Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0371030 | XP_013444661.1 | 100.000 | 130 | 0 | 0 | 1 | 130 | 1 | 130 | 6.66e-89 | 264 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0371030 | sp|Q6T367|CENH3_ORYSJ | 61.468 | 109 | 42 | 0 | 17 | 125 | 52 | 160 | 2.19e-42 | 140 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0371030 | G8A083 | 100.000 | 130 | 0 | 0 | 1 | 130 | 1 | 130 | 3.18e-89 | 264 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001940 | Msa0371030 | 0.811960 | 5.389351e-51 | -8.615850e-47 |
| Msa0005890 | Msa0371030 | 0.847835 | 8.994957e-60 | -8.615850e-47 |
| Msa0017950 | Msa0371030 | 0.804796 | 1.819088e-49 | -8.615850e-47 |
| Msa0018000 | Msa0371030 | 0.809872 | 1.526683e-50 | -8.615850e-47 |
| Msa0021500 | Msa0371030 | 0.833384 | 5.500543e-56 | -8.615850e-47 |
| Msa0028420 | Msa0371030 | 0.862256 | 5.763653e-64 | -8.615850e-47 |
| Msa0030370 | Msa0371030 | 0.817507 | 3.182244e-52 | -8.615850e-47 |
| Msa0032920 | Msa0371030 | -0.830653 | 2.601769e-55 | -8.615850e-47 |
| Msa0032960 | Msa0371030 | -0.831695 | 1.442681e-55 | -8.615850e-47 |
| Msa0042610 | Msa0371030 | 0.809969 | 1.454754e-50 | -8.615850e-47 |
| Msa0043620 | Msa0371030 | 0.803141 | 4.016338e-49 | -8.615850e-47 |
| Msa0047030 | Msa0371030 | 0.803350 | 3.636191e-49 | -8.615850e-47 |
| Msa0048510 | Msa0371030 | 0.809532 | 1.806132e-50 | -8.615850e-47 |
| Msa0054690 | Msa0371030 | 0.826305 | 2.918526e-54 | -8.615850e-47 |
| Msa0074240 | Msa0371030 | 0.830469 | 2.885588e-55 | -8.615850e-47 |
| Msa0081520 | Msa0371030 | 0.841508 | 4.555478e-58 | -8.615850e-47 |
| Msa0081570 | Msa0371030 | 0.801698 | 7.963952e-49 | -8.615850e-47 |
| Msa0089630 | Msa0371030 | 0.834415 | 3.036673e-56 | -8.615850e-47 |
| Msa0092790 | Msa0371030 | 0.845789 | 3.262216e-59 | -8.615850e-47 |
| Msa0124060 | Msa0371030 | 0.855473 | 6.164042e-62 | -8.615850e-47 |
| Msa0124280 | Msa0371030 | 0.817747 | 2.808546e-52 | -8.615850e-47 |
| Msa0133280 | Msa0371030 | 0.805454 | 1.324290e-49 | -8.615850e-47 |
| Msa0157290 | Msa0371030 | 0.800438 | 1.441217e-48 | -8.615850e-47 |
| Msa0168500 | Msa0371030 | 0.860550 | 1.910003e-63 | -8.615850e-47 |
| Msa0173730 | Msa0371030 | 0.809153 | 2.178413e-50 | -8.615850e-47 |
| Msa0173810 | Msa0371030 | 0.804767 | 1.844363e-49 | -8.615850e-47 |
| Msa0173890 | Msa0371030 | 0.826839 | 2.175878e-54 | -8.615850e-47 |
| Msa0174450 | Msa0371030 | 0.802987 | 4.322093e-49 | -8.615850e-47 |
| Msa0178560 | Msa0371030 | 0.807965 | 3.906018e-50 | -8.615850e-47 |
| Msa0182190 | Msa0371030 | 0.807075 | 6.033604e-50 | -8.615850e-47 |
| Msa0182240 | Msa0371030 | 0.804891 | 1.737598e-49 | -8.615850e-47 |
| Msa0211150 | Msa0371030 | 0.806746 | 7.081934e-50 | -8.615850e-47 |
| Msa0213280 | Msa0371030 | 0.816409 | 5.613629e-52 | -8.615850e-47 |
| Msa0221000 | Msa0371030 | 0.834009 | 3.840360e-56 | -8.615850e-47 |
| Msa0223080 | Msa0371030 | 0.833736 | 4.492095e-56 | -8.615850e-47 |
| Msa0225100 | Msa0371030 | 0.821182 | 4.625367e-53 | -8.615850e-47 |
| Msa0225860 | Msa0371030 | 0.861570 | 9.352980e-64 | -8.615850e-47 |
| Msa0230750 | Msa0371030 | 0.802089 | 6.619569e-49 | -8.615850e-47 |
| Msa0369790 | Msa0371030 | 0.814836 | 1.257706e-51 | -8.615850e-47 |
| Msa0371030 | Msa0378720 | 0.853548 | 2.222418e-61 | -8.615850e-47 |
| Msa0371030 | Msa0386090 | 0.800212 | 1.602149e-48 | -8.615850e-47 |
| Msa0371030 | Msa0390970 | 0.800886 | 1.167711e-48 | -8.615850e-47 |
| Msa0371030 | Msa0392510 | 0.803402 | 3.546407e-49 | -8.615850e-47 |
| Msa0371030 | Msa0428370 | 0.822473 | 2.324955e-53 | -8.615850e-47 |
| Msa0371030 | Msa0430260 | 0.803632 | 3.177784e-49 | -8.615850e-47 |
| Msa0371030 | Msa0464000 | 0.812238 | 4.687337e-51 | -8.615850e-47 |
| Msa0371030 | Msa0467490 | 0.811732 | 6.043147e-51 | -8.615850e-47 |
| Msa0371030 | Msa0474730 | 0.844255 | 8.464755e-59 | -8.615850e-47 |
| Msa0371030 | Msa0476650 | 0.809095 | 2.241585e-50 | -8.615850e-47 |
| Msa0371030 | Msa0509550 | 0.814803 | 1.278896e-51 | -8.615850e-47 |
| Msa0371030 | Msa0530780 | 0.824186 | 9.251228e-54 | -8.615850e-47 |
| Msa0371030 | Msa0532070 | 0.806016 | 1.009262e-49 | -8.615850e-47 |
| Msa0371030 | Msa0547720 | 0.809059 | 2.281558e-50 | -8.615850e-47 |
| Msa0371030 | Msa0548470 | 0.800417 | 1.455723e-48 | -8.615850e-47 |
| Msa0371030 | Msa0569200 | 0.843014 | 1.818152e-58 | -8.615850e-47 |
| Msa0371030 | Msa0580370 | 0.863168 | 3.016913e-64 | -8.615850e-47 |
| Msa0371030 | Msa0581470 | 0.804339 | 2.265192e-49 | -8.615850e-47 |
| Msa0371030 | Msa0582480 | 0.800929 | 1.144547e-48 | -8.615850e-47 |
| Msa0371030 | Msa0583830 | 0.930334 | 1.906259e-93 | -8.615850e-47 |
| Msa0371030 | Msa0590830 | 0.812704 | 3.707726e-51 | -8.615850e-47 |
| Msa0371030 | Msa0597790 | 0.833984 | 3.894452e-56 | -8.615850e-47 |
| Msa0371030 | Msa0623330 | 0.809292 | 2.033180e-50 | -8.615850e-47 |
| Msa0371030 | Msa0624900 | 0.804374 | 2.227454e-49 | -8.615850e-47 |
| Msa0371030 | Msa0626450 | 0.834124 | 3.593459e-56 | -8.615850e-47 |
| Msa0371030 | Msa0626490 | 0.832791 | 7.727548e-56 | -8.615850e-47 |
| Msa0371030 | Msa0626510 | 0.822873 | 1.876421e-53 | -8.615850e-47 |
| Msa0371030 | Msa0637560 | 0.815716 | 8.015984e-52 | -8.615850e-47 |
| Msa0371030 | Msa0637580 | 0.812169 | 4.853461e-51 | -8.615850e-47 |
| Msa0371030 | Msa0638480 | 0.809331 | 1.995148e-50 | -8.615850e-47 |
| Msa0371030 | Msa0658640 | 0.819649 | 1.039278e-52 | -8.615850e-47 |
| Msa0371030 | Msa0661150 | 0.825250 | 5.192716e-54 | -8.615850e-47 |
| Msa0371030 | Msa0664600 | 0.832611 | 8.563665e-56 | -8.615850e-47 |
| Msa0371030 | Msa0677410 | 0.818325 | 2.079176e-52 | -8.615850e-47 |
| Msa0371030 | Msa0683570 | 0.812133 | 4.941896e-51 | -8.615850e-47 |
| Msa0371030 | Msa0697160 | 0.817474 | 3.236202e-52 | -8.615850e-47 |
| Msa0371030 | Msa0721080 | 0.821634 | 3.637077e-53 | -8.615850e-47 |
| Msa0371030 | Msa0735780 | 0.816402 | 5.633970e-52 | -8.615850e-47 |
| Msa0371030 | Msa0736960 | 0.807758 | 4.323329e-50 | -8.615850e-47 |
| Msa0371030 | Msa0741220 | 0.807126 | 5.886239e-50 | -8.615850e-47 |
| Msa0371030 | Msa0741240 | 0.827736 | 1.327208e-54 | -8.615850e-47 |
| Msa0371030 | Msa0765240 | 0.827059 | 1.928670e-54 | -8.615850e-47 |
