Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0975300 | XP_024641978.2 | 91.349 | 682 | 56 | 1 | 1 | 682 | 53 | 731 | 0.0 | 1252 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0975300 | A0A396HGV7 | 91.349 | 682 | 56 | 1 | 1 | 682 | 55 | 733 | 0.0 | 1251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005890 | Msa0975300 | 0.813494 | 2.488383e-51 | -8.615850e-47 |
| Msa0028420 | Msa0975300 | 0.806356 | 8.560879e-50 | -8.615850e-47 |
| Msa0036870 | Msa0975300 | 0.813087 | 3.056560e-51 | -8.615850e-47 |
| Msa0081520 | Msa0975300 | 0.802664 | 5.038749e-49 | -8.615850e-47 |
| Msa0090400 | Msa0975300 | 0.812603 | 3.901042e-51 | -8.615850e-47 |
| Msa0626450 | Msa0975300 | 0.801946 | 7.082454e-49 | -8.615850e-47 |
| Msa0626490 | Msa0975300 | 0.805941 | 1.046748e-49 | -8.615850e-47 |
| Msa0741240 | Msa0975300 | 0.808625 | 2.824556e-50 | -8.615850e-47 |
| Msa0768990 | Msa0975300 | 0.802969 | 4.358752e-49 | -8.615850e-47 |
| Msa0137880 | Msa0975300 | 0.823836 | 1.117607e-53 | -8.615850e-47 |
| Msa0146040 | Msa0975300 | 0.805268 | 1.448725e-49 | -8.615850e-47 |
| Msa0182240 | Msa0975300 | 0.802980 | 4.337253e-49 | -8.615850e-47 |
| Msa0371030 | Msa0975300 | 0.806617 | 7.539612e-50 | -8.615850e-47 |
| Msa0467490 | Msa0975300 | 0.803957 | 2.720059e-49 | -8.615850e-47 |
| Msa0475790 | Msa0975300 | 0.804786 | 1.827903e-49 | -8.615850e-47 |
| Msa0255090 | Msa0975300 | 0.810358 | 1.199252e-50 | -8.615850e-47 |
| Msa0259380 | Msa0975300 | 0.812501 | 4.107242e-51 | -8.615850e-47 |
| Msa0267110 | Msa0975300 | 0.815562 | 8.676277e-52 | -8.615850e-47 |
| Msa0292400 | Msa0975300 | 0.816363 | 5.747708e-52 | -8.615850e-47 |
| Msa0337700 | Msa0975300 | 0.802923 | 4.455999e-49 | -8.615850e-47 |
| Msa0532070 | Msa0975300 | 0.808342 | 3.247074e-50 | -8.615850e-47 |
| Msa0569200 | Msa0975300 | 0.819797 | 9.618782e-53 | -8.615850e-47 |
| Msa0861870 | Msa0975300 | 0.808835 | 2.547891e-50 | -8.615850e-47 |
| Msa0872830 | Msa0975300 | 0.833489 | 5.180005e-56 | -8.615850e-47 |
| Msa0906130 | Msa0975300 | 0.816032 | 6.814631e-52 | -8.615850e-47 |
| Msa0938120 | Msa0975300 | 0.871941 | 4.656464e-67 | -8.615850e-47 |
| Msa0945110 | Msa0975300 | 0.839260 | 1.762041e-57 | -8.615850e-47 |
| Msa0975300 | Msa1045140 | 0.824447 | 8.033384e-54 | -8.615850e-47 |
| Msa0975300 | Msa1103990 | 0.820064 | 8.355044e-53 | -8.615850e-47 |
| Msa0975300 | Msa1113340 | 0.809337 | 1.988759e-50 | -8.615850e-47 |
| Msa0975300 | Msa1157870 | 0.800304 | 1.534601e-48 | -8.615850e-47 |
| Msa0975300 | Msa1196440 | 0.803132 | 4.034256e-49 | -8.615850e-47 |
| Msa0975300 | Msa1209460 | 0.800544 | 1.371494e-48 | -8.615850e-47 |
| Msa0975300 | Msa1269480 | 0.816402 | 5.634686e-52 | -8.615850e-47 |
| Msa0975300 | Msa1321340 | 0.803040 | 4.214368e-49 | -8.615850e-47 |
| Msa0975300 | Msa1391770 | 0.820582 | 6.357975e-53 | -8.615850e-47 |
| Msa0975300 | Msa1396030 | 0.801743 | 7.797540e-49 | -8.615850e-47 |
| Msa0975300 | Msa1454140 | 0.819692 | 1.016330e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0975300 | MtrunA17_Chr6g0454041 | 91.349 | 682 | 56 | 1 | 1 | 682 | 55 | 733 | 0.0 | 1251 |
| Msa0975300 | MtrunA17_Chr6g0454051 | 64.047 | 687 | 222 | 7 | 1 | 678 | 9 | 679 | 0.0 | 857 |
| Msa0975300 | MtrunA17_Chr6g0454061 | 61.741 | 609 | 222 | 6 | 59 | 657 | 2 | 609 | 0.0 | 729 |
| Msa0975300 | MtrunA17_Chr6g0455641 | 60.656 | 610 | 220 | 8 | 59 | 657 | 7 | 607 | 0.0 | 693 |
| Msa0975300 | MtrunA17_Chr2g0302451 | 30.200 | 649 | 378 | 11 | 31 | 610 | 149 | 791 | 1.75e-85 | 287 |
| Msa0975300 | MtrunA17_Chr3g0126261 | 28.810 | 538 | 362 | 11 | 126 | 650 | 17 | 546 | 7.77e-67 | 230 |
| Msa0975300 | MtrunA17_Chr3g0112101 | 31.041 | 509 | 332 | 8 | 131 | 627 | 203 | 704 | 6.99e-65 | 229 |
| Msa0975300 | MtrunA17_Chr6g0476101 | 36.434 | 258 | 158 | 2 | 235 | 489 | 7 | 261 | 1.66e-44 | 161 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0975300 | AT3G17450.2 | 31.238 | 509 | 334 | 7 | 112 | 612 | 291 | 791 | 3.60e-81 | 276 |
| Msa0975300 | AT3G17450.1 | 31.238 | 509 | 334 | 7 | 112 | 612 | 291 | 791 | 3.60e-81 | 276 |
| Msa0975300 | AT4G15020.2 | 32.394 | 497 | 324 | 7 | 131 | 621 | 197 | 687 | 1.17e-77 | 264 |
| Msa0975300 | AT4G15020.1 | 32.394 | 497 | 324 | 7 | 131 | 621 | 197 | 687 | 1.17e-77 | 264 |
| Msa0975300 | AT3G22220.3 | 31.546 | 485 | 316 | 8 | 131 | 608 | 193 | 668 | 3.89e-73 | 251 |
| Msa0975300 | AT3G22220.4 | 31.546 | 485 | 316 | 8 | 131 | 608 | 193 | 668 | 3.89e-73 | 251 |
| Msa0975300 | AT3G22220.2 | 31.546 | 485 | 316 | 8 | 131 | 608 | 193 | 668 | 3.89e-73 | 251 |
| Msa0975300 | AT3G22220.1 | 31.546 | 485 | 316 | 8 | 131 | 608 | 193 | 668 | 3.89e-73 | 251 |
| Msa0975300 | AT1G79740.1 | 27.563 | 595 | 399 | 11 | 24 | 609 | 14 | 585 | 4.44e-65 | 227 |
| Msa0975300 | AT1G79740.4 | 27.563 | 595 | 399 | 11 | 24 | 609 | 14 | 585 | 4.44e-65 | 227 |
| Msa0975300 | AT1G79740.3 | 28.942 | 463 | 311 | 7 | 154 | 609 | 1 | 452 | 2.28e-56 | 200 |
| Msa0975300 | AT1G79740.2 | 28.942 | 463 | 311 | 7 | 154 | 609 | 1 | 452 | 2.28e-56 | 200 |
| Msa0975300 | AT3G13020.1 | 27.731 | 595 | 367 | 16 | 14 | 578 | 8 | 569 | 1.11e-55 | 200 |
| Msa0975300 | AT5G33406.1 | 36.458 | 288 | 170 | 5 | 332 | 611 | 1 | 283 | 1.72e-48 | 178 |
| Msa0975300 | AT3G13030.3 | 25.974 | 539 | 364 | 13 | 89 | 612 | 14 | 532 | 1.62e-47 | 176 |
| Msa0975300 | AT3G13030.4 | 25.974 | 539 | 364 | 13 | 89 | 612 | 14 | 532 | 1.62e-47 | 176 |
| Msa0975300 | AT3G13030.1 | 25.974 | 539 | 364 | 13 | 89 | 612 | 14 | 532 | 1.62e-47 | 176 |
| Msa0975300 | AT3G13030.2 | 25.974 | 539 | 364 | 13 | 89 | 612 | 14 | 532 | 1.62e-47 | 176 |
| Msa0975300 | AT3G13010.1 | 26.531 | 490 | 311 | 13 | 109 | 579 | 73 | 532 | 5.73e-40 | 155 |
| Msa0975300 | AT3G13030.5 | 24.861 | 539 | 337 | 14 | 89 | 612 | 14 | 499 | 9.88e-40 | 153 |
| Msa0975300 | AT1G43260.1 | 28.448 | 232 | 165 | 1 | 132 | 362 | 39 | 270 | 1.03e-30 | 122 |
| Msa0975300 | AT1G36095.1 | 32.515 | 163 | 110 | 0 | 238 | 400 | 135 | 297 | 5.96e-22 | 97.4 |
| Msa0975300 | AT5G31412.1 | 36.667 | 120 | 74 | 1 | 188 | 307 | 123 | 240 | 6.04e-18 | 87.4 |
Find 155 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACAAAAGGGATATATATT+TGG | 0.170630 | 6_4:+9046228 | Msa0975300:CDS |
| TGCTTGACAGGCAGTTCTTA+TGG | 0.234168 | 6_4:+9047031 | Msa0975300:CDS |
