Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1396030 | XP_003624821.1 | 95.252 | 337 | 16 | 0 | 1 | 337 | 1 | 337 | 0.0 | 607 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1396030 | G7L3Q5 | 95.252 | 337 | 16 | 0 | 1 | 337 | 1 | 337 | 0.0 | 607 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1396030 | 0.802490 | 5.472824e-49 | -8.615850e-47 |
| Msa0005890 | Msa1396030 | 0.841871 | 3.654098e-58 | -8.615850e-47 |
| Msa0018160 | Msa1396030 | 0.819367 | 1.205623e-52 | -8.615850e-47 |
| Msa0021500 | Msa1396030 | 0.816266 | 6.042177e-52 | -8.615850e-47 |
| Msa0025580 | Msa1396030 | 0.816489 | 5.385623e-52 | -8.615850e-47 |
| Msa0027280 | Msa1396030 | 0.812975 | 3.235212e-51 | -8.615850e-47 |
| Msa0028420 | Msa1396030 | 0.841810 | 3.790722e-58 | -8.615850e-47 |
| Msa0030370 | Msa1396030 | 0.800559 | 1.361853e-48 | -8.615850e-47 |
| Msa0036870 | Msa1396030 | 0.808226 | 3.437504e-50 | -8.615850e-47 |
| Msa0048510 | Msa1396030 | 0.805853 | 1.092455e-49 | -8.615850e-47 |
| Msa0052480 | Msa1396030 | 0.808975 | 2.378007e-50 | -8.615850e-47 |
| Msa0054690 | Msa1396030 | 0.829799 | 4.206028e-55 | -8.615850e-47 |
| Msa0067330 | Msa1396030 | 0.802977 | 4.341687e-49 | -8.615850e-47 |
| Msa0073120 | Msa1396030 | 0.802174 | 6.357560e-49 | -8.615850e-47 |
| Msa0081520 | Msa1396030 | 0.829090 | 6.251968e-55 | -8.615850e-47 |
| Msa0089630 | Msa1396030 | 0.813894 | 2.031331e-51 | -8.615850e-47 |
| Msa0090400 | Msa1396030 | 0.836232 | 1.055546e-56 | -8.615850e-47 |
| Msa0092790 | Msa1396030 | 0.821982 | 3.022397e-53 | -8.615850e-47 |
| Msa0094780 | Msa1396030 | 0.807485 | 4.940448e-50 | -8.615850e-47 |
| Msa1346280 | Msa1396030 | 0.808064 | 3.721262e-50 | -8.615850e-47 |
| Msa1356830 | Msa1396030 | 0.812245 | 4.670645e-51 | -8.615850e-47 |
| Msa1359690 | Msa1396030 | 0.827608 | 1.424573e-54 | -8.615850e-47 |
| Msa1372230 | Msa1396030 | 0.824655 | 7.174019e-54 | -8.615850e-47 |
| Msa1390440 | Msa1396030 | 0.802490 | 5.474007e-49 | -8.615850e-47 |
| Msa1396030 | Msa1397400 | 0.802760 | 4.814490e-49 | -8.615850e-47 |
| Msa1396030 | Msa1437930 | 0.804964 | 1.677556e-49 | -8.615850e-47 |
| Msa1396030 | Msa1437940 | 0.804610 | 1.988530e-49 | -8.615850e-47 |
| Msa1396030 | Msa1446810 | 0.800217 | 1.598595e-48 | -8.615850e-47 |
| Msa1396030 | Msa1446820 | 0.807181 | 5.730921e-50 | -8.615850e-47 |
| Msa1396030 | Msa1449480 | 0.808029 | 3.785442e-50 | -8.615850e-47 |
| Msa1396030 | Msa1454140 | 0.810657 | 1.033829e-50 | -8.615850e-47 |
| Msa1396030 | Msa1465440 | 0.822080 | 2.868392e-53 | -8.615850e-47 |
| Msa0624900 | Msa1396030 | 0.807610 | 4.647577e-50 | -8.615850e-47 |
| Msa0626450 | Msa1396030 | 0.811345 | 7.333905e-51 | -8.615850e-47 |
| Msa0626490 | Msa1396030 | 0.809501 | 1.833773e-50 | -8.615850e-47 |
| Msa0644410 | Msa1396030 | 0.815686 | 8.138893e-52 | -8.615850e-47 |
| Msa0658640 | Msa1396030 | 0.846629 | 1.926026e-59 | -8.615850e-47 |
| Msa0661150 | Msa1396030 | 0.827821 | 1.265543e-54 | -8.615850e-47 |
| Msa0664600 | Msa1396030 | 0.806285 | 8.860420e-50 | -8.615850e-47 |
| Msa0679870 | Msa1396030 | 0.804424 | 2.174295e-49 | -8.615850e-47 |
| Msa0683570 | Msa1396030 | 0.818736 | 1.677292e-52 | -8.615850e-47 |
| Msa0697160 | Msa1396030 | 0.810922 | 9.059423e-51 | -8.615850e-47 |
| Msa0703600 | Msa1396030 | 0.821726 | 3.463898e-53 | -8.615850e-47 |
| Msa0709200 | Msa1396030 | 0.822228 | 2.650761e-53 | -8.615850e-47 |
| Msa0721080 | Msa1396030 | 0.809549 | 1.790707e-50 | -8.615850e-47 |
| Msa0730430 | Msa1396030 | 0.807898 | 4.035583e-50 | -8.615850e-47 |
| Msa0735780 | Msa1396030 | 0.814328 | 1.629211e-51 | -8.615850e-47 |
| Msa0741220 | Msa1396030 | 0.812693 | 3.728412e-51 | -8.615850e-47 |
| Msa0742740 | Msa1396030 | 0.803561 | 3.286919e-49 | -8.615850e-47 |
| Msa0754520 | Msa1396030 | 0.804733 | 1.874742e-49 | -8.615850e-47 |
| Msa0765240 | Msa1396030 | 0.808899 | 2.468881e-50 | -8.615850e-47 |
| Msa0768990 | Msa1396030 | 0.840233 | 9.834785e-58 | -8.615850e-47 |
| Msa0773630 | Msa1396030 | 0.807140 | 5.844784e-50 | -8.615850e-47 |
| Msa0777750 | Msa1396030 | 0.821237 | 4.492153e-53 | -8.615850e-47 |
| Msa0780270 | Msa1396030 | 0.817723 | 2.843813e-52 | -8.615850e-47 |
| Msa0795870 | Msa1396030 | 0.863308 | 2.731979e-64 | -8.615850e-47 |
| Msa0815920 | Msa1396030 | 0.832548 | 8.876925e-56 | -8.615850e-47 |
| Msa0819170 | Msa1396030 | 0.825487 | 4.563950e-54 | -8.615850e-47 |
| Msa0823820 | Msa1396030 | 0.806174 | 9.349996e-50 | -8.615850e-47 |
| Msa0824450 | Msa1396030 | 0.828989 | 6.613941e-55 | -8.615850e-47 |
| Msa0833220 | Msa1396030 | 0.811927 | 5.479077e-51 | -8.615850e-47 |
| Msa0833650 | Msa1396030 | 0.858075 | 1.056603e-62 | -8.615850e-47 |
| Msa0835490 | Msa1396030 | 0.812763 | 3.598780e-51 | -8.615850e-47 |
| Msa0121330 | Msa1396030 | 0.807955 | 3.925505e-50 | -8.615850e-47 |
| Msa0125550 | Msa1396030 | 0.804287 | 2.322628e-49 | -8.615850e-47 |
| Msa0136650 | Msa1396030 | 0.823106 | 1.655796e-53 | -8.615850e-47 |
| Msa0137880 | Msa1396030 | 0.827440 | 1.562894e-54 | -8.615850e-47 |
| Msa0140280 | Msa1396030 | 0.819601 | 1.066107e-52 | -8.615850e-47 |
| Msa0146040 | Msa1396030 | 0.827315 | 1.674566e-54 | -8.615850e-47 |
| Msa0160860 | Msa1396030 | 0.806316 | 8.729519e-50 | -8.615850e-47 |
| Msa0168500 | Msa1396030 | 0.811022 | 8.618790e-51 | -8.615850e-47 |
| Msa0173730 | Msa1396030 | 0.811304 | 7.485292e-51 | -8.615850e-47 |
| Msa0174450 | Msa1396030 | 0.812419 | 4.281292e-51 | -8.615850e-47 |
| Msa0178560 | Msa1396030 | 0.821645 | 3.616481e-53 | -8.615850e-47 |
| Msa0182190 | Msa1396030 | 0.828769 | 7.476241e-55 | -8.615850e-47 |
| Msa0182240 | Msa1396030 | 0.821694 | 3.522772e-53 | -8.615850e-47 |
| Msa0190570 | Msa1396030 | 0.829753 | 4.314285e-55 | -8.615850e-47 |
| Msa0200050 | Msa1396030 | 0.803857 | 2.854023e-49 | -8.615850e-47 |
| Msa0223080 | Msa1396030 | 0.805641 | 1.210237e-49 | -8.615850e-47 |
| Msa0225860 | Msa1396030 | 0.838861 | 2.235361e-57 | -8.615850e-47 |
| Msa1224930 | Msa1396030 | 0.810096 | 1.366361e-50 | -8.615850e-47 |
| Msa1226520 | Msa1396030 | 0.848751 | 5.021245e-60 | -8.615850e-47 |
