Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041490 | XP_013450304.2 | 94.149 | 376 | 19 | 1 | 1 | 373 | 1 | 376 | 0.0 | 714 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041490 | sp|Q8DHV7|PRMC_THEVB | 35.216 | 301 | 177 | 6 | 70 | 370 | 6 | 288 | 1.23e-53 | 182 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041490 | A0A396H6K0 | 94.149 | 376 | 19 | 1 | 1 | 373 | 1 | 376 | 0.0 | 714 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa1041490 | 0.829244 | 5.738373e-55 | -8.615850e-47 |
| Msa0640880 | Msa1041490 | 0.811811 | 5.807413e-51 | -8.615850e-47 |
| Msa0642650 | Msa1041490 | 0.842139 | 3.102879e-58 | -8.615850e-47 |
| Msa0681890 | Msa1041490 | 0.824223 | 9.069689e-54 | -8.615850e-47 |
| Msa0703760 | Msa1041490 | 0.803509 | 3.369955e-49 | -8.615850e-47 |
| Msa0717090 | Msa1041490 | 0.801493 | 8.775012e-49 | -8.615850e-47 |
| Msa0139900 | Msa1041490 | 0.800001 | 1.768992e-48 | -8.615850e-47 |
| Msa0146470 | Msa1041490 | 0.827630 | 1.407011e-54 | -8.615850e-47 |
| Msa0157020 | Msa1041490 | 0.813752 | 2.183339e-51 | -8.615850e-47 |
| Msa0417630 | Msa1041490 | 0.815077 | 1.112223e-51 | -8.615850e-47 |
| Msa0469910 | Msa1041490 | -0.805800 | 1.120677e-49 | -8.615850e-47 |
| Msa0990520 | Msa1041490 | 0.812510 | 4.088336e-51 | -8.615850e-47 |
| Msa0992590 | Msa1041490 | 0.810275 | 1.249855e-50 | -8.615850e-47 |
| Msa1002040 | Msa1041490 | 0.815198 | 1.045039e-51 | -8.615850e-47 |
| Msa1004500 | Msa1041490 | 0.813091 | 3.050693e-51 | -8.615850e-47 |
| Msa1041490 | Msa1044340 | 0.800965 | 1.124913e-48 | -8.615850e-47 |
| Msa1041490 | Msa1045970 | 0.800822 | 1.203181e-48 | -8.615850e-47 |
| Msa1041490 | Msa1046870 | 0.811259 | 7.654525e-51 | -8.615850e-47 |
| Msa1041490 | Msa1081410 | 0.908700 | 1.282695e-81 | -8.615850e-47 |
| Msa1041490 | Msa1126720 | 0.901106 | 3.745991e-78 | -8.615850e-47 |
| Msa1041490 | Msa1149760 | 0.808623 | 2.827522e-50 | -8.615850e-47 |
| Msa1041490 | Msa1200920 | 0.803440 | 3.483469e-49 | -8.615850e-47 |
| Msa1041490 | Msa1223840 | 0.806062 | 9.873068e-50 | -8.615850e-47 |
| Msa1041490 | Msa1235890 | 0.812620 | 3.868645e-51 | -8.615850e-47 |
| Msa1041490 | Msa1315980 | 0.807169 | 5.762914e-50 | -8.615850e-47 |
| Msa1041490 | Msa1354040 | 0.815168 | 1.061588e-51 | -8.615850e-47 |
| Msa1041490 | Msa1402500 | 0.868012 | 8.956672e-66 | -8.615850e-47 |
| Msa1041490 | Msa1449180 | 0.842814 | 2.054852e-58 | -8.615850e-47 |
| Msa1041490 | Msa1456650 | 0.804185 | 2.438471e-49 | -8.615850e-47 |
| Msa0274780 | Msa1041490 | 0.806063 | 9.868340e-50 | -8.615850e-47 |
| Msa0524090 | Msa1041490 | 0.800625 | 1.320228e-48 | -8.615850e-47 |
| Msa0524120 | Msa1041490 | 0.802802 | 4.719875e-49 | -8.615850e-47 |
| Msa0600390 | Msa1041490 | 0.809107 | 2.228067e-50 | -8.615850e-47 |
| Msa0925160 | Msa1041490 | 0.810361 | 1.197761e-50 | -8.615850e-47 |
| Msa0955260 | Msa1041490 | 0.801100 | 1.055709e-48 | -8.615850e-47 |
| Msa0972730 | Msa1041490 | 0.816697 | 4.837339e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041490 | MtrunA17_Chr7g0268401 | 94.149 | 376 | 19 | 1 | 1 | 373 | 1 | 376 | 0.0 | 714 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041490 | AT5G64150.1 | 58.333 | 372 | 133 | 5 | 23 | 372 | 5 | 376 | 6.06e-154 | 439 |
Find 108 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGGGGTTTGGGCTGATTT+AGG | 0.146720 | 7_1:-79065743 | Msa1041490:CDS |
| TTAAATTACAAAATACAATT+TGG | 0.242425 | 7_1:-79062549 | Msa1041490:three_prime_UTR |
| AAGTGCAAGCTTATGCAATT+TGG | 0.249075 | 7_1:-79062633 | Msa1041490:CDS |
| GGTATTCAAAGATTTGTAAT+TGG | 0.253916 | 7_1:-79062590 | Msa1041490:CDS |
| CCTGTGGCTGTTGCTGTTGC+AGG | 0.260902 | 7_1:-79065641 | Msa1041490:CDS |
| GAGGGGTTTGGGCTGATTTA+GGG | 0.279292 | 7_1:-79065742 | Msa1041490:CDS |
| GACTGAACTTATTGTTGATT+TGG | 0.280857 | 7_1:-79065801 | Msa1041490:CDS |
| GGAGAGATGGACCTCTTAAA+TGG | 0.288591 | 7_1:+79062468 | None:intergenic |
| AATGGAAAGGTAGAAACTTA+TGG | 0.299888 | 7_1:+79066326 | None:intergenic |
| GCAAAGAAATATACGTGTTA+AGG | 0.299971 | 7_1:+79066408 | None:intergenic |
| CTCTTCTCCATCTGTGTGAT+GGG | 0.315925 | 7_1:-79064797 | Msa1041490:CDS |
| ATTTCTTTACTAGGTATATA+AGG | 0.321425 | 7_1:+79064894 | None:intergenic |
| ATTTGAGTTCTTTAATCATT+TGG | 0.335481 | 7_1:+79062399 | None:intergenic |
| TTAGTTTCATTTCAAGAGAA+TGG | 0.339544 | 7_1:+79066308 | None:intergenic |
| TGTTCAAAGGTATTCTTTGC+AGG | 0.342417 | 7_1:-79065612 | Msa1041490:intron |
| TTTGAGTTCCCTGCACAAAA+TGG | 0.347920 | 7_1:+79066042 | None:intergenic |
| AGGATTTGAAAAGAGGGGTT+TGG | 0.358688 | 7_1:-79065754 | Msa1041490:CDS |
| GGATTTGAAAAGAGGGGTTT+GGG | 0.359508 | 7_1:-79065753 | Msa1041490:CDS |
| TGGTGGATTCTTTGCCTTTG+AGG | 0.362032 | 7_1:-79064754 | Msa1041490:intron |
| AAGAATGAGGATTTGAAAAG+AGG | 0.374020 | 7_1:-79065761 | Msa1041490:CDS |
| GTTGGAACCATTGAAGGATA+TGG | 0.381607 | 7_1:-79064949 | Msa1041490:CDS |
| GGAAGTGGTGCTCTTGCTAT+TGG | 0.389038 | 7_1:-79065716 | Msa1041490:CDS |