| Msa0371030 | Msa0768990 | 0.801439 | 8.999010e-49 | -8.615850e-47 |
| Msa0371030 | Msa0778590 | 0.811223 | 7.795472e-51 | -8.615850e-47 |
| Msa0371030 | Msa0780270 | 0.803692 | 3.087730e-49 | -8.615850e-47 |
| Msa0371030 | Msa0795870 | 0.862731 | 4.117001e-64 | -8.615850e-47 |
| Msa0371030 | Msa0824450 | 0.810649 | 1.037881e-50 | -8.615850e-47 |
| Msa0371030 | Msa0833220 | 0.801262 | 9.783140e-49 | -8.615850e-47 |
| Msa0371030 | Msa0833650 | 0.858753 | 6.636740e-63 | -8.615850e-47 |
| Msa0371030 | Msa0835490 | 0.805050 | 1.609522e-49 | -8.615850e-47 |
| Msa0371030 | Msa0835960 | 0.801622 | 8.254207e-49 | -8.615850e-47 |
| Msa0371030 | Msa0861510 | 0.830077 | 3.597200e-55 | -8.615850e-47 |
| Msa0371030 | Msa0861600 | 0.831224 | 1.884774e-55 | -8.615850e-47 |
| Msa0371030 | Msa0861870 | 0.838609 | 2.598481e-57 | -8.615850e-47 |
| Msa0371030 | Msa0866520 | 0.821631 | 3.643570e-53 | -8.615850e-47 |
| Msa0371030 | Msa0873730 | 0.805768 | 1.138388e-49 | -8.615850e-47 |
| Msa0371030 | Msa0902510 | 0.806200 | 9.232244e-50 | -8.615850e-47 |
| Msa0371030 | Msa0902760 | 0.801447 | 8.963727e-49 | -8.615850e-47 |
| Msa0371030 | Msa0941190 | 0.815400 | 9.426069e-52 | -8.615850e-47 |
| Msa0371030 | Msa0944700 | 0.830086 | 3.579416e-55 | -8.615850e-47 |
| Msa0371030 | Msa0945110 | 0.820079 | 8.289975e-53 | -8.615850e-47 |
| Msa0371030 | Msa0967870 | 0.811273 | 7.604608e-51 | -8.615850e-47 |
| Msa0371030 | Msa0975300 | 0.806617 | 7.539612e-50 | -8.615850e-47 |
| Msa0371030 | Msa1013400 | 0.806198 | 9.242054e-50 | -8.615850e-47 |
| Msa0371030 | Msa1019430 | 0.826549 | 2.552605e-54 | -8.615850e-47 |
| Msa0371030 | Msa1019470 | 0.827832 | 1.257990e-54 | -8.615850e-47 |
| Msa0371030 | Msa1020510 | 0.807223 | 5.614134e-50 | -8.615850e-47 |
| Msa0371030 | Msa1020670 | 0.810171 | 1.315988e-50 | -8.615850e-47 |
| Msa0371030 | Msa1045140 | 0.836295 | 1.017373e-56 | -8.615850e-47 |
| Msa0371030 | Msa1048920 | 0.827755 | 1.313302e-54 | -8.615850e-47 |
| Msa0371030 | Msa1065390 | 0.803947 | 2.733166e-49 | -8.615850e-47 |
| Msa0371030 | Msa1066490 | 0.800679 | 1.287119e-48 | -8.615850e-47 |
| Msa0371030 | Msa1072940 | 0.810918 | 9.076527e-51 | -8.615850e-47 |
| Msa0371030 | Msa1078170 | 0.827430 | 1.571667e-54 | -8.615850e-47 |
| Msa0371030 | Msa1081390 | 0.800718 | 1.263512e-48 | -8.615850e-47 |
| Msa0371030 | Msa1084960 | 0.810144 | 1.333561e-50 | -8.615850e-47 |
| Msa0371030 | Msa1093530 | 0.802266 | 6.087088e-49 | -8.615850e-47 |
| Msa0371030 | Msa1093840 | 0.810195 | 1.300462e-50 | -8.615850e-47 |
| Msa0371030 | Msa1103990 | 0.855694 | 5.311732e-62 | -8.615850e-47 |
| Msa0371030 | Msa1123380 | 0.846661 | 1.887914e-59 | -8.615850e-47 |
| Msa0371030 | Msa1124110 | 0.804386 | 2.214935e-49 | -8.615850e-47 |
| Msa0371030 | Msa1132840 | 0.864440 | 1.214528e-64 | -8.615850e-47 |
| Msa0371030 | Msa1140210 | 0.813607 | 2.349340e-51 | -8.615850e-47 |
| Msa0371030 | Msa1145810 | 0.800634 | 1.314856e-48 | -8.615850e-47 |
| Msa0371030 | Msa1155170 | -0.809783 | 1.595237e-50 | -8.615850e-47 |
| Msa0371030 | Msa1160920 | 0.814584 | 1.430316e-51 | -8.615850e-47 |
| Msa0371030 | Msa1177320 | 0.929635 | 5.236072e-93 | -8.615850e-47 |
| Msa0371030 | Msa1186020 | 0.824889 | 6.319794e-54 | -8.615850e-47 |
| Msa0371030 | Msa1193290 | 0.804332 | 2.273329e-49 | -8.615850e-47 |
| Msa0371030 | Msa1199570 | 0.809134 | 2.198311e-50 | -8.615850e-47 |
| Msa0371030 | Msa1200890 | 0.825127 | 5.553585e-54 | -8.615850e-47 |
| Msa0371030 | Msa1206460 | 0.801148 | 1.032230e-48 | -8.615850e-47 |
| Msa0371030 | Msa1208430 | 0.803549 | 3.306741e-49 | -8.615850e-47 |
| Msa0371030 | Msa1209460 | 0.811376 | 7.222305e-51 | -8.615850e-47 |
| Msa0371030 | Msa1219000 | 0.800175 | 1.630250e-48 | -8.615850e-47 |
| Msa0371030 | Msa1221060 | 0.812764 | 3.598210e-51 | -8.615850e-47 |
| Msa0371030 | Msa1226520 | 0.821644 | 3.619101e-53 | -8.615850e-47 |
| Msa0371030 | Msa1236410 | 0.800348 | 1.503409e-48 | -8.615850e-47 |
| Msa0371030 | Msa1251930 | 0.803960 | 2.716239e-49 | -8.615850e-47 |
| Msa0371030 | Msa1276660 | 0.802081 | 6.644077e-49 | -8.615850e-47 |
| Msa0371030 | Msa1277150 | 0.814690 | 1.354638e-51 | -8.615850e-47 |
| Msa0371030 | Msa1297230 | 0.822116 | 2.812963e-53 | -8.615850e-47 |
| Msa0371030 | Msa1298370 | 0.819793 | 9.639140e-53 | -8.615850e-47 |
| Msa0371030 | Msa1303240 | 0.802372 | 5.789634e-49 | -8.615850e-47 |
| Msa0371030 | Msa1303250 | 0.821835 | 3.268120e-53 | -8.615850e-47 |
| Msa0371030 | Msa1328710 | 0.819578 | 1.079279e-52 | -8.615850e-47 |
| Msa0371030 | Msa1332760 | 0.812437 | 4.242671e-51 | -8.615850e-47 |
| Msa0371030 | Msa1343430 | 0.829466 | 5.067870e-55 | -8.615850e-47 |
| Msa0371030 | Msa1356830 | 0.828085 | 1.093532e-54 | -8.615850e-47 |
| Msa0371030 | Msa1359690 | 0.815567 | 8.651911e-52 | -8.615850e-47 |
| Msa0371030 | Msa1361400 | 0.810893 | 9.188095e-51 | -8.615850e-47 |
| Msa0371030 | Msa1361410 | 0.805418 | 1.347986e-49 | -8.615850e-47 |
| Msa0371030 | Msa1372230 | 0.817426 | 3.317728e-52 | -8.615850e-47 |
| Msa0371030 | Msa1373100 | 0.834254 | 3.333719e-56 | -8.615850e-47 |
| Msa0371030 | Msa1382560 | 0.803006 | 4.282433e-49 | -8.615850e-47 |
| Msa0371030 | Msa1390440 | 0.811219 | 7.809636e-51 | -8.615850e-47 |
| Msa0371030 | Msa1396030 | 0.820676 | 6.047860e-53 | -8.615850e-47 |
| Msa0371030 | Msa1397400 | 0.825441 | 4.678870e-54 | -8.615850e-47 |
| Msa0371030 | Msa1420950 | 0.805797 | 1.122176e-49 | -8.615850e-47 |
| Msa0371030 | Msa1422950 | 0.834151 | 3.536681e-56 | -8.615850e-47 |
| Msa0371030 | Msa1437940 | 0.814775 | 1.297702e-51 | -8.615850e-47 |
| Msa0371030 | Msa1440310 | 0.802613 | 5.163393e-49 | -8.615850e-47 |
| Msa0371030 | Msa1440880 | 0.849429 | 3.251441e-60 | -8.615850e-47 |
| Msa0371030 | Msa1440960 | 0.825950 | 3.544751e-54 | -8.615850e-47 |
| Msa0371030 | Msa1446810 | 0.838347 | 3.035119e-57 | -8.615850e-47 |
| Msa0371030 | Msa1446820 | 0.827557 | 1.464548e-54 | -8.615850e-47 |
| Msa0371030 | Msa1449480 | 0.804340 | 2.263793e-49 | -8.615850e-47 |
| Msa0371030 | Msa1451160 | 0.840440 | 8.684639e-58 | -8.615850e-47 |
| Msa0371030 | Msa1464810 | 0.805152 | 1.532604e-49 | -8.615850e-47 |
| Msa0371030 | Msa1465440 | 0.811593 | 6.477165e-51 | -8.615850e-47 |