| Msa1236410 | Msa1396030 | 0.814732 | 1.326302e-51 | -8.615850e-47 |
| Msa1269480 | Msa1396030 | 0.802943 | 4.412530e-49 | -8.615850e-47 |
| Msa1277150 | Msa1396030 | 0.810508 | 1.113084e-50 | -8.615850e-47 |
| Msa1298220 | Msa1396030 | 0.803885 | 2.815791e-49 | -8.615850e-47 |
| Msa1320670 | Msa1396030 | 0.801855 | 7.394687e-49 | -8.615850e-47 |
| Msa1343170 | Msa1396030 | 0.807852 | 4.127327e-50 | -8.615850e-47 |
| Msa1343180 | Msa1396030 | 0.834530 | 2.841562e-56 | -8.615850e-47 |
| Msa0369790 | Msa1396030 | 0.840311 | 9.384355e-58 | -8.615850e-47 |
| Msa0371030 | Msa1396030 | 0.820676 | 6.047860e-53 | -8.615850e-47 |
| Msa0378720 | Msa1396030 | 0.805656 | 1.201518e-49 | -8.615850e-47 |
| Msa0380620 | Msa1396030 | 0.824786 | 6.683347e-54 | -8.615850e-47 |
| Msa0380670 | Msa1396030 | 0.810474 | 1.132447e-50 | -8.615850e-47 |
| Msa0405710 | Msa1396030 | 0.809173 | 2.156930e-50 | -8.615850e-47 |
| Msa0422050 | Msa1396030 | 0.805879 | 1.078718e-49 | -8.615850e-47 |
| Msa0430260 | Msa1396030 | 0.824077 | 9.810941e-54 | -8.615850e-47 |
| Msa0430300 | Msa1396030 | 0.818801 | 1.621526e-52 | -8.615850e-47 |
| Msa0440500 | Msa1396030 | 0.839130 | 1.904379e-57 | -8.615850e-47 |
| Msa0443310 | Msa1396030 | 0.838354 | 3.023561e-57 | -8.615850e-47 |
| Msa0464000 | Msa1396030 | 0.836146 | 1.110431e-56 | -8.615850e-47 |
| Msa0474730 | Msa1396030 | 0.805912 | 1.061356e-49 | -8.615850e-47 |
| Msa0476650 | Msa1396030 | 0.806313 | 8.738609e-50 | -8.615850e-47 |
| Msa0997920 | Msa1396030 | 0.803077 | 4.140346e-49 | -8.615850e-47 |
| Msa1011530 | Msa1396030 | 0.810160 | 1.323089e-50 | -8.615850e-47 |
| Msa1019430 | Msa1396030 | 0.800255 | 1.570131e-48 | -8.615850e-47 |
| Msa1020480 | Msa1396030 | 0.800724 | 1.260373e-48 | -8.615850e-47 |
| Msa1028100 | Msa1396030 | 0.804127 | 2.507609e-49 | -8.615850e-47 |
| Msa1042160 | Msa1396030 | 0.830222 | 3.316923e-55 | -8.615850e-47 |
| Msa1042190 | Msa1396030 | 0.824769 | 6.746435e-54 | -8.615850e-47 |
| Msa1045140 | Msa1396030 | 0.854808 | 9.616831e-62 | -8.615850e-47 |
| Msa1075520 | Msa1396030 | 0.804867 | 1.757643e-49 | -8.615850e-47 |
| Msa1081390 | Msa1396030 | 0.800152 | 1.647598e-48 | -8.615850e-47 |
| Msa1084960 | Msa1396030 | 0.808358 | 3.220897e-50 | -8.615850e-47 |
| Msa1094010 | Msa1396030 | 0.808570 | 2.902083e-50 | -8.615850e-47 |
| Msa1103990 | Msa1396030 | 0.831366 | 1.738450e-55 | -8.615850e-47 |
| Msa0255090 | Msa1396030 | 0.806789 | 6.936833e-50 | -8.615850e-47 |
| Msa0259380 | Msa1396030 | 0.800903 | 1.158454e-48 | -8.615850e-47 |
| Msa0262250 | Msa1396030 | 0.800864 | 1.180088e-48 | -8.615850e-47 |
| Msa0267110 | Msa1396030 | 0.835309 | 1.808556e-56 | -8.615850e-47 |
| Msa0292400 | Msa1396030 | 0.808817 | 2.570909e-50 | -8.615850e-47 |
| Msa0298470 | Msa1396030 | 0.827551 | 1.469833e-54 | -8.615850e-47 |
| Msa0298500 | Msa1396030 | 0.811723 | 6.069890e-51 | -8.615850e-47 |
| Msa0302160 | Msa1396030 | 0.801594 | 8.365086e-49 | -8.615850e-47 |
| Msa0307770 | Msa1396030 | 0.813622 | 2.331835e-51 | -8.615850e-47 |
| Msa0310850 | Msa1396030 | 0.804013 | 2.648710e-49 | -8.615850e-47 |
| Msa0330380 | Msa1396030 | 0.821716 | 3.483229e-53 | -8.615850e-47 |
| Msa0337700 | Msa1396030 | 0.811268 | 7.620047e-51 | -8.615850e-47 |
| Msa0339490 | Msa1396030 | 0.803807 | 2.921989e-49 | -8.615850e-47 |
| Msa0339500 | Msa1396030 | 0.829511 | 4.940602e-55 | -8.615850e-47 |
| Msa0340500 | Msa1396030 | 0.830050 | 3.652655e-55 | -8.615850e-47 |
| Msa0348880 | Msa1396030 | 0.804238 | 2.377640e-49 | -8.615850e-47 |
| Msa1113340 | Msa1396030 | 0.818048 | 2.402206e-52 | -8.615850e-47 |
| Msa1116220 | Msa1396030 | 0.801034 | 1.089120e-48 | -8.615850e-47 |
| Msa1117920 | Msa1396030 | 0.859994 | 2.812847e-63 | -8.615850e-47 |
| Msa1132530 | Msa1396030 | 0.802626 | 5.130661e-49 | -8.615850e-47 |
| Msa1132840 | Msa1396030 | 0.853752 | 1.941901e-61 | -8.615850e-47 |
| Msa1157870 | Msa1396030 | 0.827061 | 1.926390e-54 | -8.615850e-47 |
| Msa1161680 | Msa1396030 | 0.867517 | 1.291066e-65 | -8.615850e-47 |
| Msa1167470 | Msa1396030 | 0.821047 | 4.968934e-53 | -8.615850e-47 |
| Msa1177320 | Msa1396030 | 0.823168 | 1.601750e-53 | -8.615850e-47 |
| Msa1186020 | Msa1396030 | 0.814463 | 1.521324e-51 | -8.615850e-47 |
| Msa1200890 | Msa1396030 | 0.834505 | 2.882492e-56 | -8.615850e-47 |
| Msa1215870 | Msa1396030 | 0.832872 | 7.377747e-56 | -8.615850e-47 |
| Msa0483100 | Msa1396030 | 0.800760 | 1.239129e-48 | -8.615850e-47 |
| Msa0484380 | Msa1396030 | 0.803109 | 4.077780e-49 | -8.615850e-47 |
| Msa0500380 | Msa1396030 | 0.813013 | 3.173032e-51 | -8.615850e-47 |
| Msa0509550 | Msa1396030 | 0.842709 | 2.190825e-58 | -8.615850e-47 |
| Msa0530780 | Msa1396030 | 0.853975 | 1.674259e-61 | -8.615850e-47 |
| Msa0548470 | Msa1396030 | 0.818535 | 1.863561e-52 | -8.615850e-47 |
| Msa0557460 | Msa1396030 | 0.802131 | 6.489950e-49 | -8.615850e-47 |
| Msa0567170 | Msa1396030 | 0.839393 | 1.627447e-57 | -8.615850e-47 |
| Msa0569200 | Msa1396030 | 0.812650 | 3.810184e-51 | -8.615850e-47 |
| Msa0580370 | Msa1396030 | 0.855255 | 7.130848e-62 | -8.615850e-47 |
| Msa0583830 | Msa1396030 | 0.826979 | 2.014566e-54 | -8.615850e-47 |
| Msa0597790 | Msa1396030 | 0.829690 | 4.470235e-55 | -8.615850e-47 |
| Msa0861510 | Msa1396030 | 0.801909 | 7.207010e-49 | -8.615850e-47 |
| Msa0861600 | Msa1396030 | 0.806595 | 7.621365e-50 | -8.615850e-47 |
| Msa0861850 | Msa1396030 | 0.801741 | 7.805354e-49 | -8.615850e-47 |
| Msa0863010 | Msa1396030 | 0.808016 | 3.810267e-50 | -8.615850e-47 |
| Msa0903070 | Msa1396030 | 0.813664 | 2.282502e-51 | -8.615850e-47 |
| Msa0915520 | Msa1396030 | 0.802438 | 5.609350e-49 | -8.615850e-47 |
| Msa0945110 | Msa1396030 | 0.837971 | 3.792725e-57 | -8.615850e-47 |
| Msa0969200 | Msa1396030 | 0.801470 | 8.868275e-49 | -8.615850e-47 |
| Msa0975300 | Msa1396030 | 0.801743 | 7.797540e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1396030 | MtrunA17_Chr7g0254901 | 95.252 | 337 | 16 | 0 | 1 | 337 | 1 | 337 | 0.0 | 607 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1396030 | AT3G56810.1 | 28.340 | 247 | 133 | 5 | 133 | 337 | 88 | 332 | 1.78e-15 | 76.6 |
