Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006980 | Msa0999300 | 0.854940 | 8.808047e-62 | -8.615850e-47 |
| Msa0015710 | Msa0999300 | 0.824469 | 7.937416e-54 | -8.615850e-47 |
| Msa0016120 | Msa0999300 | 0.852240 | 5.257727e-61 | -8.615850e-47 |
| Msa0019600 | Msa0999300 | 0.874369 | 7.129115e-68 | -8.615850e-47 |
| Msa0050040 | Msa0999300 | 0.836851 | 7.344330e-57 | -8.615850e-47 |
| Msa0055450 | Msa0999300 | 0.822761 | 1.993105e-53 | -8.615850e-47 |
| Msa0066320 | Msa0999300 | 0.806570 | 7.715337e-50 | -8.615850e-47 |
| Msa0080990 | Msa0999300 | 0.849686 | 2.756889e-60 | -8.615850e-47 |
| Msa0084000 | Msa0999300 | 0.840081 | 1.077986e-57 | -8.615850e-47 |
| Msa0084500 | Msa0999300 | 0.808207 | 3.468530e-50 | -8.615850e-47 |
| Msa0098440 | Msa0999300 | 0.816307 | 5.916772e-52 | -8.615850e-47 |
| Msa0102990 | Msa0999300 | 0.836328 | 9.979603e-57 | -8.615850e-47 |
| Msa0109880 | Msa0999300 | 0.865364 | 6.230369e-65 | -8.615850e-47 |
| Msa0111750 | Msa0999300 | 0.827846 | 1.248747e-54 | -8.615850e-47 |
| Msa0625890 | Msa0999300 | 0.801308 | 9.574695e-49 | -8.615850e-47 |
| Msa0641250 | Msa0999300 | 0.840018 | 1.119293e-57 | -8.615850e-47 |
| Msa0663680 | Msa0999300 | 0.813177 | 2.920080e-51 | -8.615850e-47 |
| Msa0666210 | Msa0999300 | 0.806100 | 9.693334e-50 | -8.615850e-47 |
| Msa0669840 | Msa0999300 | 0.900352 | 7.985977e-78 | -8.615850e-47 |
| Msa0680150 | Msa0999300 | 0.817458 | 3.263727e-52 | -8.615850e-47 |
| Msa0685330 | Msa0999300 | 0.807546 | 4.795770e-50 | -8.615850e-47 |
| Msa0688500 | Msa0999300 | 0.816716 | 4.790340e-52 | -8.615850e-47 |
| Msa0707220 | Msa0999300 | 0.810115 | 1.353043e-50 | -8.615850e-47 |
| Msa0709450 | Msa0999300 | 0.818858 | 1.574321e-52 | -8.615850e-47 |
| Msa0711320 | Msa0999300 | 0.815262 | 1.011855e-51 | -8.615850e-47 |
| Msa0720040 | Msa0999300 | 0.810543 | 1.093934e-50 | -8.615850e-47 |
| Msa0725860 | Msa0999300 | 0.837587 | 4.761133e-57 | -8.615850e-47 |
| Msa0737190 | Msa0999300 | 0.820364 | 7.130761e-53 | -8.615850e-47 |
| Msa0739580 | Msa0999300 | 0.876186 | 1.705784e-68 | -8.615850e-47 |
| Msa0742180 | Msa0999300 | 0.816833 | 4.510317e-52 | -8.615850e-47 |
| Msa0748000 | Msa0999300 | 0.848521 | 5.813869e-60 | -8.615850e-47 |
| Msa0752840 | Msa0999300 | 0.810668 | 1.028027e-50 | -8.615850e-47 |
| Msa0764820 | Msa0999300 | 0.838400 | 2.941930e-57 | -8.615850e-47 |
| Msa0770290 | Msa0999300 | 0.834342 | 3.168607e-56 | -8.615850e-47 |
| Msa0775700 | Msa0999300 | 0.801342 | 9.418986e-49 | -8.615850e-47 |
| Msa0778930 | Msa0999300 | 0.834891 | 2.305858e-56 | -8.615850e-47 |
| Msa0782360 | Msa0999300 | 0.844243 | 8.527793e-59 | -8.615850e-47 |
| Msa0786040 | Msa0999300 | 0.819862 | 9.295789e-53 | -8.615850e-47 |
| Msa0807110 | Msa0999300 | 0.800047 | 1.730652e-48 | -8.615850e-47 |
| Msa0816450 | Msa0999300 | 0.805426 | 1.342416e-49 | -8.615850e-47 |
| Msa0819890 | Msa0999300 | 0.811080 | 8.370768e-51 | -8.615850e-47 |
| Msa0823400 | Msa0999300 | 0.840317 | 9.354287e-58 | -8.615850e-47 |
| Msa0828830 | Msa0999300 | 0.879632 | 1.063874e-69 | -8.615850e-47 |
| Msa0831940 | Msa0999300 | 0.813754 | 2.181238e-51 | -8.615850e-47 |
| Msa0833040 | Msa0999300 | 0.802397 | 5.720659e-49 | -8.615850e-47 |
| Msa0840500 | Msa0999300 | 0.834631 | 2.681280e-56 | -8.615850e-47 |
| Msa0841320 | Msa0999300 | 0.806074 | 9.813129e-50 | -8.615850e-47 |
| Msa0124130 | Msa0999300 | 0.880586 | 4.858526e-70 | -8.615850e-47 |
| Msa0141120 | Msa0999300 | 0.825023 | 5.875953e-54 | -8.615850e-47 |
| Msa0141600 | Msa0999300 | 0.816968 | 4.207087e-52 | -8.615850e-47 |
| Msa0147600 | Msa0999300 | 0.825058 | 5.764978e-54 | -8.615850e-47 |
| Msa0149140 | Msa0999300 | 0.873261 | 1.686596e-67 | -8.615850e-47 |