| CCACCGAGTTTCTTTGATAT+TGG | 0.236160 | 6_4:+9045720 | Msa0975300:CDS |
| CGATTTGCATGTCACTTAAC+TGG | 0.262528 | 6_4:+9045357 | Msa0975300:CDS |
| TTCTCTTTCTTTGTCATCTT+CGG | 0.294307 | 6_4:-9046561 | None:intergenic |
| AAGATGGTGTTGGGAGGAAT+AGG | 0.307959 | 6_4:+9045511 | Msa0975300:CDS |
| AGACACGAATTGCGAAATTC+TGG | 0.317559 | 6_4:-9047006 | None:intergenic |
| GGGATATATATTTGGAAAGT+TGG | 0.318712 | 6_4:+9046236 | Msa0975300:CDS |
| AGATGGAGATGAAAATTAAA+TGG | 0.324022 | 6_4:+9047450 | Msa0975300:exon |
| GCTTGACAGGCAGTTCTTAT+GGG | 0.335207 | 6_4:+9047032 | Msa0975300:CDS |
| GCGAAAGATGCCCACCAAAT+TGG | 0.338113 | 6_4:-9046965 | None:intergenic |
| TCAATCCTAGATCTTTCTTC+AGG | 0.346866 | 6_4:-9046860 | None:intergenic |
| AATGTTATGATTTGTTATAA+AGG | 0.347513 | 6_4:+9046425 | Msa0975300:CDS |
| TTCGTCAACTTAATATCTTC+CGG | 0.365017 | 6_4:-9045756 | None:intergenic |
| TAAGTTGACGAATGAAGTTT+TGG | 0.365868 | 6_4:+9045767 | Msa0975300:CDS |
| GTGAGGAGACTCCACCAATT+TGG | 0.368292 | 6_4:+9046951 | Msa0975300:CDS |
| AACCATGGGTTTCATTTATG+AGG | 0.373668 | 6_4:+9046499 | Msa0975300:CDS |
| CAAGTTTAGTATGTTCCTCT+TGG | 0.377450 | 6_4:-9045856 | None:intergenic |
| CCAGCAGTAATTACGGCTAT+TGG | 0.383693 | 6_4:-9046929 | None:intergenic |
| ATAAGTGTCGCTTTGTGAAT+AGG | 0.390766 | 6_4:-9046140 | None:intergenic |
| TTGCATGATGAAAATGCTAA+TGG | 0.391658 | 6_4:+9047373 | Msa0975300:CDS |
| AGAATCCTCTGAATAAATAA+AGG | 0.394912 | 6_4:-9046183 | None:intergenic |
| CCAGCGGCAGCTACATAGTA+TGG | 0.400600 | 6_4:-9046029 | None:intergenic |
| TATTCACAAAGCGACACTTA+TGG | 0.406837 | 6_4:+9046142 | Msa0975300:CDS |
| CAATGCTATACCAGTTGAAA+TGG | 0.411595 | 6_4:+9045635 | Msa0975300:CDS |
| CCTAGATCTTTCTTCAGGAT+TGG | 0.411662 | 6_4:-9046855 | None:intergenic |
| AGATGTGGATGCCTCGGATT+CGG | 0.414989 | 6_4:+9047306 | Msa0975300:CDS |
| CTCCTCACCAGCAGTAATTA+CGG | 0.416080 | 6_4:-9046936 | None:intergenic |
| CGAAAAGGACTAGGCTGTAT+TGG | 0.416184 | 6_4:+9046063 | Msa0975300:CDS |
| TATACTTGAAGTGCTTCGTT+TGG | 0.418435 | 6_4:+9046457 | Msa0975300:CDS |
| ATGACGTTGTTGAAGAGGTT+GGG | 0.419356 | 6_4:+9045970 | Msa0975300:CDS |
| TATTGTGATAATGTTGTAAC+CGG | 0.423761 | 6_4:+9045324 | Msa0975300:CDS |
| CTATTGCTACTCTTCACAAA+AGG | 0.427098 | 6_4:+9046215 | Msa0975300:CDS |
| CGAGTTTCTTTGATATTGGA+TGG | 0.429120 | 6_4:+9045724 | Msa0975300:CDS |
| CATTGCCCTTTGCATGCTGC+AGG | 0.435557 | 6_4:+9046737 | Msa0975300:CDS |
| GAGTTCGCAAAGACGATGAA+TGG | 0.442280 | 6_4:+9046359 | Msa0975300:CDS |
| ATTCATGAGGAAGGGTATGT+TGG | 0.447492 | 6_4:+9045462 | Msa0975300:CDS |
| GATCACTGGTTGCAGCATAA+TGG | 0.450076 | 6_4:+9045812 | Msa0975300:CDS |
| TCACTTTCTACCATTTCAAC+TGG | 0.450413 | 6_4:-9045645 | None:intergenic |
| CCAATCCTGAAGAAAGATCT+AGG | 0.450590 | 6_4:+9046855 | Msa0975300:CDS |
| CCATACTATGTAGCTGCCGC+TGG | 0.452127 | 6_4:+9046029 | Msa0975300:CDS |
| AAGTTTAGTATGTTCCTCTT+GGG | 0.452190 | 6_4:-9045855 | None:intergenic |
| GTTTAAGACTATGTGTGATT+TGG | 0.454973 | 6_4:+9045671 | Msa0975300:CDS |
| ACAAGACTCCGTCGATAGTA+AGG | 0.456125 | 6_4:+9045563 | Msa0975300:CDS |
| TGCATGATGAAAATGCTAAT+GGG | 0.456134 | 6_4:+9047374 | Msa0975300:CDS |
| CCAGGACTATAGTGAAATTG+AGG | 0.464932 | 6_4:-9046773 | None:intergenic |
| CATCGTCTTTGCGAACTCGC+TGG | 0.467375 | 6_4:-9046354 | None:intergenic |
| CCTCAATTTCACTATAGTCC+TGG | 0.468188 | 6_4:+9046773 | Msa0975300:CDS |
| TGAGAAACTCTTTAAGATGA+TGG | 0.471735 | 6_4:+9045947 | Msa0975300:CDS |
| AAAAGAAAAGGCGGTAAAGA+TGG | 0.472289 | 6_4:+9045495 | Msa0975300:CDS |
| GATAGTTTCAAGAGAAAGAG+AGG | 0.479404 | 6_4:+9045534 | Msa0975300:CDS |
| CTAATATCATCTCTAAATCC+AGG | 0.479848 | 6_4:-9046791 | None:intergenic |
| ATGCTTATATGGCAAATCAT+TGG | 0.481599 | 6_4:+9046701 | Msa0975300:CDS |
| AAACGAAGCACTTCAAGTAT+AGG | 0.486852 | 6_4:-9046455 | None:intergenic |
| CTTGACAGGCAGTTCTTATG+GGG | 0.488717 | 6_4:+9047033 | Msa0975300:CDS |
| GCAAACACTACACTGAACTT+AGG | 0.493453 | 6_4:-9047615 | None:intergenic |
| ATTCGTGTCTTATGCTTGAC+AGG | 0.495931 | 6_4:+9047019 | Msa0975300:CDS |
| GATGCCAATGGAGACGTTGA+AGG | 0.503971 | 6_4:+9047280 | Msa0975300:CDS |
| TAAGGAGAGTTTGAGTGAGG+AGG | 0.505132 | 6_4:+9045581 | Msa0975300:CDS |
| TGTTGATGGCGAAAAGGACT+AGG | 0.505339 | 6_4:+9046054 | Msa0975300:CDS |
| AAGGCGGTAAAGATGGTGTT+GGG | 0.505881 | 6_4:+9045502 | Msa0975300:CDS |
| AGATGGTGTTGGGAGGAATA+GGG | 0.506593 | 6_4:+9045512 | Msa0975300:CDS |
| CTGAAGTGTCTAGCTGATGC+GGG | 0.510022 | 6_4:+9047340 | Msa0975300:CDS |
| TGAACCTTCAACGTCTCCAT+TGG | 0.513051 | 6_4:-9047284 | None:intergenic |
| GGTACACGCTATGAATTTGA+AGG | 0.513715 | 6_4:+9047171 | Msa0975300:intron |
| AATATCCTGCAGCATGCAAA+GGG | 0.513850 | 6_4:-9046742 | None:intergenic |
| CTGGGATGTTGATGGCGAAA+AGG | 0.516498 | 6_4:+9046048 | Msa0975300:CDS |
| GGCAATGGTGAAAGCTATAG+AGG | 0.516764 | 6_4:+9046520 | Msa0975300:CDS |
| TCACTTGATCTTAAACTACA+TGG | 0.517326 | 6_4:+9045279 | Msa0975300:CDS |
| CCTTGTGCAACACATTGCAT+TGG | 0.517858 | 6_4:+9046089 | Msa0975300:CDS |
| GATGACGTTGTTGAAGAGGT+TGG | 0.518847 | 6_4:+9045969 | Msa0975300:CDS |
| GGGTTTCATTTATGAGGCAA+TGG | 0.521666 | 6_4:+9046505 | Msa0975300:CDS |
| TATTGCTACTCTTCACAAAA+GGG | 0.526993 | 6_4:+9046216 | Msa0975300:CDS |
| TTTATTCAGAGGATTCTCTC+AGG | 0.527532 | 6_4:+9046189 | Msa0975300:CDS |
| AGCTGCCGCTGGGATGTTGA+TGG | 0.527540 | 6_4:+9046040 | Msa0975300:CDS |
| AGTTCGCAAAGACGATGAAT+GGG | 0.528816 | 6_4:+9046360 | Msa0975300:CDS |
| GATGGATATGAAGACGAAGA+TGG | 0.530094 | 6_4:+9047433 | Msa0975300:CDS |
| CTGCAGCATGCAAAGGGCAA+TGG | 0.530815 | 6_4:-9046736 | None:intergenic |
| TGAGGTGAAGAAGGAAATGT+TGG | 0.531481 | 6_4:+9045416 | Msa0975300:CDS |
| AAGATGACAAAGAAAGAGAA+AGG | 0.531896 | 6_4:+9046564 | Msa0975300:CDS |
| TATTGATGCGTCTGATATGT+TGG | 0.533209 | 6_4:+9045917 | Msa0975300:CDS |
| GATAAGAATGTTCAAATCCA+AGG | 0.533224 | 6_4:+9046322 | Msa0975300:CDS |
| TGTATCCTTTATTTATTCAG+AGG | 0.536433 | 6_4:+9046178 | Msa0975300:CDS |
| CCAATAGCCGTAATTACTGC+TGG | 0.537059 | 6_4:+9046929 | Msa0975300:CDS |
| TAGTAAGGAGAGTTTGAGTG+AGG | 0.540366 | 6_4:+9045578 | Msa0975300:CDS |
| TTGTTAGTGAACAGTCCAAA+GGG | 0.540672 | 6_4:+9045876 | Msa0975300:CDS |
| TGCATGTCACTTAACTGGAA+AGG | 0.541872 | 6_4:+9045362 | Msa0975300:CDS |