Find 98 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAGATTGTTAGAGAATT+AGG | 0.198743 | tig0021982:+51084 | Msa1396030:CDS |
| GAAGCAGAGTCTTCTCTTAC+AGG | 0.271350 | tig0021982:-51133 | None:intergenic |
| TGGCGACCGGAGTGACAATT+TGG | 0.295248 | tig0021982:-47529 | None:intergenic |
| TAGACAAATACACAAGTATA+AGG | 0.307460 | tig0021982:-51226 | None:intergenic |
| TCTCTTATGAAAGTGAGTTT+TGG | 0.316516 | tig0021982:-46770 | None:intergenic |
| GGCGGTGGAAACTTGATTCT+TGG | 0.321605 | tig0021982:-47047 | None:intergenic |
| AATAGAGAGCTTGGAAGAAT+AGG | 0.342378 | tig0021982:+51024 | Msa1396030:CDS |
| AAGAATAGGATTAGCTTTGC+AGG | 0.354347 | tig0021982:+51038 | Msa1396030:CDS |
| CTGTTGATTTCTTCCTCTCC+TGG | 0.358296 | tig0021982:-50862 | None:intergenic |
| ACGGCGGTGGCGACGGGAAT+GGG | 0.366982 | tig0021982:-46915 | None:intergenic |
| CACCGCCGTTTCCTCACCTT+CGG | 0.383644 | tig0021982:+46929 | Msa1396030:CDS |
| GACGTCGACGGAACGAGTTC+AGG | 0.389376 | tig0021982:-47391 | None:intergenic |
| AAGACAATTGGCTGCATGTC+CGG | 0.397778 | tig0021982:+46869 | Msa1396030:CDS |
| CAAATTAGCGGTGGCGGTGG+CGG | 0.402329 | tig0021982:-47065 | None:intergenic |
| CAAATTACATTGGATTTAGC+TGG | 0.408644 | tig0021982:+51250 | Msa1396030:three_prime_UTR |
| GATGGGACTGGAATCGCTTC+CGG | 0.413899 | tig0021982:+47261 | Msa1396030:CDS |
| GAGGAAACGGCGGTGGCGAC+GGG | 0.416323 | tig0021982:-46921 | None:intergenic |
| AAAATTCACGTCAAGACAAT+TGG | 0.426627 | tig0021982:+46857 | Msa1396030:CDS |
| TCCGAGGAGTCCGACTTTAC+CGG | 0.432538 | tig0021982:+47165 | Msa1396030:CDS |
| ATTAGCGGTGGCGGTGGCGG+TGG | 0.433916 | tig0021982:-47062 | None:intergenic |
| ACATTCTCCGATGACTTCCT+TGG | 0.436487 | tig0021982:-47208 | None:intergenic |
| TCCGTCGACGTCGCCGGCGG+TGG | 0.446605 | tig0021982:+47402 | Msa1396030:CDS |
| CGGTGTCGCCGTCGTCTTCA+CGG | 0.447900 | tig0021982:+46816 | Msa1396030:CDS |
| GTGGCGACGGGAATGGGAAG+TGG | 0.450763 | tig0021982:-46909 | None:intergenic |
| GAGATGCGACGAGGATCTTA+AGG | 0.450799 | tig0021982:+47336 | Msa1396030:CDS |
| AGTGTGTAGGGATGTTGCTT+GGG | 0.459394 | tig0021982:+50996 | Msa1396030:CDS |
| CTTTGCAGGATTGTATATGC+AGG | 0.473468 | tig0021982:+51052 | Msa1396030:CDS |
| AAGTGTAGATGAAGTGTGTA+GGG | 0.475361 | tig0021982:+50984 | Msa1396030:CDS |
| AACGGCGGTGGCGACGGGAA+TGG | 0.477789 | tig0021982:-46916 | None:intergenic |
| TGAGGAAACGGCGGTGGCGA+CGG | 0.479748 | tig0021982:-46922 | None:intergenic |
| CTCTGCTTCTGAACTATACA+TGG | 0.482592 | tig0021982:+51147 | Msa1396030:exon |
| ACACAGGACTCGGCTGTTGT+TGG | 0.485477 | tig0021982:-47471 | None:intergenic |
| GAAGTGTAGATGAAGTGTGT+AGG | 0.487123 | tig0021982:+50983 | Msa1396030:CDS |
| GAGAAGAGACAGAAGCTGCT+TGG | 0.490693 | tig0021982:+47304 | Msa1396030:CDS |
| AGACAAATACACAAGTATAA+GGG | 0.494714 | tig0021982:-51225 | None:intergenic |
| AGTAGCGAGGCTGATGGGAC+TGG | 0.494740 | tig0021982:+47249 | Msa1396030:CDS |
| TGGGGAGAAAATAGAGAGCT+TGG | 0.497438 | tig0021982:+51015 | Msa1396030:CDS |
| GGAATCGCTTCCGGCTTCAC+CGG | 0.497820 | tig0021982:+47270 | Msa1396030:CDS |
| ACTCGTTCCGTCGACGTCGC+CGG | 0.499621 | tig0021982:+47396 | Msa1396030:CDS |
| AAGTGTGTAGGGATGTTGCT+TGG | 0.504474 | tig0021982:+50995 | Msa1396030:CDS |
| TGGCAAATTAGCGGTGGCGG+TGG | 0.505482 | tig0021982:-47068 | None:intergenic |
| ACAACTGACTCCGGTGAAGC+CGG | 0.506123 | tig0021982:-47280 | None:intergenic |
| GGCTTCACCGGAGTCAGTTG+TGG | 0.509279 | tig0021982:+47282 | Msa1396030:CDS |
| ATGAAGATCGTTCAGTTATG+TGG | 0.515586 | tig0021982:+50941 | Msa1396030:CDS |
| CTCTTCTCCACAACTGACTC+CGG | 0.518044 | tig0021982:-47289 | None:intergenic |
| CTTCTCTTACAGGACTCAAA+TGG | 0.520799 | tig0021982:-51123 | None:intergenic |
| GGAAATGAGGTGGAGAATGC+CGG | 0.524845 | tig0021982:-46888 | None:intergenic |
| GCCGGCGGTGGTTAAGCATA+CGG | 0.526954 | tig0021982:+47414 | Msa1396030:CDS |
| GCCGGTAAAGTCGGACTCCT+CGG | 0.530010 | tig0021982:-47166 | None:intergenic |
| AACGAAACGAACCGAAGGTG+AGG | 0.534271 | tig0021982:-46940 | None:intergenic |
| GCGTTAGTAGCGAGGCTGAT+GGG | 0.534834 | tig0021982:+47244 | Msa1396030:CDS |
| TGGTGGCAAATTAGCGGTGG+CGG | 0.535065 | tig0021982:-47071 | None:intergenic |
| TTCAGTTATGTGGAGTAGCA+AGG | 0.537258 | tig0021982:+50951 | Msa1396030:CDS |
| AGATTCGCCGTTCGAGTCCA+AGG | 0.544649 | tig0021982:+47191 | Msa1396030:CDS |
| CGAAGGTGAGGAAACGGCGG+TGG | 0.549302 | tig0021982:-46928 | None:intergenic |
| AATTATCACGCGAGGTTCCG+AGG | 0.549305 | tig0021982:+47149 | Msa1396030:CDS |
| TCGAAGACTTACAATGTGAA+TGG | 0.555380 | tig0021982:-47549 | None:intergenic |
| TGATAATTTCGAATTTCGTA+CGG | 0.556195 | tig0021982:-47134 | None:intergenic |
| CTCGAACGGCGAATCTCCGC+CGG | 0.556248 | tig0021982:-47184 | None:intergenic |
| ACGAACCGAAGGTGAGGAAA+CGG | 0.559445 | tig0021982:-46934 | None:intergenic |
| ATTTGTCTAACAAATTACAT+TGG | 0.560698 | tig0021982:+51240 | Msa1396030:three_prime_UTR |
| CAGCAGTTACTGAAGAAGCC+AGG | 0.563875 | tig0021982:+50844 | Msa1396030:CDS |
| TTTGCAGGATTGTATATGCA+GGG | 0.564322 | tig0021982:+51053 | Msa1396030:CDS |
| CTCAGTCCAAATTGTCACTC+CGG | 0.564508 | tig0021982:+47523 | Msa1396030:CDS |
| GTGAAGTGTTCGGTGGTTAA+CGG | 0.571904 | tig0021982:+47445 | Msa1396030:CDS |
| ACCGTATGCTTAACCACCGC+CGG | 0.573875 | tig0021982:-47415 | None:intergenic |
| CGAATCTCCGCCGGTAAAGT+CGG | 0.575052 | tig0021982:-47175 | None:intergenic |
| ACCACCGCCGGCGACGTCGA+CGG | 0.576349 | tig0021982:-47403 | None:intergenic |
| CGAGAGAATGACAAACGAGT+TGG | 0.576947 | tig0021982:+50900 | Msa1396030:CDS |
| TGGTGTAATAAAGAGTATAA+CGG | 0.579233 | tig0021982:-46740 | None:intergenic |
| GGGAATGGGAAGTGGAAATG+AGG | 0.585060 | tig0021982:-46901 | None:intergenic |
| AATGGGAAGTGGAAATGAGG+TGG | 0.587739 | tig0021982:-46898 | None:intergenic |
| TTCTGGTGGCAAATTAGCGG+TGG | 0.590543 | tig0021982:-47074 | None:intergenic |
| TGAGAAGAAGAGTAGTGATG+AGG | 0.597462 | tig0021982:+47105 | Msa1396030:CDS |
| GGTTTGTGAGGTGAAGTGTT+CGG | 0.599032 | tig0021982:+47435 | Msa1396030:CDS |