| Msa0152480 | Msa0999300 | 0.800639 | 1.311745e-48 | -8.615850e-47 |
| Msa0152500 | Msa0999300 | 0.822465 | 2.334958e-53 | -8.615850e-47 |
| Msa0156250 | Msa0999300 | 0.880560 | 4.963819e-70 | -8.615850e-47 |
| Msa0176470 | Msa0999300 | 0.824364 | 8.403604e-54 | -8.615850e-47 |
| Msa0185490 | Msa0999300 | 0.852641 | 4.040791e-61 | -8.615850e-47 |
| Msa0194380 | Msa0999300 | 0.806000 | 1.017095e-49 | -8.615850e-47 |
| Msa0197100 | Msa0999300 | 0.801246 | 9.859266e-49 | -8.615850e-47 |
| Msa0197930 | Msa0999300 | 0.817649 | 2.956314e-52 | -8.615850e-47 |
| Msa0203030 | Msa0999300 | 0.815727 | 7.973291e-52 | -8.615850e-47 |
| Msa0212150 | Msa0999300 | 0.865335 | 6.362564e-65 | -8.615850e-47 |
| Msa0215640 | Msa0999300 | 0.820709 | 5.943014e-53 | -8.615850e-47 |
| Msa0219190 | Msa0999300 | 0.851935 | 6.418424e-61 | -8.615850e-47 |
| Msa0221290 | Msa0999300 | 0.817723 | 2.844584e-52 | -8.615850e-47 |
| Msa0236110 | Msa0999300 | 0.805494 | 1.298994e-49 | -8.615850e-47 |
| Msa0373960 | Msa0999300 | 0.831653 | 1.477529e-55 | -8.615850e-47 |
| Msa0375680 | Msa0999300 | 0.838220 | 3.273377e-57 | -8.615850e-47 |
| Msa0382010 | Msa0999300 | 0.834599 | 2.730486e-56 | -8.615850e-47 |
| Msa0392420 | Msa0999300 | 0.843293 | 1.531375e-58 | -8.615850e-47 |
| Msa0392460 | Msa0999300 | 0.842213 | 2.966947e-58 | -8.615850e-47 |
| Msa0392490 | Msa0999300 | 0.835265 | 1.855745e-56 | -8.615850e-47 |
| Msa0406000 | Msa0999300 | 0.915581 | 4.964213e-85 | -8.615850e-47 |
| Msa0423100 | Msa0999300 | 0.817187 | 3.754820e-52 | -8.615850e-47 |
| Msa0424330 | Msa0999300 | 0.855241 | 7.201770e-62 | -8.615850e-47 |
| Msa0424340 | Msa0999300 | 0.876192 | 1.697574e-68 | -8.615850e-47 |
| Msa0424350 | Msa0999300 | 0.860239 | 2.372923e-63 | -8.615850e-47 |
| Msa0436500 | Msa0999300 | 0.814841 | 1.254754e-51 | -8.615850e-47 |
| Msa0441590 | Msa0999300 | 0.827199 | 1.785276e-54 | -8.615850e-47 |
| Msa0451400 | Msa0999300 | 0.912902 | 1.142441e-83 | -8.615850e-47 |
| Msa0464540 | Msa0999300 | 0.809718 | 1.647571e-50 | -8.615850e-47 |
| Msa0469260 | Msa0999300 | 0.807150 | 5.817919e-50 | -8.615850e-47 |
| Msa0471240 | Msa0999300 | 0.814371 | 1.593861e-51 | -8.615850e-47 |
| Msa0996270 | Msa0999300 | 0.836732 | 7.875466e-57 | -8.615850e-47 |
| Msa0999300 | Msa0999320 | 0.819063 | 1.413868e-52 | -8.615850e-47 |
| Msa0999300 | Msa0999340 | 0.800297 | 1.539975e-48 | -8.615850e-47 |
| Msa0999300 | Msa0999350 | 0.834818 | 2.405314e-56 | -8.615850e-47 |
| Msa0999300 | Msa0999360 | 0.844037 | 9.686691e-59 | -8.615850e-47 |
| Msa0999300 | Msa0999400 | 0.823973 | 1.038221e-53 | -8.615850e-47 |
| Msa0999300 | Msa0999410 | 0.847204 | 1.341138e-59 | -8.615850e-47 |
| Msa0999300 | Msa0999700 | 0.813899 | 2.025961e-51 | -8.615850e-47 |
| Msa0999300 | Msa1001870 | 0.820202 | 7.768971e-53 | -8.615850e-47 |
| Msa0999300 | Msa1001890 | 0.948563 | 7.357542e-107 | -8.615850e-47 |
| Msa0999300 | Msa1005360 | 0.809271 | 2.055372e-50 | -8.615850e-47 |
| Msa0999300 | Msa1037770 | 0.846652 | 1.898122e-59 | -8.615850e-47 |
| Msa0999300 | Msa1037890 | 0.873504 | 1.397143e-67 | -8.615850e-47 |
| Msa0999300 | Msa1037900 | 0.874170 | 8.324754e-68 | -8.615850e-47 |
| Msa0999300 | Msa1037910 | 0.866071 | 3.728397e-65 | -8.615850e-47 |
| Msa0999300 | Msa1041530 | 0.844695 | 6.446404e-59 | -8.615850e-47 |
| Msa0999300 | Msa1042670 | 0.825674 | 4.120472e-54 | -8.615850e-47 |
| Msa0999300 | Msa1052360 | 0.802183 | 6.331721e-49 | -8.615850e-47 |
| Msa0999300 | Msa1073340 | 0.809106 | 2.229531e-50 | -8.615850e-47 |
| Msa0999300 | Msa1077180 | 0.811250 | 7.690320e-51 | -8.615850e-47 |
| Msa0999300 | Msa1081570 | 0.853217 | 2.765666e-61 | -8.615850e-47 |
| Msa0999300 | Msa1084520 | 0.839593 | 1.444161e-57 | -8.615850e-47 |