| CAGGACTATAGTGAAATTGA+GGG | 0.542010 | 6_4:-9046772 | None:intergenic |
| AAAGGCGGTAAAGATGGTGT+TGG | 0.542026 | 6_4:+9045501 | Msa0975300:CDS |
| TGACGTTGTTGAAGAGGTTG+GGG | 0.542773 | 6_4:+9045971 | Msa0975300:CDS |
| GAGGAAGGGTATGTTGGAGT+AGG | 0.543473 | 6_4:+9045468 | Msa0975300:CDS |
| AAAGATGCCCACCAAATTGG+TGG | 0.543579 | 6_4:-9046962 | None:intergenic |
| CTTATATGGCAAATCATTGG+TGG | 0.545709 | 6_4:+9046704 | Msa0975300:CDS |
| GTGATAATGTTGTAACCGGC+GGG | 0.546780 | 6_4:+9045328 | Msa0975300:CDS |
| GGCAAAATATGTTGTTGAAG+TGG | 0.552303 | 6_4:+9045239 | Msa0975300:CDS |
| GATGACGATGGAGATGAAGA+TGG | 0.552380 | 6_4:+9047415 | Msa0975300:CDS |
| AGGTTCAGATGTGGATGCCT+CGG | 0.552820 | 6_4:+9047300 | Msa0975300:CDS |
| GGCAAATCATTGGTGGAACA+TGG | 0.554182 | 6_4:+9046711 | Msa0975300:CDS |
| TTGAAAGAGATTCATGAGGA+AGG | 0.556110 | 6_4:+9045453 | Msa0975300:CDS |
| TGTTGGTGATGAGGTGAAGA+AGG | 0.557137 | 6_4:+9045407 | Msa0975300:CDS |
| TGGGAAATACATTGAGGATG+CGG | 0.557967 | 6_4:+9046379 | Msa0975300:CDS |
| TTGTGAGGGTGTTGGTGATG+AGG | 0.559046 | 6_4:+9045398 | Msa0975300:CDS |
| AGGCATGTCGAGCGGTTGCA+AGG | 0.561168 | 6_4:+9045601 | Msa0975300:CDS |
| AGAGCTATGTGGAAGATCAC+TGG | 0.561392 | 6_4:+9045798 | Msa0975300:CDS |
| AGGAGACTCCACCAATTTGG+TGG | 0.563322 | 6_4:+9046954 | Msa0975300:CDS |
| AAATATCCTGCAGCATGCAA+AGG | 0.563551 | 6_4:-9046743 | None:intergenic |
| GTTGAAGCTTGTGAGGGTGT+TGG | 0.568205 | 6_4:+9045390 | Msa0975300:CDS |
| TGAAAGAGATTCATGAGGAA+GGG | 0.568654 | 6_4:+9045454 | Msa0975300:CDS |
| CTCATGAATCTCTTTCAAAG+TGG | 0.568820 | 6_4:-9045448 | None:intergenic |
| TAATCGGAAGGCCTTCGAGA+TGG | 0.573794 | 6_4:+9047063 | Msa0975300:CDS |
| TCATAAATGAAACCCATGGT+TGG | 0.578573 | 6_4:-9046497 | None:intergenic |
| AAATGTTGTCCATGTTGTAA+CGG | 0.579800 | 6_4:+9045998 | Msa0975300:CDS |
| TTATCATCTTACCATCTCGA+AGG | 0.581219 | 6_4:-9047074 | None:intergenic |
| TTGGTTTCAAGACATGGCGT+AGG | 0.585999 | 6_4:+9045690 | Msa0975300:CDS |
| GTGTATATTCCGTTACAACA+TGG | 0.586670 | 6_4:-9046007 | None:intergenic |
| GATGGATGACGTTGTTGAAG+AGG | 0.589606 | 6_4:+9045965 | Msa0975300:CDS |
| TGTGATAATGTTGTAACCGG+CGG | 0.592762 | 6_4:+9045327 | Msa0975300:CDS |
| GAATGTTCAAATCCAAGGAG+TGG | 0.592797 | 6_4:+9046327 | Msa0975300:CDS |
| GAGCTAAATCTTGATGCCAA+TGG | 0.595617 | 6_4:+9047268 | Msa0975300:CDS |
| TGTTGTCTTCATGAGAACAA+AGG | 0.597006 | 6_4:+9046293 | Msa0975300:CDS |
| TGTGATTTGGTTTCAAGACA+TGG | 0.603629 | 6_4:+9045684 | Msa0975300:CDS |
| CTTGTTAGTGAACAGTCCAA+AGG | 0.605024 | 6_4:+9045875 | Msa0975300:CDS |
| GAATGATGCTGCAACACTGT+GGG | 0.607626 | 6_4:+9046111 | Msa0975300:CDS |
| TCTGAAGTGTCTAGCTGATG+CGG | 0.607819 | 6_4:+9047339 | Msa0975300:CDS |
| AGCCGTAATTACTGCTGGTG+AGG | 0.609038 | 6_4:+9046934 | Msa0975300:CDS |
| GATGAATGGGAAATACATTG+AGG | 0.609052 | 6_4:+9046373 | Msa0975300:CDS |
| CATCCAATATCAAAGAAACT+CGG | 0.610975 | 6_4:-9045723 | None:intergenic |
| CATACTATGTAGCTGCCGCT+GGG | 0.612870 | 6_4:+9046030 | Msa0975300:CDS |
| TGGAAGAACATAGAGCTATG+TGG | 0.616519 | 6_4:+9045787 | Msa0975300:CDS |
| GGAAAATGTTGAAGCTTGTG+AGG | 0.619175 | 6_4:+9045383 | Msa0975300:CDS |
| GAGTGAGGAGGCATGTCGAG+CGG | 0.620889 | 6_4:+9045593 | Msa0975300:CDS |
| TTCAATCGAGAAACCAACCA+TGG | 0.626609 | 6_4:+9046484 | Msa0975300:CDS |
| AAGCTATAGAGGAGATACAG+AGG | 0.627859 | 6_4:+9046531 | Msa0975300:CDS |
| ACAACATTGTATAACAAGGA+TGG | 0.628564 | 6_4:+9046829 | Msa0975300:CDS |
| TATTTACTAACTTTCCCAAG+AGG | 0.628639 | 6_4:+9045841 | Msa0975300:CDS |
| GGAGACTCCACCAATTTGGT+GGG | 0.636055 | 6_4:+9046955 | Msa0975300:CDS |
| GCGGTAAAGATGGTGTTGGG+AGG | 0.636309 | 6_4:+9045505 | Msa0975300:CDS |
| CAAACTCTCCTTACTATCGA+CGG | 0.640889 | 6_4:-9045571 | None:intergenic |
| TCAATCGAGAAACCAACCAT+GGG | 0.641500 | 6_4:+9046485 | Msa0975300:CDS |
| GTCTACAACATTGTATAACA+AGG | 0.644114 | 6_4:+9046825 | Msa0975300:CDS |
| TGCCTCATAAATGAAACCCA+TGG | 0.649986 | 6_4:-9046501 | None:intergenic |
| GATGAAAACAGAGATGACGA+TGG | 0.654534 | 6_4:+9047403 | Msa0975300:CDS |
| GCATGATGAAAATGCTAATG+GGG | 0.655477 | 6_4:+9047375 | Msa0975300:CDS |
| TCAGCTAGACACTTCAGACA+TGG | 0.662394 | 6_4:-9047334 | None:intergenic |
| CACTTTGAAAGAGATTCATG+AGG | 0.664505 | 6_4:+9045449 | Msa0975300:CDS |
| CCAATGCAATGTGTTGCACA+AGG | 0.671669 | 6_4:-9046089 | None:intergenic |
| AGACGTTGAAGGTTCAGATG+TGG | 0.676100 | 6_4:+9047291 | Msa0975300:CDS |
| TGCAAATCGATAAAACCCGC+CGG | 0.677860 | 6_4:-9045343 | None:intergenic |
| TGAAGTGTCTAGCTGATGCG+GGG | 0.678573 | 6_4:+9047341 | Msa0975300:CDS |
| TTGACAGGCAGTTCTTATGG+GGG | 0.679913 | 6_4:+9047034 | Msa0975300:CDS |
| GGAATGATGCTGCAACACTG+TGG | 0.696932 | 6_4:+9046110 | Msa0975300:CDS |
| CCAATATCAAAGAAACTCGG+TGG | 0.701325 | 6_4:-9045720 | None:intergenic |
| GAAAATGTTGAAGCTTGTGA+GGG | 0.712536 | 6_4:+9045384 | Msa0975300:CDS |
| AATGATGCTGCAACACTGTG+GGG | 0.732486 | 6_4:+9046112 | Msa0975300:CDS |
| TTTCGCCATCAACATCCCAG+CGG | 0.744186 | 6_4:-9046045 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGTTATGATTTGTTATAA+AGG | + | chr6_4:9046425-9046444 | Msa0975300:CDS | 15.0% |
| !!! | AATGTTATGATTTGTTATAA+AGG | + | chr6_4:9046425-9046444 | Msa0975300:CDS | 15.0% |
| !! | TAAGCATAGTACTAAAAAAA+TGG | - | chr6_4:9046688-9046707 | None:intergenic | 20.0% |
| !!! | TTTTTAGTACTATGCTTATA+TGG | + | chr6_4:9046690-9046709 | Msa0975300:intron | 20.0% |
| !!! | TAATAGGTATTTTACAATTC+AGG | - | chr6_4:9047111-9047130 | None:intergenic | 20.0% |
| !! | TAAGCATAGTACTAAAAAAA+TGG | - | chr6_4:9046688-9046707 | None:intergenic | 20.0% |
| !!! | TTTTTAGTACTATGCTTATA+TGG | + | chr6_4:9046690-9046709 | Msa0975300:intron | 20.0% |
| !!! | TAATAGGTATTTTACAATTC+AGG | - | chr6_4:9047111-9047130 | None:intergenic | 20.0% |
| !! | TATTTTGCCACTATCTTTTT+AGG | - | chr6_4:9045228-9045247 | None:intergenic | 25.0% |
| !! | TATTGTGATAATGTTGTAAC+CGG | + | chr6_4:9045324-9045343 | Msa0975300:CDS | 25.0% |
| !! | TATTGGATGGAAATATTTTC+CGG | + | chr6_4:9045737-9045756 | Msa0975300:CDS | 25.0% |
| !! | TGTATCCTTTATTTATTCAG+AGG | + | chr6_4:9046178-9046197 | Msa0975300:CDS | 25.0% |
| ! | AGAATCCTCTGAATAAATAA+AGG | - | chr6_4:9046186-9046205 | None:intergenic | 25.0% |
| ! | TCACAAAAGGGATATATATT+TGG | + | chr6_4:9046228-9046247 | Msa0975300:CDS | 25.0% |