| ATCAGCCTCGCTACTAACGC+TGG | 0.612829 | tig0021982:-47241 | None:intergenic |
| TCAAGAACAGACACAGGACT+CGG | 0.613130 | tig0021982:-47481 | None:intergenic |
| TCAGTTATGTGGAGTAGCAA+GGG | 0.613803 | tig0021982:+50952 | Msa1396030:CDS |
| TTCGAGTCCAAGGAAGTCAT+CGG | 0.619932 | tig0021982:+47201 | Msa1396030:CDS |
| CTTACAATGTGAATGGCGAC+CGG | 0.622655 | tig0021982:-47542 | None:intergenic |
| AGCGTTAGTAGCGAGGCTGA+TGG | 0.630450 | tig0021982:+47243 | Msa1396030:CDS |
| AAACACCAGCGTTAGTAGCG+AGG | 0.630494 | tig0021982:+47236 | Msa1396030:CDS |
| GGTTAAGCATACGGTTTGTG+AGG | 0.632063 | tig0021982:+47423 | Msa1396030:CDS |
| CGTTCCGTCGACGTCGCCGG+CGG | 0.638784 | tig0021982:+47399 | Msa1396030:CDS |
| GTGTGTAGGGATGTTGCTTG+GGG | 0.646863 | tig0021982:+50997 | Msa1396030:CDS |
| GTTACTGAAGAAGCCAGGAG+AGG | 0.659127 | tig0021982:+50849 | Msa1396030:CDS |
| TTGTGAGGTGAAGTGTTCGG+TGG | 0.659789 | tig0021982:+47438 | Msa1396030:CDS |
| AAATTCGAAATTATCACGCG+AGG | 0.662168 | tig0021982:+47141 | Msa1396030:CDS |
| GTTTCTCGCCGTGAAGACGA+CGG | 0.662502 | tig0021982:-46824 | None:intergenic |
| ATGACTTCCTTGGACTCGAA+CGG | 0.668743 | tig0021982:-47198 | None:intergenic |
| AAGTCGTCAAGAACAGACAC+AGG | 0.683064 | tig0021982:-47487 | None:intergenic |
| TTCACGGCGAGAAACGACGC+CGG | 0.686409 | tig0021982:+46832 | Msa1396030:CDS |
| GAGTGACAATTTGGACTGAG+TGG | 0.688078 | tig0021982:-47520 | None:intergenic |
| GAGGAGTCCGACTTTACCGG+CGG | 0.703444 | tig0021982:+47168 | Msa1396030:CDS |
| AGAAAATCATAGATTCAGTG+AGG | 0.716140 | tig0021982:+47365 | Msa1396030:CDS |
| AGCGTTGCAGAGATGCGACG+AGG | 0.722914 | tig0021982:+47327 | Msa1396030:CDS |
| AACCGAAGGTGAGGAAACGG+CGG | 0.739590 | tig0021982:-46931 | None:intergenic |
| AATGAAGAGACAAAGCAGCG+CGG | 0.779162 | tig0021982:+46796 | Msa1396030:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTGTATATTTTAAATTTT+GGG | - | tig0021982:48276-48295 | None:intergenic | 10.0% |
| !!! | ATTGTGTATATTTTAAATTT+TGG | - | tig0021982:48277-48296 | None:intergenic | 10.0% |
| !! | TAATATAAACTAATAAATCA+TGG | + | tig0021982:49481-49500 | Msa1396030:intron | 10.0% |
| !!! | TTTTACTTAAATAAAAGTAA+TGG | - | tig0021982:49915-49934 | None:intergenic | 10.0% |
| !!! | TGTGTTTTTTTTTTTTTATT+TGG | + | tig0021982:50129-50148 | Msa1396030:intron | 10.0% |
| !! | AATTCAAAAAAGAAAAATAC+TGG | - | tig0021982:47960-47979 | None:intergenic | 15.0% |
| !! | ATTAATCCAAAACATAAAAA+GGG | - | tig0021982:48045-48064 | None:intergenic | 15.0% |
| !! | AATTAATCCAAAACATAAAA+AGG | - | tig0021982:48046-48065 | None:intergenic | 15.0% |
| !!! | AGAAGTTATGATTTAAAATT+TGG | - | tig0021982:48476-48495 | None:intergenic | 15.0% |
| !! | AAATTAATCACTGTTAAATT+AGG | - | tig0021982:48573-48592 | None:intergenic | 15.0% |
| !! | AAATTAATCATAGTTGAATT+AGG | - | tig0021982:48639-48658 | None:intergenic | 15.0% |
| !!! | TTTTTGTAGTAATAATAGTT+GGG | - | tig0021982:48668-48687 | None:intergenic | 15.0% |
| !!! | ATTTTTGTAGTAATAATAGT+TGG | - | tig0021982:48669-48688 | None:intergenic | 15.0% |
| !! | AAATCAATTATACATTCAAT+TGG | - | tig0021982:48754-48773 | None:intergenic | 15.0% |
| !! | TGTTAATAAAATTGAATAGA+CGG | - | tig0021982:48854-48873 | None:intergenic | 15.0% |
| !! | AAAAAAGAAAAAAGAAAAAG+TGG | + | tig0021982:48939-48958 | Msa1396030:intron | 15.0% |
| !!! | TACACTTTTTTTTAGAAAAT+GGG | - | tig0021982:48999-49018 | None:intergenic | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | tig0021982:49263-49282 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | tig0021982:49264-49283 | None:intergenic | 15.0% |
| !! | AAGAAAAATGTATAAAGAAA+GGG | - | tig0021982:49328-49347 | None:intergenic | 15.0% |
| !! | TAAGAAAAATGTATAAAGAA+AGG | - | tig0021982:49329-49348 | None:intergenic | 15.0% |
| !!! | AGTTTATATTATTATCGTTT+TGG | - | tig0021982:49472-49491 | None:intergenic | 15.0% |
| !! | TTAATTATAAGAGAATCAAT+TGG | + | tig0021982:50509-50528 | Msa1396030:intron | 15.0% |
| !! | TAATTATAAGAGAATCAATT+GGG | + | tig0021982:50510-50529 | Msa1396030:intron | 15.0% |
| !!! | TTTGCTTCCTAATTTTATTT+TGG | + | tig0021982:48064-48083 | Msa1396030:intron | 20.0% |
| !! | ATGTACTCCAAAATAAAATT+AGG | - | tig0021982:48074-48093 | None:intergenic | 20.0% |
| !! | ACTAAAATGCATGTAATTAT+CGG | - | tig0021982:48189-48208 | None:intergenic | 20.0% |
| !!! | GATTGAAAATGTTTTTTCAT+AGG | - | tig0021982:48324-48343 | None:intergenic | 20.0% |
| !!! | TCCATTTTTCCATTTTTTTT+AGG | + | tig0021982:48447-48466 | Msa1396030:intron | 20.0% |
| !! | TCCTAAAAAAAATGGAAAAA+TGG | - | tig0021982:48451-48470 | None:intergenic | 20.0% |
| !!! | CACAGACAATTATAAAATTT+TGG | + | tig0021982:48778-48797 | Msa1396030:intron | 20.0% |
| !! | TATTAACATATCATGATTAG+TGG | + | tig0021982:48866-48885 | Msa1396030:intron | 20.0% |
| !! | TATTAACATATCATGATTAG+TGG | + | tig0021982:48866-48885 | Msa1396030:intron | 20.0% |
| !!! | GTACACTTTTTTTTAGAAAA+TGG | - | tig0021982:49000-49019 | None:intergenic | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | - | tig0021982:49230-49249 | None:intergenic | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | - | tig0021982:49231-49250 | None:intergenic | 20.0% |
| !! | AGAAAAATGTATAAAGAAAG+GGG | - | tig0021982:49327-49346 | None:intergenic | 20.0% |
| !! | AAAATTGTGTCAATTAAACT+GGG | + | tig0021982:49364-49383 | Msa1396030:intron | 20.0% |
| !! | TTTCTTATAGTACAAAATAG+TGG | - | tig0021982:49530-49549 | None:intergenic | 20.0% |
| !!! | ACTATTTTGTACTATAAGAA+AGG | + | tig0021982:49529-49548 | Msa1396030:intron | 20.0% |
| !! | TCTCTTATTGTGTTTATATA+AGG | + | tig0021982:49830-49849 | Msa1396030:intron | 20.0% |
| !! | GAGAAAAAATTTATGATGTA+GGG | + | tig0021982:50074-50093 | Msa1396030:intron | 20.0% |
| !!! | GGTAGTGTATATATATTTTT+TGG | + | tig0021982:50150-50169 | Msa1396030:intron | 20.0% |
| !!! | GTTTTAACATTCAAATTTCT+AGG | - | tig0021982:50625-50644 | None:intergenic | 20.0% |
| !! | AAACAAATGTCTATATAACA+TGG | + | tig0021982:50671-50690 | Msa1396030:intron | 20.0% |
| !! | AAAATAAAACTGATGTCTAA+TGG | + | tig0021982:50784-50803 | Msa1396030:intron | 20.0% |
| !! | ATTTGTCTAACAAATTACAT+TGG | + | tig0021982:51240-51259 | Msa1396030:three_prime_UTR | 20.0% |