| Msa0999300 | Msa1096210 | 0.824547 | 7.607664e-54 | -8.615850e-47 |
| Msa0999300 | Msa1123880 | 0.822071 | 2.881491e-53 | -8.615850e-47 |
| Msa0999300 | Msa1125810 | 0.820676 | 6.047659e-53 | -8.615850e-47 |
| Msa0999300 | Msa1127140 | 0.851823 | 6.905647e-61 | -8.615850e-47 |
| Msa0999300 | Msa1129950 | 0.842099 | 3.180491e-58 | -8.615850e-47 |
| Msa0999300 | Msa1129960 | 0.867909 | 9.668231e-66 | -8.615850e-47 |
| Msa0999300 | Msa1129970 | 0.860014 | 2.774334e-63 | -8.615850e-47 |
| Msa0999300 | Msa1130010 | 0.862328 | 5.476244e-64 | -8.615850e-47 |
| Msa0999300 | Msa1135380 | 0.811789 | 5.873668e-51 | -8.615850e-47 |
| Msa0999300 | Msa1145020 | 0.868626 | 5.677182e-66 | -8.615850e-47 |
| Msa0999300 | Msa1166400 | 0.841862 | 3.673319e-58 | -8.615850e-47 |
| Msa0999300 | Msa1169710 | 0.807564 | 4.753261e-50 | -8.615850e-47 |
| Msa0999300 | Msa1169990 | 0.822054 | 2.909006e-53 | -8.615850e-47 |
| Msa0999300 | Msa1171310 | 0.815350 | 9.672618e-52 | -8.615850e-47 |
| Msa0999300 | Msa1176160 | 0.835461 | 1.655528e-56 | -8.615850e-47 |
| Msa0999300 | Msa1200440 | 0.809468 | 1.864068e-50 | -8.615850e-47 |
| Msa0999300 | Msa1201110 | 0.843020 | 1.811627e-58 | -8.615850e-47 |
| Msa0999300 | Msa1201160 | 0.874861 | 4.849296e-68 | -8.615850e-47 |
| Msa0999300 | Msa1228190 | 0.879813 | 9.167380e-70 | -8.615850e-47 |
| Msa0999300 | Msa1228610 | 0.825915 | 3.613300e-54 | -8.615850e-47 |
| Msa0999300 | Msa1232730 | 0.807903 | 4.026412e-50 | -8.615850e-47 |
| Msa0999300 | Msa1233560 | 0.806332 | 8.661179e-50 | -8.615850e-47 |
| Msa0999300 | Msa1260610 | 0.800952 | 1.131944e-48 | -8.615850e-47 |
| Msa0999300 | Msa1271260 | 0.863257 | 2.832913e-64 | -8.615850e-47 |
| Msa0999300 | Msa1277400 | 0.812565 | 3.977262e-51 | -8.615850e-47 |
| Msa0999300 | Msa1285900 | 0.808820 | 2.566659e-50 | -8.615850e-47 |
| Msa0999300 | Msa1294290 | 0.867490 | 1.317372e-65 | -8.615850e-47 |
| Msa0999300 | Msa1305310 | 0.824854 | 6.442487e-54 | -8.615850e-47 |
| Msa0999300 | Msa1305510 | 0.877657 | 5.269090e-69 | -8.615850e-47 |
| Msa0999300 | Msa1307150 | 0.825757 | 3.939327e-54 | -8.615850e-47 |
| Msa0999300 | Msa1307190 | 0.847167 | 1.372389e-59 | -8.615850e-47 |
| Msa0999300 | Msa1326630 | 0.806061 | 9.877945e-50 | -8.615850e-47 |
| Msa0999300 | Msa1336620 | 0.827819 | 1.267428e-54 | -8.615850e-47 |
| Msa0999300 | Msa1336780 | 0.836640 | 8.314259e-57 | -8.615850e-47 |
| Msa0999300 | Msa1339580 | 0.835248 | 1.874138e-56 | -8.615850e-47 |
| Msa0999300 | Msa1356990 | 0.845999 | 2.859446e-59 | -8.615850e-47 |
| Msa0999300 | Msa1374550 | 0.816173 | 6.339850e-52 | -8.615850e-47 |
| Msa0999300 | Msa1378870 | 0.808679 | 2.750652e-50 | -8.615850e-47 |
| Msa0999300 | Msa1379970 | 0.876267 | 1.599025e-68 | -8.615850e-47 |
| Msa0999300 | Msa1389050 | 0.814536 | 1.465662e-51 | -8.615850e-47 |
| Msa0999300 | Msa1394890 | 0.864740 | 9.780143e-65 | -8.615850e-47 |
| Msa0999300 | Msa1406780 | 0.874136 | 8.549842e-68 | -8.615850e-47 |
| Msa0999300 | Msa1408870 | 0.800334 | 1.513201e-48 | -8.615850e-47 |
| Msa0999300 | Msa1414930 | 0.809286 | 2.039644e-50 | -8.615850e-47 |
| Msa0999300 | Msa1419490 | 0.805300 | 1.426747e-49 | -8.615850e-47 |
| Msa0999300 | Msa1420060 | 0.872325 | 3.469479e-67 | -8.615850e-47 |
| Msa0999300 | Msa1421550 | 0.911884 | 3.665790e-83 | -8.615850e-47 |
| Msa0999300 | Msa1423460 | 0.855240 | 7.203456e-62 | -8.615850e-47 |
| Msa0999300 | Msa1431850 | 0.881635 | 2.037421e-70 | -8.615850e-47 |
| Msa0999300 | Msa1435480 | 0.828572 | 8.343315e-55 | -8.615850e-47 |
| Msa0999300 | Msa1437710 | 0.816445 | 5.510063e-52 | -8.615850e-47 |
| Msa0999300 | Msa1449940 | 0.827392 | 1.604275e-54 | -8.615850e-47 |
| Msa0999300 | Msa1455320 | 0.851128 | 1.085427e-60 | -8.615850e-47 |
