AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1135380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1135380 MtrunA17_Chr7g0215961 95.798 357 14 1 1 357 1 356 0.0 702
Msa1135380 MtrunA17_Chr7g0275021 68.919 370 102 2 1 357 1 370 0.0 539
Msa1135380 MtrunA17_Chr6g0457921 67.116 371 103 4 1 357 1 366 0.0 510
Msa1135380 MtrunA17_Chr7g0275011 65.940 367 110 2 1 355 5 368 0.0 509
Msa1135380 MtrunA17_Chr7g0274991 66.116 363 108 3 7 357 10 369 7.70e-176 493
Msa1135380 MtrunA17_Chr1g0189931 65.970 335 102 1 32 354 31 365 6.35e-173 485
Msa1135380 MtrunA17_Chr7g0275001 66.667 342 101 2 29 357 21 362 1.64e-168 474
Msa1135380 MtrunA17_Chr1g0189901 64.095 337 109 1 31 355 29 365 6.52e-168 473
Msa1135380 MtrunA17_Chr4g0008851 62.778 360 118 3 12 357 13 370 1.24e-164 464
Msa1135380 MtrunA17_Chr1g0182811 58.172 361 132 4 11 357 16 371 5.15e-157 445
Msa1135380 MtrunA17_Chr1g0189891 58.630 365 126 4 8 355 2 358 4.56e-155 440
Msa1135380 MtrunA17_Chr8g0374101 39.003 341 187 8 33 353 37 376 2.86e-76 239
Msa1135380 MtrunA17_Chr4g0068441 38.369 331 185 7 33 347 35 362 1.55e-71 227
Msa1135380 MtrunA17_Chr2g0294311 36.337 344 196 6 30 351 29 371 2.62e-68 219
Msa1135380 MtrunA17_Chr3g0077571 34.943 352 214 6 12 353 11 357 1.29e-67 216
Msa1135380 MtrunA17_Chr3g0131321 36.061 330 196 4 33 347 34 363 1.97e-67 217
Msa1135380 MtrunA17_Chr2g0294301 35.312 337 201 5 30 351 32 366 8.68e-67 215
Msa1135380 MtrunA17_Chr5g0444401 34.808 339 197 6 33 352 28 361 1.43e-66 214
Msa1135380 MtrunA17_Chr5g0434621 34.808 339 202 6 11 336 6 338 5.57e-66 212
Msa1135380 MtrunA17_Chr3g0099161 33.777 376 210 10 1 353 67 426 6.26e-64 209
Msa1135380 MtrunA17_Chr5g0438621 33.333 336 203 7 10 327 4 336 4.65e-63 204
Msa1135380 MtrunA17_Chr8g0380041 32.044 362 232 8 6 353 2 363 8.34e-62 202
Msa1135380 MtrunA17_Chr4g0017431 33.333 357 223 4 11 353 8 363 7.47e-61 199
Msa1135380 MtrunA17_Chr3g0086641 34.954 329 199 8 16 330 19 346 8.16e-61 199
Msa1135380 MtrunA17_Chr2g0285061 33.824 340 205 7 6 330 7 341 2.22e-60 198
Msa1135380 MtrunA17_Chr3g0099151 33.714 350 200 9 28 353 81 422 2.31e-60 199
Msa1135380 MtrunA17_Chr3g0099231 32.698 367 214 9 5 351 6 359 2.37e-60 199
Msa1135380 MtrunA17_Chr3g0120861 32.822 326 201 6 28 338 33 355 9.32e-59 194
Msa1135380 MtrunA17_Chr1g0189911 57.534 146 61 1 210 354 2 147 1.40e-58 186
Msa1135380 MtrunA17_Chr2g0320671 33.913 345 202 7 6 335 11 344 1.55e-58 193
Msa1135380 MtrunA17_Chr3g0105401 32.258 341 207 7 10 335 12 343 8.08e-58 191
Msa1135380 MtrunA17_Chr1g0156891 33.903 351 213 7 1 335 10 357 1.21e-57 191
Msa1135380 MtrunA17_Chr2g0301641 33.244 373 214 9 7 354 16 378 2.78e-57 191
Msa1135380 MtrunA17_Chr5g0438641 31.977 344 208 8 8 335 13 346 5.05e-57 189
Msa1135380 MtrunA17_Chr3g0077581 32.970 367 224 8 6 353 7 370 9.39e-57 189
Msa1135380 MtrunA17_Chr5g0438631 32.738 336 207 6 11 330 6 338 2.45e-56 187
Msa1135380 MtrunA17_Chr3g0085881 34.421 337 197 9 27 351 27 351 3.00e-56 187
Msa1135380 MtrunA17_Chr2g0330781 34.056 323 186 8 33 335 31 346 3.01e-56 187
Msa1135380 MtrunA17_Chr8g0341001 31.778 343 211 8 10 335 11 347 3.55e-56 187
Msa1135380 MtrunA17_Chr1g0156921 31.461 356 212 9 8 342 16 360 4.38e-56 187
Msa1135380 MtrunA17_Chr2g0283191 33.523 352 193 9 6 326 11 352 4.84e-56 187
Msa1135380 MtrunA17_Chr3g0092131 32.934 334 208 6 16 335 6 337 5.96e-56 186
Msa1135380 MtrunA17_Chr8g0371491 32.951 349 209 8 10 340 14 355 6.86e-55 184
Msa1135380 MtrunA17_Chr4g0046151 33.152 368 198 11 6 337 11 366 3.92e-54 182
Msa1135380 MtrunA17_Chr1g0156931 31.092 357 218 8 4 342 11 357 4.19e-54 182
Msa1135380 MtrunA17_Chr8g0371481 33.438 320 194 8 33 336 41 357 9.40e-54 181
Msa1135380 MtrunA17_Chr4g0060811 33.651 315 193 5 35 335 29 341 1.30e-53 181
Msa1135380 MtrunA17_Chr5g0432101 30.372 349 223 6 1 332 1 346 5.40e-53 179
Msa1135380 MtrunA17_Chr1g0156901 34.557 327 188 7 33 342 50 367 5.97e-53 179
Msa1135380 MtrunA17_Chr5g0396511 30.422 332 214 6 35 351 48 377 1.34e-52 178
Msa1135380 MtrunA17_Chr8g0371471 31.889 323 194 9 33 336 41 356 3.35e-50 171
Msa1135380 MtrunA17_Chr5g0405831 30.887 327 201 7 33 340 43 363 3.88e-50 171
Msa1135380 MtrunA17_Chr1g0157001 33.837 331 195 8 38 351 41 364 5.07e-50 171
Msa1135380 MtrunA17_Chr4g0027521 31.461 356 213 9 1 336 1 345 1.62e-49 169
Msa1135380 MtrunA17_Chr5g0405821 31.118 331 196 10 33 340 43 364 1.06e-48 167
Msa1135380 MtrunA17_Chr1g0156911 30.938 320 198 6 29 331 33 346 4.36e-48 166
Msa1135380 MtrunA17_Chr3g0142941 29.688 320 202 6 33 335 47 360 2.74e-47 164
Msa1135380 MtrunA17_Chr8g0370951 29.891 368 229 9 7 351 5 366 5.73e-47 163
Msa1135380 MtrunA17_Chr7g0228261 72.340 94 26 0 262 355 1 94 7.78e-47 154
Msa1135380 MtrunA17_Chr2g0284951 31.471 340 205 9 27 351 27 353 9.83e-47 162
Msa1135380 MtrunA17_Chr2g0285001 31.105 344 209 9 26 351 26 359 1.40e-46 162
Msa1135380 MtrunA17_Chr8g0349341 32.295 353 205 12 20 352 26 364 1.42e-46 162
Msa1135380 MtrunA17_Chr8g0344931 31.579 342 202 10 30 353 34 361 2.82e-46 161
Msa1135380 MtrunA17_Chr8g0380031 29.619 341 214 7 27 353 78 406 4.27e-46 162
Msa1135380 MtrunA17_Chr8g0349321 30.108 372 221 11 6 352 7 364 4.81e-45 158
Msa1135380 MtrunA17_Chr3g0142921 31.715 309 193 6 33 326 36 341 7.96e-45 157
Msa1135380 MtrunA17_Chr8g0370981 27.654 405 224 9 10 352 21 418 1.92e-44 157
Msa1135380 MtrunA17_Chr2g0284921 30.645 310 192 6 34 329 35 335 4.16e-44 155
Msa1135380 MtrunA17_Chr2g0284991 29.240 342 213 8 27 350 27 357 4.41e-44 156
Msa1135380 MtrunA17_Chr5g0437421 32.209 326 190 7 30 331 29 347 5.13e-44 155
Msa1135380 MtrunA17_Chr5g0420811 31.642 335 197 13 12 329 11 330 4.00e-42 150
Msa1135380 MtrunA17_Chr8g0370961 30.638 235 155 3 118 350 14 242 1.52e-41 145
Msa1135380 MtrunA17_Chr8g0344941 28.000 350 229 8 5 336 13 357 1.44e-39 144
Msa1135380 MtrunA17_Chr3g0085231 27.083 336 210 10 33 351 31 348 3.46e-38 139
Msa1135380 MtrunA17_Chr2g0284941 29.032 341 196 9 27 351 27 337 9.66e-38 138
Msa1135380 MtrunA17_Chr1g0189921 67.708 96 19 1 32 115 30 125 3.37e-36 128
Msa1135380 MtrunA17_Chr8g0349301 31.206 282 170 7 33 301 37 307 9.85e-36 132