| ! | AAGAGAAAGGTAAATATGTT+CGG | + | chr6_4:9046577-9046596 | Msa0975300:intron | 25.0% |
| ! | TATCAAGGATAGAAAGTAAT+AGG | - | chr6_4:9047127-9047146 | None:intergenic | 25.0% |
| ! | AATCGTATTTGCATATGTTT+AGG | + | chr6_4:9047150-9047169 | Msa0975300:intron | 25.0% |
| !!! | TAATGATGTTGTTTTTGTCA+TGG | + | chr6_4:9047207-9047226 | Msa0975300:CDS | 25.0% |
| !! | AATTGATGTTCTCTTCTTTT+CGG | - | chr6_4:9047248-9047267 | None:intergenic | 25.0% |
| ! | AGATGGAGATGAAAATTAAA+TGG | + | chr6_4:9047450-9047469 | Msa0975300:exon | 25.0% |
| !! | TATTTTGCCACTATCTTTTT+AGG | - | chr6_4:9045228-9045247 | None:intergenic | 25.0% |
| !! | TATTGTGATAATGTTGTAAC+CGG | + | chr6_4:9045324-9045343 | Msa0975300:CDS | 25.0% |
| !! | TATTGGATGGAAATATTTTC+CGG | + | chr6_4:9045737-9045756 | Msa0975300:CDS | 25.0% |
| !! | TGTATCCTTTATTTATTCAG+AGG | + | chr6_4:9046178-9046197 | Msa0975300:CDS | 25.0% |
| ! | AGAATCCTCTGAATAAATAA+AGG | - | chr6_4:9046186-9046205 | None:intergenic | 25.0% |
| ! | TCACAAAAGGGATATATATT+TGG | + | chr6_4:9046228-9046247 | Msa0975300:CDS | 25.0% |
| ! | AAGAGAAAGGTAAATATGTT+CGG | + | chr6_4:9046577-9046596 | Msa0975300:intron | 25.0% |
| ! | TATCAAGGATAGAAAGTAAT+AGG | - | chr6_4:9047127-9047146 | None:intergenic | 25.0% |
| ! | AATCGTATTTGCATATGTTT+AGG | + | chr6_4:9047150-9047169 | Msa0975300:intron | 25.0% |
| !!! | TAATGATGTTGTTTTTGTCA+TGG | + | chr6_4:9047207-9047226 | Msa0975300:CDS | 25.0% |
| !! | AATTGATGTTCTCTTCTTTT+CGG | - | chr6_4:9047248-9047267 | None:intergenic | 25.0% |
| ! | AGATGGAGATGAAAATTAAA+TGG | + | chr6_4:9047450-9047469 | Msa0975300:exon | 25.0% |
| TCACTTGATCTTAAACTACA+TGG | + | chr6_4:9045279-9045298 | Msa0975300:CDS | 30.0% | |
| ! | GTTTAAGACTATGTGTGATT+TGG | + | chr6_4:9045671-9045690 | Msa0975300:CDS | 30.0% |
| CATCCAATATCAAAGAAACT+CGG | - | chr6_4:9045726-9045745 | None:intergenic | 30.0% | |
| TTCGTCAACTTAATATCTTC+CGG | - | chr6_4:9045759-9045778 | None:intergenic | 30.0% | |
| !! | TAAGTTGACGAATGAAGTTT+TGG | + | chr6_4:9045767-9045786 | Msa0975300:CDS | 30.0% |
| TATTTACTAACTTTCCCAAG+AGG | + | chr6_4:9045841-9045860 | Msa0975300:CDS | 30.0% | |
| AAGTTTAGTATGTTCCTCTT+GGG | - | chr6_4:9045858-9045877 | None:intergenic | 30.0% | |
| TTCAAAAAGAATGTTCCCTT+TGG | - | chr6_4:9045894-9045913 | None:intergenic | 30.0% | |
| !! | TGAGAAACTCTTTAAGATGA+TGG | + | chr6_4:9045947-9045966 | Msa0975300:CDS | 30.0% |
| AAATGTTGTCCATGTTGTAA+CGG | + | chr6_4:9045998-9046017 | Msa0975300:CDS | 30.0% | |
| TATTGCTACTCTTCACAAAA+GGG | + | chr6_4:9046216-9046235 | Msa0975300:CDS | 30.0% | |
| GGGATATATATTTGGAAAGT+TGG | + | chr6_4:9046236-9046255 | Msa0975300:CDS | 30.0% | |
| GATAAGAATGTTCAAATCCA+AGG | + | chr6_4:9046322-9046341 | Msa0975300:CDS | 30.0% | |
| TTCTCTTTCTTTGTCATCTT+CGG | - | chr6_4:9046564-9046583 | None:intergenic | 30.0% | |
| AAGATGACAAAGAAAGAGAA+AGG | + | chr6_4:9046564-9046583 | Msa0975300:CDS | 30.0% | |
| ATGCTTATATGGCAAATCAT+TGG | + | chr6_4:9046701-9046720 | Msa0975300:CDS | 30.0% | |
| CTAATATCATCTCTAAATCC+AGG | - | chr6_4:9046794-9046813 | None:intergenic | 30.0% | |
| GTCTACAACATTGTATAACA+AGG | + | chr6_4:9046825-9046844 | Msa0975300:CDS | 30.0% | |
| ACAACATTGTATAACAAGGA+TGG | + | chr6_4:9046829-9046848 | Msa0975300:CDS | 30.0% | |
| ACTTGAAGATTTCGAAAAAC+AGG | + | chr6_4:9046889-9046908 | Msa0975300:CDS | 30.0% | |
| ! | GAAAAACAGGCTAATCATTT+TGG | + | chr6_4:9046902-9046921 | Msa0975300:CDS | 30.0% |
| GCAAATACGATTAAGTATCA+AGG | - | chr6_4:9047142-9047161 | None:intergenic | 30.0% | |
| TTGCATGATGAAAATGCTAA+TGG | + | chr6_4:9047373-9047392 | Msa0975300:CDS | 30.0% | |
| TGCATGATGAAAATGCTAAT+GGG | + | chr6_4:9047374-9047393 | Msa0975300:CDS | 30.0% | |
| !!! | AGAATTTGACTCCTTGTTTT+TGG | + | chr6_4:9047516-9047535 | Msa0975300:three_prime_UTR | 30.0% |
| AGATGTAAACACCAAAAACA+AGG | - | chr6_4:9047530-9047549 | None:intergenic | 30.0% | |
| TCACTTGATCTTAAACTACA+TGG | + | chr6_4:9045279-9045298 | Msa0975300:CDS | 30.0% | |
| ! | GTTTAAGACTATGTGTGATT+TGG | + | chr6_4:9045671-9045690 | Msa0975300:CDS | 30.0% |
| CATCCAATATCAAAGAAACT+CGG | - | chr6_4:9045726-9045745 | None:intergenic | 30.0% | |
| TTCGTCAACTTAATATCTTC+CGG | - | chr6_4:9045759-9045778 | None:intergenic | 30.0% | |
| !! | TAAGTTGACGAATGAAGTTT+TGG | + | chr6_4:9045767-9045786 | Msa0975300:CDS | 30.0% |
| TATTTACTAACTTTCCCAAG+AGG | + | chr6_4:9045841-9045860 | Msa0975300:CDS | 30.0% | |
| AAGTTTAGTATGTTCCTCTT+GGG | - | chr6_4:9045858-9045877 | None:intergenic | 30.0% | |
| TTCAAAAAGAATGTTCCCTT+TGG | - | chr6_4:9045894-9045913 | None:intergenic | 30.0% | |
| !! | TGAGAAACTCTTTAAGATGA+TGG | + | chr6_4:9045947-9045966 | Msa0975300:CDS | 30.0% |
| AAATGTTGTCCATGTTGTAA+CGG | + | chr6_4:9045998-9046017 | Msa0975300:CDS | 30.0% | |
| TATTGCTACTCTTCACAAAA+GGG | + | chr6_4:9046216-9046235 | Msa0975300:CDS | 30.0% | |
| GGGATATATATTTGGAAAGT+TGG | + | chr6_4:9046236-9046255 | Msa0975300:CDS | 30.0% | |
| GATAAGAATGTTCAAATCCA+AGG | + | chr6_4:9046322-9046341 | Msa0975300:CDS | 30.0% | |
| TTCTCTTTCTTTGTCATCTT+CGG | - | chr6_4:9046564-9046583 | None:intergenic | 30.0% | |
| AAGATGACAAAGAAAGAGAA+AGG | + | chr6_4:9046564-9046583 | Msa0975300:CDS | 30.0% | |
| ATGCTTATATGGCAAATCAT+TGG | + | chr6_4:9046701-9046720 | Msa0975300:CDS | 30.0% | |
| CTAATATCATCTCTAAATCC+AGG | - | chr6_4:9046794-9046813 | None:intergenic | 30.0% | |
| GTCTACAACATTGTATAACA+AGG | + | chr6_4:9046825-9046844 | Msa0975300:CDS | 30.0% | |
| ACAACATTGTATAACAAGGA+TGG | + | chr6_4:9046829-9046848 | Msa0975300:CDS | 30.0% | |
| ACTTGAAGATTTCGAAAAAC+AGG | + | chr6_4:9046889-9046908 | Msa0975300:CDS | 30.0% | |
| ! | GAAAAACAGGCTAATCATTT+TGG | + | chr6_4:9046902-9046921 | Msa0975300:CDS | 30.0% |
| GCAAATACGATTAAGTATCA+AGG | - | chr6_4:9047142-9047161 | None:intergenic | 30.0% | |
| TTGCATGATGAAAATGCTAA+TGG | + | chr6_4:9047373-9047392 | Msa0975300:CDS | 30.0% | |
| TGCATGATGAAAATGCTAAT+GGG | + | chr6_4:9047374-9047393 | Msa0975300:CDS | 30.0% | |
| !!! | AGAATTTGACTCCTTGTTTT+TGG | + | chr6_4:9047516-9047535 | Msa0975300:three_prime_UTR | 30.0% |
| AGATGTAAACACCAAAAACA+AGG | - | chr6_4:9047530-9047549 | None:intergenic | 30.0% | |
| GGCAAAATATGTTGTTGAAG+TGG | + | chr6_4:9045239-9045258 | Msa0975300:CDS | 35.0% | |
| GAAAATGTTGAAGCTTGTGA+GGG | + | chr6_4:9045384-9045403 | Msa0975300:CDS | 35.0% | |