| Msa0999300 | Msa1458910 | 0.804430 | 2.168881e-49 | -8.615850e-47 |
| Msa0999300 | Msa1459530 | 0.851633 | 7.816155e-61 | -8.615850e-47 |
| Msa0999300 | Msa1461060 | 0.844209 | 8.711256e-59 | -8.615850e-47 |
| Msa0999300 | Msa1462530 | 0.801364 | 9.321915e-49 | -8.615850e-47 |
| Msa0239030 | Msa0999300 | 0.813638 | 2.313137e-51 | -8.615850e-47 |
| Msa0252630 | Msa0999300 | 0.813950 | 1.974971e-51 | -8.615850e-47 |
| Msa0252770 | Msa0999300 | 0.872133 | 4.017769e-67 | -8.615850e-47 |
| Msa0276080 | Msa0999300 | 0.807704 | 4.437799e-50 | -8.615850e-47 |
| Msa0289920 | Msa0999300 | 0.858744 | 6.674698e-63 | -8.615850e-47 |
| Msa0291330 | Msa0999300 | 0.800082 | 1.703031e-48 | -8.615850e-47 |
| Msa0298240 | Msa0999300 | 0.868625 | 5.683045e-66 | -8.615850e-47 |
| Msa0306120 | Msa0999300 | 0.868673 | 5.483310e-66 | -8.615850e-47 |
| Msa0314630 | Msa0999300 | 0.817393 | 3.375020e-52 | -8.615850e-47 |
| Msa0316680 | Msa0999300 | 0.806450 | 8.177860e-50 | -8.615850e-47 |
| Msa0322840 | Msa0999300 | 0.810713 | 1.005368e-50 | -8.615850e-47 |
| Msa0322860 | Msa0999300 | 0.837669 | 4.535081e-57 | -8.615850e-47 |
| Msa0329620 | Msa0999300 | 0.892644 | 1.312383e-74 | -8.615850e-47 |
| Msa0334700 | Msa0999300 | 0.802366 | 5.805429e-49 | -8.615850e-47 |
| Msa0340480 | Msa0999300 | 0.801602 | 8.332647e-49 | -8.615850e-47 |
| Msa0343660 | Msa0999300 | 0.827774 | 1.299093e-54 | -8.615850e-47 |
| Msa0344570 | Msa0999300 | 0.821824 | 3.286905e-53 | -8.615850e-47 |
| Msa0351770 | Msa0999300 | 0.862845 | 3.797819e-64 | -8.615850e-47 |
| Msa0359250 | Msa0999300 | 0.925724 | 1.244914e-90 | -8.615850e-47 |
| Msa0487570 | Msa0999300 | 0.846271 | 2.412481e-59 | -8.615850e-47 |
| Msa0487630 | Msa0999300 | 0.841861 | 3.675998e-58 | -8.615850e-47 |
| Msa0492190 | Msa0999300 | 0.898258 | 6.324929e-77 | -8.615850e-47 |
| Msa0515950 | Msa0999300 | 0.845224 | 4.641467e-59 | -8.615850e-47 |
| Msa0534930 | Msa0999300 | 0.859546 | 3.837934e-63 | -8.615850e-47 |
| Msa0535040 | Msa0999300 | 0.850791 | 1.350923e-60 | -8.615850e-47 |
| Msa0537920 | Msa0999300 | 0.831730 | 1.414116e-55 | -8.615850e-47 |
| Msa0538220 | Msa0999300 | 0.826998 | 1.994278e-54 | -8.615850e-47 |
| Msa0575740 | Msa0999300 | 0.856586 | 2.910786e-62 | -8.615850e-47 |
| Msa0591790 | Msa0999300 | 0.884915 | 1.274941e-71 | -8.615850e-47 |
| Msa0594090 | Msa0999300 | 0.880408 | 5.628026e-70 | -8.615850e-47 |
| Msa0844560 | Msa0999300 | 0.804150 | 2.480638e-49 | -8.615850e-47 |
| Msa0845940 | Msa0999300 | 0.811368 | 7.248634e-51 | -8.615850e-47 |
| Msa0849280 | Msa0999300 | 0.840018 | 1.119497e-57 | -8.615850e-47 |
| Msa0851020 | Msa0999300 | 0.835526 | 1.594563e-56 | -8.615850e-47 |
| Msa0856520 | Msa0999300 | 0.810995 | 8.732679e-51 | -8.615850e-47 |
| Msa0860170 | Msa0999300 | 0.811452 | 6.950699e-51 | -8.615850e-47 |
| Msa0860280 | Msa0999300 | 0.864232 | 1.409918e-64 | -8.615850e-47 |
| Msa0867350 | Msa0999300 | 0.876848 | 1.007076e-68 | -8.615850e-47 |
| Msa0885060 | Msa0999300 | 0.847845 | 8.937596e-60 | -8.615850e-47 |
| Msa0896350 | Msa0999300 | 0.826163 | 3.154531e-54 | -8.615850e-47 |
| Msa0898730 | Msa0999300 | 0.884885 | 1.308564e-71 | -8.615850e-47 |
| Msa0899950 | Msa0999300 | 0.804970 | 1.673053e-49 | -8.615850e-47 |
| Msa0922750 | Msa0999300 | 0.836889 | 7.180068e-57 | -8.615850e-47 |
| Msa0927120 | Msa0999300 | 0.820810 | 5.634892e-53 | -8.615850e-47 |
| Msa0929870 | Msa0999300 | 0.895328 | 1.063905e-75 | -8.615850e-47 |
| Msa0936410 | Msa0999300 | 0.849780 | 2.595676e-60 | -8.615850e-47 |
| Msa0941820 | Msa0999300 | 0.808037 | 3.770302e-50 | -8.615850e-47 |
| Msa0944760 | Msa0999300 | 0.849661 | 2.801968e-60 | -8.615850e-47 |
| Msa0944880 | Msa0999300 | 0.833477 | 5.216137e-56 | -8.615850e-47 |
