AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1089040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1089040 MtrunA17_Chr2g0330311 78.846 104 18 3 1 101 1 103 1.57e-43 147
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 110 sgRNAs with CRISPR-Local

Find 475 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTACTTTACAGCGTATT+TGG 0.182133 7_3:-2375311 Msa1089040:three_prime_UTR
CGCTTGCTTGGTCCTCTTCC+AGG 0.183340 7_3:+2376511 None:intergenic
TCAATCATTGGCAGCTCTTC+TGG 0.184153 7_3:+2375458 None:intergenic
TTTAATTGACTTGGTGTATT+TGG 0.191469 7_3:+2379912 None:intergenic
GCTCATTCACGCTGGATTAA+AGG 0.216746 7_3:-2379734 Msa1089040:intron
GTTACCTGATCACAGTAATT+TGG 0.220828 7_3:+2376268 None:intergenic
TGCTGGAGTTGGGCTGTTCT+AGG 0.232821 7_3:+2379085 None:intergenic
TTAAGCACAAGGGAAATATT+TGG 0.244278 7_3:-2375418 Msa1089040:three_prime_UTR
AAGAGCATGAACAAGATATT+TGG 0.260261 7_3:-2376869 Msa1089040:three_prime_UTR
GAAAATCCATATCTATTTAA+TGG 0.277620 7_3:-2377485 Msa1089040:three_prime_UTR
TTCTTGAAGGATAATAATTT+AGG 0.289596 7_3:-2376445 Msa1089040:intron
GCTTCAAATGTAATAATGTT+AGG 0.296688 7_3:+2376033 None:intergenic
AGATGTCGAGCCACGATATT+CGG 0.298526 7_3:-2378882 Msa1089040:three_prime_UTR
ATATGGAAGATGATGGAATT+TGG 0.322793 7_3:+2375164 None:intergenic
CTCAAATCCGATCAATTAAT+CGG 0.338994 7_3:-2376697 Msa1089040:three_prime_UTR
ATATTTGGCTAGAGAAGATT+TGG 0.340335 7_3:-2375403 Msa1089040:three_prime_UTR
GATGTCGAGCCACGATATTC+GGG 0.340840 7_3:-2378881 Msa1089040:three_prime_UTR
AGAAGGAGATACTATTACTT+TGG 0.348174 7_3:-2378849 Msa1089040:three_prime_UTR
TGACCCCATCAACACTAAAA+AGG 0.352827 7_3:+2376726 None:intergenic
TTTCAGCATTTGATCCGTTT+GGG 0.360390 7_3:-2382044 Msa1089040:intron
CCTCTGCCCTTGGCCTTGCT+TGG 0.366159 7_3:-2381945 Msa1089040:CDS
CACATAGTGATGGTTGTAAT+AGG 0.384920 7_3:-2379788 Msa1089040:three_prime_UTR
AGTATTCAACTGTTTACCTT+TGG 0.392464 7_3:-2376789 Msa1089040:three_prime_UTR
GTTGACATAACTGTTCCTAA+TGG 0.396734 7_3:-2378614 Msa1089040:three_prime_UTR
CTGCGAGTTGAGACAGAGTT+TGG 0.398712 7_3:+2381911 None:intergenic
ATAATGTTAGGTTTCAAATC+AGG 0.401417 7_3:+2376045 None:intergenic
TCACCTTTGAAACAAGGTTT+AGG 0.402886 7_3:+2381791 None:intergenic
TTCAAAACAGCATCAATCAT+TGG 0.405737 7_3:+2375446 None:intergenic
AAGTCACCATTAAATAGATA+TGG 0.408912 7_3:+2377479 None:intergenic