| ATGGAAAGGTAGAAACTTAT+GGG | 0.392567 | 7_1:+79066327 | None:intergenic |
| CCAGGGGTTCGATCTCATAT+TGG | 0.394350 | 7_1:+79062422 | None:intergenic |
| TCTCGTTATCATCACCCATA+TGG | 0.399896 | 7_1:+79065975 | None:intergenic |
| TATAGGACAAAATTGAACTA+AGG | 0.412570 | 7_1:-79064983 | Msa1041490:intron |
| CAAAGAAATATACGTGTTAA+GGG | 0.414757 | 7_1:+79066409 | None:intergenic |
| TGAGAAGTTGTGATTTGTTA+AGG | 0.421647 | 7_1:+79066285 | None:intergenic |
| GAACCTAGAGCTGCATTAGA+TGG | 0.429340 | 7_1:-79064840 | Msa1041490:CDS |
| GCTCTTCTCCATCTGTGTGA+TGG | 0.430712 | 7_1:-79064798 | Msa1041490:CDS |
| TAGAGGAACTATATTGTTTG+TGG | 0.431806 | 7_1:-79065931 | Msa1041490:CDS |
| CTCTTGCTATTGGCATTGGT+AGG | 0.433770 | 7_1:-79065706 | Msa1041490:CDS |
| TGATAATGATGAAGAACAAA+AGG | 0.442696 | 7_1:+79066225 | None:intergenic |
| CGTGTTAAGGGTTAATCAAA+AGG | 0.444723 | 7_1:+79066421 | None:intergenic |
| ATAAGTTCAGTCTCGGGTCT+AGG | 0.448304 | 7_1:+79065812 | None:intergenic |
| GAATGGTGCTTGCCTGTTTG+AGG | 0.452191 | 7_1:+79066479 | None:intergenic |
| TCTCCTTCCATATCCTTCAA+TGG | 0.455649 | 7_1:+79064942 | None:intergenic |
| AGTTCTTTAATCATTTGGCC+AGG | 0.460926 | 7_1:+79062404 | None:intergenic |
| AAACCAGGGATTTCTTTACT+AGG | 0.465462 | 7_1:+79064885 | None:intergenic |
| CATCCAACTATATATTGAAA+AGG | 0.469078 | 7_1:+79065884 | None:intergenic |
| AGAATGAGGATTTGAAAAGA+GGG | 0.470097 | 7_1:-79065760 | Msa1041490:CDS |
| ATCAACAATAAGTTCAGTCT+CGG | 0.472440 | 7_1:+79065805 | None:intergenic |
| TGATGTTGTTTCAAAGAATG+AGG | 0.473095 | 7_1:-79065774 | Msa1041490:CDS |
| ATGTGAGCATTGGAAGGATC+TGG | 0.474327 | 7_1:-79065864 | Msa1041490:CDS |
| CTGCACAAAATGGTTGAGTC+TGG | 0.476906 | 7_1:+79066052 | None:intergenic |
| CAACCGTGACAACCTCAAAC+AGG | 0.478915 | 7_1:-79066491 | Msa1041490:five_prime_UTR |
| ATCGTGGTTGGAACCATTGA+AGG | 0.481564 | 7_1:-79064955 | Msa1041490:CDS |
| GAAAATGAAGGCAGATATAG+AGG | 0.483718 | 7_1:-79065948 | Msa1041490:CDS |
| TGCTGTGAAGTGAAGTGGTC+AGG | 0.485123 | 7_1:+79066515 | None:intergenic |
| CTCGTTATCATCACCCATAT+GGG | 0.486994 | 7_1:+79065976 | None:intergenic |
| CCAACTTCAGCTTGTAAACC+AGG | 0.490862 | 7_1:+79064870 | None:intergenic |
| GATATGGAAGGAGAGCTTGC+AGG | 0.490970 | 7_1:-79064933 | Msa1041490:CDS |
| GTAGTTGAGATCCATTTAAG+AGG | 0.491201 | 7_1:-79062479 | Msa1041490:three_prime_UTR |
| AAAACATATATTTGGAGAGA+TGG | 0.491346 | 7_1:+79062455 | None:intergenic |
| AAATACAATTTGGTAAACTA+AGG | 0.494267 | 7_1:-79062539 | Msa1041490:three_prime_UTR |
| GCATTAGATGGAGGCATTGA+CGG | 0.498672 | 7_1:-79064828 | Msa1041490:CDS |
| TATATTGTTTGTGGAAGCAA+AGG | 0.499336 | 7_1:-79065922 | Msa1041490:CDS |
| GTTTGGGCTGATTTAGGGAC+TGG | 0.499341 | 7_1:-79065737 | Msa1041490:CDS |
| TCTTGCTATTGGCATTGGTA+GGG | 0.505840 | 7_1:-79065705 | Msa1041490:CDS |
| GGTGCTCTTGCTATTGGCAT+TGG | 0.506195 | 7_1:-79065710 | Msa1041490:CDS |
| CTGTTTGAGGTTGTCACGGT+TGG | 0.506971 | 7_1:+79066492 | None:intergenic |
| GCTGATTTAGGGACTGGAAG+TGG | 0.510435 | 7_1:-79065731 | Msa1041490:CDS |
| TATCGTTGTCTTGTCGCGAA+TGG | 0.513618 | 7_1:+79066462 | None:intergenic |
| TTCTTTAATCATTTGGCCAG+GGG | 0.514179 | 7_1:+79062406 | None:intergenic |
| CCTCCATCTAATGCAGCTCT+AGG | 0.520472 | 7_1:+79064837 | None:intergenic |
| CCTGGTTTACAAGCTGAAGT+TGG | 0.522001 | 7_1:-79064870 | Msa1041490:CDS |
| ATAGGACAAAATTGAACTAA+GGG | 0.525603 | 7_1:-79064982 | Msa1041490:intron |
| CCAATATGAGATCGAACCCC+TGG | 0.528026 | 7_1:-79062422 | Msa1041490:three_prime_UTR |
| TGCGTCAGATTTAAGTCCTG+TGG | 0.529162 | 7_1:-79065657 | Msa1041490:CDS |
| GAATGAGGATTTGAAAAGAG+GGG | 0.534849 | 7_1:-79065759 | Msa1041490:CDS |
| TCAACAATAAGTTCAGTCTC+GGG | 0.535769 | 7_1:+79065806 | None:intergenic |
| ATCTTGTCATTACAGACAAA+CGG | 0.539032 | 7_1:-79062701 | Msa1041490:intron |
| CTTTACTAGGTATATAAGGT+GGG | 0.543420 | 7_1:+79064898 | None:intergenic |
| TCTTTACTAGGTATATAAGG+TGG | 0.544514 | 7_1:+79064897 | None:intergenic |
| ATATAGTTGGATGTGAGCAT+TGG | 0.548726 | 7_1:-79065874 | Msa1041490:CDS |
| TTCAACTGAGTTATGCTCAC+AGG | 0.550809 | 7_1:-79066539 | None:intergenic |
| GGAAGCAAAGGATTGAAGAA+AGG | 0.552507 | 7_1:-79065910 | Msa1041490:CDS |
| GACAAAATTGAACTAAGGGA+AGG | 0.563320 | 7_1:-79064978 | Msa1041490:CDS |
| AATCAGCCCCATCACACAGA+TGG | 0.567470 | 7_1:+79064790 | None:intergenic |
| CAAACGGTGAGAAGCAGTGT+AGG | 0.568282 | 7_1:-79062685 | Msa1041490:CDS |
| AGATGGAGGCATTGACGGCA+TGG | 0.569695 | 7_1:-79064823 | Msa1041490:CDS |
| TTGCCTGTTTGAGGTTGTCA+CGG | 0.570507 | 7_1:+79066488 | None:intergenic |
| CCTGCAACAGCAACAGCCAC+AGG | 0.572564 | 7_1:+79065641 | None:intergenic |
| TAACGAGAGGGTGAAAATGA+AGG | 0.574425 | 7_1:-79065960 | Msa1041490:CDS |
| TTGCAGGTTACAATGTTCAA+AGG | 0.574872 | 7_1:-79065625 | Msa1041490:CDS |
| GATAATGATGAAGAACAAAA+GGG | 0.575128 | 7_1:+79066226 | None:intergenic |
| GTTCTTTAATCATTTGGCCA+GGG | 0.581424 | 7_1:+79062405 | None:intergenic |