| Msa0961560 | Msa0999300 | 0.839719 | 1.339272e-57 | -8.615850e-47 |
| Msa0964840 | Msa0999300 | 0.813571 | 2.392876e-51 | -8.615850e-47 |
| Msa0965310 | Msa0999300 | 0.827286 | 1.701195e-54 | -8.615850e-47 |
| Msa0973250 | Msa0999300 | 0.865594 | 5.272604e-65 | -8.615850e-47 |
| Msa0979510 | Msa0999300 | 0.826095 | 3.274114e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0999300 | MtrunA17_Chr6g0485481 | 53.061 | 49 | 22 | 1 | 3 | 50 | 18 | 66 | 6.63e-12 | 55.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 26 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGATGAAAACATTGATTAT+TGG | 0.176776 | 6_4:+81211565 | Msa0999300:CDS |
| CATGGGTGGAATTGGAAAAT+AGG | 0.301614 | 6_4:+81210324 | Msa0999300:five_prime_UTR |
| TCAATTGAGATGGTTATGTT+AGG | 0.316257 | 6_4:-81209963 | None:intergenic |
| GCCTTTGGCATGGGTGGAAT+TGG | 0.327672 | 6_4:+81210316 | Msa0999300:five_prime_UTR |
| CAATTGAGATGGTTATGTTA+GGG | 0.394866 | 6_4:-81209962 | None:intergenic |
| CTGAAGTGTGGAGCTGCCTT+TGG | 0.398857 | 6_4:+81210301 | Msa0999300:five_prime_UTR |
| ACCTACACTCAACACATATT+CGG | 0.429644 | 6_4:+81211500 | Msa0999300:five_prime_UTR |
| AGAAAAGGAGTGTTTGTTGT+TGG | 0.434642 | 6_4:-81209933 | None:intergenic |
| AGTATCACCTGACTTTGATA+TGG | 0.441071 | 6_4:-81211664 | None:intergenic |
| GTGTGGAGCTGCCTTTGGCA+TGG | 0.496523 | 6_4:+81210306 | Msa0999300:five_prime_UTR |
| GGAAGAACAACACTCAAAGC+TGG | 0.500377 | 6_4:-81209912 | None:intergenic |
| TGTGGAGCTGCCTTTGGCAT+GGG | 0.502829 | 6_4:+81210307 | Msa0999300:five_prime_UTR |
| TTAATTACCATATCAAAGTC+AGG | 0.511911 | 6_4:+81211657 | Msa0999300:CDS |
| ATGTTAGGGGTGAAAAGAAA+AGG | 0.530276 | 6_4:-81209948 | None:intergenic |
| GGAGCTGCCTTTGGCATGGG+TGG | 0.538586 | 6_4:+81210310 | Msa0999300:five_prime_UTR |
| AATTGAGATGGTTATGTTAG+GGG | 0.567185 | 6_4:-81209961 | None:intergenic |
| CAGCGTGAGGTTCATGCACA+TGG | 0.567686 | 6_4:-81210281 | None:intergenic |
| TCCAATTCCACCCATGCCAA+AGG | 0.578726 | 6_4:-81210317 | None:intergenic |
| GAAGAACAACACTCAAAGCT+GGG | 0.590836 | 6_4:-81209911 | None:intergenic |
| CCAGCATCAATAAGAAAACC+AGG | 0.591332 | 6_4:-81211609 | None:intergenic |
| TGGCAAGACAGAAACGATGA+AGG | 0.611685 | 6_4:+81211585 | Msa0999300:CDS |
| GACAGAAACGATGAAGGACC+TGG | 0.614083 | 6_4:+81211591 | Msa0999300:CDS |
| TCCGAATATGTGTTGAGTGT+AGG | 0.619739 | 6_4:-81211501 | None:intergenic |
| CAGCTCCACACTTCAGCGTG+AGG | 0.630034 | 6_4:-81210294 | None:intergenic |
| ACACTCAACACATATTCGGA+TGG | 0.639597 | 6_4:+81211504 | Msa0999300:five_prime_UTR |
| ATGAACCTCACGCTGAAGTG+TGG | 0.657677 | 6_4:+81210289 | Msa0999300:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATAGTTAATAATTTGTA+AGG | - | chr6_4:81211214-81211233 | None:intergenic | 10.0% |
| !! | TTACAAATAAAATAGAAAAA+TGG | - | chr6_4:81211390-81211409 | None:intergenic | 10.0% |
| !!! | TGTATTTTATCAAGAAATTA+AGG | + | chr6_4:81210041-81210060 | Msa0999300:five_prime_UTR | 15.0% |
| !! | AAAATACATCTAAGAATATA+TGG | - | chr6_4:81210083-81210102 | None:intergenic | 15.0% |
| !! | ATGATATGCAATAAAATAAA+TGG | - | chr6_4:81211306-81211325 | None:intergenic | 15.0% |
| !! | ACATGAAAATTATCAAAAAA+AGG | + | chr6_4:81211707-81211726 | Msa0999300:intron | 15.0% |
| !! | CATGAAAATTATCAAAAAAA+GGG | + | chr6_4:81211708-81211727 | Msa0999300:intron | 15.0% |
| !!! | TTTTCTTGTTTATTTTTGTT+TGG | + | chr6_4:81212466-81212485 | Msa0999300:CDS | 15.0% |
| !!! | GTTTTTAATCACTATGTATT+TGG | - | chr6_4:81210007-81210026 | None:intergenic | 20.0% |
| !!! | AAAATACATGCTTTTTTTCT+TGG | - | chr6_4:81210029-81210048 | None:intergenic | 20.0% |
| !!! | TTATTATTTTGTAGTCCTTT+TGG | + | chr6_4:81210145-81210164 | Msa0999300:intron | 20.0% |
| !!! | ATGCTTTTAATTTTAAACGT+GGG | - | chr6_4:81210188-81210207 | None:intergenic | 20.0% |