Msa1135380 MtrunA17_Chr8g0349331 28.412 359 189 10 16 352 20 332 5.41e-34 128
Msa1135380 MtrunA17_Chr4g0027571 28.507 221 154 3 124 342 3 221 3.09e-29 112
Msa1135380 MtrunA17_Chr2g0283481 30.052 386 225 15 1 350 12 388 1.70e-28 114
Msa1135380 MtrunA17_Chr1g0160031 30.352 369 205 16 9 337 12 368 1.72e-28 114
Msa1135380 MtrunA17_Chr6g0459921 26.937 271 186 8 88 353 98 361 5.21e-28 112
Msa1135380 MtrunA17_Chr6g0455661 26.160 237 171 4 119 353 238 472 2.00e-27 112
Msa1135380 MtrunA17_Chr6g0455661 44.118 102 38 4 33 122 31 125 2.64e-13 70.9
Msa1135380 MtrunA17_Chr7g0229591 35.632 174 98 3 10 170 7 179 9.05e-26 102
Msa1135380 MtrunA17_Chr8g0381581 26.005 373 224 15 6 337 13 374 2.27e-25 105
Msa1135380 MtrunA17_Chr6g0450721 25.000 356 227 11 8 338 7 347 3.34e-25 104
Msa1135380 MtrunA17_Chr1g0160101 26.667 375 217 14 6 338 17 375 2.10e-24 102
Msa1135380 MtrunA17_Chr1g0160011 28.649 370 213 16 9 338 12 370 7.04e-24 101
Msa1135380 MtrunA17_Chr6g0450731 26.870 361 224 13 4 338 3 349 1.18e-23 100
Msa1135380 MtrunA17_Chr7g0275291 24.668 377 231 12 1 338 1 363 1.50e-23 100
Msa1135380 MtrunA17_Chr7g0271551 27.378 347 187 14 35 344 38 356 1.62e-23 100
Msa1135380 MtrunA17_Chr2g0283501 29.076 368 201 17 10 337 13 360 8.31e-23 98.2
Msa1135380 MtrunA17_Chr1g0191461 26.133 375 224 15 1 336 1 361 1.06e-22 97.8
Msa1135380 MtrunA17_Chr6g0450701 26.975 367 221 15 7 338 12 366 8.06e-22 95.5
Msa1135380 MtrunA17_Chr2g0283511 29.204 339 188 16 38 337 36 361 1.75e-21 94.7
Msa1135380 MtrunA17_Chr7g0273101 26.420 352 205 13 33 344 29 366 2.84e-21 94.0
Msa1135380 MtrunA17_Chr7g0254461 25.201 373 222 15 10 338 20 379 6.03e-21 93.2
Msa1135380 MtrunA17_Chr8g0352901 27.568 370 217 14 6 338 5 360 6.64e-21 92.8
Msa1135380 MtrunA17_Chr8g0347751 26.437 348 203 15 32 338 35 370 7.57e-21 92.8
Msa1135380 MtrunA17_Chr6g0450711 26.471 340 204 13 33 338 122 449 2.34e-20 92.0
Msa1135380 MtrunA17_Chr1g0159971 26.136 352 205 12 28 338 42 379 5.47e-20 90.5
Msa1135380 MtrunA17_Chr1g0159991 26.455 378 228 15 1 338 1 368 5.49e-20 90.1
Msa1135380 MtrunA17_Chr7g0229581 29.932 147 101 2 198 342 8 154 8.16e-19 82.4
Msa1135380 MtrunA17_Chr1g0198381 25.217 345 195 15 34 347 3 315 1.25e-18 85.5
Msa1135380 MtrunA17_Chr5g0440501 23.214 224 164 3 120 336 10 232 1.26e-18 84.3
Msa1135380 MtrunA17_Chr7g0266061 27.358 318 178 14 34 324 43 334 6.94e-18 84.0
Msa1135380 MtrunA17_Chr6g0469511 39.837 123 60 3 24 133 21 142 2.50e-17 77.8
Msa1135380 MtrunA17_Chr1g0178941 26.284 331 196 14 32 334 39 349 3.64e-17 81.6
Msa1135380 MtrunA17_Chr4g0057991 23.256 387 234 15 1 344 1 367 1.92e-16 79.7
Msa1135380 MtrunA17_Chr4g0027561 37.190 121 63 1 10 117 7 127 5.36e-16 74.3
Msa1135380 MtrunA17_Chr2g0301581 25.069 363 214 13 8 337 9 346 4.36e-15 75.5
Msa1135380 MtrunA17_Chr1g0159981 25.132 378 229 16 1 338 15 378 2.41e-14 73.6
Msa1135380 MtrunA17_Chr3g0112821 24.198 343 219 14 32 344 29 360 3.25e-14 73.2
Msa1135380 MtrunA17_Chr7g0226941 24.425 348 207 13 33 338 33 366 5.68e-14 72.4
Msa1135380 MtrunA17_Chr3g0093031 24.713 348 216 16 32 344 29 365 6.67e-14 72.0
Msa1135380 MtrunA17_Chr2g0301541 24.518 363 216 13 8 337 9 346 2.01e-13 70.5
Msa1135380 MtrunA17_Chr2g0321991 38.793 116 53 4 6 106 7 119 5.21e-13 65.5
Msa1135380 MtrunA17_Chr4g0018571 30.822 146 93 3 195 335 28 170 1.38e-12 65.5
Msa1135380 MtrunA17_Chr8g0370971 38.400 125 57 6 8 114 14 136 3.60e-12 63.9
Msa1135380 MtrunA17_Chr4g0018561 39.474 76 43 1 9 81 3 78 4.49e-12 62.0
Msa1135380 MtrunA17_Chr3g0104831 24.194 248 159 10 106 337 58 292 2.36e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1135380 AT5G33370.1 66.859 347 101 2 23 357 22 366 9.82e-175 490
Msa1135380 AT3G04290.1 63.764 356 115 2 13 356 11 364 2.14e-172 484
Msa1135380 AT5G18430.1 63.912 363 113 4 5 353 4 362 1.81e-169 476
Msa1135380 AT4G28780.1 61.433 363 123 4 6 355 7 365 3.82e-162 458
Msa1135380 AT5G33370.2 64.207 271 83 2 23 281 22 290 1.48e-123 359
Msa1135380 AT2G23540.1 36.800 375 211 9 1 350 11 384 8.36e-78 244
Msa1135380 AT3G50400.1 37.772 368 208 10 1 347 1 368 1.23e-74 236
Msa1135380 AT5G15720.1 37.015 335 197 5 33 353 30 364 1.36e-68 219
Msa1135380 AT1G71691.2 37.391 345 193 7 22 354 51 384 2.58e-67 217
Msa1135380 AT1G33811.1 34.239 368 219 9 8 353 4 370 1.34e-64 209
Msa1135380 AT1G29660.1 35.475 358 212 7 12 353 10 364 4.94e-64 208
Msa1135380 AT2G42990.1 34.627 335 201 6 16 335 11 342 1.91e-63 206
Msa1135380 AT2G04570.1 32.948 346 207 7 8 338 10 345 3.71e-62 202
Msa1135380 AT5G37690.2 34.234 333 209 6 10 335 2 331 6.26e-62 202
Msa1135380 AT5G37690.1 33.431 341 209 6 10 335 2 339 1.23e-60 199
Msa1135380 AT1G75880.1 33.521 355 207 9 8 342 26 371 6.86e-60 197
Msa1135380 AT5G03820.1 34.104 346 208 5 7 335 7 349 1.26e-59 196
Msa1135380 AT1G75890.2 36.050 319 181 8 33 333 47 360 1.43e-59 196
Msa1135380 AT5G08460.1 34.561 353 213 5 16 350 30 382 1.83e-59 197
Msa1135380 AT5G03810.1 34.203 345 208 5 7 335 4 345 2.17e-59 196
Msa1135380 AT1G75890.3 36.050 319 181 8 33 333 76 389 3.08e-59 196
Msa1135380 AT5G03820.2 34.104 346 208 5 7 335 35 377 3.16e-59 196
Msa1135380 AT1G29670.1 33.151 365 223 7 6 353 3 363 3.81e-59 195
Msa1135380 AT1G71250.1 31.933 357 229 3 7 350 15 370 4.05e-59 195
Msa1135380 AT1G75880.2 33.521 355 206 10 8 342 26 370 1.35e-58 194
Msa1135380 AT4G26790.1 33.028 327 201 6 24 335 20 343 1.36e-58 193
Msa1135380 AT4G26790.2 33.028 327 201 6 24 335 20 343 1.36e-58 193
Msa1135380 AT5G22810.1 33.898 354 212 8 1 335 1 351 1.72e-58 193
Msa1135380 AT1G29670.2 33.151 365 223 7 6 353 71 431 2.18e-58 195
Msa1135380 AT5G45670.1 33.333 336 210 6 8 330 4 338 2.38e-58 193
Msa1135380 AT5G42170.1 34.069 317 188 6 34 335 51 361 5.34e-58 192
Msa1135380 AT1G75890.1 34.743 331 182 9 33 333 47 373 7.25e-57 190
Msa1135380 AT5G41890.1 34.302 344 188 10 35 347 33 369 1.31e-56 189
Msa1135380 AT4G18970.1 34.951 309 189 6 34 330 29 337 1.72e-56 188
Msa1135380 AT3G53100.1 35.455 330 188 8 21 335 24 343 3.38e-56 187
Msa1135380 AT4G18970.2 34.951 309 189 6 34 330 29 337 9.20e-56 187
Msa1135380 AT3G16370.1 34.169 319 191 7 33 335 30 345 5.00e-55 184