| ATACCTAGTAAAGAAATCCC+TGG | 0.585711 | 7_1:-79064888 | Msa1041490:CDS |
| AGTCTCTGTAGTTGCGTGCG+AGG | 0.597816 | 7_1:+79062513 | None:intergenic |
| ACTAAGGGAAGGATCGTGGT+TGG | 0.600071 | 7_1:-79064967 | Msa1041490:CDS |
| GATTTAATGTTGAAACCTGG+TGG | 0.601736 | 7_1:-79064771 | Msa1041490:CDS |
| CTACAGAGACTAATCTCTTG+AGG | 0.608331 | 7_1:-79062501 | Msa1041490:three_prime_UTR |
| AGTTGGATGTGAGCATTGGA+AGG | 0.610910 | 7_1:-79065870 | Msa1041490:CDS |
| CAACTTCAGCTTGTAAACCA+GGG | 0.612273 | 7_1:+79064871 | None:intergenic |
| TTCATTTCAAGAGAATGGAA+AGG | 0.617883 | 7_1:+79066313 | None:intergenic |
| AAACGGTGAGAAGCAGTGTA+GGG | 0.618574 | 7_1:-79062684 | Msa1041490:CDS |
| TTGAACTAAGGGAAGGATCG+TGG | 0.632197 | 7_1:-79064971 | Msa1041490:CDS |
| CCTAGAGCTGCATTAGATGG+AGG | 0.633012 | 7_1:-79064837 | Msa1041490:CDS |
| GAACCATTGAAGGATATGGA+AGG | 0.635010 | 7_1:-79064945 | Msa1041490:CDS |
| TCAAAGGCAAAGAATCCACC+AGG | 0.637225 | 7_1:+79064756 | None:intergenic |
| TCTTCTCCATCTGTGTGATG+GGG | 0.643897 | 7_1:-79064796 | Msa1041490:CDS |
| ACTATTGCGTGACACAGTGT+TGG | 0.646715 | 7_1:-79062372 | Msa1041490:three_prime_UTR |
| GTTGGTGCTGTGAAGTGAAG+TGG | 0.656864 | 7_1:+79066510 | None:intergenic |
| GCTGATTTAATGTTGAAACC+TGG | 0.657874 | 7_1:-79064774 | Msa1041490:CDS |
| GGAACTCAAATGGTTCATTG+AGG | 0.660332 | 7_1:-79066029 | Msa1041490:CDS |
| GAACAAGGGACATACCTCAA+AGG | 0.670183 | 7_1:+79064740 | None:intergenic |
| ATATGGGTGATGATAACGAG+AGG | 0.695657 | 7_1:-79065973 | Msa1041490:CDS |
| TATGGGTGATGATAACGAGA+GGG | 0.700470 | 7_1:-79065972 | Msa1041490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAAAAATTATAAGCAA+AGG | + | chr7_1:79063594-79063613 | None:intergenic | 10.0% |
| !!! | ATAAAGTAATTTAAAATTGT+TGG | - | chr7_1:79063803-79063822 | Msa1041490:intron | 10.0% |
| !! | AAAAACAAAAACAAAAAATT+AGG | - | chr7_1:79065757-79065776 | Msa1041490:CDS | 10.0% |
| !! | AAAACAAAAACAAAAAATTA+GGG | - | chr7_1:79065758-79065777 | Msa1041490:CDS | 10.0% |
| !! | TTAAATTACAAAATACAATT+TGG | - | chr7_1:79066347-79066366 | Msa1041490:exon | 10.0% |
| !! | TAATAGGAATTTAAATCATA+TGG | + | chr7_1:79063651-79063670 | None:intergenic | 15.0% |
| !!! | AAGTATGTTAATTTAAAATC+AGG | - | chr7_1:79063777-79063796 | Msa1041490:intron | 15.0% |
| !! | TTATGTTAATCATCATTTAT+AGG | - | chr7_1:79063896-79063915 | Msa1041490:intron | 15.0% |
| !!! | ACTAAAACCTTTTTATTAAA+AGG | + | chr7_1:79064302-79064321 | None:intergenic | 15.0% |
| !!! | TGAATTTTATATGTTACTTT+CGG | + | chr7_1:79064794-79064813 | None:intergenic | 15.0% |
| !! | AAAATTTGTCAATTTAGTTA+TGG | - | chr7_1:79065372-79065391 | Msa1041490:intron | 15.0% |
| !! | CAAATAATTATGATATATTG+TGG | - | chr7_1:79066048-79066067 | Msa1041490:CDS | 15.0% |
| !!! | AAAAACATTGCTTTTTCAAT+TGG | - | chr7_1:79062793-79062812 | Msa1041490:intron | 20.0% |
| !!! | AAAACATTGCTTTTTCAATT+GGG | - | chr7_1:79062794-79062813 | Msa1041490:intron | 20.0% |
| !!! | AAACCTTTTCAATATATAGT+TGG | - | chr7_1:79063009-79063028 | Msa1041490:intron | 20.0% |
| !! | ATAAAAGAGAATGTAAAACA+TGG | + | chr7_1:79063333-79063352 | None:intergenic | 20.0% |
| !!! | ATATAAGTCAATTTTGTATC+TGG | - | chr7_1:79063368-79063387 | Msa1041490:intron | 20.0% |
| !!! | ATGCTATTTAGTAAAAATCA+AGG | - | chr7_1:79063517-79063536 | Msa1041490:intron | 20.0% |
| !!! | TTTTATAAACATACTGAAAC+TGG | - | chr7_1:79063605-79063624 | Msa1041490:intron | 20.0% |
| !!! | GTGAGAAATTACATTTTAAA+GGG | + | chr7_1:79063867-79063886 | None:intergenic | 20.0% |
| !! | TAAATGATGATTAACATAAG+TGG | + | chr7_1:79063895-79063914 | None:intergenic | 20.0% |
| !! | ATTTCTTTACTAGGTATATA+AGG | + | chr7_1:79064005-79064024 | None:intergenic | 20.0% |
| !!! | AAACAGTCCTTTTAATAAAA+AGG | - | chr7_1:79064292-79064311 | Msa1041490:intron | 20.0% |
| !! | AGTTCATGAAGTTAATTATA+GGG | - | chr7_1:79064434-79064453 | Msa1041490:intron | 20.0% |
| !!! | TATGTTGTTTTAAATCTGTT+TGG | - | chr7_1:79064529-79064548 | Msa1041490:intron | 20.0% |
| !! | ATTAACTCGTATCATTAATA+AGG | - | chr7_1:79064617-79064636 | Msa1041490:intron | 20.0% |
| !! | TTTATATTCTCATTGAAGTA+TGG | - | chr7_1:79065131-79065150 | Msa1041490:intron | 20.0% |
| !!! | TTCTCAATTTAGTTTTAAAG+TGG | - | chr7_1:79065225-79065244 | Msa1041490:intron | 20.0% |
| !! | TCAATTTAGTTATGGTTTAA+TGG | - | chr7_1:79065380-79065399 | Msa1041490:intron | 20.0% |
| !! | CAATTATACATTGAAAAACA+TGG | + | chr7_1:79065436-79065455 | None:intergenic | 20.0% |
| !!! | ATTGATGCGATTTTAAATAA+TGG | - | chr7_1:79065452-79065471 | Msa1041490:intron | 20.0% |
| !!! | TTGATGCGATTTTAAATAAT+GGG | - | chr7_1:79065453-79065472 | Msa1041490:intron | 20.0% |
| !!! | ATTTGTGTAGTTAGATTTTT+AGG | - | chr7_1:79065674-79065693 | Msa1041490:CDS | 20.0% |
| !!! | TTTTTGATTAGTTGATGATA+AGG | + | chr7_1:79065742-79065761 | None:intergenic | 20.0% |
| !! | AAAAACAAAAAATTAGGGTA+TGG | - | chr7_1:79065763-79065782 | Msa1041490:CDS | 20.0% |
| !! | AAATCTGTCTCTTTATTATT+AGG | - | chr7_1:79065896-79065915 | Msa1041490:CDS | 20.0% |