| !!! | TATGCTTTTAATTTTAAACG+TGG | - | chr6_4:81210189-81210208 | None:intergenic | 20.0% |
| !! | ATATTTGTTTATGTTGTGTT+TGG | + | chr6_4:81210785-81210804 | Msa0999300:intron | 20.0% |
| !!! | TAAGTTTTCGAAATTATAAG+TGG | + | chr6_4:81210808-81210827 | Msa0999300:intron | 20.0% |
| !! | CTAAAAATGATAATATCATG+AGG | - | chr6_4:81210946-81210965 | None:intergenic | 20.0% |
| !! | CCTCAAATATGAATTATATT+AGG | - | chr6_4:81211088-81211107 | None:intergenic | 20.0% |
| !! | CCTAATATAATTCATATTTG+AGG | + | chr6_4:81211085-81211104 | Msa0999300:intron | 20.0% |
| !! | ATATGCAATAAAATAAATGG+CGG | - | chr6_4:81211303-81211322 | None:intergenic | 20.0% |
| !!! | AAGATGAAAACATTGATTAT+TGG | + | chr6_4:81211565-81211584 | Msa0999300:CDS | 20.0% |
| !!! | TTAAAAAGTGTTAGACTAAA+TGG | + | chr6_4:81211883-81211902 | Msa0999300:intron | 20.0% |
| !! | CATGATTATCATACATTATT+CGG | - | chr6_4:81212116-81212135 | None:intergenic | 20.0% |
| !!! | AAAATAGAATATTTTGTCTC+AGG | - | chr6_4:81212175-81212194 | None:intergenic | 20.0% |
| !! | TTTTAAACGTGGGAAAAAAA+TGG | - | chr6_4:81210178-81210197 | None:intergenic | 25.0% |
| ! | ATTAACTAATAAAAAAGGGC+TGG | - | chr6_4:81210446-81210465 | None:intergenic | 25.0% |
| !!! | TTTTTAAGTAAAAAAAGGGC+TGG | - | chr6_4:81210496-81210515 | None:intergenic | 25.0% |
| ! | ATGATAGAAACATAACACAA+TGG | - | chr6_4:81210710-81210729 | None:intergenic | 25.0% |
| !!! | GCGGTTTGTTAAAATAATTA+AGG | - | chr6_4:81210735-81210754 | None:intergenic | 25.0% |
| ! | CCAATAAAAAATGTTACTAC+CGG | + | chr6_4:81210849-81210868 | Msa0999300:intron | 25.0% |
| ! | CAATAAAAAATGTTACTACC+GGG | + | chr6_4:81210850-81210869 | Msa0999300:intron | 25.0% |
| !!! | TTATTGATAGTGAAAATCGT+AGG | + | chr6_4:81210984-81211003 | Msa0999300:intron | 25.0% |
| ! | TTAATTACCATATCAAAGTC+AGG | + | chr6_4:81211657-81211676 | Msa0999300:CDS | 25.0% |
| !!! | ACTTTACTTTTTTACTTCAG+TGG | + | chr6_4:81211684-81211703 | Msa0999300:intron | 25.0% |
| !! | ACCAATGAAACTCTTTTATA+CGG | + | chr6_4:81211749-81211768 | Msa0999300:intron | 25.0% |
| ! | TTCATGATTGATGCTTATTT+CGG | + | chr6_4:81211926-81211945 | Msa0999300:intron | 25.0% |
| ! | CGAATAATGTATGATAATCA+TGG | + | chr6_4:81212114-81212133 | Msa0999300:intron | 25.0% |
| AATTGAGATGGTTATGTTAG+GGG | - | chr6_4:81209964-81209983 | None:intergenic | 30.0% | |
| CAATTGAGATGGTTATGTTA+GGG | - | chr6_4:81209965-81209984 | None:intergenic | 30.0% | |
| TCAATTGAGATGGTTATGTT+AGG | - | chr6_4:81209966-81209985 | None:intergenic | 30.0% | |
| ! | GAGAAAGTTTTCAATTGAGA+TGG | - | chr6_4:81209976-81209995 | None:intergenic | 30.0% |
| CAACAAGACAAATCATGTTT+AGG | - | chr6_4:81210248-81210267 | None:intergenic | 30.0% | |
| ! | CTAAACATGATTTGTCTTGT+TGG | + | chr6_4:81210246-81210265 | Msa0999300:intron | 30.0% |
| AAACATAAGATGATGAAGAG+AGG | + | chr6_4:81210573-81210592 | Msa0999300:intron | 30.0% | |
| !!! | CCGGTAGTAACATTTTTTAT+TGG | - | chr6_4:81210852-81210871 | None:intergenic | 30.0% |
| ACTATTAAAGATCTCTCTGT+AGG | - | chr6_4:81211462-81211481 | None:intergenic | 30.0% | |
| ACCGTATAAAAGAGTTTCAT+TGG | - | chr6_4:81211753-81211772 | None:intergenic | 30.0% | |
| AATTCATCATGCGTTATTTG+AGG | - | chr6_4:81212081-81212100 | None:intergenic | 30.0% | |
| ATAGAATCGAATTAAGAGAG+TGG | + | chr6_4:81212201-81212220 | Msa0999300:intron | 30.0% | |
| TAGAATCGAATTAAGAGAGT+GGG | + | chr6_4:81212202-81212221 | Msa0999300:intron | 30.0% | |
| ATAATATCATGTAGCGCTAA+AGG | + | chr6_4:81212324-81212343 | Msa0999300:intron | 30.0% | |
| TGGTGAATTTCATTCATCAA+TGG | + | chr6_4:81212386-81212405 | Msa0999300:intron | 30.0% | |
| ! | TTTGTTTGGTCTGTTTTATG+TGG | + | chr6_4:81212480-81212499 | Msa0999300:CDS | 30.0% |
| !! | AGAAAAGGAGTGTTTGTTGT+TGG | - | chr6_4:81209936-81209955 | None:intergenic | 35.0% |