AATGGTGACTTTGTAGATAG+AGG 0.410819 7_3:-2377467 Msa1089040:three_prime_UTR
TGCTCCAAATTACTGTGATC+AGG 0.411289 7_3:-2376272 Msa1089040:intron
CAAATTTGTCAAAATGTTTG+CGG 0.411891 7_3:-2376813 Msa1089040:three_prime_UTR
CATCTTCCATATAACAAAAT+CGG 0.415509 7_3:-2375153 Msa1089040:three_prime_UTR
GAAAATGATGAATGATTTCA+AGG 0.418810 7_3:-2378816 Msa1089040:three_prime_UTR
CACCCATCGCCACGCTTGCT+TGG 0.419484 7_3:+2376499 None:intergenic
CCAAGCAAGGCCAAGGGCAG+AGG 0.425105 7_3:+2381945 None:intergenic
CAAAGTTGCTATGTCTTCTC+CGG 0.426587 7_3:-2381978 Msa1089040:exon
AGGTGCTTCAAATCGAATAA+AGG 0.429933 7_3:+2376065 None:intergenic
TTATGTGTCTTACCTTCATC+AGG 0.430537 7_3:+2376662 None:intergenic
TAAGCCATTGGCTTAACATC+AGG 0.430731 7_3:+2375540 None:intergenic
GGGCAGAGGAATTGTGTTGC+CGG 0.430749 7_3:+2381959 None:intergenic
GGAAAACATGTTACTGTTTG+TGG 0.443618 7_3:-2378593 Msa1089040:three_prime_UTR
TATTCGGGATCAAGAATAGA+AGG 0.444289 7_3:-2378866 Msa1089040:three_prime_UTR
GTGATGGTTGTAATAGGATC+TGG 0.445017 7_3:-2379782 Msa1089040:three_prime_UTR
CAACACAATTCCTCTGCCCT+TGG 0.447193 7_3:-2381955 Msa1089040:CDS
GGACCAAGCAAGCGTGGCGA+TGG 0.448883 7_3:-2376502 Msa1089040:three_prime_UTR
CCTCTTCCAGGGAGAGATTG+TGG 0.467154 7_3:+2376523 None:intergenic
TTGGTGAGGATGTTACAAAA+AGG 0.470459 7_3:-2376468 Msa1089040:three_prime_UTR
CACAAAACCGATTAATTGAT+CGG 0.472508 7_3:+2376690 None:intergenic
GGTTTAGGTAGCTGCGATGC+AGG 0.473200 7_3:+2381806 None:intergenic
TACATACAAGTGCTGGAGTT+GGG 0.482157 7_3:+2379075 None:intergenic
CAAGGCTTGAGCAAACATCT+TGG 0.488578 7_3:+2381850 None:intergenic
GAACAGAAGTGCTTGGATAG+AGG 0.488821 7_3:-2378794 Msa1089040:three_prime_UTR
AGCATTTGATCCGTTTGGGT+TGG 0.491173 7_3:-2382040 Msa1089040:intron
GTATTGATTATGAGAACAAT+CGG 0.495924 7_3:+2375502 None:intergenic
TGGAGTGTTGTCATTGGCAT+TGG 0.496570 7_3:-2379762 Msa1089040:three_prime_UTR
TAAGAGATACATACAAGTGC+TGG 0.500612 7_3:+2379068 None:intergenic
GATGGTCGCATAAATCGAAC+AGG 0.503746 7_3:-2379951 Msa1089040:CDS
CACCGTTGCATCACAATCAA+AGG 0.506849 7_3:-2381876 Msa1089040:CDS
GATGCGACCAAGCAAGGCCA+AGG 0.507282 7_3:+2381938 None:intergenic
GCTTGCTTGGTCCTCTTCCA+GGG 0.507675 7_3:+2376512 None:intergenic
CTACCTAAACCTTGTTTCAA+AGG 0.507677 7_3:-2381794 Msa1089040:intron
AGGATCTGGAGTGTTGTCAT+TGG 0.509319 7_3:-2379768 Msa1089040:three_prime_UTR
TTTAAGTGCATGTCTCCATC+TGG 0.511692 7_3:-2377407 Msa1089040:intron