| CTCATGAATCTCTTTCAAAG+TGG | - | chr6_4:9045451-9045470 | None:intergenic | 35.0% | |
| ! | CACTTTGAAAGAGATTCATG+AGG | + | chr6_4:9045449-9045468 | Msa0975300:CDS | 35.0% |
| TTGAAAGAGATTCATGAGGA+AGG | + | chr6_4:9045453-9045472 | Msa0975300:CDS | 35.0% | |
| TGAAAGAGATTCATGAGGAA+GGG | + | chr6_4:9045454-9045473 | Msa0975300:CDS | 35.0% | |
| GGAGTAGGTGAAAAAAGAAA+AGG | + | chr6_4:9045483-9045502 | Msa0975300:CDS | 35.0% | |
| GTAGGTGAAAAAAGAAAAGG+CGG | + | chr6_4:9045486-9045505 | Msa0975300:CDS | 35.0% | |
| AAAAGAAAAGGCGGTAAAGA+TGG | + | chr6_4:9045495-9045514 | Msa0975300:CDS | 35.0% | |
| GATAGTTTCAAGAGAAAGAG+AGG | + | chr6_4:9045534-9045553 | Msa0975300:CDS | 35.0% | |
| CAATGCTATACCAGTTGAAA+TGG | + | chr6_4:9045635-9045654 | Msa0975300:CDS | 35.0% | |
| TCACTTTCTACCATTTCAAC+TGG | - | chr6_4:9045648-9045667 | None:intergenic | 35.0% | |
| !! | TGTGATTTGGTTTCAAGACA+TGG | + | chr6_4:9045684-9045703 | Msa0975300:CDS | 35.0% |
| CGAGTTTCTTTGATATTGGA+TGG | + | chr6_4:9045724-9045743 | Msa0975300:CDS | 35.0% | |
| CAAGTTTAGTATGTTCCTCT+TGG | - | chr6_4:9045859-9045878 | None:intergenic | 35.0% | |
| TTGTTAGTGAACAGTCCAAA+GGG | + | chr6_4:9045876-9045895 | Msa0975300:CDS | 35.0% | |
| TATTGATGCGTCTGATATGT+TGG | + | chr6_4:9045917-9045936 | Msa0975300:CDS | 35.0% | |
| GTGTATATTCCGTTACAACA+TGG | - | chr6_4:9046010-9046029 | None:intergenic | 35.0% | |
| !! | ATAAGTGTCGCTTTGTGAAT+AGG | - | chr6_4:9046143-9046162 | None:intergenic | 35.0% |
| TATTCACAAAGCGACACTTA+TGG | + | chr6_4:9046142-9046161 | Msa0975300:CDS | 35.0% | |
| TTTATTCAGAGGATTCTCTC+AGG | + | chr6_4:9046189-9046208 | Msa0975300:CDS | 35.0% | |
| CTATTGCTACTCTTCACAAA+AGG | + | chr6_4:9046215-9046234 | Msa0975300:CDS | 35.0% | |
| TGTTGTCTTCATGAGAACAA+AGG | + | chr6_4:9046293-9046312 | Msa0975300:CDS | 35.0% | |
| GATGAATGGGAAATACATTG+AGG | + | chr6_4:9046373-9046392 | Msa0975300:CDS | 35.0% | |
| ! | AAACGAAGCACTTCAAGTAT+AGG | - | chr6_4:9046458-9046477 | None:intergenic | 35.0% |
| ! | TATACTTGAAGTGCTTCGTT+TGG | + | chr6_4:9046457-9046476 | Msa0975300:CDS | 35.0% |
| TCATAAATGAAACCCATGGT+TGG | - | chr6_4:9046500-9046519 | None:intergenic | 35.0% | |
| AACCATGGGTTTCATTTATG+AGG | + | chr6_4:9046499-9046518 | Msa0975300:CDS | 35.0% | |
| !!! | GAACATTTGTTTTGCAGTCT+TGG | + | chr6_4:9046632-9046651 | Msa0975300:intron | 35.0% |
| CTTATATGGCAAATCATTGG+TGG | + | chr6_4:9046704-9046723 | Msa0975300:CDS | 35.0% | |
| CAGGACTATAGTGAAATTGA+GGG | - | chr6_4:9046775-9046794 | None:intergenic | 35.0% | |
| TCAATCCTAGATCTTTCTTC+AGG | - | chr6_4:9046863-9046882 | None:intergenic | 35.0% | |
| TTATCATCTTACCATCTCGA+AGG | - | chr6_4:9047077-9047096 | None:intergenic | 35.0% | |
| GCATGATGAAAATGCTAATG+GGG | + | chr6_4:9047375-9047394 | Msa0975300:CDS | 35.0% | |
| GGCAAAATATGTTGTTGAAG+TGG | + | chr6_4:9045239-9045258 | Msa0975300:CDS | 35.0% | |
| GAAAATGTTGAAGCTTGTGA+GGG | + | chr6_4:9045384-9045403 | Msa0975300:CDS | 35.0% | |
| CTCATGAATCTCTTTCAAAG+TGG | - | chr6_4:9045451-9045470 | None:intergenic | 35.0% | |
| ! | CACTTTGAAAGAGATTCATG+AGG | + | chr6_4:9045449-9045468 | Msa0975300:CDS | 35.0% |
| TTGAAAGAGATTCATGAGGA+AGG | + | chr6_4:9045453-9045472 | Msa0975300:CDS | 35.0% | |
| TGAAAGAGATTCATGAGGAA+GGG | + | chr6_4:9045454-9045473 | Msa0975300:CDS | 35.0% | |
| GGAGTAGGTGAAAAAAGAAA+AGG | + | chr6_4:9045483-9045502 | Msa0975300:CDS | 35.0% | |
| GTAGGTGAAAAAAGAAAAGG+CGG | + | chr6_4:9045486-9045505 | Msa0975300:CDS | 35.0% | |
| AAAAGAAAAGGCGGTAAAGA+TGG | + | chr6_4:9045495-9045514 | Msa0975300:CDS | 35.0% | |
| GATAGTTTCAAGAGAAAGAG+AGG | + | chr6_4:9045534-9045553 | Msa0975300:CDS | 35.0% | |
| CAATGCTATACCAGTTGAAA+TGG | + | chr6_4:9045635-9045654 | Msa0975300:CDS | 35.0% | |
| TCACTTTCTACCATTTCAAC+TGG | - | chr6_4:9045648-9045667 | None:intergenic | 35.0% | |
| !! | TGTGATTTGGTTTCAAGACA+TGG | + | chr6_4:9045684-9045703 | Msa0975300:CDS | 35.0% |
| CGAGTTTCTTTGATATTGGA+TGG | + | chr6_4:9045724-9045743 | Msa0975300:CDS | 35.0% | |
| CAAGTTTAGTATGTTCCTCT+TGG | - | chr6_4:9045859-9045878 | None:intergenic | 35.0% | |
| TTGTTAGTGAACAGTCCAAA+GGG | + | chr6_4:9045876-9045895 | Msa0975300:CDS | 35.0% | |
| TATTGATGCGTCTGATATGT+TGG | + | chr6_4:9045917-9045936 | Msa0975300:CDS | 35.0% | |
| GTGTATATTCCGTTACAACA+TGG | - | chr6_4:9046010-9046029 | None:intergenic | 35.0% | |
| !! | ATAAGTGTCGCTTTGTGAAT+AGG | - | chr6_4:9046143-9046162 | None:intergenic | 35.0% |
| TATTCACAAAGCGACACTTA+TGG | + | chr6_4:9046142-9046161 | Msa0975300:CDS | 35.0% | |
| TTTATTCAGAGGATTCTCTC+AGG | + | chr6_4:9046189-9046208 | Msa0975300:CDS | 35.0% | |
| CTATTGCTACTCTTCACAAA+AGG | + | chr6_4:9046215-9046234 | Msa0975300:CDS | 35.0% | |
| TGTTGTCTTCATGAGAACAA+AGG | + | chr6_4:9046293-9046312 | Msa0975300:CDS | 35.0% | |
| GATGAATGGGAAATACATTG+AGG | + | chr6_4:9046373-9046392 | Msa0975300:CDS | 35.0% | |
| ! | AAACGAAGCACTTCAAGTAT+AGG | - | chr6_4:9046458-9046477 | None:intergenic | 35.0% |
| ! | TATACTTGAAGTGCTTCGTT+TGG | + | chr6_4:9046457-9046476 | Msa0975300:CDS | 35.0% |
| TCATAAATGAAACCCATGGT+TGG | - | chr6_4:9046500-9046519 | None:intergenic | 35.0% | |
| AACCATGGGTTTCATTTATG+AGG | + | chr6_4:9046499-9046518 | Msa0975300:CDS | 35.0% | |
| !!! | GAACATTTGTTTTGCAGTCT+TGG | + | chr6_4:9046632-9046651 | Msa0975300:intron | 35.0% |
| CTTATATGGCAAATCATTGG+TGG | + | chr6_4:9046704-9046723 | Msa0975300:CDS | 35.0% | |
| CAGGACTATAGTGAAATTGA+GGG | - | chr6_4:9046775-9046794 | None:intergenic | 35.0% | |
| TCAATCCTAGATCTTTCTTC+AGG | - | chr6_4:9046863-9046882 | None:intergenic | 35.0% | |
| TTATCATCTTACCATCTCGA+AGG | - | chr6_4:9047077-9047096 | None:intergenic | 35.0% | |
| GCATGATGAAAATGCTAATG+GGG | + | chr6_4:9047375-9047394 | Msa0975300:CDS | 35.0% | |
| ! | TGTGATAATGTTGTAACCGG+CGG | + | chr6_4:9045327-9045346 | Msa0975300:CDS | 40.0% |
| ! | CGATTTGCATGTCACTTAAC+TGG | + | chr6_4:9045357-9045376 | Msa0975300:CDS | 40.0% |
| ! | TGCATGTCACTTAACTGGAA+AGG | + | chr6_4:9045362-9045381 | Msa0975300:CDS | 40.0% |
| GGAAAATGTTGAAGCTTGTG+AGG | + | chr6_4:9045383-9045402 | Msa0975300:CDS | 40.0% | |
| TGAGGTGAAGAAGGAAATGT+TGG | + | chr6_4:9045416-9045435 | Msa0975300:CDS | 40.0% | |
| ! | ATTCATGAGGAAGGGTATGT+TGG | + | chr6_4:9045462-9045481 | Msa0975300:CDS | 40.0% |