| ATGTTAGGGGTGAAAAGAAA+AGG | - | chr6_4:81209951-81209970 | None:intergenic | 35.0% | |
| AAAAATGGAAAGGGACCAAA+AGG | - | chr6_4:81210163-81210182 | None:intergenic | 35.0% | |
| ACGTGGGAAAAAAATGGAAA+GGG | - | chr6_4:81210172-81210191 | None:intergenic | 35.0% | |
| AACGTGGGAAAAAAATGGAA+AGG | - | chr6_4:81210173-81210192 | None:intergenic | 35.0% | |
| ACACATCCGACAAATCTATA+CGG | - | chr6_4:81210664-81210683 | None:intergenic | 35.0% | |
| ATACACAACTATTGTGAGAG+TGG | - | chr6_4:81210757-81210776 | None:intergenic | 35.0% | |
| ATTCATTACCTAGAAGAACC+CGG | - | chr6_4:81210871-81210890 | None:intergenic | 35.0% | |
| ACCTACACTCAACACATATT+CGG | + | chr6_4:81211500-81211519 | Msa0999300:five_prime_UTR | 35.0% | |
| AGTATCACCTGACTTTGATA+TGG | - | chr6_4:81211667-81211686 | None:intergenic | 35.0% | |
| ! | GAGTTTCATTGGTTGCAATA+AGG | - | chr6_4:81211742-81211761 | None:intergenic | 35.0% |
| TATTAGCATGAGATGTGTTG+AGG | - | chr6_4:81211781-81211800 | None:intergenic | 35.0% | |
| TATTTGTGACTCTCGATGTA+TGG | + | chr6_4:81211812-81211831 | Msa0999300:intron | 35.0% | |
| !! | AATTTGTTACGTGACTTTGC+AGG | + | chr6_4:81211851-81211870 | Msa0999300:intron | 35.0% |
| ATGATTGATGCTTATTTCGG+AGG | + | chr6_4:81211929-81211948 | Msa0999300:intron | 35.0% | |
| TGATTGATGCTTATTTCGGA+GGG | + | chr6_4:81211930-81211949 | Msa0999300:intron | 35.0% | |
| ATGTGAACAACACAACTTTG+TGG | - | chr6_4:81211975-81211994 | None:intergenic | 35.0% | |
| AATTGTCTCTTCATCCTCTT+TGG | - | chr6_4:81212001-81212020 | None:intergenic | 35.0% | |
| AAAGAGGATGAAGAGACAAT+TGG | + | chr6_4:81212000-81212019 | Msa0999300:intron | 35.0% | |
| AGAGACAATTGGAAGTTCTT+TGG | + | chr6_4:81212011-81212030 | Msa0999300:intron | 35.0% | |
| GAGACAATTGGAAGTTCTTT+GGG | + | chr6_4:81212012-81212031 | Msa0999300:intron | 35.0% | |
| AACACAATCAACAAACGCAT+TGG | - | chr6_4:81212049-81212068 | None:intergenic | 35.0% | |
| CATAAAAGTCAGGTAGTGAT+TGG | - | chr6_4:81212147-81212166 | None:intergenic | 35.0% | |
| ! | AGAATATTTTGTCTCAGGAG+TGG | - | chr6_4:81212170-81212189 | None:intergenic | 35.0% |
| ! | TATGCATCTAGCTTCTTCAT+TGG | - | chr6_4:81212246-81212265 | None:intergenic | 35.0% |
| AATTCACCAAGAAGAGTAGA+AGG | - | chr6_4:81212375-81212394 | None:intergenic | 35.0% | |
| CATGGGTGGAATTGGAAAAT+AGG | + | chr6_4:81210324-81210343 | Msa0999300:five_prime_UTR | 40.0% | |
| ! | TGAGTTGAATCTACTCACCA+CGG | + | chr6_4:81210618-81210637 | Msa0999300:intron | 40.0% |
| TCGATGCCGTATAGATTTGT+CGG | + | chr6_4:81210655-81210674 | Msa0999300:intron | 40.0% | |
| TCCGAATATGTGTTGAGTGT+AGG | - | chr6_4:81211504-81211523 | None:intergenic | 40.0% | |
| ACACTCAACACATATTCGGA+TGG | + | chr6_4:81211504-81211523 | Msa0999300:five_prime_UTR | 40.0% | |
| CCAGCATCAATAAGAAAACC+AGG | - | chr6_4:81211612-81211631 | None:intergenic | 40.0% | |
| !! | CCTGGTTTTCTTATTGATGC+TGG | + | chr6_4:81211609-81211628 | Msa0999300:CDS | 40.0% |
| GTGTTAGACTAAATGGCTGA+CGG | + | chr6_4:81211890-81211909 | Msa0999300:intron | 40.0% | |
| GATTGATGCTTATTTCGGAG+GGG | + | chr6_4:81211931-81211950 | Msa0999300:intron | 40.0% | |
| ATTGATGCTTATTTCGGAGG+GGG | + | chr6_4:81211932-81211951 | Msa0999300:intron | 40.0% | |
| GAACAACACAACTTTGTGGT+GGG | - | chr6_4:81211971-81211990 | None:intergenic | 40.0% | |
| TGAACAACACAACTTTGTGG+TGG | - | chr6_4:81211972-81211991 | None:intergenic | 40.0% | |
| GTTGTTCACATCTTCCAAAG+AGG | + | chr6_4:81211984-81212003 | Msa0999300:intron | 40.0% | |
| ! | CTGTTTCTCTTAGAGATGCT+AGG | + | chr6_4:81212274-81212293 | Msa0999300:intron | 40.0% |
| CTTAGAGATGCTAGGTCTTT+AGG | + | chr6_4:81212282-81212301 | Msa0999300:intron | 40.0% | |
| GGTCTTTCTTCTTCATCTTC+TGG | + | chr6_4:81212345-81212364 | Msa0999300:intron | 40.0% | |