Msa1135380 AT4G10950.1 33.636 330 206 6 33 351 71 398 6.23e-55 185
Msa1135380 AT4G10950.2 33.033 333 208 4 33 351 71 402 1.70e-54 184
Msa1135380 AT1G58430.1 32.110 327 198 7 19 324 17 340 2.71e-54 182
Msa1135380 AT5G45960.1 34.161 322 188 6 25 326 39 356 4.82e-54 182
Msa1135380 AT2G30310.1 33.016 315 191 7 33 330 34 345 8.23e-54 181
Msa1135380 AT1G75900.1 33.127 323 189 8 33 336 43 357 1.15e-53 181
Msa1135380 AT1G71691.1 35.587 281 177 4 75 354 6 283 1.57e-53 178
Msa1135380 AT5G45950.1 32.716 324 197 8 33 342 40 356 1.68e-53 180
Msa1135380 AT2G31540.1 33.333 315 190 7 33 330 35 346 2.08e-53 180
Msa1135380 AT2G30220.1 30.556 360 230 7 1 343 1 357 7.71e-53 179
Msa1135380 AT1G06990.1 32.198 323 196 7 33 335 37 356 1.47e-52 178
Msa1135380 AT5G15720.3 33.818 275 178 3 83 353 59 333 2.62e-52 176
Msa1135380 AT1G74460.1 33.968 315 192 5 35 335 25 337 2.80e-52 177
Msa1135380 AT2G24560.1 31.833 311 188 6 33 324 34 339 1.65e-51 175
Msa1135380 AT5G55050.1 31.176 340 209 7 34 352 40 375 2.16e-51 175
Msa1135380 AT3G14820.1 32.219 329 193 9 33 342 32 349 2.33e-50 172
Msa1135380 AT5G40990.1 32.174 345 208 8 31 354 35 374 5.13e-50 172
Msa1135380 AT1G20120.1 29.467 319 207 6 33 336 78 393 3.96e-49 170
Msa1135380 AT2G19010.1 30.141 355 205 9 1 337 5 334 2.85e-48 166
Msa1135380 AT2G19010.2 30.141 355 205 9 1 337 35 364 5.72e-48 166
Msa1135380 AT2G19060.1 30.145 345 203 11 15 337 8 336 2.57e-47 164
Msa1135380 AT1G53990.1 30.387 362 229 9 10 353 8 364 2.61e-47 164
Msa1135380 AT2G40250.1 30.312 320 199 5 33 332 36 351 5.79e-47 163
Msa1135380 AT3G14225.1 30.946 349 215 9 28 353 32 377 1.30e-46 163
Msa1135380 AT1G59406.1 29.915 351 208 10 10 336 6 342 2.26e-46 161
Msa1135380 AT1G59030.1 29.915 351 208 10 10 336 6 342 2.26e-46 161
Msa1135380 AT1G58725.1 29.915 351 208 10 10 336 6 342 2.26e-46 161
Msa1135380 AT1G20130.2 30.435 322 195 7 33 330 184 500 2.96e-46 165
Msa1135380 AT5G15720.2 36.330 267 156 5 33 285 30 296 2.97e-46 160
Msa1135380 AT3G14225.2 31.034 348 212 9 28 353 32 373 3.00e-46 162
Msa1135380 AT1G20130.1 30.435 322 195 7 33 330 204 520 4.96e-46 165
Msa1135380 AT1G53940.2 30.526 380 234 10 1 354 1 376 6.97e-46 161
Msa1135380 AT2G19050.1 29.781 319 202 7 30 337 28 335 3.77e-45 158
Msa1135380 AT1G20135.1 31.157 337 204 8 9 331 5 327 5.04e-45 157
Msa1135380 AT1G71691.3 37.132 272 148 7 22 281 51 311 9.38e-45 156
Msa1135380 AT5G63170.1 31.437 334 192 9 8 326 10 321 1.30e-44 156
Msa1135380 AT1G73610.1 31.481 324 191 8 27 335 29 336 4.96e-44 155
Msa1135380 AT4G30140.1 30.422 332 201 8 34 352 34 348 2.04e-43 154
Msa1135380 AT3G43570.1 28.947 342 194 9 10 336 6 313 5.77e-43 152
Msa1135380 AT1G58520.3 30.650 323 186 9 33 335 30 334 6.62e-43 152
Msa1135380 AT1G58525.1 30.650 323 186 9 33 335 30 334 6.62e-43 152
Msa1135380 AT4G16230.1 39.912 228 119 6 7 220 6 229 4.14e-42 147
Msa1135380 AT1G20132.1 28.614 332 210 8 33 346 61 383 5.85e-41 148
Msa1135380 AT1G71120.1 32.267 344 202 12 23 347 21 352 1.17e-40 147
Msa1135380 AT2G24560.2 30.970 268 161 6 33 281 34 296 1.70e-39 142
Msa1135380 AT1G53920.1 28.571 357 223 10 5 337 16 364 1.72e-39 144
Msa1135380 AT2G03980.2 29.341 334 197 11 17 329 34 349 1.40e-36 136
Msa1135380 AT2G03980.3 29.341 334 197 11 17 329 34 349 1.40e-36 136
Msa1135380 AT2G03980.1 29.341 334 197 11 17 329 34 349 1.40e-36 136
Msa1135380 AT2G03980.4 29.341 334 197 11 17 329 34 349 1.40e-36 136
Msa1135380 AT1G23500.1 30.058 346 208 9 10 337 10 339 7.70e-36 133
Msa1135380 AT2G31550.1 32.524 206 134 3 128 330 2 205 9.94e-36 130
Msa1135380 AT1G75910.1 30.960 323 188 9 33 335 28 335 2.15e-35 132
Msa1135380 AT1G75930.1 30.925 346 202 12 11 335 6 335 5.33e-35 131
Msa1135380 AT2G19050.2 30.864 243 150 5 30 261 28 263 1.86e-34 128
Msa1135380 AT1G75920.2 28.746 327 191 10 33 336 29 336 3.87e-34 129
Msa1135380 AT3G43550.1 30.822 292 171 8 10 281 6 286 5.62e-34 127
Msa1135380 AT1G75920.1 27.485 342 191 10 33 336 24 346 5.41e-32 123
Msa1135380 AT1G75920.3 28.387 310 183 8 33 336 29 305 1.01e-30 119
Msa1135380 AT1G56670.1 27.807 374 214 14 5 344 12 363 3.53e-27 110
Msa1135380 AT1G54030.1 27.164 335 209 11 32 353 51 363 6.36e-27 110
Msa1135380 AT4G01130.1 26.075 372 221 14 11 341 13 371 4.05e-25 105
Msa1135380 AT1G53940.1 27.907 301 193 9 1 281 1 297 6.72e-25 103
Msa1135380 AT4G16233.1 36.508 126 79 1 229 353 5 130 5.81e-24 96.3
Msa1135380 AT1G09390.1 27.793 367 211 15 4 336 8 354 1.01e-23 101
Msa1135380 AT1G75920.4 26.333 300 179 10 60 336 28 308 3.72e-23 98.6
Msa1135380 AT2G04020.1 30.864 243 132 7 17 238 34 261 7.39e-23 96.7
Msa1135380 AT3G09930.2 26.970 330 188 13 30 330 36 341 5.95e-22 95.9
Msa1135380 AT3G09930.1 26.970 330 188 13 30 330 36 341 5.95e-22 95.9
Msa1135380 AT2G04020.2 31.222 221 122 6 17 222 34 239 7.83e-22 95.1
Msa1135380 AT5G45910.1 27.822 381 211 16 10 344 7 369 8.44e-22 95.5
Msa1135380 AT1G54790.3 25.490 357 208 15 30 344 29 369 1.95e-21 94.7
Msa1135380 AT3G62280.1 27.381 336 202 12 37 346 40 359 1.26e-20 92.4
Msa1135380 AT5G03610.1 27.385 325 192 12 30 330 40 344 2.77e-20 91.3
Msa1135380 AT3G27950.1 25.956 366 219 12 12 338 6 358 4.59e-20 90.9
Msa1135380 AT4G01130.3 25.430 291 180 9 82 341 1 285 1.34e-19 88.2
Msa1135380 AT1G28670.1 28.378 370 209 17 12 337 8 365 1.84e-19 89.0
Msa1135380 AT1G28600.1 27.988 343 197 16 32 337 30 359 2.87e-19 88.6
Msa1135380 AT1G28610.2 27.083 336 199 15 37 337 35 359 3.47e-19 88.2
Msa1135380 AT1G54790.1 24.407 295 180 11 82 344 85 368 2.24e-18 85.9
Msa1135380 AT3G26430.1 26.437 348 202 14 33 338 31 366 7.86e-18 84.3
Msa1135380 AT1G28660.1 29.301 372 202 19 12 337 8 364 9.98e-18 84.0
Msa1135380 AT3G14220.1 24.225 355 204 15 35 356 34 356 1.12e-17 83.6
Msa1135380 AT1G28580.1 28.280 343 197 17 32 337 36 366 1.44e-17 83.6
Msa1135380 AT5G14450.1 25.867 375 222 15 5 337 13 373 1.99e-17 83.2
Msa1135380 AT1G54000.1 22.764 369 244 12 1 347 2 351 3.02e-17 82.8
Msa1135380 AT1G28660.2 29.570 372 200 19 12 337 8 363 4.08e-17 82.4
Msa1135380 AT1G31550.2 28.090 356 201 20 37 353 40 379 4.32e-17 82.4
Msa1135380 AT1G28650.1 26.076 395 238 19 4 356 2 384 4.61e-17 82.0