AATATGAAATTAGATAAGAA+AGG 0.516073 7_3:-2379222 Msa1089040:intron
CCACAATCTCTCCCTGGAAG+AGG 0.518654 7_3:-2376523 Msa1089040:three_prime_UTR
AACAGAAGTGCTTGGATAGA+GGG 0.518754 7_3:-2378793 Msa1089040:intron
CATTATTACATTTGAAGCAG+TGG 0.519521 7_3:-2376028 Msa1089040:intron
ATACATACAAGTGCTGGAGT+TGG 0.523075 7_3:+2379074 None:intergenic
TTTCAAGGAACAGAAGTGCT+TGG 0.526048 7_3:-2378801 Msa1089040:three_prime_UTR
GGTGTAGATGCGACCAAGCA+AGG 0.526293 7_3:+2381932 None:intergenic
TGTTTCAATCTATATGAGAA+TGG 0.532481 7_3:+2375259 None:intergenic
ATATGAAATTAGATAAGAAA+GGG 0.533263 7_3:-2379221 Msa1089040:intron
TGAAGGAACGTTGTTAATTG+TGG 0.534020 7_3:-2379816 Msa1089040:three_prime_UTR
GAAGGAACGTTGTTAATTGT+GGG 0.537165 7_3:-2379815 Msa1089040:three_prime_UTR
GACCAAGCAAGCGTGGCGAT+GGG 0.539781 7_3:-2376501 Msa1089040:three_prime_UTR
AAGTTGTTTGCATAAGCCAT+TGG 0.545433 7_3:+2375528 None:intergenic
TAACAAGATGCCAACCCAAA+CGG 0.553592 7_3:+2382030 None:intergenic
TTGTGGCGATGTGCATGGTC+AGG 0.553831 7_3:-2378576 Msa1089040:intron
GGTTGATGCATGACTTGCTA+TGG 0.557053 7_3:-2376552 Msa1089040:three_prime_UTR
TTGTTTATCACATGAGCCAA+AGG 0.562219 7_3:+2376773 None:intergenic
ATTTCCTCTAGCTATATACA+TGG 0.570325 7_3:+2376901 None:intergenic
TGGCTATTGCTCATTCACGC+TGG 0.573120 7_3:-2379742 Msa1089040:three_prime_UTR
ACAGTTATGTCAACAAGAGA+AGG 0.573846 7_3:+2378623 None:intergenic
AAATAATTGAATGAGCATGA+AGG 0.582838 7_3:-2379833 Msa1089040:three_prime_UTR
ATTTGCTCACCTTTGAAACA+AGG 0.585157 7_3:+2381785 None:intergenic
AGTGATCCACAATCTCTCCC+TGG 0.590132 7_3:-2376529 Msa1089040:three_prime_UTR
ACTGTTTGTGGCGATGTGCA+TGG 0.597060 7_3:-2378581 Msa1089040:three_prime_UTR
ATCTCATAAATCAAAGCACA+AGG 0.599543 7_3:-2376338 Msa1089040:three_prime_UTR
CTTGTTACAGATTGTTGTTG+CGG 0.603792 7_3:-2382014 Msa1089040:five_prime_UTR
ACACCCTGATGTTAAGCCAA+TGG 0.605052 7_3:-2375544 Msa1089040:three_prime_UTR
GGAAGAGGACCAAGCAAGCG+TGG 0.607947 7_3:-2376508 Msa1089040:three_prime_UTR
AAGCCATTGGCTTAACATCA+GGG 0.608784 7_3:+2375541 None:intergenic
GATGCGAAATATGATGATGA+TGG 0.610366 7_3:-2379969 Msa1089040:CDS
ATTCTTGATCCCGAATATCG+TGG 0.612151 7_3:+2378872 None:intergenic
TGTGTCTTACCTTCATCAGG+AGG 0.622526 7_3:+2376665 None:intergenic
AACCTTTGATTGTGATGCAA+CGG 0.623114 7_3:+2381874 None:intergenic
TCAGCCATGTATATAGCTAG+AGG 0.623458 7_3:-2376905 Msa1089040:intron