| ! | TGATAATTTCGAATTTCGTA+CGG | - | tig0021982:47137-47156 | None:intergenic | 25.0% |
| ! | ATCATGCAATTTACACTAAT+TGG | - | tig0021982:47631-47650 | None:intergenic | 25.0% |
| !!! | TGATTTTAACATTCTTTGCA+TGG | + | tig0021982:47647-47666 | Msa1396030:intron | 25.0% |
| !!! | AGTTTTATGTTTTACTAGCA+AGG | + | tig0021982:47726-47745 | Msa1396030:intron | 25.0% |
| ! | GATGATAGATCATTAGAAAT+AGG | + | tig0021982:47830-47849 | Msa1396030:intron | 25.0% |
| ! | GATGAACTGATTAACTATTT+AGG | + | tig0021982:47886-47905 | Msa1396030:intron | 25.0% |
| !!! | TTGAATTTGCTTTAAGAGTT+AGG | + | tig0021982:47973-47992 | Msa1396030:intron | 25.0% |
| !! | TAAACTCCCTTTTTATGTTT+TGG | + | tig0021982:48036-48055 | Msa1396030:intron | 25.0% |
| ! | GGAGTACATAATTGAATAAA+TGG | + | tig0021982:48085-48104 | Msa1396030:intron | 25.0% |
| !!! | TGTACTACTCTTGTATTTTT+TGG | + | tig0021982:48152-48171 | Msa1396030:intron | 25.0% |
| !!! | GTACTACTCTTGTATTTTTT+GGG | + | tig0021982:48153-48172 | Msa1396030:intron | 25.0% |
| !!! | AGTTGTTAGATTAAGTTGAA+TGG | + | tig0021982:48206-48225 | Msa1396030:intron | 25.0% |
| ! | AAAAATGGAAAAATGGATAG+AGG | - | tig0021982:48444-48463 | None:intergenic | 25.0% |
| ! | ATTTGGCATCCTAAAAAAAA+TGG | - | tig0021982:48459-48478 | None:intergenic | 25.0% |
| ! | GTTAATCACATGTAAAATTG+TGG | + | tig0021982:48723-48742 | Msa1396030:intron | 25.0% |
| ! | CAATTCAAGGTCAAAATTTA+TGG | - | tig0021982:48825-48844 | None:intergenic | 25.0% |
| !!! | CTTTTTTTTAGAAAATGGGT+CGG | - | tig0021982:48995-49014 | None:intergenic | 25.0% |
| !!! | CACAAGATTTTCTCTTATTT+TGG | - | tig0021982:49022-49041 | None:intergenic | 25.0% |
| ! | AAATAAGAGAAAATCTTGTG+TGG | + | tig0021982:49022-49041 | Msa1396030:intron | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | tig0021982:49305-49324 | None:intergenic | 25.0% |
| ! | CAAAATTGTGTCAATTAAAC+TGG | + | tig0021982:49363-49382 | Msa1396030:intron | 25.0% |
| ! | ACTAATAAATCATGGTACTT+TGG | + | tig0021982:49489-49508 | Msa1396030:intron | 25.0% |
| ! | AAAGATGTTTCAAAAGGAAA+AGG | + | tig0021982:49595-49614 | Msa1396030:intron | 25.0% |
| ! | GAAACAGTTTATCATTATTG+AGG | + | tig0021982:49852-49871 | Msa1396030:intron | 25.0% |
| ! | TCAATACCAAAATTAGTTGT+TGG | + | tig0021982:49965-49984 | Msa1396030:intron | 25.0% |
| ! | CAATACCAAAATTAGTTGTT+GGG | + | tig0021982:49966-49985 | Msa1396030:intron | 25.0% |
| ! | GGAGAAAAAATTTATGATGT+AGG | + | tig0021982:50073-50092 | Msa1396030:intron | 25.0% |
| ! | AAAATTTATGATGTAGGGAA+AGG | + | tig0021982:50079-50098 | Msa1396030:intron | 25.0% |
| ! | AAATTTATGATGTAGGGAAA+GGG | + | tig0021982:50080-50099 | Msa1396030:intron | 25.0% |
| !!! | ATAGCTTTGAACCATATTTT+TGG | - | tig0021982:50294-50313 | None:intergenic | 25.0% |
| ! | AAAAATATGGTTCAAAGCTA+TGG | + | tig0021982:50293-50312 | Msa1396030:intron | 25.0% |
| ! | AATTGAGCTCTTAATTGTTA+GGG | + | tig0021982:50588-50607 | Msa1396030:intron | 25.0% |
| !! | CATTCAAATTTCTAGGAAAA+TGG | - | tig0021982:50618-50637 | None:intergenic | 25.0% |
| ! | AGACAAATACACAAGTATAA+GGG | - | tig0021982:51228-51247 | None:intergenic | 25.0% |
| ! | TAGACAAATACACAAGTATA+AGG | - | tig0021982:51229-51248 | None:intergenic | 25.0% |
| ! | TCTCTTATGAAAGTGAGTTT+TGG | - | tig0021982:46773-46792 | None:intergenic | 30.0% |
| AAAATTCACGTCAAGACAAT+TGG | + | tig0021982:46857-46876 | Msa1396030:CDS | 30.0% | |
| !!! | TTCTTCTCATTCGTTTTTTC+TGG | - | tig0021982:47094-47113 | None:intergenic | 30.0% |
| AGAAAATCATAGATTCAGTG+AGG | + | tig0021982:47365-47384 | Msa1396030:CDS | 30.0% | |
| !!! | CTCTTGTATTTTTTGGGATT+TGG | + | tig0021982:48159-48178 | Msa1396030:intron | 30.0% |
| AAATCATTGTGTCTTCTGTA+AGG | - | tig0021982:48400-48419 | None:intergenic | 30.0% | |
| ATCATAGTTGAATTAGGTTC+TGG | - | tig0021982:48633-48652 | None:intergenic | 30.0% | |
| TAGTAATAATAGTTGGGAAG+AGG | - | tig0021982:48662-48681 | None:intergenic | 30.0% | |
| ! | GTGATTAACCAGATGTTTTA+GGG | - | tig0021982:48712-48731 | None:intergenic | 30.0% |
| ! | TGTGATTAACCAGATGTTTT+AGG | - | tig0021982:48713-48732 | None:intergenic | 30.0% |
| TAGACGGTTAATTCAATTCA+AGG | - | tig0021982:48838-48857 | None:intergenic | 30.0% | |
| !! | TGAAATGGGTCAGTTATTTT+GGG | - | tig0021982:49216-49235 | None:intergenic | 30.0% |
| ! | TTGAAATGGGTCAGTTATTT+TGG | - | tig0021982:49217-49236 | None:intergenic | 30.0% |
| AATTCCGGTTCTATAGTATA+GGG | - | tig0021982:49414-49433 | None:intergenic | 30.0% | |
| TAATTCCGGTTCTATAGTAT+AGG | - | tig0021982:49415-49434 | None:intergenic | 30.0% | |
| ! | AGTTAGCTTCTCTTTAATTC+CGG | - | tig0021982:49429-49448 | None:intergenic | 30.0% |
| AATAAATCATGGTACTTTGG+TGG | + | tig0021982:49492-49511 | Msa1396030:intron | 30.0% | |
| CAGTCAAAAGATGTTTCAAA+AGG | + | tig0021982:49589-49608 | Msa1396030:intron | 30.0% | |
| ATGTTTCAAAAGGAAAAGGA+GGG | + | tig0021982:49599-49618 | Msa1396030:intron | 30.0% | |
| ! | AATTTTCTGTACACCATTGT+TGG | - | tig0021982:50005-50024 | None:intergenic | 30.0% |
| ! | CCTAAGTCTATTTAGTTCAA+CGG | + | tig0021982:50039-50058 | Msa1396030:intron | 30.0% |
| ! | TTTGTGTTTAGTTCAACTAG+AGG | + | tig0021982:50184-50203 | Msa1396030:intron | 30.0% |
| ! | TTTTCACTCGAGCTAAAATT+AGG | + | tig0021982:50248-50267 | Msa1396030:intron | 30.0% |
| !!! | CTTTGAACCATATTTTTGGT+CGG | - | tig0021982:50290-50309 | None:intergenic | 30.0% |
| AAAGCTATGGAATACCATAA+GGG | + | tig0021982:50306-50325 | Msa1396030:intron | 30.0% | |
| TTCAGTCAAGATTTGAACTT+AGG | - | tig0021982:50540-50559 | None:intergenic | 30.0% | |
| CAATTGAGCTCTTAATTGTT+AGG | + | tig0021982:50587-50606 | Msa1396030:intron | 30.0% | |
| ! | AAAGTGTTATAAGCTAGAAG+TGG | - | tig0021982:50749-50768 | None:intergenic | 30.0% |
| GAAGAGATTGTTAGAGAATT+AGG | + | tig0021982:51084-51103 | Msa1396030:CDS | 30.0% | |
| CAAATTACATTGGATTTAGC+TGG | + | tig0021982:51250-51269 | Msa1396030:three_prime_UTR | 30.0% | |
| !! | CTTATGAAAGTGAGTTTTGG+TGG | - | tig0021982:46770-46789 | None:intergenic | 35.0% |
| !! | TTTTTCTGGTGGCAAATTAG+CGG | - | tig0021982:47080-47099 | None:intergenic | 35.0% |