Msa1135380 AT1G54030.2 28.390 236 140 9 32 256 51 268 7.38e-17 80.9
Msa1135380 AT2G27360.1 26.741 359 212 17 32 352 32 377 8.97e-17 81.3
Msa1135380 AT3G05180.1 24.269 342 213 11 33 337 36 368 1.21e-16 80.9
Msa1135380 AT1G28640.1 26.558 369 218 15 12 338 8 365 1.50e-16 80.5
Msa1135380 AT3G14210.1 25.000 340 216 12 33 351 36 357 2.24e-16 80.1
Msa1135380 AT1G54010.1 22.520 373 248 12 1 351 2 355 1.47e-15 77.8
Msa1135380 AT1G54020.2 22.727 330 225 10 35 351 35 347 1.49e-15 77.4
Msa1135380 AT1G28590.1 26.975 367 207 17 32 349 35 389 6.04e-15 75.9
Msa1135380 AT1G54790.2 24.845 322 171 15 82 344 85 394 6.52e-15 75.9
Msa1135380 AT1G56670.2 26.144 306 177 11 5 281 12 297 6.40e-14 72.0
Msa1135380 AT4G01130.2 24.080 299 186 12 11 281 13 298 6.83e-14 72.4
Msa1135380 AT1G28580.2 28.315 279 169 13 82 337 15 285 8.56e-14 71.6
Msa1135380 AT4G16220.1 42.623 122 54 4 4 112 2 120 2.06e-13 69.7
Msa1135380 AT1G54020.1 21.852 270 193 6 85 351 7 261 8.81e-13 68.6
Msa1135380 AT1G54020.5 21.852 270 193 6 85 351 7 261 8.81e-13 68.6
Msa1135380 AT1G54020.3 21.852 270 193 6 85 351 7 261 8.81e-13 68.6
Msa1135380 AT3G14210.2 25.000 212 147 4 148 351 22 229 1.35e-12 67.8
Msa1135380 AT5G03980.1 23.513 353 200 15 11 336 7 316 6.46e-12 66.2
Msa1135380 AT1G54020.4 21.845 206 156 2 148 351 10 212 1.63e-11 63.9

Find 72 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGAGACTTGTATGTATTT+TGG 0.108906 7_4:-2549142 Msa1135380:CDS
CTTCTAATTGGTGCCAATTT+TGG 0.116739 7_4:-2550429 Msa1135380:CDS
TTTAATTCTGGGCTCAAATA+TGG 0.226123 7_4:+2550462 None:intergenic
CCTTAGCACCATTCTTTCTT+TGG 0.229575 7_4:-2549033 Msa1135380:CDS
AATTCCAGCTGAACCAAAAT+TGG 0.235478 7_4:+2550416 None:intergenic
CTTCTCCTAGCTTCACCTTT+AGG 0.242700 7_4:+2551213 None:intergenic
AAAGGGCATAAACTTCTAAT+TGG 0.258824 7_4:-2550441 Msa1135380:CDS
GCACACTCCAATGCCATTAT+AGG 0.267744 7_4:+2549190 None:intergenic
GTTACTAATCCAACAGCTTA+TGG 0.274837 7_4:-2549365 Msa1135380:intron
CGTCGATTAACGAATTTAAT+AGG 0.279662 7_4:-2549970 Msa1135380:CDS
ATTGATCTCCTGTATCATTA+AGG 0.282449 7_4:+2550388 None:intergenic
TATTTGAGCCCAGAATTAAA+AGG 0.284970 7_4:-2550459 Msa1135380:CDS
GGTAGTTCTTAGTTTAGTTT+TGG 0.286131 7_4:-2551253 Msa1135380:CDS
GGAGATTCACTTGTCGATAA+TGG 0.287159 7_4:-2551174 Msa1135380:CDS
ATTGCAGAGGCTATATGATT+TGG 0.290553 7_4:-2549603 Msa1135380:intron
ACCTTGTGCCTTCTTCTTCA+AGG 0.300747 7_4:-2549867 Msa1135380:CDS
CGTGCTGATTCTCCTCCTTA+TGG 0.304741 7_4:-2551123 Msa1135380:CDS
TAGCACATGAATTAGATTAA+TGG 0.307911 7_4:-2549006 Msa1135380:exon
AATACATACAAGTCTCTGTT+AGG 0.315997 7_4:+2549146 None:intergenic
CTCGCTACGCGTAGCAGAAA+TGG 0.334058 7_4:-2549524 Msa1135380:CDS
GGCCTTATCAATCATTATCT+TGG 0.359814 7_4:-2548985 Msa1135380:three_prime_UTR
TTGCAGAGGCTATATGATTT+GGG 0.365901 7_4:-2549602 Msa1135380:intron
TGAGTACAGAAAGCACTTAC+AGG 0.372149 7_4:-2549800 Msa1135380:intron
CACACTCCAATGCCATTATA+GGG 0.395638 7_4:+2549191 None:intergenic
CATAGTGTGGTAATGGATAT+TGG 0.404270 7_4:+2549839 None:intergenic
GTAACATTTGTTCAAGTTGA+GGG 0.421129 7_4:+2549459 None:intergenic
TGTGGGCAAGGACCCTATAA+TGG 0.430542 7_4:-2549203 Msa1135380:CDS
CAAAGACTCAATAGGAAACT+TGG 0.439624 7_4:-2549437 Msa1135380:CDS
AAATGTTACAAAGACTCAAT+AGG 0.446396 7_4:-2549445 Msa1135380:CDS
AGAATGGTGCTAAGGTTCAT+TGG 0.449069 7_4:+2549041 None:intergenic
ATTGGAATCCTTAATGATAC+AGG 0.451862 7_4:-2550396 Msa1135380:CDS
CGAGTTCTAGTCACCGGAAC+AGG 0.461747 7_4:-2549572 Msa1135380:CDS
TATCCAACTCGTAGACCAAC+TGG 0.472262 7_4:-2551093 Msa1135380:CDS
AACTTGACATAGTGTGGTAA+TGG 0.474573 7_4:+2549832 None:intergenic
ATTGTGGAGCAAATTATGTC+AGG 0.480353 7_4:-2549083 Msa1135380:CDS
GTATTATTACCATAAGCTGT+TGG 0.485101 7_4:+2549356 None:intergenic
GCATTGTTTCTCATGACAGT+TGG 0.486126 7_4:-2549916 Msa1135380:CDS
TGTAACATTTGTTCAAGTTG+AGG 0.490197 7_4:+2549458 None:intergenic
ATTTGAGCCCAGAATTAAAA+GGG 0.490626 7_4:-2550458 Msa1135380:CDS
CATCAAAAGTAGCTTGTTGT+GGG 0.492729 7_4:-2549220 Msa1135380:CDS
TCCATTCCATCCATCTGAAA+AGG 0.494067 7_4:-2549117 Msa1135380:CDS
CAAGGACCCTATAATGGCAT+TGG 0.501551 7_4:-2549197 Msa1135380:CDS
GACCAAGATAATGATTGATA+AGG 0.501925 7_4:+2548983 None:intergenic
GTCACCGGAACAGGACCATT+GGG 0.502106 7_4:-2549563 Msa1135380:CDS
TTGTTTCTCATGACAGTTGG+AGG 0.512603 7_4:-2549913 Msa1135380:CDS
ACAACCCAATGGTCCTGTTC+CGG 0.513728 7_4:+2549559 None:intergenic
AAAGGCAAATAGACTTATTG+TGG 0.517199 7_4:-2549099 Msa1135380:CDS
TTAGGTGGTATTGTTCCTAA+AGG 0.517406 7_4:-2551228 Msa1135380:CDS
AGTCACCGGAACAGGACCAT+TGG 0.528716 7_4:-2549564 Msa1135380:CDS
GTTGGATAATCAATTCCATA+AGG 0.533484 7_4:+2551108 None:intergenic
GGCTATATGATTTGGGCGCT+CGG 0.535408 7_4:-2549595 Msa1135380:CDS
ACATCAAAAGTAGCTTGTTG+TGG 0.536147 7_4:-2549221 Msa1135380:CDS
AAAGTAGCTTGTTGTGGGCA+AGG 0.536850 7_4:-2549215 Msa1135380:CDS
ATATGAACAAAACTTGAAGA+TGG 0.546795 7_4:+2551279 None:intergenic
GCTAGCATCCAAAGAAAGAA+TGG 0.551790 7_4:+2549025 None:intergenic
TGGCGAGACCTTGAAGAAGA+AGG 0.553311 7_4:+2549859 None:intergenic
ATACATACAAGTCTCTGTTA+GGG 0.558009 7_4:+2549147 None:intergenic
CGAATTTAATAGGCGGTCGG+CGG 0.574495 7_4:-2549960 Msa1135380:CDS
GTCTCTGTTAGGGCACAAGT+TGG 0.575295 7_4:+2549157 None:intergenic
TTGTTCCTAAAGGTGAAGCT+AGG 0.576250 7_4:-2551218 Msa1135380:CDS
CCAAAGAAAGAATGGTGCTA+AGG 0.578834 7_4:+2549033 None:intergenic
GCTCGGCGAGTTCTAGTCAC+CGG 0.579911 7_4:-2549578 Msa1135380:CDS
GCTTTCTGTACTCACAAATG+AGG 0.596857 7_4:+2549809 None:intergenic
TAGCAGAAATGGTGAATGCT+CGG 0.598293 7_4:-2549513 Msa1135380:CDS
ATGAGGAACTTGACATAGTG+TGG 0.606912 7_4:+2549826 None:intergenic
TAACGAATTTAATAGGCGGT+CGG 0.607927 7_4:-2549963 Msa1135380:CDS
TCTGCAGGAGCACAACCCAA+TGG 0.645854 7_4:+2549548 None:intergenic
GGATAATCAATTCCATAAGG+AGG 0.650337 7_4:+2551111 None:intergenic
ACCTTGAAGAAGAAGGCACA+AGG 0.663893 7_4:+2549866 None:intergenic
CAGAAATGGTGAATGCTCGG+TGG 0.684198 7_4:-2549510 Msa1135380:CDS
CGATTAACGAATTTAATAGG+CGG 0.711144 7_4:-2549967 Msa1135380:CDS
TGCTCGGTGGAACTACAACG+TGG 0.852799 7_4:-2549497 Msa1135380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTAATATTTTAAAAT+GGG + chr7_4:2549330-2549349 None:intergenic 0.0%