| !! | ATATCATAATTATTTGCCAA+AGG | + | chr7_1:79066044-79066063 | None:intergenic | 20.0% |
| !! | AAATACAATTTGGTAAACTA+AGG | - | chr7_1:79066357-79066376 | Msa1041490:five_prime_UTR | 20.0% |
| !! | CGTATGAAAAAACATATATT+TGG | + | chr7_1:79066452-79066471 | None:intergenic | 20.0% |
| !!! | ATTTGAGTTCTTTAATCATT+TGG | + | chr7_1:79066500-79066519 | None:intergenic | 20.0% |
| ! | CAAAGAAATATACGTGTTAA+GGG | + | chr7_1:79062490-79062509 | None:intergenic | 25.0% |
| ! | TTAGTTTCATTTCAAGAGAA+TGG | + | chr7_1:79062591-79062610 | None:intergenic | 25.0% |
| ! | GATAATGATGAAGAACAAAA+GGG | + | chr7_1:79062673-79062692 | None:intergenic | 25.0% |
| !! | TGATAATGATGAAGAACAAA+AGG | + | chr7_1:79062674-79062693 | None:intergenic | 25.0% |
| !! | CTCAATTTTGTTGAGTAAAT+GGG | + | chr7_1:79062745-79062764 | None:intergenic | 25.0% |
| !! | ACTCAATTTTGTTGAGTAAA+TGG | + | chr7_1:79062746-79062765 | None:intergenic | 25.0% |
| !! | TCTTTTGTTCAATCAGATAA+TGG | - | chr7_1:79062820-79062839 | Msa1041490:intron | 25.0% |
| ! | CATCCAACTATATATTGAAA+AGG | + | chr7_1:79063015-79063034 | None:intergenic | 25.0% |
| !! | GTCTTTTTGTTAAGTTCAAA+CGG | + | chr7_1:79063464-79063483 | None:intergenic | 25.0% |
| ! | AATTTAAATCATATGGTAGG+TGG | + | chr7_1:79063644-79063663 | None:intergenic | 25.0% |
| ! | AGGAATTTAAATCATATGGT+AGG | + | chr7_1:79063647-79063666 | None:intergenic | 25.0% |
| ! | ATTCCTATTATCCAATTTCA+TGG | - | chr7_1:79063661-79063680 | Msa1041490:intron | 25.0% |
| ! | AAAAACATGAACCATGAAAT+TGG | + | chr7_1:79063675-79063694 | None:intergenic | 25.0% |
| !!! | ATTACATTTTAAAGGGAACA+TGG | + | chr7_1:79063860-79063879 | None:intergenic | 25.0% |
| !! | GGTGAGAAATTACATTTTAA+AGG | + | chr7_1:79063868-79063887 | None:intergenic | 25.0% |
| ! | TATAGGACAAAATTGAACTA+AGG | - | chr7_1:79063913-79063932 | Msa1041490:intron | 25.0% |
| ! | ATAGGACAAAATTGAACTAA+GGG | - | chr7_1:79063914-79063933 | Msa1041490:intron | 25.0% |
| ! | AAAAATAGTTTAACGAGCAT+TGG | + | chr7_1:79064351-79064370 | None:intergenic | 25.0% |
| !! | TTAGAAGTTAACTTGATTTC+TGG | + | chr7_1:79064394-79064413 | None:intergenic | 25.0% |
| ! | CTAAAAATAAGCATATCTCT+TGG | - | chr7_1:79064410-79064429 | Msa1041490:intron | 25.0% |
| ! | CAGTTCATGAAGTTAATTAT+AGG | - | chr7_1:79064433-79064452 | Msa1041490:intron | 25.0% |
| !!! | AATTACCCTTTTGCTTTTAT+AGG | + | chr7_1:79064938-79064957 | None:intergenic | 25.0% |
| ! | ATCTGGTGAAAATTAGAATT+GGG | - | chr7_1:79064974-79064993 | Msa1041490:CDS | 25.0% |
| ! | TGAAAATTAGAATTGGGATT+AGG | - | chr7_1:79064980-79064999 | Msa1041490:CDS | 25.0% |
| ! | GAAAATTAGAATTGGGATTA+GGG | - | chr7_1:79064981-79065000 | Msa1041490:CDS | 25.0% |
| !!! | ATGAAATCTATGATTTTGAC+AGG | + | chr7_1:79065081-79065100 | None:intergenic | 25.0% |
| !!! | AAAATACCTGTCTTGTTTAA+TGG | - | chr7_1:79065159-79065178 | Msa1041490:intron | 25.0% |
| ! | TAAAACTAAATTGAGAAACC+AGG | + | chr7_1:79065222-79065241 | None:intergenic | 25.0% |
| ! | TTGCACAAGTAATATTTCAT+GGG | + | chr7_1:79065254-79065273 | None:intergenic | 25.0% |
| ! | TTTGCACAAGTAATATTTCA+TGG | + | chr7_1:79065255-79065274 | None:intergenic | 25.0% |
| !! | CTTATGTTTTTCATTGAAGT+AGG | - | chr7_1:79065342-79065361 | Msa1041490:intron | 25.0% |
| !!! | AGTTTTTCAATTTTGCACAA+AGG | - | chr7_1:79065564-79065583 | Msa1041490:intron | 25.0% |
| ! | TATAATATAAGACAGTGGAA+AGG | - | chr7_1:79065798-79065817 | Msa1041490:CDS | 25.0% |
| ! | TTCAATCTTTGATTCTAACA+AGG | + | chr7_1:79065878-79065897 | None:intergenic | 25.0% |
| ! | CTACATGCTATTATAATTAG+AGG | - | chr7_1:79065964-79065983 | Msa1041490:CDS | 25.0% |
| ! | TAATTATTTGCCAAAGGAAT+AGG | + | chr7_1:79066038-79066057 | None:intergenic | 25.0% |
| ! | GGTATTCAAAGATTTGTAAT+TGG | - | chr7_1:79066306-79066325 | Msa1041490:CDS | 25.0% |
| ! | AAAACATATATTTGGAGAGA+TGG | + | chr7_1:79066444-79066463 | None:intergenic | 25.0% |
| GCAAAGAAATATACGTGTTA+AGG | + | chr7_1:79062491-79062510 | None:intergenic | 30.0% | |
| ATGGAAAGGTAGAAACTTAT+GGG | + | chr7_1:79062572-79062591 | None:intergenic | 30.0% | |
| AATGGAAAGGTAGAAACTTA+TGG | + | chr7_1:79062573-79062592 | None:intergenic | 30.0% | |
| TTCATTTCAAGAGAATGGAA+AGG | + | chr7_1:79062586-79062605 | None:intergenic | 30.0% | |
| !! | TGAGAAGTTGTGATTTGTTA+AGG | + | chr7_1:79062614-79062633 | None:intergenic | 30.0% |
| TCTCAAAAAGATTGGAACTT+GGG | + | chr7_1:79062719-79062738 | None:intergenic | 30.0% | |
| ! | AATTTTGTTGAGTAAATGGG+CGG | + | chr7_1:79062742-79062761 | None:intergenic | 30.0% |
| AATTGAGTGACCTCAAAAAA+TGG | - | chr7_1:79062758-79062777 | Msa1041490:intron | 30.0% | |
| ACCTCAAAAAATGGCATAAT+TGG | - | chr7_1:79062767-79062786 | Msa1041490:intron | 30.0% | |
| CCTCAAAAAATGGCATAATT+GGG | - | chr7_1:79062768-79062787 | Msa1041490:intron | 30.0% | |
| TAGAGGAACTATATTGTTTG+TGG | - | chr7_1:79062965-79062984 | Msa1041490:intron | 30.0% | |
| TATATTGTTTGTGGAAGCAA+AGG | - | chr7_1:79062974-79062993 | Msa1041490:intron | 30.0% | |