| !!! | TTCTCATTCGTTTTTTCTGG+TGG | - | tig0021982:47091-47110 | None:intergenic | 35.0% |
| AAATTCGAAATTATCACGCG+AGG | + | tig0021982:47141-47160 | Msa1396030:CDS | 35.0% | |
| TCGAAGACTTACAATGTGAA+TGG | - | tig0021982:47552-47571 | None:intergenic | 35.0% | |
| ! | CAGAGTTTACGTTTTACAGT+AGG | + | tig0021982:47751-47770 | Msa1396030:intron | 35.0% |
| GTGCGAAATGACTAAAAGTA+GGG | + | tig0021982:47995-48014 | Msa1396030:intron | 35.0% | |
| TGCGAAATGACTAAAAGTAG+GGG | + | tig0021982:47996-48015 | Msa1396030:intron | 35.0% | |
| TCTTCTATTCCACAACATCA+TGG | + | tig0021982:48493-48512 | Msa1396030:intron | 35.0% | |
| ! | ATTAAGTTGTCTGCCACTAT+AGG | - | tig0021982:48523-48542 | None:intergenic | 35.0% |
| AAGATGATTGCATAACCAAC+AGG | - | tig0021982:48547-48566 | None:intergenic | 35.0% | |
| !!! | CAGATGTTTTAGGGAAAAAC+GGG | - | tig0021982:48703-48722 | None:intergenic | 35.0% |
| !!! | CCAGATGTTTTAGGGAAAAA+CGG | - | tig0021982:48704-48723 | None:intergenic | 35.0% |
| TGTGACCAAACCAAAATTCT+TGG | - | tig0021982:49167-49186 | None:intergenic | 35.0% | |
| TGTGACCAAACCAAAATTCT+TGG | + | tig0021982:49167-49186 | Msa1396030:intron | 35.0% | |
| !!! | CAAGACCAAGAATTTTGGTT+TGG | - | tig0021982:49175-49194 | None:intergenic | 35.0% |
| CAAACCAAAATTCTTGGTCT+TGG | + | tig0021982:49173-49192 | Msa1396030:intron | 35.0% | |
| TGTATAAAGAAAGGGGAAAG+TGG | - | tig0021982:49320-49339 | None:intergenic | 35.0% | |
| GTTTCCCTATACTATAGAAC+CGG | + | tig0021982:49407-49426 | Msa1396030:intron | 35.0% | |
| CATAATTCATAGCTAGCATG+AGG | - | tig0021982:49561-49580 | None:intergenic | 35.0% | |
| GATGTTTCAAAAGGAAAAGG+AGG | + | tig0021982:49598-49617 | Msa1396030:intron | 35.0% | |
| GCAGGTAATAAAGTTCCAAA+GGG | - | tig0021982:49646-49665 | None:intergenic | 35.0% | |
| ! | TAACAAGGCTCTTGTTTGTT+GGG | - | tig0021982:49740-49759 | None:intergenic | 35.0% |
| TACCAAAATTAGTTGTTGGG+TGG | + | tig0021982:49969-49988 | Msa1396030:intron | 35.0% | |
| ACCAAAATTAGTTGTTGGGT+GGG | + | tig0021982:49970-49989 | Msa1396030:intron | 35.0% | |
| CCGTTGAACTAAATAGACTT+AGG | - | tig0021982:50042-50061 | None:intergenic | 35.0% | |
| CGAGCTAAAATTAGGTTACA+TGG | + | tig0021982:50256-50275 | Msa1396030:intron | 35.0% | |
| TTACCTTCCGACCAAAAATA+TGG | + | tig0021982:50280-50299 | Msa1396030:intron | 35.0% | |
| CAAAGCTATGGAATACCATA+AGG | + | tig0021982:50305-50324 | Msa1396030:intron | 35.0% | |
| ACTAAGTGATTGAACTCAAG+TGG | + | tig0021982:50476-50495 | Msa1396030:intron | 35.0% | |
| GTTCAAATCTTGACTGAAGT+TGG | + | tig0021982:50542-50561 | Msa1396030:intron | 35.0% | |
| TGTTATAAGCTAGAAGTGGA+AGG | - | tig0021982:50745-50764 | None:intergenic | 35.0% | |
| ATGAAGATCGTTCAGTTATG+TGG | + | tig0021982:50941-50960 | Msa1396030:CDS | 35.0% | |
| AAGTGTAGATGAAGTGTGTA+GGG | + | tig0021982:50984-51003 | Msa1396030:CDS | 35.0% | |
| AATAGAGAGCTTGGAAGAAT+AGG | + | tig0021982:51024-51043 | Msa1396030:CDS | 35.0% | |
| !! | AAGAATAGGATTAGCTTTGC+AGG | + | tig0021982:51038-51057 | Msa1396030:CDS | 35.0% |
| TTTGCAGGATTGTATATGCA+GGG | + | tig0021982:51053-51072 | Msa1396030:CDS | 35.0% | |
| ! | GTCTTGACGTGAATTTTGTC+CGG | - | tig0021982:46854-46873 | None:intergenic | 40.0% |
| CCTGAAAACGAGGACAAAAA+AGG | - | tig0021982:47016-47035 | None:intergenic | 40.0% | |
| !!! | CCTTTTTTGTCCTCGTTTTC+AGG | + | tig0021982:47013-47032 | Msa1396030:intron | 40.0% |
| !!! | TTTTGTCCTCGTTTTCAGGT+AGG | + | tig0021982:47017-47036 | Msa1396030:intron | 40.0% |
| TGAGAAGAAGAGTAGTGATG+AGG | + | tig0021982:47105-47124 | Msa1396030:CDS | 40.0% | |
| GGTGCGAAATGACTAAAAGT+AGG | + | tig0021982:47994-48013 | Msa1396030:intron | 40.0% | |
| GCGAAATGACTAAAAGTAGG+GGG | + | tig0021982:47997-48016 | Msa1396030:intron | 40.0% | |
| CGAAATGACTAAAAGTAGGG+GGG | + | tig0021982:47998-48017 | Msa1396030:intron | 40.0% | |
| GAAATGACTAAAAGTAGGGG+GGG | + | tig0021982:47999-48018 | Msa1396030:intron | 40.0% | |
| GCAGACAACTTAATTCCTGT+TGG | + | tig0021982:48529-48548 | Msa1396030:intron | 40.0% | |
| TTCTGGATGAATGAGCTAAG+GGG | - | tig0021982:48616-48635 | None:intergenic | 40.0% | |
| ! | GTTCTGGATGAATGAGCTAA+GGG | - | tig0021982:48617-48636 | None:intergenic | 40.0% |
| !! | CCGTTTTTCCCTAAAACATC+TGG | + | tig0021982:48701-48720 | Msa1396030:intron | 40.0% |
| AGAAAATGGGTCGGTTATTC+CGG | - | tig0021982:48986-49005 | None:intergenic | 40.0% | |
| CAAACCAAAATTCTTGGTCC+TGG | - | tig0021982:49049-49068 | None:intergenic | 40.0% | |
| !!! | CAGGACCAAGAATTTTGGTT+TGG | + | tig0021982:49047-49066 | Msa1396030:intron | 40.0% |
| ! | TGGACCAAGACCAAGAATTT+TGG | - | tig0021982:49180-49199 | None:intergenic | 40.0% |
| !! | TTTTGGGAGAAACACTTGTG+TGG | - | tig0021982:49200-49219 | None:intergenic | 40.0% |
| TGTCAATTAAACTGGGACTG+AGG | + | tig0021982:49371-49390 | Msa1396030:intron | 40.0% | |
| ! | AACTAATGACCGTTTTGCTC+TGG | + | tig0021982:49445-49464 | Msa1396030:intron | 40.0% |
| AATCATGGTACTTTGGTGGA+TGG | + | tig0021982:49496-49515 | Msa1396030:intron | 40.0% | |
| AAGAAATACACACCACCCTT+TGG | + | tig0021982:49628-49647 | Msa1396030:intron | 40.0% | |
| GGTAATAAAGTTCCAAAGGG+TGG | - | tig0021982:49643-49662 | None:intergenic | 40.0% | |
| GGCAGGTAATAAAGTTCCAA+AGG | - | tig0021982:49647-49666 | None:intergenic | 40.0% | |
| !!! | ATGCAGAAACGCACTTTTTC+AGG | + | tig0021982:49674-49693 | Msa1396030:intron | 40.0% |
| !!! | TGCAGAAACGCACTTTTTCA+GGG | + | tig0021982:49675-49694 | Msa1396030:intron | 40.0% |
| ! | GTAACAAGGCTCTTGTTTGT+TGG | - | tig0021982:49741-49760 | None:intergenic | 40.0% |
| ! | ACCCACCCAACAACTAATTT+TGG | - | tig0021982:49974-49993 | None:intergenic | 40.0% |
| AGTTCAACGGAACTCATGAA+AGG | + | tig0021982:50052-50071 | Msa1396030:intron | 40.0% | |
| TGATGTAGGGAAAGGGAAAA+AGG | + | tig0021982:50087-50106 | Msa1396030:intron | 40.0% | |
| GATGTAGGGAAAGGGAAAAA+GGG | + | tig0021982:50088-50107 | Msa1396030:intron | 40.0% | |
| ! | GTTTAGTTCAACTAGAGGAG+TGG | + | tig0021982:50189-50208 | Msa1396030:intron | 40.0% |
| !!! | GAACCATATTTTTGGTCGGA+AGG | - | tig0021982:50286-50305 | None:intergenic | 40.0% |