ATTGGCTTAACATCAGGGTG+TGG 0.628926 7_3:+2375546 None:intergenic
AGAAAGGGAAGAAACATACA+AGG 0.642650 7_3:-2379206 Msa1089040:three_prime_UTR
TTTATGCAGAAGGGTAACAA+AGG 0.652175 7_3:-2376090 Msa1089040:intron
TACAAGTACAAGAAGTATCG+AGG 0.660875 7_3:-2379181 Msa1089040:three_prime_UTR
CTTTGATTGTGATGCAACGG+TGG 0.667964 7_3:+2381877 None:intergenic
ATGCGACCAAGCAAGGCCAA+GGG 0.673982 7_3:+2381939 None:intergenic
GGTTATGAGATTCAACATGA+CGG 0.684432 7_3:-2376316 Msa1089040:three_prime_UTR
ATTGCACGAGTTAAACAACA+AGG 0.687961 7_3:+2381832 None:intergenic
TTCTCATATAGATTGAAACA+CGG 0.693554 7_3:-2375256 Msa1089040:three_prime_UTR
TGTGGGTGCACACATAGTGA+TGG 0.702135 7_3:-2379798 Msa1089040:three_prime_UTR
GTTACTATACAAAACAACAG+TGG 0.715204 7_3:+2375370 None:intergenic
TCTCATAAATCAAAGCACAA+GGG 0.729815 7_3:-2376337 Msa1089040:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAGTTTACAAATTAATTAT+TGG - chr7_3:2375769-2375788 Msa1089040:intron 10.0%
!! TAGTTTACAAATTAATTATT+GGG - chr7_3:2375770-2375789 Msa1089040:intron 10.0%
!!! AAATATTTTTAACCTTTAAA+TGG - chr7_3:2376881-2376900 Msa1089040:three_prime_UTR 10.0%
!!! CTCTTATTTATAATTTAATT+AGG + chr7_3:2377004-2377023 None:intergenic 10.0%
!!! ATATTTTATTAAAATTTGTC+AGG + chr7_3:2379483-2379502 None:intergenic 10.0%
!!! TTTTTTCCAAATAATTAATA+CGG + chr7_3:2379972-2379991 None:intergenic 10.0%
!!! TTTTTTCCTTAATTAGTTTA+TGG - chr7_3:2375577-2375596 Msa1089040:intron 15.0%
!!! AAGAAATAACAAAATTTTCA+AGG - chr7_3:2376154-2376173 Msa1089040:intron 15.0%
!! AAAAAAAAAACACTCTTATT+AGG - chr7_3:2376689-2376708 Msa1089040:three_prime_UTR 15.0%
!! TTAAAGGTTAAATATCTTAA+TGG + chr7_3:2376919-2376938 None:intergenic 15.0%
!! TAAGATATTTAACCTTTAAA+TGG - chr7_3:2376920-2376939 Msa1089040:intron 15.0%
!!! ATTTTAGAAACATATCTTAA+AGG + chr7_3:2376958-2376977 None:intergenic 15.0%
!! TATGAAAAACATAATAGTTA+TGG + chr7_3:2377182-2377201 None:intergenic 15.0%
!!! TAACTATTATGTTTTTCATA+AGG - chr7_3:2377182-2377201 Msa1089040:intron 15.0%
!!! AACTATTATGTTTTTCATAA+GGG - chr7_3:2377183-2377202 Msa1089040:intron 15.0%
!!! AACAAAATTTTTAATTGACT+TGG + chr7_3:2377367-2377386 None:intergenic 15.0%
!! AATATGAAATTAGATAAGAA+AGG - chr7_3:2378045-2378064 Msa1089040:intron 15.0%
!! ATATGAAATTAGATAAGAAA+GGG - chr7_3:2378046-2378065 Msa1089040:intron 15.0%
!! ATATAAGAAAAAATCAATGA+TGG + chr7_3:2378833-2378852 None:intergenic 15.0%