| Msa0371030 | Msa1466920 | 0.822017 | 2.966833e-53 | -8.615850e-47 |
| Msa0239570 | Msa0371030 | 0.808070 | 3.710463e-50 | -8.615850e-47 |
| Msa0253700 | Msa0371030 | 0.826539 | 2.566537e-54 | -8.615850e-47 |
| Msa0260510 | Msa0371030 | 0.815723 | 7.988957e-52 | -8.615850e-47 |
| Msa0261340 | Msa0371030 | 0.812625 | 3.857774e-51 | -8.615850e-47 |
| Msa0266180 | Msa0371030 | 0.816215 | 6.202926e-52 | -8.615850e-47 |
| Msa0271880 | Msa0371030 | 0.808044 | 3.758512e-50 | -8.615850e-47 |
| Msa0277180 | Msa0371030 | 0.809569 | 1.773221e-50 | -8.615850e-47 |
| Msa0287740 | Msa0371030 | 0.828352 | 9.428840e-55 | -8.615850e-47 |
| Msa0292400 | Msa0371030 | 0.843523 | 1.329692e-58 | -8.615850e-47 |
| Msa0297790 | Msa0371030 | 0.801289 | 9.661572e-49 | -8.615850e-47 |
| Msa0298470 | Msa0371030 | 0.854867 | 9.246872e-62 | -8.615850e-47 |
| Msa0300270 | Msa0371030 | 0.828050 | 1.115185e-54 | -8.615850e-47 |
| Msa0300320 | Msa0371030 | 0.833213 | 6.066306e-56 | -8.615850e-47 |
| Msa0300690 | Msa0371030 | 0.806399 | 8.383804e-50 | -8.615850e-47 |
| Msa0300860 | Msa0371030 | 0.806845 | 6.747768e-50 | -8.615850e-47 |
| Msa0302160 | Msa0371030 | 0.829466 | 5.066211e-55 | -8.615850e-47 |
| Msa0302170 | Msa0371030 | 0.802124 | 6.509754e-49 | -8.615850e-47 |
| Msa0307270 | Msa0371030 | 0.810129 | 1.344062e-50 | -8.615850e-47 |
| Msa0310850 | Msa0371030 | 0.821255 | 4.450152e-53 | -8.615850e-47 |
| Msa0316810 | Msa0371030 | 0.815976 | 7.013555e-52 | -8.615850e-47 |
| Msa0330380 | Msa0371030 | 0.814980 | 1.168542e-51 | -8.615850e-47 |
| Msa0337700 | Msa0371030 | 0.834399 | 3.065645e-56 | -8.615850e-47 |
| Msa0339490 | Msa0371030 | 0.832065 | 1.169275e-55 | -8.615850e-47 |
| Msa0339500 | Msa0371030 | 0.848655 | 5.338579e-60 | -8.615850e-47 |
| Msa0340500 | Msa0371030 | 0.837319 | 5.576475e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0371030 | MtrunA17_Chr8g0347231 | 100.000 | 130 | 0 | 0 | 1 | 130 | 1 | 130 | 6.13e-93 | 264 |
| Msa0371030 | MtrunA17_Chr8g0388121 | 50.000 | 118 | 58 | 1 | 8 | 125 | 17 | 133 | 2.40e-32 | 111 |
| Msa0371030 | MtrunA17_Chr4g0054161 | 50.000 | 118 | 58 | 1 | 8 | 125 | 17 | 133 | 7.79e-32 | 109 |
| Msa0371030 | MtrunA17_Chr8g0363741 | 50.000 | 118 | 58 | 1 | 8 | 125 | 17 | 133 | 7.79e-32 | 109 |
| Msa0371030 | MtrunA17_Chr1g0156021 | 50.000 | 118 | 58 | 1 | 8 | 125 | 17 | 133 | 7.79e-32 | 109 |
| Msa0371030 | MtrunA17_Chr4g0054151 | 50.000 | 118 | 58 | 1 | 8 | 125 | 20 | 136 | 7.94e-32 | 109 |
| Msa0371030 | MtrunA17_Chr5g0410931 | 47.015 | 134 | 61 | 3 | 1 | 125 | 1 | 133 | 1.40e-30 | 106 |
| Msa0371030 | MtrunA17_Chr5g0410951 | 47.015 | 134 | 61 | 3 | 1 | 125 | 1 | 133 | 1.40e-30 | 106 |
| Msa0371030 | MtrunA17_Chr8g0383851 | 47.015 | 134 | 61 | 3 | 1 | 125 | 1 | 133 | 1.40e-30 | 106 |
| Msa0371030 | MtrunA17_Chr8g0383781 | 47.015 | 134 | 61 | 3 | 1 | 125 | 1 | 133 | 1.40e-30 | 106 |
| Msa0371030 | MtrunA17_Chr8g0390361 | 47.015 | 134 | 61 | 3 | 1 | 125 | 1 | 133 | 1.40e-30 | 106 |
| Msa0371030 | MtrunA17_Chr2g0295191 | 47.015 | 134 | 61 | 3 | 1 | 125 | 1 | 133 | 1.40e-30 | 106 |
| Msa0371030 | MtrunA17_Chr7g0237661 | 47.015 | 134 | 61 | 3 | 1 | 125 | 1 | 133 | 1.40e-30 | 106 |
| Msa0371030 | MtrunA17_Chr4g0033041 | 47.015 | 134 | 61 | 3 | 1 | 125 | 1 | 133 | 1.40e-30 | 106 |
| Msa0371030 | MtrunA17_Chr7g0218971 | 47.015 | 134 | 61 | 3 | 1 | 125 | 1 | 133 | 1.40e-30 | 106 |
| Msa0371030 | MtrunA17_Chr4g0046301 | 47.015 | 134 | 61 | 3 | 1 | 125 | 1 | 133 | 1.40e-30 | 106 |
| Msa0371030 | MtrunA17_Chr8g0364801 | 47.015 | 134 | 61 | 3 | 1 | 125 | 1 | 133 | 1.40e-30 | 106 |
| Msa0371030 | MtrunA17_Chr2g0319141 | 48.305 | 118 | 60 | 1 | 8 | 125 | 17 | 133 | 2.77e-30 | 105 |
| Msa0371030 | MtrunA17_Chr2g0319151 | 48.305 | 118 | 60 | 1 | 8 | 125 | 17 | 133 | 2.77e-30 | 105 |
| Msa0371030 | MtrunA17_Chr2g0319131 | 53.922 | 102 | 46 | 1 | 24 | 125 | 43 | 143 | 2.00e-29 | 103 |
| Msa0371030 | MtrunA17_Chr2g0319121 | 55.102 | 98 | 44 | 0 | 28 | 125 | 36 | 133 | 4.80e-29 | 102 |
| Msa0371030 | MtrunA17_Chr7g0222991 | 44.898 | 98 | 53 | 1 | 28 | 125 | 45 | 141 | 1.74e-23 | 89.0 |
| Msa0371030 | MtrunA17_Chr7g0218961 | 47.273 | 110 | 54 | 2 | 14 | 123 | 3 | 108 | 1.77e-23 | 87.8 |
| Msa0371030 | MtrunA17_Chr7g0223001 | 38.298 | 94 | 56 | 1 | 34 | 125 | 52 | 145 | 8.43e-19 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0371030 | AT1G01370.2 | 63.725 | 102 | 36 | 1 | 27 | 127 | 74 | 175 | 5.65e-41 | 134 |
| Msa0371030 | AT1G01370.1 | 63.725 | 102 | 36 | 1 | 27 | 127 | 74 | 175 | 5.65e-41 | 134 |
| Msa0371030 | AT1G01370.4 | 63.725 | 102 | 36 | 1 | 27 | 127 | 74 | 175 | 5.65e-41 | 134 |
| Msa0371030 | AT1G01370.3 | 63.725 | 102 | 36 | 1 | 27 | 127 | 74 | 175 | 5.65e-41 | 134 |
| Msa0371030 | AT4G40030.3 | 50.000 | 118 | 58 | 1 | 8 | 125 | 17 | 133 | 1.07e-31 | 109 |
| Msa0371030 | AT4G40030.1 | 50.000 | 118 | 58 | 1 | 8 | 125 | 17 | 133 | 1.07e-31 | 109 |
| Msa0371030 | AT4G40030.4 | 50.000 | 118 | 58 | 1 | 8 | 125 | 17 | 133 | 1.07e-31 | 109 |
| Msa0371030 | AT5G10980.1 | 50.000 | 118 | 58 | 1 | 8 | 125 | 17 | 133 | 1.07e-31 | 109 |
| Msa0371030 | AT4G40040.2 | 50.000 | 118 | 58 | 1 | 8 | 125 | 17 | 133 | 1.07e-31 | 109 |
| Msa0371030 | AT4G40040.3 | 50.000 | 118 | 58 | 1 | 8 | 125 | 17 | 133 | 1.07e-31 | 109 |
| Msa0371030 | AT4G40040.1 | 50.000 | 118 | 58 | 1 | 8 | 125 | 17 | 133 | 1.07e-31 | 109 |
| Msa0371030 | AT1G19890.1 | 55.102 | 98 | 43 | 1 | 28 | 125 | 38 | 134 | 1.16e-31 | 109 |
| Msa0371030 | AT4G40030.2 | 50.000 | 118 | 58 | 1 | 8 | 125 | 45 | 161 | 1.69e-31 | 110 |
| Msa0371030 | AT1G75600.1 | 50.000 | 118 | 58 | 1 | 8 | 125 | 17 | 133 | 3.34e-31 | 108 |
| Msa0371030 | AT1G09200.1 | 47.015 | 134 | 61 | 3 | 1 | 125 | 1 | 133 | 1.44e-30 | 107 |
| Msa0371030 | AT5G65360.1 | 47.015 | 134 | 61 | 3 | 1 | 125 | 1 | 133 | 1.44e-30 | 107 |
| Msa0371030 | AT5G10390.1 | 47.015 | 134 | 61 | 3 | 1 | 125 | 1 | 133 | 1.44e-30 | 107 |
| Msa0371030 | AT5G10400.1 | 47.015 | 134 | 61 | 3 | 1 | 125 | 1 | 133 | 1.44e-30 | 107 |
| Msa0371030 | AT3G27360.1 | 47.015 | 134 | 61 | 3 | 1 | 125 | 1 | 133 | 1.44e-30 | 107 |
| Msa0371030 | AT1G13370.1 | 55.208 | 96 | 42 | 1 | 28 | 123 | 37 | 131 | 3.30e-29 | 103 |