| ATCAACAATAAGTTCAGTCT+CGG | + | chr7_1:79063094-79063113 | None:intergenic | 30.0% | |
| ! | GACTGAACTTATTGTTGATT+TGG | - | chr7_1:79063095-79063114 | Msa1041490:intron | 30.0% |
| !! | TGATGTTGTTTCAAAGAATG+AGG | - | chr7_1:79063122-79063141 | Msa1041490:intron | 30.0% |
| AAGAATGAGGATTTGAAAAG+AGG | - | chr7_1:79063135-79063154 | Msa1041490:intron | 30.0% | |
| AGAATGAGGATTTGAAAAGA+GGG | - | chr7_1:79063136-79063155 | Msa1041490:intron | 30.0% | |
| TTGCAACACATCAATCAAAA+TGG | + | chr7_1:79063486-79063505 | None:intergenic | 30.0% | |
| AAGCAAAGATAGTAGATTTC+AGG | + | chr7_1:79063558-79063577 | None:intergenic | 30.0% | |
| GAACCATGAAATTGGATAAT+AGG | + | chr7_1:79063667-79063686 | None:intergenic | 30.0% | |
| AACATACAACATGAGATGAA+AGG | + | chr7_1:79063714-79063733 | None:intergenic | 30.0% | |
| ATGATTAACATAAGTGGAAC+TGG | + | chr7_1:79063889-79063908 | None:intergenic | 30.0% | |
| CTTTACTAGGTATATAAGGT+GGG | + | chr7_1:79064001-79064020 | None:intergenic | 30.0% | |
| TCTTTACTAGGTATATAAGG+TGG | + | chr7_1:79064002-79064021 | None:intergenic | 30.0% | |
| CAAATTTCTTGTGTTTGTGT+CGG | - | chr7_1:79064193-79064212 | Msa1041490:intron | 30.0% | |
| AAATTTCTTGTGTTTGTGTC+GGG | - | chr7_1:79064194-79064213 | Msa1041490:intron | 30.0% | |
| AATTTGACCAATTATGCTTG+GGG | + | chr7_1:79064255-79064274 | None:intergenic | 30.0% | |
| CAATTTGACCAATTATGCTT+GGG | + | chr7_1:79064256-79064275 | None:intergenic | 30.0% | |
| ! | TATAGGGATTTTCTTTCTGT+TGG | - | chr7_1:79064450-79064469 | Msa1041490:intron | 30.0% |
| TTTAAATCTGTTTGGTCTGT+TGG | - | chr7_1:79064537-79064556 | Msa1041490:intron | 30.0% | |
| CTCGTATCATTAATAAGGAA+AGG | - | chr7_1:79064622-79064641 | Msa1041490:intron | 30.0% | |
| AGGAAAGGTTCAATACAAAA+AGG | - | chr7_1:79064637-79064656 | Msa1041490:intron | 30.0% | |
| ! | TTGTTAAGCTGAGATAGTTT+TGG | - | chr7_1:79064905-79064924 | Msa1041490:CDS | 30.0% |
| ATGTTGCCTATAAAAGCAAA+AGG | - | chr7_1:79064929-79064948 | Msa1041490:CDS | 30.0% | |
| TGTTGCCTATAAAAGCAAAA+GGG | - | chr7_1:79064930-79064949 | Msa1041490:CDS | 30.0% | |
| CATCTGGTGAAAATTAGAAT+TGG | - | chr7_1:79064973-79064992 | Msa1041490:CDS | 30.0% | |
| AGTTTCTCGAATATCTTCTT+GGG | - | chr7_1:79065013-79065032 | Msa1041490:intron | 30.0% | |
| TGGCTAAGATGAAGAATATA+AGG | + | chr7_1:79065055-79065074 | None:intergenic | 30.0% | |
| TCAAAACCATTAAACAAGAC+AGG | + | chr7_1:79065168-79065187 | None:intergenic | 30.0% | |
| CTAAGCTAAAATGAAACCTT+GGG | + | chr7_1:79065302-79065321 | None:intergenic | 30.0% | |
| TCTAAGCTAAAATGAAACCT+TGG | + | chr7_1:79065303-79065322 | None:intergenic | 30.0% | |
| !! | ATGCGATTTTAAATAATGGG+TGG | - | chr7_1:79065456-79065475 | Msa1041490:intron | 30.0% |
| !! | TTGATTAGTTGATGATAAGG+AGG | + | chr7_1:79065739-79065758 | None:intergenic | 30.0% |
| AAAAAATTAGGGTATGGAAC+AGG | - | chr7_1:79065769-79065788 | Msa1041490:CDS | 30.0% | |
| GCTGTTATAATATAAGACAG+TGG | - | chr7_1:79065793-79065812 | Msa1041490:CDS | 30.0% | |
| GTTTGACGATTTCAAATCTA+AGG | - | chr7_1:79065820-79065839 | Msa1041490:CDS | 30.0% | |
| !! | TTCAAATCTAAGGTTAGCTT+CGG | - | chr7_1:79065830-79065849 | Msa1041490:CDS | 30.0% |
| !!! | GTTTTAGAATCCTATTCCTT+TGG | - | chr7_1:79066025-79066044 | Msa1041490:CDS | 30.0% |
| ATAACTACATTCCACTTTCT+GGG | + | chr7_1:79066108-79066127 | None:intergenic | 30.0% | |
| TATAACTACATTCCACTTTC+TGG | + | chr7_1:79066109-79066128 | None:intergenic | 30.0% | |
| TTTGTCTGTAATGACAAGAT+AGG | + | chr7_1:79066195-79066214 | None:intergenic | 30.0% | |
| ATCTTGTCATTACAGACAAA+CGG | - | chr7_1:79066195-79066214 | Msa1041490:CDS | 30.0% | |
| CGTGTTAAGGGTTAATCAAA+AGG | + | chr7_1:79062478-79062497 | None:intergenic | 35.0% | |
| CTCAAAAAGATTGGAACTTG+GGG | + | chr7_1:79062718-79062737 | None:intergenic | 35.0% | |
| GTCTCAAAAAGATTGGAACT+TGG | + | chr7_1:79062720-79062739 | None:intergenic | 35.0% | |
| !!! | CCCAATTATGCCATTTTTTG+AGG | + | chr7_1:79062771-79062790 | None:intergenic | 35.0% |
| !!! | CACTCACTTTTTTCCCATAT+GGG | - | chr7_1:79062907-79062926 | Msa1041490:intron | 35.0% |
| GAAAATGAAGGCAGATATAG+AGG | - | chr7_1:79062948-79062967 | Msa1041490:intron | 35.0% | |
| ATATAGTTGGATGTGAGCAT+TGG | - | chr7_1:79063022-79063041 | Msa1041490:intron | 35.0% | |
| !!! | TGGTTTTGAGTGTTCAAGAA+GGG | - | chr7_1:79063052-79063071 | Msa1041490:intron | 35.0% |
| TCAACAATAAGTTCAGTCTC+GGG | + | chr7_1:79063093-79063112 | None:intergenic | 35.0% | |
| GAATGAGGATTTGAAAAGAG+GGG | - | chr7_1:79063137-79063156 | Msa1041490:intron | 35.0% | |
| TTGCAGGTTACAATGTTCAA+AGG | - | chr7_1:79063271-79063290 | Msa1041490:intron | 35.0% | |
| !! | TGTTCAAAGGTATTCTTTGC+AGG | - | chr7_1:79063284-79063303 | Msa1041490:intron | 35.0% |
| GATTGATGTGTTGCAATTTC+AGG | - | chr7_1:79063490-79063509 | Msa1041490:intron | 35.0% | |
| TTTGTCTTCGAGTCATAATC+AGG | - | chr7_1:79063742-79063761 | Msa1041490:intron | 35.0% | |
| GACAAAATTGAACTAAGGGA+AGG | - | chr7_1:79063918-79063937 | Msa1041490:intron | 35.0% | |