| CAAACTCTCCTTACTATCGA+CGG | - | chr6_4:9045574-9045593 | None:intergenic | 40.0% | |
| TAGTAAGGAGAGTTTGAGTG+AGG | + | chr6_4:9045578-9045597 | Msa0975300:CDS | 40.0% | |
| CCAATATCAAAGAAACTCGG+TGG | - | chr6_4:9045723-9045742 | None:intergenic | 40.0% | |
| CCACCGAGTTTCTTTGATAT+TGG | + | chr6_4:9045720-9045739 | Msa0975300:CDS | 40.0% | |
| TGGAAGAACATAGAGCTATG+TGG | + | chr6_4:9045787-9045806 | Msa0975300:CDS | 40.0% | |
| CTTGTTAGTGAACAGTCCAA+AGG | + | chr6_4:9045875-9045894 | Msa0975300:CDS | 40.0% | |
| ATGACGTTGTTGAAGAGGTT+GGG | + | chr6_4:9045970-9045989 | Msa0975300:CDS | 40.0% | |
| GAATGTTCAAATCCAAGGAG+TGG | + | chr6_4:9046327-9046346 | Msa0975300:CDS | 40.0% | |
| AGTTCGCAAAGACGATGAAT+GGG | + | chr6_4:9046360-9046379 | Msa0975300:CDS | 40.0% | |
| TGGGAAATACATTGAGGATG+CGG | + | chr6_4:9046379-9046398 | Msa0975300:CDS | 40.0% | |
| ! | CGGTTTTGCACAAAAGGTTT+TGG | + | chr6_4:9046399-9046418 | Msa0975300:CDS | 40.0% |
| TTCAATCGAGAAACCAACCA+TGG | + | chr6_4:9046484-9046503 | Msa0975300:CDS | 40.0% | |
| TCAATCGAGAAACCAACCAT+GGG | + | chr6_4:9046485-9046504 | Msa0975300:CDS | 40.0% | |
| TGCCTCATAAATGAAACCCA+TGG | - | chr6_4:9046504-9046523 | None:intergenic | 40.0% | |
| GGGTTTCATTTATGAGGCAA+TGG | + | chr6_4:9046505-9046524 | Msa0975300:CDS | 40.0% | |
| AAGCTATAGAGGAGATACAG+AGG | + | chr6_4:9046531-9046550 | Msa0975300:CDS | 40.0% | |
| GAAAGGTAAATATGTTCGGC+AGG | + | chr6_4:9046581-9046600 | Msa0975300:intron | 40.0% | |
| AATATCCTGCAGCATGCAAA+GGG | - | chr6_4:9046745-9046764 | None:intergenic | 40.0% | |
| AAATATCCTGCAGCATGCAA+AGG | - | chr6_4:9046746-9046765 | None:intergenic | 40.0% | |
| CCAGGACTATAGTGAAATTG+AGG | - | chr6_4:9046776-9046795 | None:intergenic | 40.0% | |
| CCTCAATTTCACTATAGTCC+TGG | + | chr6_4:9046773-9046792 | Msa0975300:CDS | 40.0% | |
| CCTAGATCTTTCTTCAGGAT+TGG | - | chr6_4:9046858-9046877 | None:intergenic | 40.0% | |
| CCAATCCTGAAGAAAGATCT+AGG | + | chr6_4:9046855-9046874 | Msa0975300:CDS | 40.0% | |
| AGACACGAATTGCGAAATTC+TGG | - | chr6_4:9047009-9047028 | None:intergenic | 40.0% | |
| ATTCGTGTCTTATGCTTGAC+AGG | + | chr6_4:9047019-9047038 | Msa0975300:CDS | 40.0% | |
| GGTACACGCTATGAATTTGA+AGG | + | chr6_4:9047171-9047190 | Msa0975300:intron | 40.0% | |
| GAGCTAAATCTTGATGCCAA+TGG | + | chr6_4:9047268-9047287 | Msa0975300:CDS | 40.0% | |
| GATGAAAACAGAGATGACGA+TGG | + | chr6_4:9047403-9047422 | Msa0975300:CDS | 40.0% | |
| GATGGATATGAAGACGAAGA+TGG | + | chr6_4:9047433-9047452 | Msa0975300:CDS | 40.0% | |
| GCAAACACTACACTGAACTT+AGG | - | chr6_4:9047618-9047637 | None:intergenic | 40.0% | |
| ! | TGTGATAATGTTGTAACCGG+CGG | + | chr6_4:9045327-9045346 | Msa0975300:CDS | 40.0% |
| ! | CGATTTGCATGTCACTTAAC+TGG | + | chr6_4:9045357-9045376 | Msa0975300:CDS | 40.0% |
| ! | TGCATGTCACTTAACTGGAA+AGG | + | chr6_4:9045362-9045381 | Msa0975300:CDS | 40.0% |
| GGAAAATGTTGAAGCTTGTG+AGG | + | chr6_4:9045383-9045402 | Msa0975300:CDS | 40.0% | |
| TGAGGTGAAGAAGGAAATGT+TGG | + | chr6_4:9045416-9045435 | Msa0975300:CDS | 40.0% | |
| ! | ATTCATGAGGAAGGGTATGT+TGG | + | chr6_4:9045462-9045481 | Msa0975300:CDS | 40.0% |
| CAAACTCTCCTTACTATCGA+CGG | - | chr6_4:9045574-9045593 | None:intergenic | 40.0% | |
| TAGTAAGGAGAGTTTGAGTG+AGG | + | chr6_4:9045578-9045597 | Msa0975300:CDS | 40.0% | |
| CCAATATCAAAGAAACTCGG+TGG | - | chr6_4:9045723-9045742 | None:intergenic | 40.0% | |
| CCACCGAGTTTCTTTGATAT+TGG | + | chr6_4:9045720-9045739 | Msa0975300:CDS | 40.0% | |
| TGGAAGAACATAGAGCTATG+TGG | + | chr6_4:9045787-9045806 | Msa0975300:CDS | 40.0% | |
| CTTGTTAGTGAACAGTCCAA+AGG | + | chr6_4:9045875-9045894 | Msa0975300:CDS | 40.0% | |
| ATGACGTTGTTGAAGAGGTT+GGG | + | chr6_4:9045970-9045989 | Msa0975300:CDS | 40.0% | |
| GAATGTTCAAATCCAAGGAG+TGG | + | chr6_4:9046327-9046346 | Msa0975300:CDS | 40.0% | |
| AGTTCGCAAAGACGATGAAT+GGG | + | chr6_4:9046360-9046379 | Msa0975300:CDS | 40.0% | |
| TGGGAAATACATTGAGGATG+CGG | + | chr6_4:9046379-9046398 | Msa0975300:CDS | 40.0% | |
| ! | CGGTTTTGCACAAAAGGTTT+TGG | + | chr6_4:9046399-9046418 | Msa0975300:CDS | 40.0% |
| TTCAATCGAGAAACCAACCA+TGG | + | chr6_4:9046484-9046503 | Msa0975300:CDS | 40.0% | |
| TCAATCGAGAAACCAACCAT+GGG | + | chr6_4:9046485-9046504 | Msa0975300:CDS | 40.0% | |
| TGCCTCATAAATGAAACCCA+TGG | - | chr6_4:9046504-9046523 | None:intergenic | 40.0% | |
| GGGTTTCATTTATGAGGCAA+TGG | + | chr6_4:9046505-9046524 | Msa0975300:CDS | 40.0% | |
| AAGCTATAGAGGAGATACAG+AGG | + | chr6_4:9046531-9046550 | Msa0975300:CDS | 40.0% | |
| GAAAGGTAAATATGTTCGGC+AGG | + | chr6_4:9046581-9046600 | Msa0975300:intron | 40.0% | |
| AATATCCTGCAGCATGCAAA+GGG | - | chr6_4:9046745-9046764 | None:intergenic | 40.0% | |
| AAATATCCTGCAGCATGCAA+AGG | - | chr6_4:9046746-9046765 | None:intergenic | 40.0% | |
| CCAGGACTATAGTGAAATTG+AGG | - | chr6_4:9046776-9046795 | None:intergenic | 40.0% | |
| CCTCAATTTCACTATAGTCC+TGG | + | chr6_4:9046773-9046792 | Msa0975300:CDS | 40.0% | |
| CCTAGATCTTTCTTCAGGAT+TGG | - | chr6_4:9046858-9046877 | None:intergenic | 40.0% | |
| CCAATCCTGAAGAAAGATCT+AGG | + | chr6_4:9046855-9046874 | Msa0975300:CDS | 40.0% | |
| AGACACGAATTGCGAAATTC+TGG | - | chr6_4:9047009-9047028 | None:intergenic | 40.0% | |
| ATTCGTGTCTTATGCTTGAC+AGG | + | chr6_4:9047019-9047038 | Msa0975300:CDS | 40.0% | |
| GGTACACGCTATGAATTTGA+AGG | + | chr6_4:9047171-9047190 | Msa0975300:intron | 40.0% | |
| GAGCTAAATCTTGATGCCAA+TGG | + | chr6_4:9047268-9047287 | Msa0975300:CDS | 40.0% | |
| GATGAAAACAGAGATGACGA+TGG | + | chr6_4:9047403-9047422 | Msa0975300:CDS | 40.0% | |
| GATGGATATGAAGACGAAGA+TGG | + | chr6_4:9047433-9047452 | Msa0975300:CDS | 40.0% | |
| GCAAACACTACACTGAACTT+AGG | - | chr6_4:9047618-9047637 | None:intergenic | 40.0% | |
| ! | GTGATAATGTTGTAACCGGC+GGG | + | chr6_4:9045328-9045347 | Msa0975300:CDS | 45.0% |
| TGCAAATCGATAAAACCCGC+CGG | - | chr6_4:9045346-9045365 | None:intergenic | 45.0% | |
| !! | TGTTGGTGATGAGGTGAAGA+AGG | + | chr6_4:9045407-9045426 | Msa0975300:CDS | 45.0% |
| AAAGGCGGTAAAGATGGTGT+TGG | + | chr6_4:9045501-9045520 | Msa0975300:CDS | 45.0% | |
| AAGGCGGTAAAGATGGTGTT+GGG | + | chr6_4:9045502-9045521 | Msa0975300:CDS | 45.0% | |
| ! | AAGATGGTGTTGGGAGGAAT+AGG | + | chr6_4:9045511-9045530 | Msa0975300:CDS | 45.0% |