| Msa0371030 | AT5G65350.1 | 52.041 | 98 | 46 | 1 | 28 | 125 | 37 | 133 | 9.86e-29 | 102 |
| Msa0371030 | AT5G12910.1 | 54.082 | 98 | 44 | 1 | 28 | 125 | 32 | 128 | 2.79e-28 | 100 |
Find 37 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAATTTCAAATTAAAATT+AGG | 0.184055 | 3_1:-68924127 | Msa0371030:three_prime_UTR |
| TTTGGTTGTCTCAGTGAAAA+AGG | 0.239991 | 3_1:-68924272 | Msa0371030:intron |
| GAGTTGACCCGTAGGCTTAC+AGG | 0.284958 | 3_1:-68924244 | Msa0371030:CDS |
| TGAACCATCATTGTAGAAAA+AGG | 0.287523 | 3_1:-68924042 | Msa0371030:three_prime_UTR |
| TACCTCTTGAAGTGCTAATA+AGG | 0.302455 | 3_1:+68927216 | None:intergenic |
| TCGCGAAGCGCAACTGTTCC+TGG | 0.319244 | 3_1:+68929126 | None:intergenic |
| TCAAATTAAAATTAGGTACT+AGG | 0.337027 | 3_1:-68924120 | Msa0371030:three_prime_UTR |
| GATTACAAACCAACTATCTA+TGG | 0.360641 | 3_1:-68927263 | Msa0371030:CDS |
| GTAGGCAGCTGAGGAGCATC+TGG | 0.392268 | 3_1:-68925342 | Msa0371030:intron |
| CTGAGGAAAAGAAGAAAAGA+AGG | 0.420759 | 3_1:-68929155 | Msa0371030:CDS |
| ATCTGAACTTCGCGGTTCAA+TGG | 0.441543 | 3_1:-68929330 | Msa0371030:exon |
| CGAGATTCGTAAATTTCAAA+AGG | 0.441799 | 3_1:-68929106 | Msa0371030:CDS |
| GTGATACCTCCATAGATAGT+TGG | 0.459811 | 3_1:+68927254 | None:intergenic |
| ACCCGTAGGCTTACAGGAAT+AGG | 0.465693 | 3_1:-68924238 | Msa0371030:CDS |
| ATTCATGTATTTACTTGTTG+TGG | 0.477104 | 3_1:-68923941 | Msa0371030:three_prime_UTR |
| CATCTGGTTCGTATGTTTGA+GGG | 0.478828 | 3_1:-68925326 | Msa0371030:CDS |
| GCATCTGGTTCGTATGTTTG+AGG | 0.487530 | 3_1:-68925327 | Msa0371030:CDS |
| ATCCTATTCCTGTAAGCCTA+CGG | 0.499010 | 3_1:+68924236 | None:intergenic |
| GGTATCACGCTGGACGGCTG+AGG | 0.513698 | 3_1:-68927239 | Msa0371030:CDS |
| CTACGACGAGTGCGTTTACC+AGG | 0.516556 | 3_1:+68929284 | None:intergenic |
| GTCAAGCACATTCCACGTCC+TGG | 0.519981 | 3_1:-68929302 | Msa0371030:CDS |
| AAACTTACGCATCTAACAAA+CGG | 0.525872 | 3_1:+68929057 | None:intergenic |
| TCCTATTCCTGTAAGCCTAC+GGG | 0.528638 | 3_1:+68924237 | None:intergenic |
| AAGTCAAAATCTGAACTTCG+CGG | 0.537494 | 3_1:-68929338 | Msa0371030:five_prime_UTR |
| CGTCGTAGCAGTAGTAGTAA+TGG | 0.540770 | 3_1:-68929269 | Msa0371030:intron |
| TATATAGCAACAATCACTAC+AGG | 0.561553 | 3_1:+68924192 | None:intergenic |
| GAAAATCTTGTAGGCAGCTG+AGG | 0.568090 | 3_1:-68925351 | Msa0371030:intron |
| CTGGTTCGTATGTTTGAGGG+TGG | 0.577944 | 3_1:-68925323 | Msa0371030:CDS |
| CGAGTGCGTTTACCAGGACG+TGG | 0.589441 | 3_1:+68929290 | None:intergenic |
| TATGGAGGTATCACGCTGGA+CGG | 0.590985 | 3_1:-68927245 | Msa0371030:CDS |
| TTGGGGTATACAAGCAGCAA+TGG | 0.592465 | 3_1:+68924145 | None:intergenic |
| CATCTAACAAACGGAGCACA+AGG | 0.593820 | 3_1:+68929066 | None:intergenic |
| AAGAAAAGAAGGAATAGACC+AGG | 0.594091 | 3_1:-68929144 | Msa0371030:CDS |
| GGCCTTATTAGCACTTCAAG+AGG | 0.637546 | 3_1:-68927218 | Msa0371030:intron |
| AGGATCTTGAGTTGACCCGT+AGG | 0.666475 | 3_1:-68924252 | Msa0371030:CDS |
| TACAAACCAACTATCTATGG+AGG | 0.667342 | 3_1:-68927260 | Msa0371030:CDS |
| TATCTATGGAGGTATCACGC+TGG | 0.705952 | 3_1:-68927249 | Msa0371030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTATATTTTTTTAGTGTA+CGG | - | chr3_1:68924402-68924421 | Msa0371030:intron | 15.0% |
| !!! | CTTTAAGAGATATAAATAAT+TGG | - | chr3_1:68924576-68924595 | Msa0371030:intron | 15.0% |
| !! | GGTAATAAACTAATAATTTA+AGG | - | chr3_1:68924674-68924693 | Msa0371030:intron | 15.0% |
| !!! | CTTCATCTTAATTTTATATT+TGG | - | chr3_1:68925509-68925528 | Msa0371030:intron | 15.0% |
| !!! | TTTTTAAATTATGAAGAATC+CGG | - | chr3_1:68926142-68926161 | Msa0371030:intron | 15.0% |
| !! | TAAGAATCTATGAAATAAAA+CGG | + | chr3_1:68926168-68926187 | None:intergenic | 15.0% |
| !! | ACTGAAAATAAATAACATAA+AGG | - | chr3_1:68927471-68927490 | Msa0371030:intron | 15.0% |
| !! | CTGAAAATAAATAACATAAA+GGG | - | chr3_1:68927472-68927491 | Msa0371030:intron | 15.0% |
| !! | ATCTTAAATAGCTATTAAAA+AGG | - | chr3_1:68927825-68927844 | Msa0371030:intron | 15.0% |
| !! | AAATTAAATCAACTTACTAA+GGG | + | chr3_1:68928019-68928038 | None:intergenic | 15.0% |
| !! | AAAATTAAATCAACTTACTA+AGG | + | chr3_1:68928020-68928039 | None:intergenic | 15.0% |
| !!! | AATTAAAACCTAAAATGTTT+TGG | + | chr3_1:68928519-68928538 | None:intergenic | 15.0% |
| !!! | CAATTTTTATTAACATTAAC+AGG | - | chr3_1:68928687-68928706 | Msa0371030:intron | 15.0% |
| !!! | CTAATTTTAATTTGAAATTG+GGG | + | chr3_1:68929159-68929178 | None:intergenic | 15.0% |
| !!! | CCTAATTTTAATTTGAAATT+GGG | + | chr3_1:68929160-68929179 | None:intergenic | 15.0% |
| !!! | ACCTAATTTTAATTTGAAAT+TGG | + | chr3_1:68929161-68929180 | None:intergenic | 15.0% |
| !!! | TTTTTAATGTGCTGTTAATT+AGG | - | chr3_1:68924297-68924316 | Msa0371030:intron | 20.0% |
| !! | AAACTCTCTTAAATTATTAC+TGG | + | chr3_1:68924379-68924398 | None:intergenic | 20.0% |
| !!! | AGTAAAATTAATTTTGCATC+TGG | + | chr3_1:68924869-68924888 | None:intergenic | 20.0% |
| !!! | TGACATTTTTTTTATACAGA+TGG | - | chr3_1:68925085-68925104 | Msa0371030:intron | 20.0% |
| !! | AAAGTTCTTATAATTTCATG+TGG | + | chr3_1:68925563-68925582 | None:intergenic | 20.0% |
| !! | TTCTTATGTTAATGTTAGTT+TGG | - | chr3_1:68925582-68925601 | Msa0371030:intron | 20.0% |
| !! | AATTTCAACTTAATACAAAG+AGG | + | chr3_1:68925683-68925702 | None:intergenic | 20.0% |
| !!! | TTTTCCAAGTAATAACTTAT+GGG | + | chr3_1:68925818-68925837 | None:intergenic | 20.0% |
| !!! | ATTTTCCAAGTAATAACTTA+TGG | + | chr3_1:68925819-68925838 | None:intergenic | 20.0% |
| !!! | AAATTAAAGCAAAAAGCATA+GGG | + | chr3_1:68925983-68926002 | None:intergenic | 20.0% |
| !! | ATAATAGAACCATATGAAAA+AGG | + | chr3_1:68926099-68926118 | None:intergenic | 20.0% |
| !! | AGAAAATAAATCAATACCAA+CGG | + | chr3_1:68926767-68926786 | None:intergenic | 20.0% |
| !! | TTTCAGTAATAAATAGAGAA+GGG | + | chr3_1:68927458-68927477 | None:intergenic | 20.0% |
| !!! | TTTTCAGTAATAAATAGAGA+AGG | + | chr3_1:68927459-68927478 | None:intergenic | 20.0% |
| !! | ATCTGTTAGACTTTATATTA+TGG | + | chr3_1:68927519-68927538 | None:intergenic | 20.0% |
| !! | TTATGAATTGTGTATCTTAT+TGG | - | chr3_1:68927674-68927693 | Msa0371030:intron | 20.0% |
| !! | AAATAGCTATTAAAAAGGAA+CGG | - | chr3_1:68927830-68927849 | Msa0371030:intron | 20.0% |