| ATACCTAGTAAAGAAATCCC+TGG | - | chr7_1:79064008-79064027 | Msa1041490:intron | 35.0% | |
| AAACCAGGGATTTCTTTACT+AGG | + | chr7_1:79064014-79064033 | None:intergenic | 35.0% | |
| ! | GCTGATTTAATGTTGAAACC+TGG | - | chr7_1:79064122-79064141 | Msa1041490:intron | 35.0% |
| GATTTAATGTTGAAACCTGG+TGG | - | chr7_1:79064125-79064144 | Msa1041490:intron | 35.0% | |
| AGAGAACTTTCTCAGAACAA+GGG | + | chr7_1:79064173-79064192 | None:intergenic | 35.0% | |
| ATTTGACCAATTATGCTTGG+GGG | + | chr7_1:79064254-79064273 | None:intergenic | 35.0% | |
| GCAATTTGACCAATTATGCT+TGG | + | chr7_1:79064257-79064276 | None:intergenic | 35.0% | |
| !! | AGTTAACTTGATTTCTGGCT+AGG | + | chr7_1:79064389-79064408 | None:intergenic | 35.0% |
| TCGTTATTCGATGTCAATCT+TGG | - | chr7_1:79064496-79064515 | Msa1041490:intron | 35.0% | |
| CGTTATTCGATGTCAATCTT+GGG | - | chr7_1:79064497-79064516 | Msa1041490:intron | 35.0% | |
| AAGGAGAAAACCCAAAAACA+TGG | - | chr7_1:79064656-79064675 | Msa1041490:intron | 35.0% | |
| ACTTCGAGGTGAAGTTTATT+CGG | + | chr7_1:79064741-79064760 | None:intergenic | 35.0% | |
| AATAAACTTCACCTCGAAGT+TGG | - | chr7_1:79064741-79064760 | Msa1041490:intron | 35.0% | |
| !!! | GCACAATGTCATTTTTGAGT+CGG | + | chr7_1:79064866-79064885 | None:intergenic | 35.0% |
| TAACAAACCAACCAACCAAA+GGG | + | chr7_1:79064891-79064910 | None:intergenic | 35.0% | |
| TTAACAAACCAACCAACCAA+AGG | + | chr7_1:79064892-79064911 | None:intergenic | 35.0% | |
| AAGCAAAAGGGTAATTGAGA+AGG | - | chr7_1:79064942-79064961 | Msa1041490:CDS | 35.0% | |
| AGAAGATATTCGAGAAACTC+AGG | + | chr7_1:79065012-79065031 | None:intergenic | 35.0% | |
| GAGTTTCTCGAATATCTTCT+TGG | - | chr7_1:79065012-79065031 | Msa1041490:intron | 35.0% | |
| !! | TCTATGATTTTGACAGGAAC+TGG | + | chr7_1:79065075-79065094 | None:intergenic | 35.0% |
| ATAGCTATGTTAGTGATTCC+TGG | - | chr7_1:79065201-79065220 | Msa1041490:intron | 35.0% | |
| TGTTGCAACTACTGGTATAT+GGG | - | chr7_1:79065495-79065514 | Msa1041490:intron | 35.0% | |
| ! | CGCAGTTGATTTCTATTTGT+AGG | + | chr7_1:79065649-79065668 | None:intergenic | 35.0% |
| TTGATTCTAACAAGGAGATC+TGG | + | chr7_1:79065870-79065889 | None:intergenic | 35.0% | |
| AAGTGCAAGCTTATGCAATT+TGG | - | chr7_1:79066263-79066282 | Msa1041490:CDS | 35.0% | |
| !!! | GAAATACTTGCTGATTTTGC+TGG | - | chr7_1:79066285-79066304 | Msa1041490:CDS | 35.0% |
| GTAGTTGAGATCCATTTAAG+AGG | - | chr7_1:79066417-79066436 | Msa1041490:five_prime_UTR | 35.0% | |
| TTCTTTAATCATTTGGCCAG+GGG | + | chr7_1:79066493-79066512 | None:intergenic | 35.0% | |
| GTTCTTTAATCATTTGGCCA+GGG | + | chr7_1:79066494-79066513 | None:intergenic | 35.0% | |
| AGTTCTTTAATCATTTGGCC+AGG | + | chr7_1:79066495-79066514 | None:intergenic | 35.0% | |
| !! | ACTTGGGGTTTTGTAGAAGT+GGG | + | chr7_1:79062703-79062722 | None:intergenic | 40.0% |
| !! | AACTTGGGGTTTTGTAGAAG+TGG | + | chr7_1:79062704-79062723 | None:intergenic | 40.0% |
| ! | AGACTCAACCATTTTGTGCA+GGG | - | chr7_1:79062846-79062865 | Msa1041490:intron | 40.0% |
| ! | TTTGAGTTCCCTGCACAAAA+TGG | + | chr7_1:79062857-79062876 | None:intergenic | 40.0% |
| ! | TTTTGTGCAGGGAACTCAAA+TGG | - | chr7_1:79062857-79062876 | Msa1041490:intron | 40.0% |
| GGAACTCAAATGGTTCATTG+AGG | - | chr7_1:79062867-79062886 | Msa1041490:intron | 40.0% | |
| CCATATGGGAAAAAAGTGAG+TGG | + | chr7_1:79062909-79062928 | None:intergenic | 40.0% | |
| !!! | CCACTCACTTTTTTCCCATA+TGG | - | chr7_1:79062906-79062925 | Msa1041490:intron | 40.0% |
| CTCGTTATCATCACCCATAT+GGG | + | chr7_1:79062923-79062942 | None:intergenic | 40.0% | |
| TCTCGTTATCATCACCCATA+TGG | + | chr7_1:79062924-79062943 | None:intergenic | 40.0% | |
| ! | ATATGGGTGATGATAACGAG+AGG | - | chr7_1:79062923-79062942 | Msa1041490:intron | 40.0% |
| ! | TATGGGTGATGATAACGAGA+GGG | - | chr7_1:79062924-79062943 | Msa1041490:intron | 40.0% |
| TAACGAGAGGGTGAAAATGA+AGG | - | chr7_1:79062936-79062955 | Msa1041490:intron | 40.0% | |
| GGAAGCAAAGGATTGAAGAA+AGG | - | chr7_1:79062986-79063005 | Msa1041490:intron | 40.0% | |
| !!! | CTGGTTTTGAGTGTTCAAGA+AGG | - | chr7_1:79063051-79063070 | Msa1041490:intron | 40.0% |
| !!! | GGTTTTGAGTGTTCAAGAAG+GGG | - | chr7_1:79063053-79063072 | Msa1041490:intron | 40.0% |
| AGGATTTGAAAAGAGGGGTT+TGG | - | chr7_1:79063142-79063161 | Msa1041490:intron | 40.0% | |
| GGATTTGAAAAGAGGGGTTT+GGG | - | chr7_1:79063143-79063162 | Msa1041490:intron | 40.0% | |
| !! | TCTTGCTATTGGCATTGGTA+GGG | - | chr7_1:79063191-79063210 | Msa1041490:intron | 40.0% |
| !!! | ATTGGCATTGGTAGGGTTTT+AGG | - | chr7_1:79063198-79063217 | Msa1041490:intron | 40.0% |
| !!! | ATTGGTAGGGTTTTAGGAGA+TGG | - | chr7_1:79063204-79063223 | Msa1041490:intron | 40.0% |
| ! | CAATTTTGTATCTGGAGACG+TGG | - | chr7_1:79063376-79063395 | Msa1041490:intron | 40.0% |
| GTTGGAACCATTGAAGGATA+TGG | - | chr7_1:79063947-79063966 | Msa1041490:intron | 40.0% | |
| GAACCATTGAAGGATATGGA+AGG | - | chr7_1:79063951-79063970 | Msa1041490:intron | 40.0% | |