| ! | AGATGGTGTTGGGAGGAATA+GGG | + | chr6_4:9045512-9045531 | Msa0975300:CDS | 45.0% |
| ACAAGACTCCGTCGATAGTA+AGG | + | chr6_4:9045563-9045582 | Msa0975300:CDS | 45.0% | |
| TAAGGAGAGTTTGAGTGAGG+AGG | + | chr6_4:9045581-9045600 | Msa0975300:CDS | 45.0% | |
| TTGGTTTCAAGACATGGCGT+AGG | + | chr6_4:9045690-9045709 | Msa0975300:CDS | 45.0% | |
| AGAGCTATGTGGAAGATCAC+TGG | + | chr6_4:9045798-9045817 | Msa0975300:CDS | 45.0% | |
| ! | GATCACTGGTTGCAGCATAA+TGG | + | chr6_4:9045812-9045831 | Msa0975300:CDS | 45.0% |
| GATGGATGACGTTGTTGAAG+AGG | + | chr6_4:9045965-9045984 | Msa0975300:CDS | 45.0% | |
| GATGACGTTGTTGAAGAGGT+TGG | + | chr6_4:9045969-9045988 | Msa0975300:CDS | 45.0% | |
| TGACGTTGTTGAAGAGGTTG+GGG | + | chr6_4:9045971-9045990 | Msa0975300:CDS | 45.0% | |
| !! | TGTTGATGGCGAAAAGGACT+AGG | + | chr6_4:9046054-9046073 | Msa0975300:CDS | 45.0% |
| CGAAAAGGACTAGGCTGTAT+TGG | + | chr6_4:9046063-9046082 | Msa0975300:CDS | 45.0% | |
| CCAATGCAATGTGTTGCACA+AGG | - | chr6_4:9046092-9046111 | None:intergenic | 45.0% | |
| CCTTGTGCAACACATTGCAT+TGG | + | chr6_4:9046089-9046108 | Msa0975300:CDS | 45.0% | |
| GAATGATGCTGCAACACTGT+GGG | + | chr6_4:9046111-9046130 | Msa0975300:CDS | 45.0% | |
| AATGATGCTGCAACACTGTG+GGG | + | chr6_4:9046112-9046131 | Msa0975300:CDS | 45.0% | |
| GAGTTCGCAAAGACGATGAA+TGG | + | chr6_4:9046359-9046378 | Msa0975300:CDS | 45.0% | |
| ! | AGGATGCGGTTTTGCACAAA+AGG | + | chr6_4:9046393-9046412 | Msa0975300:CDS | 45.0% |
| GGCAATGGTGAAAGCTATAG+AGG | + | chr6_4:9046520-9046539 | Msa0975300:CDS | 45.0% | |
| GGCAAATCATTGGTGGAACA+TGG | + | chr6_4:9046711-9046730 | Msa0975300:CDS | 45.0% | |
| CCAGCAGTAATTACGGCTAT+TGG | - | chr6_4:9046932-9046951 | None:intergenic | 45.0% | |
| CCAATAGCCGTAATTACTGC+TGG | + | chr6_4:9046929-9046948 | Msa0975300:CDS | 45.0% | |
| CTCCTCACCAGCAGTAATTA+CGG | - | chr6_4:9046939-9046958 | None:intergenic | 45.0% | |
| AAAGATGCCCACCAAATTGG+TGG | - | chr6_4:9046965-9046984 | None:intergenic | 45.0% | |
| TGCTTGACAGGCAGTTCTTA+TGG | + | chr6_4:9047031-9047050 | Msa0975300:CDS | 45.0% | |
| GCTTGACAGGCAGTTCTTAT+GGG | + | chr6_4:9047032-9047051 | Msa0975300:CDS | 45.0% | |
| CTTGACAGGCAGTTCTTATG+GGG | + | chr6_4:9047033-9047052 | Msa0975300:CDS | 45.0% | |
| TTGACAGGCAGTTCTTATGG+GGG | + | chr6_4:9047034-9047053 | Msa0975300:CDS | 45.0% | |
| CTTATGGGGGTGAACGTAAT+CGG | + | chr6_4:9047047-9047066 | Msa0975300:CDS | 45.0% | |
| TGAACCTTCAACGTCTCCAT+TGG | - | chr6_4:9047287-9047306 | None:intergenic | 45.0% | |
| AGACGTTGAAGGTTCAGATG+TGG | + | chr6_4:9047291-9047310 | Msa0975300:CDS | 45.0% | |
| TCAGCTAGACACTTCAGACA+TGG | - | chr6_4:9047337-9047356 | None:intergenic | 45.0% | |
| ! | TCTGAAGTGTCTAGCTGATG+CGG | + | chr6_4:9047339-9047358 | Msa0975300:CDS | 45.0% |
| GATGACGATGGAGATGAAGA+TGG | + | chr6_4:9047415-9047434 | Msa0975300:CDS | 45.0% | |
| ! | GTGATAATGTTGTAACCGGC+GGG | + | chr6_4:9045328-9045347 | Msa0975300:CDS | 45.0% |
| TGCAAATCGATAAAACCCGC+CGG | - | chr6_4:9045346-9045365 | None:intergenic | 45.0% | |
| !! | TGTTGGTGATGAGGTGAAGA+AGG | + | chr6_4:9045407-9045426 | Msa0975300:CDS | 45.0% |
| AAAGGCGGTAAAGATGGTGT+TGG | + | chr6_4:9045501-9045520 | Msa0975300:CDS | 45.0% | |
| AAGGCGGTAAAGATGGTGTT+GGG | + | chr6_4:9045502-9045521 | Msa0975300:CDS | 45.0% | |
| ! | AAGATGGTGTTGGGAGGAAT+AGG | + | chr6_4:9045511-9045530 | Msa0975300:CDS | 45.0% |
| ! | AGATGGTGTTGGGAGGAATA+GGG | + | chr6_4:9045512-9045531 | Msa0975300:CDS | 45.0% |
| ACAAGACTCCGTCGATAGTA+AGG | + | chr6_4:9045563-9045582 | Msa0975300:CDS | 45.0% | |
| TAAGGAGAGTTTGAGTGAGG+AGG | + | chr6_4:9045581-9045600 | Msa0975300:CDS | 45.0% | |
| TTGGTTTCAAGACATGGCGT+AGG | + | chr6_4:9045690-9045709 | Msa0975300:CDS | 45.0% | |
| AGAGCTATGTGGAAGATCAC+TGG | + | chr6_4:9045798-9045817 | Msa0975300:CDS | 45.0% | |
| ! | GATCACTGGTTGCAGCATAA+TGG | + | chr6_4:9045812-9045831 | Msa0975300:CDS | 45.0% |
| GATGGATGACGTTGTTGAAG+AGG | + | chr6_4:9045965-9045984 | Msa0975300:CDS | 45.0% | |
| GATGACGTTGTTGAAGAGGT+TGG | + | chr6_4:9045969-9045988 | Msa0975300:CDS | 45.0% | |
| TGACGTTGTTGAAGAGGTTG+GGG | + | chr6_4:9045971-9045990 | Msa0975300:CDS | 45.0% | |
| !! | TGTTGATGGCGAAAAGGACT+AGG | + | chr6_4:9046054-9046073 | Msa0975300:CDS | 45.0% |
| CGAAAAGGACTAGGCTGTAT+TGG | + | chr6_4:9046063-9046082 | Msa0975300:CDS | 45.0% | |
| CCAATGCAATGTGTTGCACA+AGG | - | chr6_4:9046092-9046111 | None:intergenic | 45.0% | |
| CCTTGTGCAACACATTGCAT+TGG | + | chr6_4:9046089-9046108 | Msa0975300:CDS | 45.0% | |
| GAATGATGCTGCAACACTGT+GGG | + | chr6_4:9046111-9046130 | Msa0975300:CDS | 45.0% | |
| AATGATGCTGCAACACTGTG+GGG | + | chr6_4:9046112-9046131 | Msa0975300:CDS | 45.0% | |
| GAGTTCGCAAAGACGATGAA+TGG | + | chr6_4:9046359-9046378 | Msa0975300:CDS | 45.0% | |
| ! | AGGATGCGGTTTTGCACAAA+AGG | + | chr6_4:9046393-9046412 | Msa0975300:CDS | 45.0% |
| GGCAATGGTGAAAGCTATAG+AGG | + | chr6_4:9046520-9046539 | Msa0975300:CDS | 45.0% | |
| GGCAAATCATTGGTGGAACA+TGG | + | chr6_4:9046711-9046730 | Msa0975300:CDS | 45.0% | |
| CCAGCAGTAATTACGGCTAT+TGG | - | chr6_4:9046932-9046951 | None:intergenic | 45.0% | |
| CCAATAGCCGTAATTACTGC+TGG | + | chr6_4:9046929-9046948 | Msa0975300:CDS | 45.0% | |
| CTCCTCACCAGCAGTAATTA+CGG | - | chr6_4:9046939-9046958 | None:intergenic | 45.0% | |
| AAAGATGCCCACCAAATTGG+TGG | - | chr6_4:9046965-9046984 | None:intergenic | 45.0% | |
| TGCTTGACAGGCAGTTCTTA+TGG | + | chr6_4:9047031-9047050 | Msa0975300:CDS | 45.0% | |
| GCTTGACAGGCAGTTCTTAT+GGG | + | chr6_4:9047032-9047051 | Msa0975300:CDS | 45.0% | |
| CTTGACAGGCAGTTCTTATG+GGG | + | chr6_4:9047033-9047052 | Msa0975300:CDS | 45.0% | |
| TTGACAGGCAGTTCTTATGG+GGG | + | chr6_4:9047034-9047053 | Msa0975300:CDS | 45.0% | |
| CTTATGGGGGTGAACGTAAT+CGG | + | chr6_4:9047047-9047066 | Msa0975300:CDS | 45.0% | |
| TGAACCTTCAACGTCTCCAT+TGG | - | chr6_4:9047287-9047306 | None:intergenic | 45.0% | |
| AGACGTTGAAGGTTCAGATG+TGG | + | chr6_4:9047291-9047310 | Msa0975300:CDS | 45.0% | |
| TCAGCTAGACACTTCAGACA+TGG | - | chr6_4:9047337-9047356 | None:intergenic | 45.0% | |
| ! | TCTGAAGTGTCTAGCTGATG+CGG | + | chr6_4:9047339-9047358 | Msa0975300:CDS | 45.0% |
| GATGACGATGGAGATGAAGA+TGG | + | chr6_4:9047415-9047434 | Msa0975300:CDS | 45.0% | |