| TTCAGTTATGTGGAGTAGCA+AGG | + | tig0021982:50951-50970 | Msa1396030:CDS | 40.0% | |
| TCAGTTATGTGGAGTAGCAA+GGG | + | tig0021982:50952-50971 | Msa1396030:CDS | 40.0% | |
| GAAGTGTAGATGAAGTGTGT+AGG | + | tig0021982:50983-51002 | Msa1396030:CDS | 40.0% | |
| CTTTGCAGGATTGTATATGC+AGG | + | tig0021982:51052-51071 | Msa1396030:CDS | 40.0% | |
| CTTCTCTTACAGGACTCAAA+TGG | - | tig0021982:51126-51145 | None:intergenic | 40.0% | |
| CTCTGCTTCTGAACTATACA+TGG | + | tig0021982:51147-51166 | Msa1396030:exon | 40.0% | |
| !!! | AAGTGAGTTTTGGTGGTGAG+TGG | - | tig0021982:46763-46782 | None:intergenic | 45.0% |
| AATGAAGAGACAAAGCAGCG+CGG | + | tig0021982:46796-46815 | Msa1396030:exon | 45.0% | |
| AAGACAATTGGCTGCATGTC+CGG | + | tig0021982:46869-46888 | Msa1396030:CDS | 45.0% | |
| AATGGGAAGTGGAAATGAGG+TGG | - | tig0021982:46901-46920 | None:intergenic | 45.0% | |
| TGAGAAACGAAACGAACCGA+AGG | - | tig0021982:46948-46967 | None:intergenic | 45.0% | |
| CTGTTTCCTACCTGAAAACG+AGG | - | tig0021982:47026-47045 | None:intergenic | 45.0% | |
| ATGACTTCCTTGGACTCGAA+CGG | - | tig0021982:47201-47220 | None:intergenic | 45.0% | |
| TTCGAGTCCAAGGAAGTCAT+CGG | + | tig0021982:47201-47220 | Msa1396030:CDS | 45.0% | |
| ACATTCTCCGATGACTTCCT+TGG | - | tig0021982:47211-47230 | None:intergenic | 45.0% | |
| GGTTAAGCATACGGTTTGTG+AGG | + | tig0021982:47423-47442 | Msa1396030:CDS | 45.0% | |
| ! | GGTTTGTGAGGTGAAGTGTT+CGG | + | tig0021982:47435-47454 | Msa1396030:CDS | 45.0% |
| ! | GTGAAGTGTTCGGTGGTTAA+CGG | + | tig0021982:47445-47464 | Msa1396030:CDS | 45.0% |
| TCAAGAACAGACACAGGACT+CGG | - | tig0021982:47484-47503 | None:intergenic | 45.0% | |
| AAGTCGTCAAGAACAGACAC+AGG | - | tig0021982:47490-47509 | None:intergenic | 45.0% | |
| GAGTGACAATTTGGACTGAG+TGG | - | tig0021982:47523-47542 | None:intergenic | 45.0% | |
| CTCAGTCCAAATTGTCACTC+CGG | + | tig0021982:47523-47542 | Msa1396030:CDS | 45.0% | |
| CTTACAATGTGAATGGCGAC+CGG | - | tig0021982:47545-47564 | None:intergenic | 45.0% | |
| ACTAAAAGTAGGGGGGGAAA+TGG | + | tig0021982:48005-48024 | Msa1396030:intron | 45.0% | |
| CTAAAAGTAGGGGGGGAAAT+GGG | + | tig0021982:48006-48025 | Msa1396030:intron | 45.0% | |
| TAAAAGTAGGGGGGGAAATG+GGG | + | tig0021982:48007-48026 | Msa1396030:intron | 45.0% | |
| ATAGGATGGCCATGATGTTG+TGG | - | tig0021982:48505-48524 | None:intergenic | 45.0% | |
| ACATCATGGCCATCCTATAG+TGG | + | tig0021982:48507-48526 | Msa1396030:intron | 45.0% | |
| AGTTGTCTGCCACTATAGGA+TGG | - | tig0021982:48519-48538 | None:intergenic | 45.0% | |
| !! | GGTTCTGGATGAATGAGCTA+AGG | - | tig0021982:48618-48637 | None:intergenic | 45.0% |
| ATATGATACTCCCTTCGTCC+CGG | + | tig0021982:48964-48983 | Msa1396030:intron | 45.0% | |
| GAAAATGGGTCGGTTATTCC+GGG | - | tig0021982:48985-49004 | None:intergenic | 45.0% | |
| GAGAAAATCTTGTGTGGACC+AGG | + | tig0021982:49028-49047 | Msa1396030:intron | 45.0% | |
| ! | TGGACCAGGACCAAGAATTT+TGG | + | tig0021982:49042-49061 | Msa1396030:intron | 45.0% |
| GAGAGAAGAGAAGAGAGAGA+AGG | - | tig0021982:49093-49112 | None:intergenic | 45.0% | |
| !! | CGTTTTGGACCAGAGCAAAA+CGG | - | tig0021982:49457-49476 | None:intergenic | 45.0% |
| AGTGCGTTTCTGCATGACTA+GGG | - | tig0021982:49669-49688 | None:intergenic | 45.0% | |
| AAGTGCGTTTCTGCATGACT+AGG | - | tig0021982:49670-49689 | None:intergenic | 45.0% | |
| TGCAGGTTAATTCATGCGTG+TGG | + | tig0021982:49785-49804 | Msa1396030:intron | 45.0% | |
| AGGTTAATTCATGCGTGTGG+TGG | + | tig0021982:49788-49807 | Msa1396030:intron | 45.0% | |
| GAGAAGACAACGTCTTCATC+AGG | - | tig0021982:49814-49833 | None:intergenic | 45.0% | |
| GTACACCATTGTTGGTACCA+GGG | - | tig0021982:49997-50016 | None:intergenic | 45.0% | |
| TGTACACCATTGTTGGTACC+AGG | - | tig0021982:49998-50017 | None:intergenic | 45.0% | |
| ATACCATAAGGGTTCTCGCA+TGG | + | tig0021982:50317-50336 | Msa1396030:intron | 45.0% | |
| !! | CTGTTGATTTCTTCCTCTCC+TGG | - | tig0021982:50865-50884 | None:intergenic | 45.0% |
| CGAGAGAATGACAAACGAGT+TGG | + | tig0021982:50900-50919 | Msa1396030:CDS | 45.0% | |
| AAGTGTGTAGGGATGTTGCT+TGG | + | tig0021982:50995-51014 | Msa1396030:CDS | 45.0% | |
| ! | AGTGTGTAGGGATGTTGCTT+GGG | + | tig0021982:50996-51015 | Msa1396030:CDS | 45.0% |
| TGGGGAGAAAATAGAGAGCT+TGG | + | tig0021982:51015-51034 | Msa1396030:CDS | 45.0% | |
| GAAGCAGAGTCTTCTCTTAC+AGG | - | tig0021982:51136-51155 | None:intergenic | 45.0% | |
| !!! | TTTCTTTTTTTTTTTTTTTT+TGG | + | tig0021982:47923-47942 | Msa1396030:intron | 5.0% |
| !! | TATTAAAAATTAAATTAATG+TGG | + | tig0021982:48120-48139 | Msa1396030:intron | 5.0% |
| GGAAATGAGGTGGAGAATGC+CGG | - | tig0021982:46891-46910 | None:intergenic | 50.0% | |
| GGGAATGGGAAGTGGAAATG+AGG | - | tig0021982:46904-46923 | None:intergenic | 50.0% | |
| ACGAACCGAAGGTGAGGAAA+CGG | - | tig0021982:46937-46956 | None:intergenic | 50.0% | |
| AACGAAACGAACCGAAGGTG+AGG | - | tig0021982:46943-46962 | None:intergenic | 50.0% | |
| GGCGGTGGAAACTTGATTCT+TGG | - | tig0021982:47050-47069 | None:intergenic | 50.0% | |
| TTCTGGTGGCAAATTAGCGG+TGG | - | tig0021982:47077-47096 | None:intergenic | 50.0% | |
| AATTATCACGCGAGGTTCCG+AGG | + | tig0021982:47149-47168 | Msa1396030:CDS | 50.0% | |
| AAACACCAGCGTTAGTAGCG+AGG | + | tig0021982:47236-47255 | Msa1396030:CDS | 50.0% | |
| ! | CTCTTCTCCACAACTGACTC+CGG | - | tig0021982:47292-47311 | None:intergenic | 50.0% |
| GAGAAGAGACAGAAGCTGCT+TGG | + | tig0021982:47304-47323 | Msa1396030:CDS | 50.0% | |
| GAGATGCGACGAGGATCTTA+AGG | + | tig0021982:47336-47355 | Msa1396030:CDS | 50.0% | |
| ! | TTGTGAGGTGAAGTGTTCGG+TGG | + | tig0021982:47438-47457 | Msa1396030:CDS | 50.0% |
| GTGCGTTTCTGCATGACTAG+GGG | - | tig0021982:49668-49687 | None:intergenic | 50.0% | |
| ! | GCTCTTGTTTGTTGGGAGGA+GGG | - | tig0021982:49733-49752 | None:intergenic | 50.0% |
| ! | CAAGGCTCTTGTTTGTTGGG+AGG | - | tig0021982:49737-49756 | None:intergenic | 50.0% |
| CGCAGGTACTTCATTTCTGC+AGG | + | tig0021982:49768-49787 | Msa1396030:intron | 50.0% | |
| CATCCATGCGAGAACCCTTA+TGG | - | tig0021982:50323-50342 | None:intergenic | 50.0% | |
| CATAAGGGTTCTCGCATGGA+TGG | + | tig0021982:50321-50340 | Msa1396030:intron | 50.0% | |