| TCTCCTTCCATATCCTTCAA+TGG | + | chr7_1:79063957-79063976 | None:intergenic | 40.0% | |
| CAACTTCAGCTTGTAAACCA+GGG | + | chr7_1:79064028-79064047 | None:intergenic | 40.0% | |
| GAGAGAACTTTCTCAGAACA+AGG | + | chr7_1:79064174-79064193 | None:intergenic | 40.0% | |
| ACTCTCGAAAAGGATCCAAT+TGG | - | chr7_1:79064226-79064245 | Msa1041490:intron | 40.0% | |
| !! | TGTTGGTTTAGAGACTTGGT+TGG | - | chr7_1:79064554-79064573 | Msa1041490:intron | 40.0% |
| ! | TAGAGACTTGGTTGGTTAGT+TGG | - | chr7_1:79064562-79064581 | Msa1041490:intron | 40.0% |
| GGTTGCTCAATCTTTAGCTA+GGG | + | chr7_1:79064704-79064723 | None:intergenic | 40.0% | |
| TGGTTGCTCAATCTTTAGCT+AGG | + | chr7_1:79064705-79064724 | None:intergenic | 40.0% | |
| GAAGTTTATTCGGCGATAAG+CGG | + | chr7_1:79064731-79064750 | None:intergenic | 40.0% | |
| ATCTCTACATTCCAACTTCG+AGG | + | chr7_1:79064755-79064774 | None:intergenic | 40.0% | |
| AGTTGGAATGTAGAGATAGC+TGG | - | chr7_1:79064758-79064777 | Msa1041490:CDS | 40.0% | |
| ATGGGTGGTTACAAAGAACA+TGG | - | chr7_1:79065471-79065490 | Msa1041490:intron | 40.0% | |
| TGGGTGGTTACAAAGAACAT+GGG | - | chr7_1:79065472-79065491 | Msa1041490:intron | 40.0% | |
| GTGTTGCAACTACTGGTATA+TGG | - | chr7_1:79065494-79065513 | Msa1041490:intron | 40.0% | |
| GGCTACTTGTGAAGATTAGA+TGG | + | chr7_1:79066087-79066106 | None:intergenic | 40.0% | |
| AGGAAAGAAACAGTCAGAAG+CGG | + | chr7_1:79066175-79066194 | None:intergenic | 40.0% | |
| CTACAGAGACTAATCTCTTG+AGG | - | chr7_1:79066395-79066414 | Msa1041490:five_prime_UTR | 40.0% | |
| ! | TTGCCTGTTTGAGGTTGTCA+CGG | + | chr7_1:79062411-79062430 | None:intergenic | 45.0% |
| TATCGTTGTCTTGTCGCGAA+TGG | + | chr7_1:79062437-79062456 | None:intergenic | 45.0% | |
| ATGGGCGGTCTCAAAAAGAT+TGG | + | chr7_1:79062727-79062746 | None:intergenic | 45.0% | |
| CTGCACAAAATGGTTGAGTC+TGG | + | chr7_1:79062847-79062866 | None:intergenic | 45.0% | |
| ! | CAGACTCAACCATTTTGTGC+AGG | - | chr7_1:79062845-79062864 | Msa1041490:intron | 45.0% |
| !! | AGTTGGATGTGAGCATTGGA+AGG | - | chr7_1:79063026-79063045 | Msa1041490:intron | 45.0% |
| !! | ATGTGAGCATTGGAAGGATC+TGG | - | chr7_1:79063032-79063051 | Msa1041490:intron | 45.0% |
| ATAAGTTCAGTCTCGGGTCT+AGG | + | chr7_1:79063087-79063106 | None:intergenic | 45.0% | |
| !! | CTCTTGCTATTGGCATTGGT+AGG | - | chr7_1:79063190-79063209 | Msa1041490:intron | 45.0% |
| !!! | GGTTTTAGGAGATGGTGGAA+AGG | - | chr7_1:79063212-79063231 | Msa1041490:intron | 45.0% |
| TGCGTCAGATTTAAGTCCTG+TGG | - | chr7_1:79063239-79063258 | Msa1041490:intron | 45.0% | |
| TTGAACTAAGGGAAGGATCG+TGG | - | chr7_1:79063925-79063944 | Msa1041490:intron | 45.0% | |
| ATCGTGGTTGGAACCATTGA+AGG | - | chr7_1:79063941-79063960 | Msa1041490:intron | 45.0% | |
| CCAACTTCAGCTTGTAAACC+AGG | + | chr7_1:79064029-79064048 | None:intergenic | 45.0% | |
| CCTGGTTTACAAGCTGAAGT+TGG | - | chr7_1:79064026-79064045 | Msa1041490:intron | 45.0% | |
| GAACCTAGAGCTGCATTAGA+TGG | - | chr7_1:79064056-79064075 | Msa1041490:intron | 45.0% | |
| !! | GCATTAGATGGAGGCATTGA+CGG | - | chr7_1:79064068-79064087 | Msa1041490:intron | 45.0% |
| CTCTTCTCCATCTGTGTGAT+GGG | - | chr7_1:79064099-79064118 | Msa1041490:intron | 45.0% | |
| TCTTCTCCATCTGTGTGATG+GGG | - | chr7_1:79064100-79064119 | Msa1041490:intron | 45.0% | |
| TCAAAGGCAAAGAATCCACC+AGG | + | chr7_1:79064143-79064162 | None:intergenic | 45.0% | |
| !! | TGGTGGATTCTTTGCCTTTG+AGG | - | chr7_1:79064142-79064161 | Msa1041490:intron | 45.0% |
| GAACAAGGGACATACCTCAA+AGG | + | chr7_1:79064159-79064178 | None:intergenic | 45.0% | |
| GCTTCTGCTTACTCTCGAAA+AGG | - | chr7_1:79064216-79064235 | Msa1041490:intron | 45.0% | |
| !! | TTATGCTTGGGGGTACCAAT+TGG | + | chr7_1:79064244-79064263 | None:intergenic | 45.0% |
| TTGGTACCCCCAAGCATAAT+TGG | - | chr7_1:79064245-79064264 | Msa1041490:intron | 45.0% | |
| CTGGCTAGGTGATACTATTC+AGG | + | chr7_1:79064375-79064394 | None:intergenic | 45.0% | |
| !! | GGTCTGTTGGTTTAGAGACT+TGG | - | chr7_1:79064550-79064569 | Msa1041490:intron | 45.0% |
| !!! | GGGCTAGTCACCATGTTTTT+GGG | + | chr7_1:79064669-79064688 | None:intergenic | 45.0% |
| !!! | TGGGCTAGTCACCATGTTTT+TGG | + | chr7_1:79064670-79064689 | None:intergenic | 45.0% |
| TGCTCAATCTTTAGCTAGGG+TGG | + | chr7_1:79064701-79064720 | None:intergenic | 45.0% | |
| TATTCGGCGATAAGCGGATA+TGG | + | chr7_1:79064725-79064744 | None:intergenic | 45.0% | |
| TCTCTATTGTCTCAGCGTAG+CGG | + | chr7_1:79064823-79064842 | None:intergenic | 45.0% | |
| AATGACATTGTGCCACCCTT+TGG | - | chr7_1:79064873-79064892 | Msa1041490:CDS | 45.0% | |
| TGAGAAGGATGACAGTCATC+TGG | - | chr7_1:79064957-79064976 | Msa1041490:CDS | 45.0% | |
| ! | AACATGGGTGTTGCAACTAC+TGG | - | chr7_1:79065487-79065506 | Msa1041490:intron | 45.0% |
| ! | AACTACTGGTATATGGGCTG+TGG | - | chr7_1:79065501-79065520 | Msa1041490:intron | 45.0% |
| TTGCTTTGCGGCTTCTATTC+TGG | - | chr7_1:79065610-79065629 | Msa1041490:intron | 45.0% | |