| !! | AAGAAAAATTAACGAAAGAA+GGG | + | chr3_1:68927906-68927925 | None:intergenic | 20.0% |
| !! | AAAGAAAAATTAACGAAAGA+AGG | + | chr3_1:68927907-68927926 | None:intergenic | 20.0% |
| !! | CATTCATCATCAAAATAAAA+AGG | + | chr3_1:68928113-68928132 | None:intergenic | 20.0% |
| !! | AAATGTGATACCAAATTAAA+AGG | + | chr3_1:68928336-68928355 | None:intergenic | 20.0% |
| !! | TTTATCTAGAGGAAAATAAA+TGG | - | chr3_1:68928846-68928865 | Msa0371030:intron | 20.0% |
| !! | TCAAATAACAGATGTTAATA+AGG | + | chr3_1:68928989-68929008 | None:intergenic | 20.0% |
| !!! | ACATCTGTTATTTGATATTT+TGG | - | chr3_1:68928994-68929013 | Msa0371030:intron | 20.0% |
| !! | CCCAATTTCAAATTAAAATT+AGG | - | chr3_1:68929157-68929176 | Msa0371030:CDS | 20.0% |
| !! | TCAAATTAAAATTAGGTACT+AGG | - | chr3_1:68929164-68929183 | Msa0371030:CDS | 20.0% |
| !!! | GCAATGACAAAAATTGATTT+TGG | - | chr3_1:68924723-68924742 | Msa0371030:intron | 25.0% |
| !! | CAAAATTTGTTCTATATCTC+TGG | - | chr3_1:68924908-68924927 | Msa0371030:intron | 25.0% |
| !!! | TATATCTCTGGAATCAATTT+TGG | - | chr3_1:68924920-68924939 | Msa0371030:intron | 25.0% |
| !! | TTTGTAGTTGATATGAACTT+AGG | - | chr3_1:68925121-68925140 | Msa0371030:intron | 25.0% |
| !!! | ATTTTTTTGTGTGACTTGTA+TGG | - | chr3_1:68925218-68925237 | Msa0371030:intron | 25.0% |
| ! | AAATTAATTTCAACTAACGC+GGG | + | chr3_1:68925489-68925508 | None:intergenic | 25.0% |
| ! | GAAATTAATTTCAACTAACG+CGG | + | chr3_1:68925490-68925509 | None:intergenic | 25.0% |
| ! | ACTTGGAAAATAATTGAAAC+TGG | - | chr3_1:68925828-68925847 | Msa0371030:intron | 25.0% |
| ! | TCTAGAAGATAATTTACACT+TGG | - | chr3_1:68925880-68925899 | Msa0371030:intron | 25.0% |
| !! | TGTCATTTCAACAAATCATA+GGG | + | chr3_1:68925906-68925925 | None:intergenic | 25.0% |
| !! | ATGTCATTTCAACAAATCAT+AGG | + | chr3_1:68925907-68925926 | None:intergenic | 25.0% |
| !! | CAAATTAAAGCAAAAAGCAT+AGG | + | chr3_1:68925984-68926003 | None:intergenic | 25.0% |
| !! | TCAGTTTTTCATCTTTTATC+AGG | + | chr3_1:68926347-68926366 | None:intergenic | 25.0% |
| !! | TTATCATTTTCAATATCCGT+TGG | - | chr3_1:68926748-68926767 | Msa0371030:intron | 25.0% |
| !!! | GATTTATTTTCTCTTTCCTA+TGG | - | chr3_1:68926775-68926794 | Msa0371030:intron | 25.0% |
| ! | AATATAGCCATGTATACAAA+TGG | - | chr3_1:68926801-68926820 | Msa0371030:intron | 25.0% |
| ! | ATATAGCCATGTATACAAAT+GGG | - | chr3_1:68926802-68926821 | Msa0371030:intron | 25.0% |
| !!! | TTAAGATAGCTTGCTATATA+TGG | - | chr3_1:68926870-68926889 | Msa0371030:intron | 25.0% |
| ! | CAAAGATTAGAGAAATGATA+TGG | - | chr3_1:68927069-68927088 | Msa0371030:intron | 25.0% |
| !!! | ATATTGCTTTTAAGATTGGT+GGG | - | chr3_1:68927197-68927216 | Msa0371030:intron | 25.0% |
| !!! | TAGAAACTGACTTTTATTGA+TGG | - | chr3_1:68927253-68927272 | Msa0371030:CDS | 25.0% |
| ! | TAATAAATAGAGAAGGGAAA+GGG | + | chr3_1:68927452-68927471 | None:intergenic | 25.0% |
| ! | GAAAATTGAAAACACAGTTT+AGG | + | chr3_1:68927603-68927622 | None:intergenic | 25.0% |
| !!! | TTTTGAGATTACATTTCGTA+TGG | - | chr3_1:68927873-68927892 | Msa0371030:intron | 25.0% |
| !!! | TTTGTTGTTGAAAATCTTGT+AGG | - | chr3_1:68927924-68927943 | Msa0371030:intron | 25.0% |
| ! | ATCGATGAAAATAAAAACAG+GGG | + | chr3_1:68928052-68928071 | None:intergenic | 25.0% |
| ! | GATCGATGAAAATAAAAACA+GGG | + | chr3_1:68928053-68928072 | None:intergenic | 25.0% |
| ! | TGATCGATGAAAATAAAAAC+AGG | + | chr3_1:68928054-68928073 | None:intergenic | 25.0% |
| ! | AATATGTATACTAGAGAAAG+AGG | - | chr3_1:68928219-68928238 | Msa0371030:intron | 25.0% |
| ! | ATTAAAAGGATGGGAAATAA+TGG | + | chr3_1:68928322-68928341 | None:intergenic | 25.0% |
| !!! | TATTTCCCATCCTTTTAATT+TGG | - | chr3_1:68928323-68928342 | Msa0371030:intron | 25.0% |
| ! | TGATACCAAATTAAAAGGAT+GGG | + | chr3_1:68928331-68928350 | None:intergenic | 25.0% |
| ! | AATTGTCAACACAAGTTTAT+TGG | + | chr3_1:68928784-68928803 | None:intergenic | 25.0% |
| !!! | ACAGAGTTTTATTTATCTAG+AGG | - | chr3_1:68928835-68928854 | Msa0371030:intron | 25.0% |
| ! | CATGAAAATACTAGTCATAA+GGG | + | chr3_1:68928964-68928983 | None:intergenic | 25.0% |
| ! | ACATGAAAATACTAGTCATA+AGG | + | chr3_1:68928965-68928984 | None:intergenic | 25.0% |
| !! | AAATCCTTTTTCTACAATGA+TGG | + | chr3_1:68929249-68929268 | None:intergenic | 25.0% |
| !! | ATTCATGTATTTACTTGTTG+TGG | - | chr3_1:68929343-68929362 | Msa0371030:five_prime_UTR | 25.0% |
| !!! | AAAACGAGGGTTTTAGAAAT+TGG | + | chr3_1:68924047-68924066 | None:intergenic | 30.0% |
| ATGTGAAATTGTGAAAACGA+GGG | + | chr3_1:68924060-68924079 | None:intergenic | 30.0% | |
| AATGTGAAATTGTGAAAACG+AGG | + | chr3_1:68924061-68924080 | None:intergenic | 30.0% | |
| CGAGATTCGTAAATTTCAAA+AGG | - | chr3_1:68924178-68924197 | Msa0371030:three_prime_UTR | 30.0% | |
| AAACTTACGCATCTAACAAA+CGG | + | chr3_1:68924230-68924249 | None:intergenic | 30.0% | |
| !! | ATTAGGTTTTAGTAGTACCA+CGG | - | chr3_1:68924314-68924333 | Msa0371030:intron | 30.0% |
| GCGTTTATTATCGAAATTAC+AGG | - | chr3_1:68924825-68924844 | Msa0371030:intron | 30.0% | |
| ! | TGTATGTTTGGTTTCACTAT+CGG | + | chr3_1:68924951-68924970 | None:intergenic | 30.0% |
| TAACGAAGTTTGATATGTGT+AGG | + | chr3_1:68924996-68925015 | None:intergenic | 30.0% | |
| ! | ATTTCTTCGATTTGAAGTGT+GGG | - | chr3_1:68925035-68925054 | Msa0371030:intron | 30.0% |
| !! | GGAAAAGGAAAACTTGTTTT+TGG | - | chr3_1:68925145-68925164 | Msa0371030:intron | 30.0% |
| !! | ATTTTTCAACACGTACTTGT+TGG | - | chr3_1:68925320-68925339 | Msa0371030:CDS | 30.0% |
| ! | CCTTTTTACATAACTGATCA+TGG | + | chr3_1:68925614-68925633 | None:intergenic | 30.0% |
| CCATGATCAGTTATGTAAAA+AGG | - | chr3_1:68925611-68925630 | Msa0371030:intron | 30.0% | |
| !! | TTGCTTTAATTTGTGTCTGT+AGG | - | chr3_1:68925991-68926010 | Msa0371030:intron | 30.0% |
| GATTACAAACCAACTATCTA+TGG | - | chr3_1:68926021-68926040 | Msa0371030:intron | 30.0% | |
| !! | GGTATGTTACCTTTTTCATA+TGG | - | chr3_1:68926087-68926106 | Msa0371030:intron | 30.0% |
| AATCTATGAAATAAAACGGC+CGG | + | chr3_1:68926164-68926183 | None:intergenic | 30.0% | |
| TAGATTCTTACGAATTCAAC+AGG | - | chr3_1:68926178-68926197 | Msa0371030:intron | 30.0% | |
| GGACATGAAAGTAAATTGTA+TGG | + | chr3_1:68926287-68926306 | None:intergenic | 30.0% | |