!!! AATTTTTTAATATTTTAAAA+TGG + chr7_4:2549331-2549350 None:intergenic 0.0%
!!! ATTTTTTAATATTTTAAAAT+GGG + chr7_4:2549330-2549349 None:intergenic 0.0%
!!! AATTTTTTAATATTTTAAAA+TGG + chr7_4:2549331-2549350 None:intergenic 0.0%
!!! ATTAACCTTTTTTTTTTTTT+TGG - chr7_4:2549223-2549242 Msa1135380:CDS 10.0%
!!! ACTATATTGTTTTAAAATTT+TGG - chr7_4:2549611-2549630 Msa1135380:intron 10.0%
!!! ATTAACCTTTTTTTTTTTTT+TGG - chr7_4:2549223-2549242 Msa1135380:CDS 10.0%
!!! ACTATATTGTTTTAAAATTT+TGG - chr7_4:2549611-2549630 Msa1135380:intron 10.0%
!! TTAAGCCAAAAAAAAAAAAA+AGG + chr7_4:2549231-2549250 None:intergenic 15.0%
!! GGAAAATAAAATGATAAAAT+TGG - chr7_4:2549525-2549544 Msa1135380:CDS 15.0%
!!! TTGTTTTAAAATTTTGGAAT+AGG - chr7_4:2549617-2549636 Msa1135380:intron 15.0%
!! TTAAGCCAAAAAAAAAAAAA+AGG + chr7_4:2549231-2549250 None:intergenic 15.0%
!! GGAAAATAAAATGATAAAAT+TGG - chr7_4:2549525-2549544 Msa1135380:CDS 15.0%
!!! TTGTTTTAAAATTTTGGAAT+AGG - chr7_4:2549617-2549636 Msa1135380:intron 15.0%
!!! TTCAAGTTTTGTTCATATTA+TGG - chr7_4:2548960-2548979 Msa1135380:three_prime_UTR 20.0%
!! AAAAGGTTAATAAATATGCA+TGG + chr7_4:2549214-2549233 None:intergenic 20.0%
!! ATTCATGAATCTGTAAAAAT+GGG + chr7_4:2549270-2549289 None:intergenic 20.0%
!! AATTCATGAATCTGTAAAAA+TGG + chr7_4:2549271-2549290 None:intergenic 20.0%
!!! TTTTTTGTCAAGAAATAACA+TGG - chr7_4:2549504-2549523 Msa1135380:CDS 20.0%
!! TAATACATGCTATAAGTATT+TGG - chr7_4:2549939-2549958 Msa1135380:CDS 20.0%
!!! TTCATGACATTTTTTTGAAA+AGG + chr7_4:2550552-2550571 None:intergenic 20.0%
!!! TTCAAGTTTTGTTCATATTA+TGG - chr7_4:2548960-2548979 Msa1135380:three_prime_UTR 20.0%
!! AAAAGGTTAATAAATATGCA+TGG + chr7_4:2549214-2549233 None:intergenic 20.0%
!! ATTCATGAATCTGTAAAAAT+GGG + chr7_4:2549270-2549289 None:intergenic 20.0%
!! AATTCATGAATCTGTAAAAA+TGG + chr7_4:2549271-2549290 None:intergenic 20.0%
!!! TTTTTTGTCAAGAAATAACA+TGG - chr7_4:2549504-2549523 Msa1135380:CDS 20.0%
!! TAATACATGCTATAAGTATT+TGG - chr7_4:2549939-2549958 Msa1135380:CDS 20.0%
!!! TTCATGACATTTTTTTGAAA+AGG + chr7_4:2550552-2550571 None:intergenic 20.0%
! ATATGAACAAAACTTGAAGA+TGG + chr7_4:2548958-2548977 None:intergenic 25.0%
!!! AGAAGAGCTTTTTTTGTATT+TGG - chr7_4:2549039-2549058 Msa1135380:CDS 25.0%
! TTGTTGGATTTAAAAGTTGA+AGG + chr7_4:2549298-2549317 None:intergenic 25.0%
! AAAATAGACCTCAAATTTAC+TGG - chr7_4:2549554-2549573 Msa1135380:CDS 25.0%
!! ATAACAAACTATCCTTTTTC+AGG - chr7_4:2549721-2549740 Msa1135380:intron 25.0%
! AATTTGTGTCACATGTAATT+TGG + chr7_4:2550113-2550132 None:intergenic 25.0%
! AAACAAAAGTTGCATTATCA+AGG + chr7_4:2550189-2550208 None:intergenic 25.0%
! ATTAAGAAGAACAAACACAT+AGG + chr7_4:2550594-2550613 None:intergenic 25.0%
! AAATGTTACAAAGACTCAAT+AGG - chr7_4:2550789-2550808 Msa1135380:intron 25.0%
! TAGTTGTTGAAAATGAAAGT+TGG + chr7_4:2550923-2550942 None:intergenic 25.0%
! TGTTGTTGAATTAATTGTGT+AGG - chr7_4:2550983-2551002 Msa1135380:intron 25.0%
! TAGCACATGAATTAGATTAA+TGG - chr7_4:2551228-2551247 Msa1135380:CDS 25.0%
! ATATGAACAAAACTTGAAGA+TGG + chr7_4:2548958-2548977 None:intergenic 25.0%
!!! AGAAGAGCTTTTTTTGTATT+TGG - chr7_4:2549039-2549058 Msa1135380:CDS 25.0%
! TTGTTGGATTTAAAAGTTGA+AGG + chr7_4:2549298-2549317 None:intergenic 25.0%
! AAAATAGACCTCAAATTTAC+TGG - chr7_4:2549554-2549573 Msa1135380:CDS 25.0%
!! ATAACAAACTATCCTTTTTC+AGG - chr7_4:2549721-2549740 Msa1135380:intron 25.0%
! AATTTGTGTCACATGTAATT+TGG + chr7_4:2550113-2550132 None:intergenic 25.0%
! AAACAAAAGTTGCATTATCA+AGG + chr7_4:2550189-2550208 None:intergenic 25.0%
! ATTAAGAAGAACAAACACAT+AGG + chr7_4:2550594-2550613 None:intergenic 25.0%
! AAATGTTACAAAGACTCAAT+AGG - chr7_4:2550789-2550808 Msa1135380:intron 25.0%
! TAGTTGTTGAAAATGAAAGT+TGG + chr7_4:2550923-2550942 None:intergenic 25.0%
! TGTTGTTGAATTAATTGTGT+AGG - chr7_4:2550983-2551002 Msa1135380:intron 25.0%
! TAGCACATGAATTAGATTAA+TGG - chr7_4:2551228-2551247 Msa1135380:CDS 25.0%
!! GGTAGTTCTTAGTTTAGTTT+TGG - chr7_4:2548981-2549000 Msa1135380:three_prime_UTR 30.0%
!!! CTTAGTTTAGTTTTGGTGTT+AGG - chr7_4:2548988-2549007 Msa1135380:three_prime_UTR 30.0%
GTTGGATAATCAATTCCATA+AGG + chr7_4:2549129-2549148 None:intergenic 30.0%
AAATGGGAAGCAATATTTGT+TGG + chr7_4:2549314-2549333 None:intergenic 30.0%
TTCTCTAGACATTGAATTTG+AGG - chr7_4:2549350-2549369 Msa1135380:intron 30.0%
!! TGTCAAGTTGAATAATGAGT+TGG - chr7_4:2549392-2549411 Msa1135380:CDS 30.0%
GAAAGTAACCAGTAAATTTG+AGG + chr7_4:2549565-2549584 None:intergenic 30.0%
TTTAATTCTGGGCTCAAATA+TGG + chr7_4:2549775-2549794 None:intergenic 30.0%
TATTTGAGCCCAGAATTAAA+AGG - chr7_4:2549775-2549794 Msa1135380:intron 30.0%
ATTTGAGCCCAGAATTAAAA+GGG - chr7_4:2549776-2549795 Msa1135380:intron 30.0%
!! GTTTATGCCCTTTTAATTCT+GGG + chr7_4:2549786-2549805 None:intergenic 30.0%
!! AGTTTATGCCCTTTTAATTC+TGG + chr7_4:2549787-2549806 None:intergenic 30.0%
! AAAGGGCATAAACTTCTAAT+TGG - chr7_4:2549793-2549812 Msa1135380:intron 30.0%
ATTGGAATCCTTAATGATAC+AGG - chr7_4:2549838-2549857 Msa1135380:CDS 30.0%
ATTGATCTCCTGTATCATTA+AGG + chr7_4:2549849-2549868 None:intergenic 30.0%
TGCATTATATGAACTGGTAT+AGG + chr7_4:2549911-2549930 None:intergenic 30.0%
TGAGTATGCATTATATGAAC+TGG + chr7_4:2549917-2549936 None:intergenic 30.0%
TTTGTCGAATCTTTATGACA+TGG + chr7_4:2549966-2549985 None:intergenic 30.0%
TGTATTATTTAATCCTGCCA+AGG + chr7_4:2550050-2550069 None:intergenic 30.0%
!! CTTTTGTTTGCAGATAAATG+TGG - chr7_4:2550200-2550219 Msa1135380:intron 30.0%
! CGTCGATTAACGAATTTAAT+AGG - chr7_4:2550264-2550283 Msa1135380:intron 30.0%
CGATTAACGAATTTAATAGG+CGG - chr7_4:2550267-2550286 Msa1135380:intron 30.0%
! AGCTTTTGCTAAGTAAGAAT+TGG + chr7_4:2550487-2550506 None:intergenic 30.0%
!! GTAACATTTGTTCAAGTTGA+GGG + chr7_4:2550778-2550797 None:intergenic 30.0%
!! TGTAACATTTGTTCAAGTTG+AGG + chr7_4:2550779-2550798 None:intergenic 30.0%
GTATTATTACCATAAGCTGT+TGG + chr7_4:2550881-2550900 None:intergenic 30.0%
ATACATACAAGTCTCTGTTA+GGG + chr7_4:2551090-2551109 None:intergenic 30.0%
AATACATACAAGTCTCTGTT+AGG + chr7_4:2551091-2551110 None:intergenic 30.0%
! ACAGAGACTTGTATGTATTT+TGG - chr7_4:2551092-2551111 Msa1135380:CDS 30.0%