!!! ATTTTTACTAAAAATGGTAA+AGG - chr7_3:2379539-2379558 Msa1089040:intron 15.0%
!! CATGAAAAATAAAATTGAAA+GGG + chr7_3:2379700-2379719 None:intergenic 15.0%
!! TCATGAAAAATAAAATTGAA+AGG + chr7_3:2379701-2379720 None:intergenic 15.0%
!!! TTTTTCCAAATAATTAATAC+GGG + chr7_3:2379971-2379990 None:intergenic 15.0%
!! GTATTAATTATTTGGAAAAA+AGG - chr7_3:2379971-2379990 Msa1089040:CDS 15.0%
!!! TTCTTTCTTGAATAATTTTA+CGG - chr7_3:2381043-2381062 Msa1089040:intron 15.0%
!!! TAACTGTTAATTTGATTTTT+AGG - chr7_3:2381916-2381935 Msa1089040:CDS 15.0%
!! AGATTACCATAAACTAATTA+AGG + chr7_3:2375586-2375605 None:intergenic 20.0%
!!! TAATTAGTTTATGGTAATCT+TGG - chr7_3:2375586-2375605 Msa1089040:intron 20.0%
!! AATCATATATCTCCATTTAA+AGG + chr7_3:2376896-2376915 None:intergenic 20.0%
!! AATCAAATATCTCCATTTAA+AGG + chr7_3:2376935-2376954 None:intergenic 20.0%
!!! TTTTTTTTCTTCTTTCATTG+AGG - chr7_3:2377099-2377118 Msa1089040:intron 20.0%
!! TCAAAAATCTCAAATGAATT+AGG + chr7_3:2377861-2377880 None:intergenic 20.0%
!!! ATATTTTCTTTATTTGTTCG+CGG + chr7_3:2377979-2377998 None:intergenic 20.0%
!!! GTTTTATTTTTGTTTTGTGA+TGG + chr7_3:2378119-2378138 None:intergenic 20.0%
!! TTATAGAATAGCAAGATAAT+AGG + chr7_3:2378938-2378957 None:intergenic 20.0%
!! AAGAATGTATAATATATGCA+GGG + chr7_3:2379413-2379432 None:intergenic 20.0%
!! TCTCAGAAAATGTATAAATA+TGG + chr7_3:2379566-2379585 None:intergenic 20.0%
!!! ATATTTATACATTTTCTGAG+AGG - chr7_3:2379565-2379584 Msa1089040:intron 20.0%
!! AAATGGAAATAAATTCAACA+AGG + chr7_3:2379635-2379654 None:intergenic 20.0%
!! ACATGTATAATCAGAATAAA+TGG + chr7_3:2379652-2379671 None:intergenic 20.0%
!! TTATTCTGATTATACATGTT+TGG - chr7_3:2379653-2379672 Msa1089040:intron 20.0%
!! AAAAATAAAATTGAAAGGGT+TGG + chr7_3:2379696-2379715 None:intergenic 20.0%
!! GAAAATCCATATCTATTTAA+TGG - chr7_3:2379782-2379801 Msa1089040:three_prime_UTR 20.0%
!! TCTATAAACTATATGACTTA+CGG - chr7_3:2380021-2380040 Msa1089040:CDS 20.0%
!! AATAAATTAAGCATCTAATC+AGG + chr7_3:2380207-2380226 None:intergenic 20.0%
!!! TACAATACAAAGAAGTATTA+AGG + chr7_3:2380661-2380680 None:intergenic 20.0%
!! TTTGTTTATGTATCTATGTT+TGG - chr7_3:2380683-2380702 Msa1089040:intron 20.0%
!! TTCTTGAAGGATAATAATTT+AGG - chr7_3:2380822-2380841 Msa1089040:intron 20.0%
!!! TACTTAATTTCTTATTTCAC+TGG - chr7_3:2380865-2380884 Msa1089040:intron 20.0%