| AACTTAGCTGGAAAAGTTAT+GGG | + | chr3_1:68926308-68926327 | None:intergenic | 30.0% | |
| TCACATACAAGGTAAGTTAA+GGG | + | chr3_1:68926567-68926586 | None:intergenic | 30.0% | |
| TTCACATACAAGGTAAGTTA+AGG | + | chr3_1:68926568-68926587 | None:intergenic | 30.0% | |
| AACTTACCTTGTATGTGAAA+AGG | - | chr3_1:68926569-68926588 | Msa0371030:intron | 30.0% | |
| !! | CAATCAAGTTTTATCCAAGA+AGG | - | chr3_1:68926639-68926658 | Msa0371030:intron | 30.0% |
| AAGGAAAATGTTTGAACAGA+TGG | + | chr3_1:68926671-68926690 | None:intergenic | 30.0% | |
| ACAATGAGGAAAAGAAACAA+AGG | + | chr3_1:68926690-68926709 | None:intergenic | 30.0% | |
| ! | ACATGGCTATATTTTTCCAT+AGG | + | chr3_1:68926794-68926813 | None:intergenic | 30.0% |
| AAGATTCCCATTTGTATACA+TGG | + | chr3_1:68926811-68926830 | None:intergenic | 30.0% | |
| !! | ATATATGGTGTCTTTTGACT+CGG | - | chr3_1:68926885-68926904 | Msa0371030:intron | 30.0% |
| ATCCAGATGATCTTAATCAT+AGG | - | chr3_1:68927137-68927156 | Msa0371030:intron | 30.0% | |
| !!! | AGCGATATTGCTTTTAAGAT+TGG | - | chr3_1:68927193-68927212 | Msa0371030:intron | 30.0% |
| !!! | GATATTGCTTTTAAGATTGG+TGG | - | chr3_1:68927196-68927215 | Msa0371030:intron | 30.0% |
| TCTTTGTAATGTCTGTAATC+AGG | + | chr3_1:68927301-68927320 | None:intergenic | 30.0% | |
| AGAGATAGAATATTGTCACA+AGG | - | chr3_1:68927344-68927363 | Msa0371030:intron | 30.0% | |
| AATAAATAGAGAAGGGAAAG+GGG | + | chr3_1:68927451-68927470 | None:intergenic | 30.0% | |
| GTAATAAATAGAGAAGGGAA+AGG | + | chr3_1:68927453-68927472 | None:intergenic | 30.0% | |
| ACTAGTAAGTGTATAAGTGA+AGG | - | chr3_1:68927736-68927755 | Msa0371030:intron | 30.0% | |
| CTAGTAAGTGTATAAGTGAA+GGG | - | chr3_1:68927737-68927756 | Msa0371030:intron | 30.0% | |
| ACGAAATGTAATCTCAAAAC+AGG | + | chr3_1:68927872-68927891 | None:intergenic | 30.0% | |
| ! | TGATGAATGAAGCTTTATCT+TGG | - | chr3_1:68928124-68928143 | Msa0371030:intron | 30.0% |
| ! | GTATACATATTACTGACTGT+AGG | + | chr3_1:68928210-68928229 | None:intergenic | 30.0% |
| GTGATACCAAATTAAAAGGA+TGG | + | chr3_1:68928332-68928351 | None:intergenic | 30.0% | |
| GAAATGCAGTTTACAGAATT+CGG | - | chr3_1:68928419-68928438 | Msa0371030:intron | 30.0% | |
| AATCTTCCGAATGAATGAAT+GGG | + | chr3_1:68928468-68928487 | None:intergenic | 30.0% | |
| ATGAATAGAGATGGCTAATA+GGG | + | chr3_1:68928621-68928640 | None:intergenic | 30.0% | |
| TATGAATAGAGATGGCTAAT+AGG | + | chr3_1:68928622-68928641 | None:intergenic | 30.0% | |
| !!! | ATTTTTGTGTTGTTTTCCTG+TGG | - | chr3_1:68928738-68928757 | Msa0371030:intron | 30.0% |
| !!! | TTTTTGTGTTGTTTTCCTGT+GGG | - | chr3_1:68928739-68928758 | Msa0371030:intron | 30.0% |
| TAAAACTCTGTTAGAGTCTT+CGG | + | chr3_1:68928826-68928845 | None:intergenic | 30.0% | |
| AGCAGAGACAAAATTATAAC+TGG | + | chr3_1:68928920-68928939 | None:intergenic | 30.0% | |
| TATATAGCAACAATCACTAC+AGG | + | chr3_1:68929095-68929114 | None:intergenic | 30.0% | |
| ! | TGTCAATAGCAATCTTTTGT+AGG | - | chr3_1:68929200-68929219 | Msa0371030:intron | 30.0% |
| TGAACCATCATTGTAGAAAA+AGG | - | chr3_1:68929242-68929261 | Msa0371030:intron | 30.0% | |
| AAGTCAAAATCTGAACTTCG+CGG | - | chr3_1:68923946-68923965 | Msa0371030:three_prime_UTR | 35.0% | |
| !! | TTTTTCAGCAAATGAGTCTG+AGG | - | chr3_1:68924112-68924131 | Msa0371030:three_prime_UTR | 35.0% |
| CTGAGGAAAAGAAGAAAAGA+AGG | - | chr3_1:68924129-68924148 | Msa0371030:three_prime_UTR | 35.0% | |
| AAGAAAAGAAGGAATAGACC+AGG | - | chr3_1:68924140-68924159 | Msa0371030:three_prime_UTR | 35.0% | |
| ATGTCAATTACTATCGTGTC+TGG | + | chr3_1:68924349-68924368 | None:intergenic | 35.0% | |
| GGCTGAAAGTGATTTATGTT+TGG | - | chr3_1:68924744-68924763 | Msa0371030:intron | 35.0% | |
| GAACACATGTAGTGTATGTT+TGG | + | chr3_1:68924963-68924982 | None:intergenic | 35.0% | |
| CAAACTTCGTTACATTTGAG+AGG | - | chr3_1:68925004-68925023 | Msa0371030:intron | 35.0% | |
| ! | CATTTCTTCGATTTGAAGTG+TGG | - | chr3_1:68925034-68925053 | Msa0371030:intron | 35.0% |
| ! | GTAGTTGATATGAACTTAGG+AGG | - | chr3_1:68925124-68925143 | Msa0371030:intron | 35.0% |
| GATATGAACTTAGGAGGAAA+AGG | - | chr3_1:68925130-68925149 | Msa0371030:intron | 35.0% | |
| ! | GACTTGTATGGCTTTTTATG+TGG | - | chr3_1:68925230-68925249 | Msa0371030:intron | 35.0% |
| TTTGATGAGCATGCTCTATA+TGG | - | chr3_1:68925257-68925276 | Msa0371030:intron | 35.0% | |
| CATGCTCTATATGGAAGTAA+TGG | - | chr3_1:68925266-68925285 | Msa0371030:intron | 35.0% | |
| TTGTCAAATAGCAGCTATAG+TGG | - | chr3_1:68925403-68925422 | Msa0371030:intron | 35.0% | |
| !! | GCTTTTCAATCAAAAGTGCA+TGG | + | chr3_1:68925794-68925813 | None:intergenic | 35.0% |
| AGCTCCCATAAGTTATTACT+TGG | - | chr3_1:68925811-68925830 | Msa0371030:intron | 35.0% | |
| GATTATTGAAGCTTCTCAAC+AGG | + | chr3_1:68925862-68925881 | None:intergenic | 35.0% | |
| ATGACATCCAGTCAAGTATT+TGG | - | chr3_1:68925920-68925939 | Msa0371030:intron | 35.0% | |
| ATTGGATGTTTGTTCTCACT+TGG | - | chr3_1:68925957-68925976 | Msa0371030:intron | 35.0% | |
| TACAAACCAACTATCTATGG+AGG | - | chr3_1:68926024-68926043 | Msa0371030:intron | 35.0% | |
| ! | TACCTCTTGAAGTGCTAATA+AGG | + | chr3_1:68926071-68926090 | None:intergenic | 35.0% |
| !!! | CACTTCTGTTTTTGGTTTCA+GGG | - | chr3_1:68926210-68926229 | Msa0371030:intron | 35.0% |
| CAACTTAGCTGGAAAAGTTA+TGG | + | chr3_1:68926309-68926328 | None:intergenic | 35.0% | |
| CTACTGAACAATAGCTAGAT+TGG | - | chr3_1:68926472-68926491 | Msa0371030:intron | 35.0% | |
| ! | TAGATTGGTTAACACAGTTC+TGG | - | chr3_1:68926487-68926506 | Msa0371030:intron | 35.0% |
| ATTACAATCGTGCATTGCAA+CGG | + | chr3_1:68926534-68926553 | None:intergenic | 35.0% | |
| TCTTAACTATCTCATGCAAC+TGG | + | chr3_1:68926856-68926875 | None:intergenic | 35.0% | |
| TGTTAAAGGATACTCGTGTT+TGG | - | chr3_1:68926915-68926934 | Msa0371030:intron | 35.0% | |
| GTTAAAGGATACTCGTGTTT+GGG | - | chr3_1:68926916-68926935 | Msa0371030:intron | 35.0% | |
| TTAAAGGATACTCGTGTTTG+GGG | - | chr3_1:68926917-68926936 | Msa0371030:intron | 35.0% | |
| ! | GGAGTACATTTTATAGCTCA+TGG | - | chr3_1:68926949-68926968 | Msa0371030:intron | 35.0% |
| GTAGCTGAGATGATATTTCA+GGG | - | chr3_1:68927039-68927058 | Msa0371030:intron | 35.0% | |
| AAGATCATCTGGATTGCTAA+AGG | + | chr3_1:68927131-68927150 | None:intergenic | 35.0% | |