! CAGAGACTTGTATGTATTTT+GGG - chr7_4:2551093-2551112 Msa1135380:CDS 30.0%
AAAGGCAAATAGACTTATTG+TGG - chr7_4:2551135-2551154 Msa1135380:CDS 30.0%
GACCAAGATAATGATTGATA+AGG + chr7_4:2551254-2551273 None:intergenic 30.0%
!! GGTAGTTCTTAGTTTAGTTT+TGG - chr7_4:2548981-2549000 Msa1135380:three_prime_UTR 30.0%
!!! CTTAGTTTAGTTTTGGTGTT+AGG - chr7_4:2548988-2549007 Msa1135380:three_prime_UTR 30.0%
GTTGGATAATCAATTCCATA+AGG + chr7_4:2549129-2549148 None:intergenic 30.0%
AAATGGGAAGCAATATTTGT+TGG + chr7_4:2549314-2549333 None:intergenic 30.0%
TTCTCTAGACATTGAATTTG+AGG - chr7_4:2549350-2549369 Msa1135380:intron 30.0%
!! TGTCAAGTTGAATAATGAGT+TGG - chr7_4:2549392-2549411 Msa1135380:CDS 30.0%
GAAAGTAACCAGTAAATTTG+AGG + chr7_4:2549565-2549584 None:intergenic 30.0%
TTTAATTCTGGGCTCAAATA+TGG + chr7_4:2549775-2549794 None:intergenic 30.0%
TATTTGAGCCCAGAATTAAA+AGG - chr7_4:2549775-2549794 Msa1135380:intron 30.0%
ATTTGAGCCCAGAATTAAAA+GGG - chr7_4:2549776-2549795 Msa1135380:intron 30.0%
!! GTTTATGCCCTTTTAATTCT+GGG + chr7_4:2549786-2549805 None:intergenic 30.0%
!! AGTTTATGCCCTTTTAATTC+TGG + chr7_4:2549787-2549806 None:intergenic 30.0%
! AAAGGGCATAAACTTCTAAT+TGG - chr7_4:2549793-2549812 Msa1135380:intron 30.0%
ATTGGAATCCTTAATGATAC+AGG - chr7_4:2549838-2549857 Msa1135380:CDS 30.0%
ATTGATCTCCTGTATCATTA+AGG + chr7_4:2549849-2549868 None:intergenic 30.0%
TGCATTATATGAACTGGTAT+AGG + chr7_4:2549911-2549930 None:intergenic 30.0%
TGAGTATGCATTATATGAAC+TGG + chr7_4:2549917-2549936 None:intergenic 30.0%
TTTGTCGAATCTTTATGACA+TGG + chr7_4:2549966-2549985 None:intergenic 30.0%
TGTATTATTTAATCCTGCCA+AGG + chr7_4:2550050-2550069 None:intergenic 30.0%
!! CTTTTGTTTGCAGATAAATG+TGG - chr7_4:2550200-2550219 Msa1135380:intron 30.0%
! CGTCGATTAACGAATTTAAT+AGG - chr7_4:2550264-2550283 Msa1135380:intron 30.0%
CGATTAACGAATTTAATAGG+CGG - chr7_4:2550267-2550286 Msa1135380:intron 30.0%
! AGCTTTTGCTAAGTAAGAAT+TGG + chr7_4:2550487-2550506 None:intergenic 30.0%
!! GTAACATTTGTTCAAGTTGA+GGG + chr7_4:2550778-2550797 None:intergenic 30.0%
!! TGTAACATTTGTTCAAGTTG+AGG + chr7_4:2550779-2550798 None:intergenic 30.0%
GTATTATTACCATAAGCTGT+TGG + chr7_4:2550881-2550900 None:intergenic 30.0%
ATACATACAAGTCTCTGTTA+GGG + chr7_4:2551090-2551109 None:intergenic 30.0%
AATACATACAAGTCTCTGTT+AGG + chr7_4:2551091-2551110 None:intergenic 30.0%
! ACAGAGACTTGTATGTATTT+TGG - chr7_4:2551092-2551111 Msa1135380:CDS 30.0%
! CAGAGACTTGTATGTATTTT+GGG - chr7_4:2551093-2551112 Msa1135380:CDS 30.0%
AAAGGCAAATAGACTTATTG+TGG - chr7_4:2551135-2551154 Msa1135380:CDS 30.0%
GACCAAGATAATGATTGATA+AGG + chr7_4:2551254-2551273 None:intergenic 30.0%
!!! AGTTTAGTTTTGGTGTTAGG+TGG - chr7_4:2548991-2549010 Msa1135380:three_prime_UTR 35.0%
TTAGGTGGTATTGTTCCTAA+AGG - chr7_4:2549006-2549025 Msa1135380:exon 35.0%
GGATAATCAATTCCATAAGG+AGG + chr7_4:2549126-2549145 None:intergenic 35.0%
GAAACTTAGCTGATAAGATC+AGG + chr7_4:2549192-2549211 None:intergenic 35.0%
! AAGTTGAATAATGAGTTGGC+CGG - chr7_4:2549396-2549415 Msa1135380:CDS 35.0%
!!! CTTCTAATTGGTGCCAATTT+TGG - chr7_4:2549805-2549824 Msa1135380:CDS 35.0%
AATTCCAGCTGAACCAAAAT+TGG + chr7_4:2549821-2549840 None:intergenic 35.0%
!!! AATTTTGGTTCAGCTGGAAT+TGG - chr7_4:2549820-2549839 Msa1135380:CDS 35.0%
! GATTCGACAAAGTTTTACGT+TGG - chr7_4:2549975-2549994 Msa1135380:CDS 35.0%
TAAAAGGAGAGAGTTGTGTT+AGG + chr7_4:2550010-2550029 None:intergenic 35.0%
GGTAAAAATGCATACACAAC+TGG - chr7_4:2550221-2550240 Msa1135380:intron 35.0%
TAACGAATTTAATAGGCGGT+CGG - chr7_4:2550271-2550290 Msa1135380:intron 35.0%
!! CATAGTGTGGTAATGGATAT+TGG + chr7_4:2550398-2550417 None:intergenic 35.0%
AACTTGACATAGTGTGGTAA+TGG + chr7_4:2550405-2550424 None:intergenic 35.0%
! TGAAAAGGTGAGTTTTACTG+TGG + chr7_4:2550537-2550556 None:intergenic 35.0%
TCTTACGAAACTTATTGCAG+AGG - chr7_4:2550618-2550637 Msa1135380:intron 35.0%
ATTGCAGAGGCTATATGATT+TGG - chr7_4:2550631-2550650 Msa1135380:intron 35.0%
TTGCAGAGGCTATATGATTT+GGG - chr7_4:2550632-2550651 Msa1135380:intron 35.0%
CAAAGACTCAATAGGAAACT+TGG - chr7_4:2550797-2550816 Msa1135380:intron 35.0%
GTTACTAATCCAACAGCTTA+TGG - chr7_4:2550869-2550888 Msa1135380:intron 35.0%
!! ACATCAAAAGTAGCTTGTTG+TGG - chr7_4:2551013-2551032 Msa1135380:intron 35.0%
!! CATCAAAAGTAGCTTGTTGT+GGG - chr7_4:2551014-2551033 Msa1135380:intron 35.0%
! TATTTGCCTTTTCAGATGGA+TGG + chr7_4:2551126-2551145 None:intergenic 35.0%
! AGTCTATTTGCCTTTTCAGA+TGG + chr7_4:2551130-2551149 None:intergenic 35.0%
ATTGTGGAGCAAATTATGTC+AGG - chr7_4:2551151-2551170 Msa1135380:CDS 35.0%
! GGCCTTATCAATCATTATCT+TGG - chr7_4:2551249-2551268 Msa1135380:CDS 35.0%
!!! AGTTTAGTTTTGGTGTTAGG+TGG - chr7_4:2548991-2549010 Msa1135380:three_prime_UTR 35.0%
TTAGGTGGTATTGTTCCTAA+AGG - chr7_4:2549006-2549025 Msa1135380:exon 35.0%
GGATAATCAATTCCATAAGG+AGG + chr7_4:2549126-2549145 None:intergenic 35.0%
GAAACTTAGCTGATAAGATC+AGG + chr7_4:2549192-2549211 None:intergenic 35.0%
! AAGTTGAATAATGAGTTGGC+CGG - chr7_4:2549396-2549415 Msa1135380:CDS 35.0%
!!! CTTCTAATTGGTGCCAATTT+TGG - chr7_4:2549805-2549824 Msa1135380:CDS 35.0%
AATTCCAGCTGAACCAAAAT+TGG + chr7_4:2549821-2549840 None:intergenic 35.0%
!!! AATTTTGGTTCAGCTGGAAT+TGG - chr7_4:2549820-2549839 Msa1135380:CDS 35.0%
! GATTCGACAAAGTTTTACGT+TGG - chr7_4:2549975-2549994 Msa1135380:CDS 35.0%
TAAAAGGAGAGAGTTGTGTT+AGG + chr7_4:2550010-2550029 None:intergenic 35.0%
GGTAAAAATGCATACACAAC+TGG - chr7_4:2550221-2550240 Msa1135380:intron 35.0%
TAACGAATTTAATAGGCGGT+CGG - chr7_4:2550271-2550290 Msa1135380:intron 35.0%
!! CATAGTGTGGTAATGGATAT+TGG + chr7_4:2550398-2550417 None:intergenic 35.0%
AACTTGACATAGTGTGGTAA+TGG + chr7_4:2550405-2550424 None:intergenic 35.0%
! TGAAAAGGTGAGTTTTACTG+TGG + chr7_4:2550537-2550556 None:intergenic 35.0%
TCTTACGAAACTTATTGCAG+AGG - chr7_4:2550618-2550637 Msa1135380:intron 35.0%
ATTGCAGAGGCTATATGATT+TGG - chr7_4:2550631-2550650 Msa1135380:intron 35.0%
TTGCAGAGGCTATATGATTT+GGG - chr7_4:2550632-2550651 Msa1135380:intron 35.0%
CAAAGACTCAATAGGAAACT+TGG - chr7_4:2550797-2550816 Msa1135380:intron 35.0%
GTTACTAATCCAACAGCTTA+TGG - chr7_4:2550869-2550888 Msa1135380:intron 35.0%