| ! | GTTGAAGCTTGTGAGGGTGT+TGG | + | chr6_4:9045390-9045409 | Msa0975300:CDS | 50.0% |
| !! | TTGTGAGGGTGTTGGTGATG+AGG | + | chr6_4:9045398-9045417 | Msa0975300:CDS | 50.0% |
| ! | GAGGAAGGGTATGTTGGAGT+AGG | + | chr6_4:9045468-9045487 | Msa0975300:CDS | 50.0% |
| CATACTATGTAGCTGCCGCT+GGG | + | chr6_4:9046030-9046049 | Msa0975300:CDS | 50.0% | |
| TTTCGCCATCAACATCCCAG+CGG | - | chr6_4:9046048-9046067 | None:intergenic | 50.0% | |
| !! | CTGGGATGTTGATGGCGAAA+AGG | + | chr6_4:9046048-9046067 | Msa0975300:CDS | 50.0% |
| GGAATGATGCTGCAACACTG+TGG | + | chr6_4:9046110-9046129 | Msa0975300:CDS | 50.0% | |
| AGCCGTAATTACTGCTGGTG+AGG | + | chr6_4:9046934-9046953 | Msa0975300:CDS | 50.0% | |
| GTGAGGAGACTCCACCAATT+TGG | + | chr6_4:9046951-9046970 | Msa0975300:CDS | 50.0% | |
| AGGAGACTCCACCAATTTGG+TGG | + | chr6_4:9046954-9046973 | Msa0975300:CDS | 50.0% | |
| GGAGACTCCACCAATTTGGT+GGG | + | chr6_4:9046955-9046974 | Msa0975300:CDS | 50.0% | |
| GCGAAAGATGCCCACCAAAT+TGG | - | chr6_4:9046968-9046987 | None:intergenic | 50.0% | |
| TAATCGGAAGGCCTTCGAGA+TGG | + | chr6_4:9047063-9047082 | Msa0975300:CDS | 50.0% | |
| GATGCCAATGGAGACGTTGA+AGG | + | chr6_4:9047280-9047299 | Msa0975300:CDS | 50.0% | |
| AGGTTCAGATGTGGATGCCT+CGG | + | chr6_4:9047300-9047319 | Msa0975300:CDS | 50.0% | |
| AGATGTGGATGCCTCGGATT+CGG | + | chr6_4:9047306-9047325 | Msa0975300:CDS | 50.0% | |
| ! | CTGAAGTGTCTAGCTGATGC+GGG | + | chr6_4:9047340-9047359 | Msa0975300:CDS | 50.0% |
| ! | TGAAGTGTCTAGCTGATGCG+GGG | + | chr6_4:9047341-9047360 | Msa0975300:CDS | 50.0% |
| ! | GTTGAAGCTTGTGAGGGTGT+TGG | + | chr6_4:9045390-9045409 | Msa0975300:CDS | 50.0% |
| !! | TTGTGAGGGTGTTGGTGATG+AGG | + | chr6_4:9045398-9045417 | Msa0975300:CDS | 50.0% |
| ! | GAGGAAGGGTATGTTGGAGT+AGG | + | chr6_4:9045468-9045487 | Msa0975300:CDS | 50.0% |
| CATACTATGTAGCTGCCGCT+GGG | + | chr6_4:9046030-9046049 | Msa0975300:CDS | 50.0% | |
| TTTCGCCATCAACATCCCAG+CGG | - | chr6_4:9046048-9046067 | None:intergenic | 50.0% | |
| !! | CTGGGATGTTGATGGCGAAA+AGG | + | chr6_4:9046048-9046067 | Msa0975300:CDS | 50.0% |
| GGAATGATGCTGCAACACTG+TGG | + | chr6_4:9046110-9046129 | Msa0975300:CDS | 50.0% | |
| AGCCGTAATTACTGCTGGTG+AGG | + | chr6_4:9046934-9046953 | Msa0975300:CDS | 50.0% | |
| GTGAGGAGACTCCACCAATT+TGG | + | chr6_4:9046951-9046970 | Msa0975300:CDS | 50.0% | |
| AGGAGACTCCACCAATTTGG+TGG | + | chr6_4:9046954-9046973 | Msa0975300:CDS | 50.0% | |
| GGAGACTCCACCAATTTGGT+GGG | + | chr6_4:9046955-9046974 | Msa0975300:CDS | 50.0% | |
| GCGAAAGATGCCCACCAAAT+TGG | - | chr6_4:9046968-9046987 | None:intergenic | 50.0% | |
| TAATCGGAAGGCCTTCGAGA+TGG | + | chr6_4:9047063-9047082 | Msa0975300:CDS | 50.0% | |
| GATGCCAATGGAGACGTTGA+AGG | + | chr6_4:9047280-9047299 | Msa0975300:CDS | 50.0% | |
| AGGTTCAGATGTGGATGCCT+CGG | + | chr6_4:9047300-9047319 | Msa0975300:CDS | 50.0% | |
| AGATGTGGATGCCTCGGATT+CGG | + | chr6_4:9047306-9047325 | Msa0975300:CDS | 50.0% | |
| ! | CTGAAGTGTCTAGCTGATGC+GGG | + | chr6_4:9047340-9047359 | Msa0975300:CDS | 50.0% |
| ! | TGAAGTGTCTAGCTGATGCG+GGG | + | chr6_4:9047341-9047360 | Msa0975300:CDS | 50.0% |
| ! | GCGGTAAAGATGGTGTTGGG+AGG | + | chr6_4:9045505-9045524 | Msa0975300:CDS | 55.0% |
| CCAGCGGCAGCTACATAGTA+TGG | - | chr6_4:9046032-9046051 | None:intergenic | 55.0% | |
| CCATACTATGTAGCTGCCGC+TGG | + | chr6_4:9046029-9046048 | Msa0975300:CDS | 55.0% | |
| CATCGTCTTTGCGAACTCGC+TGG | - | chr6_4:9046357-9046376 | None:intergenic | 55.0% | |
| CTGCAGCATGCAAAGGGCAA+TGG | - | chr6_4:9046739-9046758 | None:intergenic | 55.0% | |
| CATTGCCCTTTGCATGCTGC+AGG | + | chr6_4:9046737-9046756 | Msa0975300:CDS | 55.0% | |
| TGGGGGTGAACGTAATCGGA+AGG | + | chr6_4:9047051-9047070 | Msa0975300:CDS | 55.0% | |
| ACATGGCGTATCCGAATCCG+AGG | - | chr6_4:9047320-9047339 | None:intergenic | 55.0% | |
| ! | GCGGTAAAGATGGTGTTGGG+AGG | + | chr6_4:9045505-9045524 | Msa0975300:CDS | 55.0% |
| CCAGCGGCAGCTACATAGTA+TGG | - | chr6_4:9046032-9046051 | None:intergenic | 55.0% | |
| CCATACTATGTAGCTGCCGC+TGG | + | chr6_4:9046029-9046048 | Msa0975300:CDS | 55.0% | |
| CATCGTCTTTGCGAACTCGC+TGG | - | chr6_4:9046357-9046376 | None:intergenic | 55.0% | |
| CTGCAGCATGCAAAGGGCAA+TGG | - | chr6_4:9046739-9046758 | None:intergenic | 55.0% | |
| CATTGCCCTTTGCATGCTGC+AGG | + | chr6_4:9046737-9046756 | Msa0975300:CDS | 55.0% | |
| TGGGGGTGAACGTAATCGGA+AGG | + | chr6_4:9047051-9047070 | Msa0975300:CDS | 55.0% | |
| ACATGGCGTATCCGAATCCG+AGG | - | chr6_4:9047320-9047339 | None:intergenic | 55.0% | |
| ! | GAGTGAGGAGGCATGTCGAG+CGG | + | chr6_4:9045593-9045612 | Msa0975300:CDS | 60.0% |
| AGGCATGTCGAGCGGTTGCA+AGG | + | chr6_4:9045601-9045620 | Msa0975300:CDS | 60.0% | |
| AGCTGCCGCTGGGATGTTGA+TGG | + | chr6_4:9046040-9046059 | Msa0975300:CDS | 60.0% | |
| CTCGCTGGACTTCCACTCCT+TGG | - | chr6_4:9046342-9046361 | None:intergenic | 60.0% | |
| ! | GAGTGAGGAGGCATGTCGAG+CGG | + | chr6_4:9045593-9045612 | Msa0975300:CDS | 60.0% |
| AGGCATGTCGAGCGGTTGCA+AGG | + | chr6_4:9045601-9045620 | Msa0975300:CDS | 60.0% | |
| AGCTGCCGCTGGGATGTTGA+TGG | + | chr6_4:9046040-9046059 | Msa0975300:CDS | 60.0% | |
| CTCGCTGGACTTCCACTCCT+TGG | - | chr6_4:9046342-9046361 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 9045222 | 9047637 | 9045222 | ID=Msa0975300;Name=Msa0975300 |
| chr6_4 | mRNA | 9045222 | 9047637 | 9045222 | ID=Msa0975300-mRNA-1;Parent=Msa0975300;Name=Msa0975300-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|0.5|0.33|0.66|1|1|3|169|682 |
| chr6_4 | exon | 9045222 | 9046585 | 9045222 | ID=Msa0975300-mRNA-1:exon:3236;Parent=Msa0975300-mRNA-1 |
| chr6_4 | exon | 9046697 | 9047084 | 9046697 | ID=Msa0975300-mRNA-1:exon:3237;Parent=Msa0975300-mRNA-1 |
| chr6_4 | exon | 9047172 | 9047637 | 9047172 | ID=Msa0975300-mRNA-1:exon:3238;Parent=Msa0975300-mRNA-1 |
| chr6_4 | CDS | 9045222 | 9046585 | 9045222 | ID=Msa0975300-mRNA-1:cds;Parent=Msa0975300-mRNA-1 |
| chr6_4 | CDS | 9046697 | 9047084 | 9046697 | ID=Msa0975300-mRNA-1:cds;Parent=Msa0975300-mRNA-1 |
| chr6_4 | CDS | 9047172 | 9047468 | 9047172 | ID=Msa0975300-mRNA-1:cds;Parent=Msa0975300-mRNA-1 |
| chr6_4 | three_prime_UTR | 9047469 | 9047637 | 9047469 | ID=Msa0975300-mRNA-1:three_prime_utr;Parent=Msa0975300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