| CTCCTATGATTAAGATCATC+TGG | + | chr3_1:68927142-68927161 | None:intergenic | 35.0% | |
| CAGATGATCTTAATCATAGG+AGG | - | chr3_1:68927140-68927159 | Msa0371030:intron | 35.0% | |
| AGCTGTCAAATTTCTTGGAT+AGG | + | chr3_1:68927375-68927394 | None:intergenic | 35.0% | |
| ATCCAAGAAATTTGACAGCT+TGG | - | chr3_1:68927375-68927394 | Msa0371030:intron | 35.0% | |
| GGATAGTTATTGAGTGGTTA+TGG | + | chr3_1:68927410-68927429 | None:intergenic | 35.0% | |
| GTTATGGGATAGTTATTGAG+TGG | + | chr3_1:68927416-68927435 | None:intergenic | 35.0% | |
| !! | ATTGTTTTCATCAAAGCGCT+TGG | - | chr3_1:68928278-68928297 | Msa0371030:intron | 35.0% |
| TAATGTACCCTCTCTTTACA+CGG | + | chr3_1:68928385-68928404 | None:intergenic | 35.0% | |
| CAATCTTCCGAATGAATGAA+TGG | + | chr3_1:68928469-68928488 | None:intergenic | 35.0% | |
| CATTCATTCATTCGGAAGAT+TGG | - | chr3_1:68928467-68928486 | Msa0371030:intron | 35.0% | |
| TTTGGTTGTCTCAGTGAAAA+AGG | - | chr3_1:68929012-68929031 | Msa0371030:intron | 35.0% | |
| ACTGACACAAACACCAGATA+CGG | - | chr3_1:68924641-68924660 | Msa0371030:intron | 40.0% | |
| GAAGCTTCTCAACAGGTATA+AGG | + | chr3_1:68925855-68925874 | None:intergenic | 40.0% | |
| AATGCAGCCAAATACTTGAC+TGG | + | chr3_1:68925930-68925949 | None:intergenic | 40.0% | |
| AGTCAAGTATTTGGCTGCAT+TGG | - | chr3_1:68925929-68925948 | Msa0371030:intron | 40.0% | |
| GTCAAGTATTTGGCTGCATT+GGG | - | chr3_1:68925930-68925949 | Msa0371030:intron | 40.0% | |
| GTGATACCTCCATAGATAGT+TGG | + | chr3_1:68926033-68926052 | None:intergenic | 40.0% | |
| ! | ATCCTTGGCACTTCTGTTTT+TGG | - | chr3_1:68926202-68926221 | Msa0371030:intron | 40.0% |
| !! | AACCAAAAACAGAAGTGCCA+AGG | + | chr3_1:68926207-68926226 | None:intergenic | 40.0% |
| !!! | GCACTTCTGTTTTTGGTTTC+AGG | - | chr3_1:68926209-68926228 | Msa0371030:intron | 40.0% |
| TTGGTTTCAGGGTAAACCAA+TGG | - | chr3_1:68926221-68926240 | Msa0371030:intron | 40.0% | |
| AAACCAATGGAAGAAGGAAG+TGG | - | chr3_1:68926234-68926253 | Msa0371030:intron | 40.0% | |
| AAGGAAGTGGAGTAAGTTGT+GGG | - | chr3_1:68926247-68926266 | Msa0371030:intron | 40.0% | |
| TTTCCAGCTAAGTTGCCAAA+AGG | - | chr3_1:68926314-68926333 | Msa0371030:intron | 40.0% | |
| ! | TTATCAGGTAAGCCTCCTTT+TGG | + | chr3_1:68926332-68926351 | None:intergenic | 40.0% |
| ! | GGTTAGTTGATGTTCAGTCA+TGG | - | chr3_1:68926508-68926527 | Msa0371030:intron | 40.0% |
| ! | AGATGGCCTTTTCACATACA+AGG | + | chr3_1:68926578-68926597 | None:intergenic | 40.0% |
| CTCAGACTGTAACTGTAAGA+TGG | + | chr3_1:68926595-68926614 | None:intergenic | 40.0% | |
| ACAGATGGAGAATTCCTTCT+TGG | + | chr3_1:68926656-68926675 | None:intergenic | 40.0% | |
| GAAGAAGCTTTCAGACAATG+AGG | + | chr3_1:68926704-68926723 | None:intergenic | 40.0% | |
| TAGCTCATGGATGTAGTATG+TGG | - | chr3_1:68926962-68926981 | Msa0371030:intron | 40.0% | |
| !! | GGATGTAGTATGTGGATTAG+TGG | - | chr3_1:68926970-68926989 | Msa0371030:intron | 40.0% |
| GCTCACTTGTACAAGGTTAA+CGG | - | chr3_1:68927017-68927036 | Msa0371030:intron | 40.0% | |
| GGTAGCTGAGATGATATTTC+AGG | - | chr3_1:68927038-68927057 | Msa0371030:intron | 40.0% | |
| AGAGAAATGATATGGCTGAC+AGG | - | chr3_1:68927077-68927096 | Msa0371030:intron | 40.0% | |
| ! | GGATTAGCAAGTGCTTTAGT+AGG | - | chr3_1:68927218-68927237 | Msa0371030:intron | 40.0% |
| GACCAAGCTGTCAAATTTCT+TGG | + | chr3_1:68927380-68927399 | None:intergenic | 40.0% | |
| ! | CATCTGGTTCGTATGTTTGA+GGG | - | chr3_1:68927958-68927977 | Msa0371030:intron | 40.0% |
| AACTGAAGTAGCGTAGTTGT+TGG | - | chr3_1:68928244-68928263 | Msa0371030:intron | 40.0% | |
| ACTGAAGTAGCGTAGTTGTT+GGG | - | chr3_1:68928245-68928264 | Msa0371030:intron | 40.0% | |
| TTACACGGTAAAGGCAATAG+TGG | + | chr3_1:68928370-68928389 | None:intergenic | 40.0% | |
| GGATCTCCCATTCATTCATT+CGG | - | chr3_1:68928459-68928478 | Msa0371030:intron | 40.0% | |
| ACCGTTCAATCAAGATTGGA+CGG | - | chr3_1:68928492-68928511 | Msa0371030:intron | 40.0% | |
| ACCGTCCAATCTTGATTGAA+CGG | + | chr3_1:68928496-68928515 | None:intergenic | 40.0% | |
| ! | TGGACGGTCCAAAACATTTT+AGG | - | chr3_1:68928508-68928527 | Msa0371030:intron | 40.0% |
| AGACGGTTTAGATTCAAGCT+CGG | + | chr3_1:68928562-68928581 | None:intergenic | 40.0% | |
| GCAACTCGTATGAATAGAGA+TGG | + | chr3_1:68928630-68928649 | None:intergenic | 40.0% | |
| TCTCTATTCATACGAGTTGC+AGG | - | chr3_1:68928630-68928649 | Msa0371030:intron | 40.0% | |
| GGAAAAGTTACGTCACTCTT+AGG | - | chr3_1:68928708-68928727 | Msa0371030:intron | 40.0% | |
| AATATGAAACTAGCTCCCAC+AGG | + | chr3_1:68928757-68928776 | None:intergenic | 40.0% | |
| ATCCTATTCCTGTAAGCCTA+CGG | + | chr3_1:68929051-68929070 | None:intergenic | 40.0% | |
| ATCTGAACTTCGCGGTTCAA+TGG | - | chr3_1:68923954-68923973 | Msa0371030:three_prime_UTR | 45.0% | |
| CGTCGTAGCAGTAGTAGTAA+TGG | - | chr3_1:68924015-68924034 | Msa0371030:three_prime_UTR | 45.0% | |
| CATCTAACAAACGGAGCACA+AGG | + | chr3_1:68924221-68924240 | None:intergenic | 45.0% | |
| GAGTCAACTACGTGTCTGTT+TGG | - | chr3_1:68924696-68924715 | Msa0371030:intron | 45.0% | |
| ! | TCTTCGATTTGAAGTGTGGG+TGG | - | chr3_1:68925038-68925057 | Msa0371030:intron | 45.0% |
| ! | TTGGCTGCATTGGGTCTTAT+TGG | - | chr3_1:68925939-68925958 | Msa0371030:intron | 45.0% |
| !! | TATCTATGGAGGTATCACGC+TGG | - | chr3_1:68926035-68926054 | Msa0371030:intron | 45.0% |
| !! | GGCCTTATTAGCACTTCAAG+AGG | - | chr3_1:68926066-68926085 | Msa0371030:intron | 45.0% |
| ACGAATTCAACAGGCATCCT+TGG | - | chr3_1:68926187-68926206 | Msa0371030:intron | 45.0% | |
| CAGGGTAAACCAATGGAAGA+AGG | - | chr3_1:68926228-68926247 | Msa0371030:intron | 45.0% | |
| ACTCCACTTCCTTCTTCCAT+TGG | + | chr3_1:68926240-68926259 | None:intergenic | 45.0% | |
| GAAGGAAGTGGAGTAAGTTG+TGG | - | chr3_1:68926246-68926265 | Msa0371030:intron | 45.0% | |
| AGGAAGTGGAGTAAGTTGTG+GGG | - | chr3_1:68926248-68926267 | Msa0371030:intron | 45.0% | |
| ! | GACTCGGAGTGTCTTGTTAA+AGG | - | chr3_1:68926901-68926920 | Msa0371030:intron | 45.0% |
| ! | TCGTGTTTGGGGTTGTTTGT+GGG | - | chr3_1:68926928-68926947 | Msa0371030:intron | 45.0% |
| AGTGCATGCTCACTTGTACA+AGG | - | chr3_1:68927010-68927029 | Msa0371030:intron | 45.0% | |
| TCATAGGAGGAATCCCAATC+TGG | - | chr3_1:68927153-68927172 | Msa0371030:intron | 45.0% | |
