAATGATGAATATCAACAACAACAACTATCTAGTGTCTACCATCATTATCCTCAACAATATTTGATGACAAAGCAAAATCAAAACAATCACAATTTTCACATTTTCTCAAATTCATCAGCATCAGCAACATATCATAATGCAGAAAACAGTGAAAAAGTTCTGAATGATGACACCCCAGATGCTGTTGAAACTCCTCAATTTTTTGACTTCCTTGGAGTAGGTGCTACATGA
Protein sequence

>Msa0845940

MISSQENQSLSSSSLSFPISSMHMVYADLGSLSINTNYGVVSSLDKESKNSYAYKSFVMENGSIFPFISECLSKRYEEHKMDDDMEGKGSYWSEEGENSEKINHNNTNFNDELENPNGSGKEEDNGQSSKCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLSQNVYSRMEQNPSFGRRDTTTMETESSPPYFLNGAPLGNSVSIFPYATSFQHCAHGGRVEYGLNVLPHMSGEREAMQGPLHVGLYAQQAPFDYFSVGRSNDMVEEPFNQIRYWDGTNDEYQQQQLSSVYHHYPQQYLMTKQNQNNHNFHIFSNSSASATYHNAENSEKVLNDDTPDAVETPQFFDFLGVGAT*