| TGCTTTGCGGCTTCTATTCT+GGG | - | chr7_1:79065611-79065630 | Msa1041490:intron | 45.0% | |
| TTCACAAGTAGCCCAGAAAG+TGG | - | chr7_1:79066094-79066113 | Msa1041490:CDS | 45.0% | |
| AAACGGTGAGAAGCAGTGTA+GGG | - | chr7_1:79066212-79066231 | Msa1041490:CDS | 45.0% | |
| GGAGAGATGGACCTCTTAAA+TGG | + | chr7_1:79066431-79066450 | None:intergenic | 45.0% | |
| TGCTGTGAAGTGAAGTGGTC+AGG | + | chr7_1:79062384-79062403 | None:intergenic | 50.0% | |
| !! | GTTGGTGCTGTGAAGTGAAG+TGG | + | chr7_1:79062389-79062408 | None:intergenic | 50.0% |
| ! | CTGTTTGAGGTTGTCACGGT+TGG | + | chr7_1:79062407-79062426 | None:intergenic | 50.0% |
| CAACCGTGACAACCTCAAAC+AGG | - | chr7_1:79062405-79062424 | Msa1041490:three_prime_UTR | 50.0% | |
| GAATGGTGCTTGCCTGTTTG+AGG | + | chr7_1:79062420-79062439 | None:intergenic | 50.0% | |
| ! | AGAGGGGTTTGGGCTGATTT+AGG | - | chr7_1:79063153-79063172 | Msa1041490:intron | 50.0% |
| ! | GAGGGGTTTGGGCTGATTTA+GGG | - | chr7_1:79063154-79063173 | Msa1041490:intron | 50.0% |
| ! | GTTTGGGCTGATTTAGGGAC+TGG | - | chr7_1:79063159-79063178 | Msa1041490:intron | 50.0% |
| ! | GCTGATTTAGGGACTGGAAG+TGG | - | chr7_1:79063165-79063184 | Msa1041490:intron | 50.0% |
| ! | GGAAGTGGTGCTCTTGCTAT+TGG | - | chr7_1:79063180-79063199 | Msa1041490:intron | 50.0% |
| !! | GGTGCTCTTGCTATTGGCAT+TGG | - | chr7_1:79063186-79063205 | Msa1041490:intron | 50.0% |
| !!! | GGTAGGGTTTTAGGAGATGG+TGG | - | chr7_1:79063207-79063226 | Msa1041490:intron | 50.0% |
| ACTAAGGGAAGGATCGTGGT+TGG | - | chr7_1:79063929-79063948 | Msa1041490:intron | 50.0% | |
| GATATGGAAGGAGAGCTTGC+AGG | - | chr7_1:79063963-79063982 | Msa1041490:intron | 50.0% | |
| CCTCCATCTAATGCAGCTCT+AGG | + | chr7_1:79064062-79064081 | None:intergenic | 50.0% | |
| CCTAGAGCTGCATTAGATGG+AGG | - | chr7_1:79064059-79064078 | Msa1041490:intron | 50.0% | |
| GCTCTTCTCCATCTGTGTGA+TGG | - | chr7_1:79064098-79064117 | Msa1041490:intron | 50.0% | |
| AATCAGCCCCATCACACAGA+TGG | + | chr7_1:79064109-79064128 | None:intergenic | 50.0% | |
| ! | ATGGTGACTAGCCCATGAAC+CGG | - | chr7_1:79064675-79064694 | Msa1041490:intron | 50.0% |
| CAATCTTTAGCTAGGGTGGC+CGG | + | chr7_1:79064697-79064716 | None:intergenic | 50.0% | |
| ACATTGTGCCACCCTTTGGT+TGG | - | chr7_1:79064877-79064896 | Msa1041490:CDS | 50.0% | |
| CAAACCAACCAACCAAAGGG+TGG | + | chr7_1:79064888-79064907 | None:intergenic | 50.0% | |
| TTGTAGAGTTGTCACGCCCA+AGG | - | chr7_1:79065283-79065302 | Msa1041490:intron | 50.0% | |
| TAGAAGCCGCAAAGCAAGCA+CGG | + | chr7_1:79065607-79065626 | None:intergenic | 50.0% | |
| CAAACGGTGAGAAGCAGTGT+AGG | - | chr7_1:79066211-79066230 | Msa1041490:CDS | 50.0% | |
| CCAGGGGTTCGATCTCATAT+TGG | + | chr7_1:79066477-79066496 | None:intergenic | 50.0% | |
| CCAATATGAGATCGAACCCC+TGG | - | chr7_1:79066474-79066493 | Msa1041490:five_prime_UTR | 50.0% | |
| CTGGAGACGTGGCAGTGATT+TGG | - | chr7_1:79063387-79063406 | Msa1041490:intron | 55.0% | |
| !! | AGATGGAGGCATTGACGGCA+TGG | - | chr7_1:79064073-79064092 | Msa1041490:intron | 55.0% |
| TGTGCCACCCTTTGGTTGGT+TGG | - | chr7_1:79064881-79064900 | Msa1041490:CDS | 55.0% | |
| GCACGGCAGCTGCAATATCA+TGG | + | chr7_1:79065590-79065609 | None:intergenic | 55.0% | |
| AGTCTCTGTAGTTGCGTGCG+AGG | + | chr7_1:79066386-79066405 | None:intergenic | 55.0% | |
| CCTGCAACAGCAACAGCCAC+AGG | + | chr7_1:79063258-79063277 | None:intergenic | 60.0% | |
| ! | CCTGTGGCTGTTGCTGTTGC+AGG | - | chr7_1:79063255-79063274 | Msa1041490:intron | 60.0% |
| ! | AGCTAGGGTGGCCGGTTCAT+GGG | + | chr7_1:79064689-79064708 | None:intergenic | 60.0% |
| ! | TAGCTAGGGTGGCCGGTTCA+TGG | + | chr7_1:79064690-79064709 | None:intergenic | 60.0% |
| CAGCTGCCGTGCTTGCTTTG+CGG | - | chr7_1:79065598-79065617 | Msa1041490:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 79062372 | 79066546 | 79062372 | ID=Msa1041490;Name=Msa1041490 |
| chr7_1 | mRNA | 79062372 | 79066546 | 79062372 | ID=Msa1041490-mRNA-1;Parent=Msa1041490;Name=Msa1041490-mRNA-1;_AED=0.01;_eAED=0.01;_QI=190|1|1|1|1|1|3|205|373 |
| chr7_1 | exon | 79062372 | 79062708 | 79062372 | ID=Msa1041490-mRNA-1:exon:21232;Parent=Msa1041490-mRNA-1 |
| chr7_1 | exon | 79064755 | 79065000 | 79064755 | ID=Msa1041490-mRNA-1:exon:21231;Parent=Msa1041490-mRNA-1 |
| chr7_1 | exon | 79065613 | 79066546 | 79065613 | ID=Msa1041490-mRNA-1:exon:21230;Parent=Msa1041490-mRNA-1 |
| chr7_1 | five_prime_UTR | 79066357 | 79066546 | 79066357 | ID=Msa1041490-mRNA-1:five_prime_utr;Parent=Msa1041490-mRNA-1 |
| chr7_1 | CDS | 79065613 | 79066356 | 79065613 | ID=Msa1041490-mRNA-1:cds;Parent=Msa1041490-mRNA-1 |
| chr7_1 | CDS | 79064755 | 79065000 | 79064755 | ID=Msa1041490-mRNA-1:cds;Parent=Msa1041490-mRNA-1 |
| chr7_1 | CDS | 79062577 | 79062708 | 79062577 | ID=Msa1041490-mRNA-1:cds;Parent=Msa1041490-mRNA-1 |
| chr7_1 | three_prime_UTR | 79062372 | 79062576 | 79062372 | ID=Msa1041490-mRNA-1:three_prime_utr;Parent=Msa1041490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