| CCACGATATCCTACCAGATT+GGG | + | chr3_1:68927169-68927188 | None:intergenic | 45.0% | |
| CCAATCTGGTAGGATATCGT+GGG | - | chr3_1:68927167-68927186 | Msa0371030:intron | 45.0% | |
| TAGAGAAGGGAAAGGGGAAA+GGG | + | chr3_1:68927445-68927464 | None:intergenic | 45.0% | |
| ATAGAGAAGGGAAAGGGGAA+AGG | + | chr3_1:68927446-68927465 | None:intergenic | 45.0% | |
| GAACTTAACAACTGCGACTG+TGG | + | chr3_1:68927625-68927644 | None:intergenic | 45.0% | |
| GAAAATCTTGTAGGCAGCTG+AGG | - | chr3_1:68927933-68927952 | Msa0371030:intron | 45.0% | |
| ! | GCATCTGGTTCGTATGTTTG+AGG | - | chr3_1:68927957-68927976 | Msa0371030:intron | 45.0% |
| TGCCTTTACCGTGTAAAGAG+AGG | - | chr3_1:68928374-68928393 | Msa0371030:intron | 45.0% | |
| GCCTTTACCGTGTAAAGAGA+GGG | - | chr3_1:68928375-68928394 | Msa0371030:intron | 45.0% | |
| ACCCTCTCTTTACACGGTAA+AGG | + | chr3_1:68928379-68928398 | None:intergenic | 45.0% | |
| GGTGACCGTTCAATCAAGAT+TGG | - | chr3_1:68928488-68928507 | Msa0371030:intron | 45.0% | |
| GAGCTTGAATCTAAACCGTC+TGG | - | chr3_1:68928561-68928580 | Msa0371030:intron | 45.0% | |
| TCTAAACCGTCTGGTATGTG+TGG | - | chr3_1:68928570-68928589 | Msa0371030:intron | 45.0% | |
| TCCTATTCCTGTAAGCCTAC+GGG | + | chr3_1:68929050-68929069 | None:intergenic | 45.0% | |
| TTGGGGTATACAAGCAGCAA+TGG | + | chr3_1:68929142-68929161 | None:intergenic | 45.0% | |
| !! | ACCAGATACGGCATCGACAT+TGG | - | chr3_1:68924653-68924672 | Msa0371030:intron | 50.0% |
| ACCAATGTCGATGCCGTATC+TGG | + | chr3_1:68924657-68924676 | None:intergenic | 50.0% | |
| !! | TATGGAGGTATCACGCTGGA+CGG | - | chr3_1:68926039-68926058 | Msa0371030:intron | 50.0% |
| ! | CCTCCTTTTGGCAACTTAGC+TGG | + | chr3_1:68926320-68926339 | None:intergenic | 50.0% |
| CCAGCTAAGTTGCCAAAAGG+AGG | - | chr3_1:68926317-68926336 | Msa0371030:intron | 50.0% | |
| GTCTGAAAGCTTCTTCCTCG+CGG | - | chr3_1:68926708-68926727 | Msa0371030:intron | 50.0% | |
| TCTGAAAGCTTCTTCCTCGC+GGG | - | chr3_1:68926709-68926728 | Msa0371030:intron | 50.0% | |
| ACTGGCATCTACAGTGAGAC+TGG | + | chr3_1:68926838-68926857 | None:intergenic | 50.0% | |
| ! | CTCGTGTTTGGGGTTGTTTG+TGG | - | chr3_1:68926927-68926946 | Msa0371030:intron | 50.0% |
| AGGAGGAATCCCAATCTGGT+AGG | - | chr3_1:68927157-68927176 | Msa0371030:intron | 50.0% | |
| CCCAATCTGGTAGGATATCG+TGG | - | chr3_1:68927166-68927185 | Msa0371030:intron | 50.0% | |
| CCCACGATATCCTACCAGAT+TGG | + | chr3_1:68927170-68927189 | None:intergenic | 50.0% | |
| GGGAAAGGGGAACTGGTTAT+GGG | + | chr3_1:68927431-68927450 | None:intergenic | 50.0% | |
| AGAGAAGGGAAAGGGGAAAG+GGG | + | chr3_1:68927444-68927463 | None:intergenic | 50.0% | |
| ! | CTGGTTCGTATGTTTGAGGG+TGG | - | chr3_1:68927961-68927980 | Msa0371030:intron | 50.0% |
| ATCCAGCTCTTTGCAGTCTC+TGG | + | chr3_1:68928598-68928617 | None:intergenic | 50.0% | |
| !! | AGGATCTTGAGTTGACCCGT+AGG | - | chr3_1:68929032-68929051 | Msa0371030:intron | 50.0% |
| ACCCGTAGGCTTACAGGAAT+AGG | - | chr3_1:68929046-68929065 | Msa0371030:intron | 50.0% | |
| GTCAAGCACATTCCACGTCC+TGG | - | chr3_1:68923982-68924001 | Msa0371030:three_prime_UTR | 55.0% | |
| CTACGACGAGTGCGTTTACC+AGG | + | chr3_1:68924003-68924022 | None:intergenic | 55.0% | |
| GTGTCTGGTGTCTATGTCCG+TGG | + | chr3_1:68924334-68924353 | None:intergenic | 55.0% | |
| GGGGAAAGGGGAACTGGTTA+TGG | + | chr3_1:68927432-68927451 | None:intergenic | 55.0% | |
| TTCGGATTCCCTGCAGTCAC+AGG | - | chr3_1:68928437-68928456 | Msa0371030:intron | 55.0% | |
| TCGGATTCCCTGCAGTCACA+GGG | - | chr3_1:68928438-68928457 | Msa0371030:intron | 55.0% | |
| !! | CTGGTGCCACACATACCAGA+CGG | + | chr3_1:68928579-68928598 | None:intergenic | 55.0% |
| CACCAGAGACTGCAAAGAGC+TGG | - | chr3_1:68928593-68928612 | Msa0371030:intron | 55.0% | |
| CGAGTTGCAGGAGATGTGCT+TGG | - | chr3_1:68928642-68928661 | Msa0371030:intron | 55.0% | |
| GAGTTGACCCGTAGGCTTAC+AGG | - | chr3_1:68929040-68929059 | Msa0371030:intron | 55.0% | |
| CGAGTGCGTTTACCAGGACG+TGG | + | chr3_1:68923997-68924016 | None:intergenic | 60.0% | |
| TCGCGAAGCGCAACTGTTCC+TGG | + | chr3_1:68924161-68924180 | None:intergenic | 60.0% | |
| GGGAAAGGGGAAAGGGGAAC+TGG | + | chr3_1:68927438-68927457 | None:intergenic | 60.0% | |
| !! | GTAGGCAGCTGAGGAGCATC+TGG | - | chr3_1:68927942-68927961 | Msa0371030:intron | 60.0% |
| GGGAGATCCCTGTGACTGCA+GGG | + | chr3_1:68928448-68928467 | None:intergenic | 60.0% | |
| TGGGAGATCCCTGTGACTGC+AGG | + | chr3_1:68928449-68928468 | None:intergenic | 60.0% | |
| GGTATCACGCTGGACGGCTG+AGG | - | chr3_1:68926045-68926064 | Msa0371030:intron | 65.0% | |
| GTTACGCAGCAAAGCCCGCG+AGG | + | chr3_1:68926726-68926745 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 68923915 | 68929391 | 68923915 | ID=Msa0371030;Name=Msa0371030 |
| chr3_1 | mRNA | 68923915 | 68929391 | 68923915 | ID=Msa0371030-mRNA-1;Parent=Msa0371030;Name=Msa0371030-mRNA-1;_AED=0.08;_eAED=0.08;_QI=58|1|1|1|1|1|5|310|130 |
| chr3_1 | exon | 68923915 | 68924280 | 68923915 | ID=Msa0371030-mRNA-1:exon:14636;Parent=Msa0371030-mRNA-1 |
| chr3_1 | exon | 68925285 | 68925360 | 68925285 | ID=Msa0371030-mRNA-1:exon:14635;Parent=Msa0371030-mRNA-1 |
| chr3_1 | exon | 68927219 | 68927293 | 68927219 | ID=Msa0371030-mRNA-1:exon:14634;Parent=Msa0371030-mRNA-1 |
| chr3_1 | exon | 68929065 | 68929186 | 68929065 | ID=Msa0371030-mRNA-1:exon:14633;Parent=Msa0371030-mRNA-1 |
| chr3_1 | exon | 68929270 | 68929391 | 68929270 | ID=Msa0371030-mRNA-1:exon:14632;Parent=Msa0371030-mRNA-1 |
| chr3_1 | five_prime_UTR | 68929334 | 68929391 | 68929334 | ID=Msa0371030-mRNA-1:five_prime_utr;Parent=Msa0371030-mRNA-1 |
| chr3_1 | CDS | 68929270 | 68929333 | 68929270 | ID=Msa0371030-mRNA-1:cds;Parent=Msa0371030-mRNA-1 |
| chr3_1 | CDS | 68929065 | 68929186 | 68929065 | ID=Msa0371030-mRNA-1:cds;Parent=Msa0371030-mRNA-1 |
| chr3_1 | CDS | 68927219 | 68927293 | 68927219 | ID=Msa0371030-mRNA-1:cds;Parent=Msa0371030-mRNA-1 |
| chr3_1 | CDS | 68925285 | 68925360 | 68925285 | ID=Msa0371030-mRNA-1:cds;Parent=Msa0371030-mRNA-1 |
| chr3_1 | CDS | 68924225 | 68924280 | 68924225 | ID=Msa0371030-mRNA-1:cds;Parent=Msa0371030-mRNA-1 |
| chr3_1 | three_prime_UTR | 68923915 | 68924224 | 68923915 | ID=Msa0371030-mRNA-1:three_prime_utr;Parent=Msa0371030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