| CAGCAGTTACTGAAGAAGCC+AGG | + | tig0021982:50844-50863 | Msa1396030:CDS | 50.0% | |
| GTTACTGAAGAAGCCAGGAG+AGG | + | tig0021982:50849-50868 | Msa1396030:CDS | 50.0% | |
| ! | GTGTGTAGGGATGTTGCTTG+GGG | + | tig0021982:50997-51016 | Msa1396030:CDS | 50.0% |
| GTTTCTCGCCGTGAAGACGA+CGG | - | tig0021982:46827-46846 | None:intergenic | 55.0% | |
| AACCGAAGGTGAGGAAACGG+CGG | - | tig0021982:46934-46953 | None:intergenic | 55.0% | |
| TGGTGGCAAATTAGCGGTGG+CGG | - | tig0021982:47074-47093 | None:intergenic | 55.0% | |
| TCCGAGGAGTCCGACTTTAC+CGG | + | tig0021982:47165-47184 | Msa1396030:CDS | 55.0% | |
| CGAATCTCCGCCGGTAAAGT+CGG | - | tig0021982:47178-47197 | None:intergenic | 55.0% | |
| AGATTCGCCGTTCGAGTCCA+AGG | + | tig0021982:47191-47210 | Msa1396030:CDS | 55.0% | |
| ATCAGCCTCGCTACTAACGC+TGG | - | tig0021982:47244-47263 | None:intergenic | 55.0% | |
| AGCGTTAGTAGCGAGGCTGA+TGG | + | tig0021982:47243-47262 | Msa1396030:CDS | 55.0% | |
| GCGTTAGTAGCGAGGCTGAT+GGG | + | tig0021982:47244-47263 | Msa1396030:CDS | 55.0% | |
| GATGGGACTGGAATCGCTTC+CGG | + | tig0021982:47261-47280 | Msa1396030:CDS | 55.0% | |
| ! | ACAACTGACTCCGGTGAAGC+CGG | - | tig0021982:47283-47302 | None:intergenic | 55.0% |
| ACCGTATGCTTAACCACCGC+CGG | - | tig0021982:47418-47437 | None:intergenic | 55.0% | |
| ACACAGGACTCGGCTGTTGT+TGG | - | tig0021982:47474-47493 | None:intergenic | 55.0% | |
| TGGCGACCGGAGTGACAATT+TGG | - | tig0021982:47532-47551 | None:intergenic | 55.0% | |
| GTCGGTTATTCCGGGACGAA+GGG | - | tig0021982:48977-48996 | None:intergenic | 55.0% | |
| GTTTCTGCATGACTAGGGGC+AGG | - | tig0021982:49664-49683 | None:intergenic | 55.0% | |
| ! | TGTTTGTTGGGAGGAGGGAG+TGG | - | tig0021982:49728-49747 | None:intergenic | 55.0% |
| ! | GGCTCTTGTTTGTTGGGAGG+AGG | - | tig0021982:49734-49753 | None:intergenic | 55.0% |
| ACCTGCGCGAGCAAGTAACA+AGG | - | tig0021982:49755-49774 | None:intergenic | 55.0% | |
| TTAGTTGTTGGGTGGGTCCC+TGG | + | tig0021982:49977-49996 | Msa1396030:intron | 55.0% | |
| TGGGTCCCTGGTACCAACAA+TGG | + | tig0021982:49989-50008 | Msa1396030:intron | 55.0% | |
| AAGGGTTCTCGCATGGATGG+TGG | + | tig0021982:50324-50343 | Msa1396030:intron | 55.0% | |
| TTCACGGCGAGAAACGACGC+CGG | + | tig0021982:46832-46851 | Msa1396030:CDS | 60.0% | |
| CACCGCCGTTTCCTCACCTT+CGG | + | tig0021982:46929-46948 | Msa1396030:CDS | 60.0% | |
| ! | CAAATTAGCGGTGGCGGTGG+CGG | - | tig0021982:47068-47087 | None:intergenic | 60.0% |
| ! | TGGCAAATTAGCGGTGGCGG+TGG | - | tig0021982:47071-47090 | None:intergenic | 60.0% |
| GCCGGTAAAGTCGGACTCCT+CGG | - | tig0021982:47169-47188 | None:intergenic | 60.0% | |
| GAGGAGTCCGACTTTACCGG+CGG | + | tig0021982:47168-47187 | Msa1396030:CDS | 60.0% | |
| AGTAGCGAGGCTGATGGGAC+TGG | + | tig0021982:47249-47268 | Msa1396030:CDS | 60.0% | |
| GGAATCGCTTCCGGCTTCAC+CGG | + | tig0021982:47270-47289 | Msa1396030:CDS | 60.0% | |
| GGCTTCACCGGAGTCAGTTG+TGG | + | tig0021982:47282-47301 | Msa1396030:CDS | 60.0% | |
| AGCGTTGCAGAGATGCGACG+AGG | + | tig0021982:47327-47346 | Msa1396030:CDS | 60.0% | |
| GACGTCGACGGAACGAGTTC+AGG | - | tig0021982:47394-47413 | None:intergenic | 60.0% | |
| GCCGGCGGTGGTTAAGCATA+CGG | + | tig0021982:47414-47433 | Msa1396030:CDS | 60.0% | |
| GGTCGGTTATTCCGGGACGA+AGG | - | tig0021982:48978-48997 | None:intergenic | 60.0% | |
| !! | GAGGAGGGAGTGGTTTGGTG+GGG | - | tig0021982:49718-49737 | None:intergenic | 60.0% |
| !! | GGAGGAGGGAGTGGTTTGGT+GGG | - | tig0021982:49719-49738 | None:intergenic | 60.0% |
| GTTGGGAGGAGGGAGTGGTT+TGG | - | tig0021982:49723-49742 | None:intergenic | 60.0% | |
| ! | GCCTTGTTACTTGCTCGCGC+AGG | + | tig0021982:49751-49770 | Msa1396030:intron | 60.0% |
| !! | CGGTGTCGCCGTCGTCTTCA+CGG | + | tig0021982:46816-46835 | Msa1396030:CDS | 65.0% |
| GTGGCGACGGGAATGGGAAG+TGG | - | tig0021982:46912-46931 | None:intergenic | 65.0% | |
| TGAGGAAACGGCGGTGGCGA+CGG | - | tig0021982:46925-46944 | None:intergenic | 65.0% | |
| CGAAGGTGAGGAAACGGCGG+TGG | - | tig0021982:46931-46950 | None:intergenic | 65.0% | |
| CTCGAACGGCGAATCTCCGC+CGG | - | tig0021982:47187-47206 | None:intergenic | 65.0% | |
| ACTCGTTCCGTCGACGTCGC+CGG | + | tig0021982:47396-47415 | Msa1396030:CDS | 65.0% | |
| ! | GGGAGGAGGGAGTGGTTTGG+TGG | - | tig0021982:49720-49739 | None:intergenic | 65.0% |
| ACGGCGGTGGCGACGGGAAT+GGG | - | tig0021982:46918-46937 | None:intergenic | 70.0% | |
| AACGGCGGTGGCGACGGGAA+TGG | - | tig0021982:46919-46938 | None:intergenic | 70.0% | |
| GAGGAAACGGCGGTGGCGAC+GGG | - | tig0021982:46924-46943 | None:intergenic | 70.0% | |
| ! | ATTAGCGGTGGCGGTGGCGG+TGG | - | tig0021982:47065-47084 | None:intergenic | 70.0% |
| CGTTCCGTCGACGTCGCCGG+CGG | + | tig0021982:47399-47418 | Msa1396030:CDS | 75.0% | |
| ACCACCGCCGGCGACGTCGA+CGG | - | tig0021982:47406-47425 | None:intergenic | 75.0% | |
| ! | TCCGTCGACGTCGCCGGCGG+TGG | + | tig0021982:47402-47421 | Msa1396030:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021982 | gene | 46741 | 51334 | 46741 | ID=Msa1396030;Name=Msa1396030 |
| tig0021982 | mRNA | 46741 | 51334 | 46741 | ID=Msa1396030-mRNA-1;Parent=Msa1396030;Name=Msa1396030-mRNA-1;_AED=0.03;_eAED=0.03;_QI=56|1|1|1|1|1|3|176|337 |
| tig0021982 | exon | 46741 | 46950 | 46741 | ID=Msa1396030-mRNA-1:exon:15219;Parent=Msa1396030-mRNA-1 |
| tig0021982 | exon | 47035 | 47559 | 47035 | ID=Msa1396030-mRNA-1:exon:15220;Parent=Msa1396030-mRNA-1 |
| tig0021982 | exon | 50824 | 51334 | 50824 | ID=Msa1396030-mRNA-1:exon:15221;Parent=Msa1396030-mRNA-1 |
| tig0021982 | five_prime_UTR | 46741 | 46796 | 46741 | ID=Msa1396030-mRNA-1:five_prime_utr;Parent=Msa1396030-mRNA-1 |
| tig0021982 | CDS | 46797 | 46950 | 46797 | ID=Msa1396030-mRNA-1:cds;Parent=Msa1396030-mRNA-1 |
| tig0021982 | CDS | 47035 | 47559 | 47035 | ID=Msa1396030-mRNA-1:cds;Parent=Msa1396030-mRNA-1 |
| tig0021982 | CDS | 50824 | 51158 | 50824 | ID=Msa1396030-mRNA-1:cds;Parent=Msa1396030-mRNA-1 |
| tig0021982 | three_prime_UTR | 51159 | 51334 | 51159 | ID=Msa1396030-mRNA-1:three_prime_utr;Parent=Msa1396030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