!! GTAAAATTATTCAAGAAAGA+AGG + chr7_3:2381044-2381063 None:intergenic 20.0%
!!! ATTTGTTTCTGTTTTCATCT+TGG - chr7_3:2375542-2375561 Msa1089040:three_prime_UTR 25.0%
! TTTGATGTTGTATTTACAGT+TGG - chr7_3:2375668-2375687 Msa1089040:intron 25.0%
! TTGTATTTACAGTTGGAAAT+TGG - chr7_3:2375675-2375694 Msa1089040:intron 25.0%
!!! TCCTAATTTGTTGATTCATT+GGG - chr7_3:2376043-2376062 Msa1089040:three_prime_UTR 25.0%
!!! TAACAAAATTTTCAAGGATG+AGG - chr7_3:2376160-2376179 Msa1089040:intron 25.0%
! AAAACTGCCAAAAAACAAAT+GGG + chr7_3:2376473-2376492 None:intergenic 25.0%
! AAAAACTGCCAAAAAACAAA+TGG + chr7_3:2376474-2376493 None:intergenic 25.0%
!!! TTTTTTGGCAGTTTTTTTCT+AGG - chr7_3:2376478-2376497 Msa1089040:three_prime_UTR 25.0%
! AGTCGTTGCATTAATAATAT+TGG - chr7_3:2376654-2376673 Msa1089040:intron 25.0%
!! AAACACTCTTATTAGGTTTT+TGG - chr7_3:2376696-2376715 Msa1089040:three_prime_UTR 25.0%
!!! AGATAAAGAGTGTTAATACA+GGG + chr7_3:2376727-2376746 None:intergenic 25.0%
!!! TAGATAAAGAGTGTTAATAC+AGG + chr7_3:2376728-2376747 None:intergenic 25.0%
!!! TGAGCTCCTTATTATTTTAA+CGG - chr7_3:2376824-2376843 Msa1089040:three_prime_UTR 25.0%
! TGAACACCGTTAAAATAATA+AGG + chr7_3:2376833-2376852 None:intergenic 25.0%
!!! TTTAATTGACTTGGTGTATT+TGG + chr7_3:2377358-2377377 None:intergenic 25.0%
! AAATAATTGAATGAGCATGA+AGG - chr7_3:2377434-2377453 Msa1089040:three_prime_UTR 25.0%
!! TTTTAATGTATATGCCCAAT+AGG - chr7_3:2377581-2377600 Msa1089040:intron 25.0%
!!! TTGACGATTAAGGTATTTTA+TGG + chr7_3:2377622-2377641 None:intergenic 25.0%
!! TAGAGAAATTTTATGCATGT+TGG - chr7_3:2377681-2377700 Msa1089040:intron 25.0%
! TTATATAGTAGCTACAATTG+TGG - chr7_3:2377751-2377770 Msa1089040:intron 25.0%
! ACCTAAAACCAATTAATCTT+AGG - chr7_3:2377826-2377845 Msa1089040:intron 25.0%
!!! TCCTAAGATTAATTGGTTTT+AGG + chr7_3:2377830-2377849 None:intergenic 25.0%
! TCAATCATCCTAAGATTAAT+TGG + chr7_3:2377837-2377856 None:intergenic 25.0%
! ATCATTATCAGTAATGCATT+AGG - chr7_3:2377896-2377915 Msa1089040:intron 25.0%
!! CACATGACATGAAAATATTT+TGG - chr7_3:2378344-2378363 Msa1089040:intron 25.0%
! GAAAATGATGAATGATTTCA+AGG - chr7_3:2378451-2378470 Msa1089040:intron 25.0%
!!! TTTTGTTTGCAACAAAATCT+TGG + chr7_3:2378606-2378625 None:intergenic 25.0%
!! GATTTTGTTGCAAACAAAAA+AGG - chr7_3:2378607-2378626 Msa1089040:three_prime_UTR 25.0%