!! ACATCAAAAGTAGCTTGTTG+TGG - chr7_4:2551013-2551032 Msa1135380:intron 35.0%
!! CATCAAAAGTAGCTTGTTGT+GGG - chr7_4:2551014-2551033 Msa1135380:intron 35.0%
! TATTTGCCTTTTCAGATGGA+TGG + chr7_4:2551126-2551145 None:intergenic 35.0%
! AGTCTATTTGCCTTTTCAGA+TGG + chr7_4:2551130-2551149 None:intergenic 35.0%
ATTGTGGAGCAAATTATGTC+AGG - chr7_4:2551151-2551170 Msa1135380:CDS 35.0%
! GGCCTTATCAATCATTATCT+TGG - chr7_4:2551249-2551268 Msa1135380:CDS 35.0%
TTGTTCCTAAAGGTGAAGCT+AGG - chr7_4:2549016-2549035 Msa1135380:exon 40.0%
GGAGATTCACTTGTCGATAA+TGG - chr7_4:2549060-2549079 Msa1135380:CDS 40.0%
CCATTTGAAAAACGACCAGT+TGG + chr7_4:2549159-2549178 None:intergenic 40.0%
!!! CCAACTGGTCGTTTTTCAAA+TGG - chr7_4:2549156-2549175 Msa1135380:CDS 40.0%
TTGACACTTCATCTAGTGAC+CGG + chr7_4:2549418-2549437 None:intergenic 40.0%
TGAACTGGTATAGGTAGCAA+AGG + chr7_4:2549902-2549921 None:intergenic 40.0%
!! AAGTTTTACGTTGGTTGTCG+AGG - chr7_4:2549984-2550003 Msa1135380:CDS 40.0%
TTATTTAATCCTGCCAAGGC+CGG + chr7_4:2550046-2550065 None:intergenic 40.0%
! GCATTGTTTCTCATGACAGT+TGG - chr7_4:2550318-2550337 Msa1135380:intron 40.0%
! TTGTTTCTCATGACAGTTGG+AGG - chr7_4:2550321-2550340 Msa1135380:intron 40.0%
ATGAGGAACTTGACATAGTG+TGG + chr7_4:2550411-2550430 None:intergenic 40.0%
GCTTTCTGTACTCACAAATG+AGG + chr7_4:2550428-2550447 None:intergenic 40.0%
!! TGAGTACAGAAAGCACTTAC+AGG - chr7_4:2550434-2550453 Msa1135380:CDS 40.0%
!! GTGAGTTTTACTGTGGACTA+TGG + chr7_4:2550530-2550549 None:intergenic 40.0%
TAGCAGAAATGGTGAATGCT+CGG - chr7_4:2550721-2550740 Msa1135380:intron 40.0%
CACACTCCAATGCCATTATA+GGG + chr7_4:2551046-2551065 None:intergenic 40.0%
TCCATTCCATCCATCTGAAA+AGG - chr7_4:2551117-2551136 Msa1135380:CDS 40.0%
! AGAATGGTGCTAAGGTTCAT+TGG + chr7_4:2551196-2551215 None:intergenic 40.0%
! CCAAAGAAAGAATGGTGCTA+AGG + chr7_4:2551204-2551223 None:intergenic 40.0%
CCTTAGCACCATTCTTTCTT+TGG - chr7_4:2551201-2551220 Msa1135380:CDS 40.0%
GCTAGCATCCAAAGAAAGAA+TGG + chr7_4:2551212-2551231 None:intergenic 40.0%
TTGTTCCTAAAGGTGAAGCT+AGG - chr7_4:2549016-2549035 Msa1135380:exon 40.0%
GGAGATTCACTTGTCGATAA+TGG - chr7_4:2549060-2549079 Msa1135380:CDS 40.0%
CCATTTGAAAAACGACCAGT+TGG + chr7_4:2549159-2549178 None:intergenic 40.0%
!!! CCAACTGGTCGTTTTTCAAA+TGG - chr7_4:2549156-2549175 Msa1135380:CDS 40.0%
TTGACACTTCATCTAGTGAC+CGG + chr7_4:2549418-2549437 None:intergenic 40.0%
TGAACTGGTATAGGTAGCAA+AGG + chr7_4:2549902-2549921 None:intergenic 40.0%
!! AAGTTTTACGTTGGTTGTCG+AGG - chr7_4:2549984-2550003 Msa1135380:CDS 40.0%
TTATTTAATCCTGCCAAGGC+CGG + chr7_4:2550046-2550065 None:intergenic 40.0%
! GCATTGTTTCTCATGACAGT+TGG - chr7_4:2550318-2550337 Msa1135380:intron 40.0%
! TTGTTTCTCATGACAGTTGG+AGG - chr7_4:2550321-2550340 Msa1135380:intron 40.0%
ATGAGGAACTTGACATAGTG+TGG + chr7_4:2550411-2550430 None:intergenic 40.0%
GCTTTCTGTACTCACAAATG+AGG + chr7_4:2550428-2550447 None:intergenic 40.0%
!! TGAGTACAGAAAGCACTTAC+AGG - chr7_4:2550434-2550453 Msa1135380:CDS 40.0%
!! GTGAGTTTTACTGTGGACTA+TGG + chr7_4:2550530-2550549 None:intergenic 40.0%
TAGCAGAAATGGTGAATGCT+CGG - chr7_4:2550721-2550740 Msa1135380:intron 40.0%
CACACTCCAATGCCATTATA+GGG + chr7_4:2551046-2551065 None:intergenic 40.0%
TCCATTCCATCCATCTGAAA+AGG - chr7_4:2551117-2551136 Msa1135380:CDS 40.0%
! AGAATGGTGCTAAGGTTCAT+TGG + chr7_4:2551196-2551215 None:intergenic 40.0%
! CCAAAGAAAGAATGGTGCTA+AGG + chr7_4:2551204-2551223 None:intergenic 40.0%
CCTTAGCACCATTCTTTCTT+TGG - chr7_4:2551201-2551220 Msa1135380:CDS 40.0%
GCTAGCATCCAAAGAAAGAA+TGG + chr7_4:2551212-2551231 None:intergenic 40.0%
CTTCTCCTAGCTTCACCTTT+AGG + chr7_4:2549024-2549043 None:intergenic 45.0%
TATCCAACTCGTAGACCAAC+TGG - chr7_4:2549141-2549160 Msa1135380:CDS 45.0%
CCAAGTTGCTGACCTGAAAA+AGG + chr7_4:2549736-2549755 None:intergenic 45.0%
!!! CCTTTTTCAGGTCAGCAACT+TGG - chr7_4:2549733-2549752 Msa1135380:intron 45.0%
! CACAACTCTCTCCTTTTACC+CGG - chr7_4:2550012-2550031 Msa1135380:CDS 45.0%
! ACAACTCTCTCCTTTTACCC+GGG - chr7_4:2550013-2550032 Msa1135380:CDS 45.0%
ACCTTGTGCCTTCTTCTTCA+AGG - chr7_4:2550367-2550386 Msa1135380:intron 45.0%
! ACCTTGAAGAAGAAGGCACA+AGG + chr7_4:2550371-2550390 None:intergenic 45.0%
!! AAAGTAGCTTGTTGTGGGCA+AGG - chr7_4:2551019-2551038 Msa1135380:intron 45.0%
CAAGGACCCTATAATGGCAT+TGG - chr7_4:2551037-2551056 Msa1135380:intron 45.0%
GCACACTCCAATGCCATTAT+AGG + chr7_4:2551047-2551066 None:intergenic 45.0%
! GCCTTTTCAGATGGATGGAA+TGG + chr7_4:2551121-2551140 None:intergenic 45.0%
CTTCTCCTAGCTTCACCTTT+AGG + chr7_4:2549024-2549043 None:intergenic 45.0%
TATCCAACTCGTAGACCAAC+TGG - chr7_4:2549141-2549160 Msa1135380:CDS 45.0%
CCAAGTTGCTGACCTGAAAA+AGG + chr7_4:2549736-2549755 None:intergenic 45.0%
!!! CCTTTTTCAGGTCAGCAACT+TGG - chr7_4:2549733-2549752 Msa1135380:intron 45.0%
! CACAACTCTCTCCTTTTACC+CGG - chr7_4:2550012-2550031 Msa1135380:CDS 45.0%
! ACAACTCTCTCCTTTTACCC+GGG - chr7_4:2550013-2550032 Msa1135380:CDS 45.0%
ACCTTGTGCCTTCTTCTTCA+AGG - chr7_4:2550367-2550386 Msa1135380:intron 45.0%
! ACCTTGAAGAAGAAGGCACA+AGG + chr7_4:2550371-2550390 None:intergenic 45.0%
!! AAAGTAGCTTGTTGTGGGCA+AGG - chr7_4:2551019-2551038 Msa1135380:intron 45.0%
CAAGGACCCTATAATGGCAT+TGG - chr7_4:2551037-2551056 Msa1135380:intron 45.0%
GCACACTCCAATGCCATTAT+AGG + chr7_4:2551047-2551066 None:intergenic 45.0%
! GCCTTTTCAGATGGATGGAA+TGG + chr7_4:2551121-2551140 None:intergenic 45.0%
!! AAAAAAAATTATAAAGTTAT+TGG - chr7_4:2550087-2550106 Msa1135380:intron 5.0%
!! AAAAAAAATTATAAAGTTAT+TGG - chr7_4:2550087-2550106 Msa1135380:intron 5.0%
!! CGTGCTGATTCTCCTCCTTA+TGG - chr7_4:2549111-2549130 Msa1135380:CDS 50.0%
!!! GGTGCCAATTTTGGTTCAGC+TGG - chr7_4:2549814-2549833 Msa1135380:CDS 50.0%
CGAATTTAATAGGCGGTCGG+CGG - chr7_4:2550274-2550293 Msa1135380:intron 50.0%
TGGCGAGACCTTGAAGAAGA+AGG + chr7_4:2550378-2550397 None:intergenic 50.0%
! GGCTATATGATTTGGGCGCT+CGG - chr7_4:2550639-2550658 Msa1135380:intron 50.0%
ACAACCCAATGGTCCTGTTC+CGG + chr7_4:2550678-2550697 None:intergenic 50.0%
CAGAAATGGTGAATGCTCGG+TGG - chr7_4:2550724-2550743 Msa1135380:intron 50.0%
TGTGGGCAAGGACCCTATAA+TGG - chr7_4:2551031-2551050 Msa1135380:intron 50.0%