| GGAAGAACAACACTCAAAGC+TGG | - | chr6_4:81209915-81209934 | None:intergenic | 45.0% | |
| !! | CTATACGGCATCGATTCTGA+CGG | - | chr6_4:81210649-81210668 | None:intergenic | 45.0% |
| CACAACTATTGTGAGAGTGG+CGG | - | chr6_4:81210754-81210773 | None:intergenic | 45.0% | |
| TGTTACTACCGGGTTCTTCT+AGG | + | chr6_4:81210860-81210879 | Msa0999300:intron | 45.0% | |
| TGGCAAGACAGAAACGATGA+AGG | + | chr6_4:81211585-81211604 | Msa0999300:CDS | 45.0% | |
| TCAGGAGTGGCATAAAAGTC+AGG | - | chr6_4:81212157-81212176 | None:intergenic | 45.0% | |
| GGTTCACCTTCTACTCTTCT+TGG | + | chr6_4:81212366-81212385 | Msa0999300:intron | 45.0% | |
| !! | ATTTATTAACTAATAAAAAA+GGG | - | chr6_4:81210450-81210469 | None:intergenic | 5.0% |
| !! | TATTTATTAACTAATAAAAA+AGG | - | chr6_4:81210451-81210470 | None:intergenic | 5.0% |
| !!! | TTATTTTTTAAGTAAAAAAA+GGG | - | chr6_4:81210500-81210519 | None:intergenic | 5.0% |
| !!! | ATTATTTTTTAAGTAAAAAA+AGG | - | chr6_4:81210501-81210520 | None:intergenic | 5.0% |
| !! | TAAATTATTGTAAAAATAAA+TGG | - | chr6_4:81210898-81210917 | None:intergenic | 5.0% |
| !!! | ATATTTTTTTTTTATCTATA+TGG | - | chr6_4:81211135-81211154 | None:intergenic | 5.0% |
| !! | TAAAAAAAAAATATATTACA+TGG | + | chr6_4:81211141-81211160 | Msa0999300:intron | 5.0% |
| ATGAACCTCACGCTGAAGTG+TGG | + | chr6_4:81210289-81210308 | Msa0999300:five_prime_UTR | 50.0% | |
| TCCAATTCCACCCATGCCAA+AGG | - | chr6_4:81210320-81210339 | None:intergenic | 50.0% | |
| GTTGAATCTACTCACCACGG+CGG | + | chr6_4:81210621-81210640 | Msa0999300:intron | 50.0% | |
| GACAGAAACGATGAAGGACC+TGG | + | chr6_4:81211591-81211610 | Msa0999300:CDS | 50.0% | |
| CAGCGTGAGGTTCATGCACA+TGG | - | chr6_4:81210284-81210303 | None:intergenic | 55.0% | |
| CTGAAGTGTGGAGCTGCCTT+TGG | + | chr6_4:81210301-81210320 | Msa0999300:five_prime_UTR | 55.0% | |
| TGTGGAGCTGCCTTTGGCAT+GGG | + | chr6_4:81210307-81210326 | Msa0999300:five_prime_UTR | 55.0% | |
| GCCTTTGGCATGGGTGGAAT+TGG | + | chr6_4:81210316-81210335 | Msa0999300:five_prime_UTR | 55.0% | |
| CAGCTCCACACTTCAGCGTG+AGG | - | chr6_4:81210297-81210316 | None:intergenic | 60.0% | |
| GTGTGGAGCTGCCTTTGGCA+TGG | + | chr6_4:81210306-81210325 | Msa0999300:five_prime_UTR | 60.0% | |
| GGAGCTGCCTTTGGCATGGG+TGG | + | chr6_4:81210310-81210329 | Msa0999300:five_prime_UTR | 65.0% | |
| CGATTCTGACGGTACCGCCG+TGG | - | chr6_4:81210638-81210657 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 81209912 | 81212506 | 81209912 | ID=Msa0999300;Name=Msa0999300 |
| chr6_4 | mRNA | 81209912 | 81212506 | 81209912 | ID=Msa0999300-mRNA-1;Parent=Msa0999300;Name=Msa0999300-mRNA-1;_AED=0.22;_eAED=0.32;_QI=306|0.33|0.5|1|0|0|4|0|58 |
| chr6_4 | exon | 81209912 | 81210062 | 81209912 | ID=Msa0999300-mRNA-1:exon:15527;Parent=Msa0999300-mRNA-1 |
| chr6_4 | exon | 81210274 | 81210345 | 81210274 | ID=Msa0999300-mRNA-1:exon:15528;Parent=Msa0999300-mRNA-1 |
| chr6_4 | exon | 81211466 | 81211678 | 81211466 | ID=Msa0999300-mRNA-1:exon:15529;Parent=Msa0999300-mRNA-1 |
| chr6_4 | exon | 81212463 | 81212506 | 81212463 | ID=Msa0999300-mRNA-1:exon:15530;Parent=Msa0999300-mRNA-1 |
| chr6_4 | five_prime_UTR | 81209912 | 81210062 | 81209912 | ID=Msa0999300-mRNA-1:five_prime_utr;Parent=Msa0999300-mRNA-1 |
| chr6_4 | five_prime_UTR | 81210274 | 81210345 | 81210274 | ID=Msa0999300-mRNA-1:five_prime_utr;Parent=Msa0999300-mRNA-1 |
| chr6_4 | five_prime_UTR | 81211466 | 81211548 | 81211466 | ID=Msa0999300-mRNA-1:five_prime_utr;Parent=Msa0999300-mRNA-1 |
| chr6_4 | CDS | 81211549 | 81211678 | 81211549 | ID=Msa0999300-mRNA-1:cds;Parent=Msa0999300-mRNA-1 |
| chr6_4 | CDS | 81212463 | 81212506 | 81212463 | ID=Msa0999300-mRNA-1:cds;Parent=Msa0999300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