GTCTCTGTTAGGGCACAAGT+TGG + chr7_4:2551080-2551099 None:intergenic 50.0%
!! CGTGCTGATTCTCCTCCTTA+TGG - chr7_4:2549111-2549130 Msa1135380:CDS 50.0%
!!! GGTGCCAATTTTGGTTCAGC+TGG - chr7_4:2549814-2549833 Msa1135380:CDS 50.0%
CGAATTTAATAGGCGGTCGG+CGG - chr7_4:2550274-2550293 Msa1135380:intron 50.0%
TGGCGAGACCTTGAAGAAGA+AGG + chr7_4:2550378-2550397 None:intergenic 50.0%
! GGCTATATGATTTGGGCGCT+CGG - chr7_4:2550639-2550658 Msa1135380:intron 50.0%
ACAACCCAATGGTCCTGTTC+CGG + chr7_4:2550678-2550697 None:intergenic 50.0%
CAGAAATGGTGAATGCTCGG+TGG - chr7_4:2550724-2550743 Msa1135380:intron 50.0%
TGTGGGCAAGGACCCTATAA+TGG - chr7_4:2551031-2551050 Msa1135380:intron 50.0%
GTCTCTGTTAGGGCACAAGT+TGG + chr7_4:2551080-2551099 None:intergenic 50.0%
! CGACCAGTTGGTCTACGAGT+TGG + chr7_4:2549147-2549166 None:intergenic 55.0%
! TCTCTCCTTTTACCCGGGCT+TGG - chr7_4:2550018-2550037 Msa1135380:CDS 55.0%
! CTCTCCTTTTACCCGGGCTT+GGG - chr7_4:2550019-2550038 Msa1135380:CDS 55.0%
! CGAGTTCTAGTCACCGGAAC+AGG - chr7_4:2550662-2550681 Msa1135380:intron 55.0%
AGTCACCGGAACAGGACCAT+TGG - chr7_4:2550670-2550689 Msa1135380:intron 55.0%
GTCACCGGAACAGGACCATT+GGG - chr7_4:2550671-2550690 Msa1135380:intron 55.0%
! TCTGCAGGAGCACAACCCAA+TGG + chr7_4:2550689-2550708 None:intergenic 55.0%
CTCGCTACGCGTAGCAGAAA+TGG - chr7_4:2550710-2550729 Msa1135380:intron 55.0%
! TGCTCGGTGGAACTACAACG+TGG - chr7_4:2550737-2550756 Msa1135380:intron 55.0%
! CGACCAGTTGGTCTACGAGT+TGG + chr7_4:2549147-2549166 None:intergenic 55.0%
! TCTCTCCTTTTACCCGGGCT+TGG - chr7_4:2550018-2550037 Msa1135380:CDS 55.0%
! CTCTCCTTTTACCCGGGCTT+GGG - chr7_4:2550019-2550038 Msa1135380:CDS 55.0%
! CGAGTTCTAGTCACCGGAAC+AGG - chr7_4:2550662-2550681 Msa1135380:intron 55.0%
AGTCACCGGAACAGGACCAT+TGG - chr7_4:2550670-2550689 Msa1135380:intron 55.0%
GTCACCGGAACAGGACCATT+GGG - chr7_4:2550671-2550690 Msa1135380:intron 55.0%
! TCTGCAGGAGCACAACCCAA+TGG + chr7_4:2550689-2550708 None:intergenic 55.0%
CTCGCTACGCGTAGCAGAAA+TGG - chr7_4:2550710-2550729 Msa1135380:intron 55.0%
! TGCTCGGTGGAACTACAACG+TGG - chr7_4:2550737-2550756 Msa1135380:intron 55.0%
! CTTTTACCCGGGCTTGGGAC+CGG - chr7_4:2550024-2550043 Msa1135380:CDS 60.0%
! GCTCGGCGAGTTCTAGTCAC+CGG - chr7_4:2550656-2550675 Msa1135380:intron 60.0%
CTACGCGTAGCGAGTTCTGC+AGG + chr7_4:2550704-2550723 None:intergenic 60.0%
! CTTTTACCCGGGCTTGGGAC+CGG - chr7_4:2550024-2550043 Msa1135380:CDS 60.0%
! GCTCGGCGAGTTCTAGTCAC+CGG - chr7_4:2550656-2550675 Msa1135380:intron 60.0%
CTACGCGTAGCGAGTTCTGC+AGG + chr7_4:2550704-2550723 None:intergenic 60.0%
CGGTCCCAAGCCCGGGTAAA+AGG + chr7_4:2550026-2550045 None:intergenic 65.0%
CGGTCCCAAGCCCGGGTAAA+AGG + chr7_4:2550026-2550045 None:intergenic 65.0%
CCAAGGCCGGTCCCAAGCCC+GGG + chr7_4:2550033-2550052 None:intergenic 75.0%
GCCAAGGCCGGTCCCAAGCC+CGG + chr7_4:2550034-2550053 None:intergenic 75.0%
GGCTTGGGACCGGCCTTGGC+AGG - chr7_4:2550034-2550053 Msa1135380:intron 75.0%
CCAAGGCCGGTCCCAAGCCC+GGG + chr7_4:2550033-2550052 None:intergenic 75.0%
GCCAAGGCCGGTCCCAAGCC+CGG + chr7_4:2550034-2550053 None:intergenic 75.0%
GGCTTGGGACCGGCCTTGGC+AGG - chr7_4:2550034-2550053 Msa1135380:intron 75.0%
! CCCGGGCTTGGGACCGGCCT+TGG - chr7_4:2550030-2550049 Msa1135380:intron 80.0%
! CCCGGGCTTGGGACCGGCCT+TGG - chr7_4:2550030-2550049 Msa1135380:intron 80.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 2548949 2551307 2548949 ID=Msa1135380;Name=Msa1135380
chr7_4 mRNA 2548949 2551307 2548949 ID=Msa1135380-mRNA-1;Parent=Msa1135380;Name=Msa1135380-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.75|0.8|1|0.75|0.8|5|70|357
chr7_4 exon 2548949 2549251 2548949 ID=Msa1135380-mRNA-1:exon:833;Parent=Msa1135380-mRNA-1
chr7_4 exon 2549366 2549618 2549366 ID=Msa1135380-mRNA-1:exon:832;Parent=Msa1135380-mRNA-1
chr7_4 exon 2549801 2550043 2549801 ID=Msa1135380-mRNA-1:exon:831;Parent=Msa1135380-mRNA-1
chr7_4 exon 2550386 2550513 2550386 ID=Msa1135380-mRNA-1:exon:830;Parent=Msa1135380-mRNA-1
chr7_4 exon 2551091 2551307 2551091 ID=Msa1135380-mRNA-1:exon:829;Parent=Msa1135380-mRNA-1
chr7_4 CDS 2551091 2551307 2551091 ID=Msa1135380-mRNA-1:cds;Parent=Msa1135380-mRNA-1
chr7_4 CDS 2550386 2550513 2550386 ID=Msa1135380-mRNA-1:cds;Parent=Msa1135380-mRNA-1
chr7_4 CDS 2549801 2550043 2549801 ID=Msa1135380-mRNA-1:cds;Parent=Msa1135380-mRNA-1
chr7_4 CDS 2549366 2549618 2549366 ID=Msa1135380-mRNA-1:cds;Parent=Msa1135380-mRNA-1
chr7_4 CDS 2549019 2549251 2549019 ID=Msa1135380-mRNA-1:cds;Parent=Msa1135380-mRNA-1
chr7_4 three_prime_UTR 2548949 2549018 2548949 ID=Msa1135380-mRNA-1:three_prime_utr;Parent=Msa1135380-mRNA-1
Gene Sequence

>Msa1135380

ATGGCACCATCTTCAAGTTTTGTTCATATTATGGTAGTTCTTAGTTTAGTTTTGGTGTTAGGTGGTATTGTTCCTAAAGGTGAAGCTAGGAGAAGAGCTTTTTTTGTATTTGGAGATTCACTTGTCGATAATGGAAATAACAACTATTTGCTTACTACTGCTCGTGCTGATTCTCCTCCTTATGGAATTGATTATCCAACTCGTAGACCAACTGGTCGTCAGCAACTTGGAACTGTGTCTACTTTACCATATTTGAGCCCAGAATTAAAAGGGCATAAACTTCTAATTGGTGCCAATTTTGGTTCAGCTGGAATTGGAATCCTTAATGATACAGGAGATCAATTTATAAATGTGGTAAAAATGCATACACAACTGGATTACTTTGAAGAGTATCAACGTCGATTAACGAATTTAATAGGCGGTCGGCGGACTAGAAGACTTGTTAATCAAGCATTGTTTCTCATGACAGTTGGAGGCAATGATTTTGTAAACAACTATTACCTTGTGCCTTCTTCTTCAAGGTCTCGCCAATATCCATTACCACACTATGTCAAGTTCCTCATTTGTGAGTACAGAAAGCACTTACAGAGGCTATATGATTTGGGCGCTCGGCGAGTTCTAGTCACCGGAACAGGACCATTGGGTTGTGCTCCTGCAGAACTCGCTACGCGTAGCAGAAATGGTGAATGCTCGGTGGAACTACAACGTGGTGCAGCATTATACAACCCTCAACTTGAACAAATGTTACAAAGACTCAATAGGAAACTTGGCAGTGACATTTTCATTGCTGCAAATACAGCACAAATGCACAAAGATTTTGTTACTAATCCAACAGCTTATGGATTTGTTACATCAAAAGTAGCTTGTTGTGGGCAAGGACCCTATAATGGCATTGGAGTGTGCACAACATGCTCCAACTTGTGCCCTAACAGAGACTTGTATGTATTTTGGGATCCATTCCATCCATCTGAAAAGGCAAATAGACTTATTGTGGAGCAAATTATGTCAGGTTCAACAAGATACATGAAGCCAATGAACCTTAGCACCATTCTTTCTTTGGATGCTAGCACATGA
Protein sequence

>Msa1135380

MAPSSSFVHIMVVLSLVLVLGGIVPKGEARRRAFFVFGDSLVDNGNNNYLLTTARADSPPYGIDYPTRRPTGRQQLGTVSTLPYLSPELKGHKLLIGANFGSAGIGILNDTGDQFINVVKMHTQLDYFEEYQRRLTNLIGGRRTRRLVNQALFLMTVGGNDFVNNYYLVPSSSRSRQYPLPHYVKFLICEYRKHLQRLYDLGARRVLVTGTGPLGCAPAELATRSRNGECSVELQRGAALYNPQLEQMLQRLNRKLGSDIFIAANTAQMHKDFVTNPTAYGFVTSKVACCGQGPYNGIGVCTTCSNLCPNRDLYVFWDPFHPSEKANRLIVEQIMSGSTRYMKPMNLSTILSLDAST*