! TTTCGCAAATAATAAACCAA+GGG + chr7_3:2378739-2378758 None:intergenic 25.0%
!! TTTTCGCAAATAATAAACCA+AGG + chr7_3:2378740-2378759 None:intergenic 25.0%
! TTCTTTGTTACGTAGATATT+TGG - chr7_3:2378787-2378806 Msa1089040:intron 25.0%
! TTTATTTACACTTTGATCAC+AGG - chr7_3:2378894-2378913 Msa1089040:intron 25.0%
! AATTTCTTTGACCATTTATG+TGG - chr7_3:2379036-2379055 Msa1089040:intron 25.0%
! GATAATGCATAATTTATGCA+GGG - chr7_3:2379191-2379210 Msa1089040:three_prime_UTR 25.0%
! ATAATGCATAATTTATGCAG+GGG - chr7_3:2379192-2379211 Msa1089040:three_prime_UTR 25.0%
! GCTACTTGACTAAAAAAAAA+GGG - chr7_3:2379277-2379296 Msa1089040:intron 25.0%
!!! CTAAAGGTAGATCATTTTTT+TGG - chr7_3:2379306-2379325 Msa1089040:intron 25.0%
!! GAACTCATACATTTTAAATG+CGG - chr7_3:2379350-2379369 Msa1089040:intron 25.0%
! AGAATGTATAATATATGCAG+GGG + chr7_3:2379412-2379431 None:intergenic 25.0%
! GAAGAATGTATAATATATGC+AGG + chr7_3:2379414-2379433 None:intergenic 25.0%
! TAAAATTTGTCAGGAATAGA+AGG + chr7_3:2379474-2379493 None:intergenic 25.0%
!!! TTGAATATTTTTGAGCTCAA+TGG - chr7_3:2379746-2379765 Msa1089040:three_prime_UTR 25.0%
!!! TGAATATTTTTGAGCTCAAT+GGG - chr7_3:2379747-2379766 Msa1089040:three_prime_UTR 25.0%
! AAGTCACCATTAAATAGATA+TGG + chr7_3:2379791-2379810 None:intergenic 25.0%
! ATATAATGAAACCTAAGAAG+AGG + chr7_3:2380139-2380158 None:intergenic 25.0%
!!! TCAATAATGCTTATTTTGTG+TGG - chr7_3:2380254-2380273 Msa1089040:intron 25.0%
!!! AACAAGATATTTGGTTTTGA+GGG - chr7_3:2380407-2380426 Msa1089040:intron 25.0%
! CAAATTTGTCAAAATGTTTG+CGG - chr7_3:2380454-2380473 Msa1089040:intron 25.0%
!! AATTTAGGTATGTTTTCCAT+TGG - chr7_3:2380837-2380856 Msa1089040:intron 25.0%
! GAAATTAAGTATCAAACCAA+TGG + chr7_3:2380856-2380875 None:intergenic 25.0%
! ATAATGTTAGGTTTCAAATC+AGG + chr7_3:2381225-2381244 None:intergenic 25.0%
! GCTTCAAATGTAATAATGTT+AGG + chr7_3:2381237-2381256 None:intergenic 25.0%
!! AGAATCAGTGTTGTTAAATA+TGG - chr7_3:2381371-2381390 Msa1089040:intron 25.0%
!! GAATCAGTGTTGTTAAATAT+GGG - chr7_3:2381372-2381391 Msa1089040:intron 25.0%
! ATATCTTCATTCAATTTGTG+AGG - chr7_3:2381640-2381659 Msa1089040:intron 25.0%
!!! GTATTGATTATGAGAACAAT+CGG + chr7_3:2381768-2381787 None:intergenic 25.0%
!!! TTTGAAAAGTTTTAAGCACA+AGG - chr7_3:2381838-2381857 Msa1089040:CDS 25.0%
!!! TTGAAAAGTTTTAAGCACAA+GGG - chr7_3:2381839-2381858 Msa1089040:CDS 25.0%
!!! TTTGATTTTTAGGATGCATT+TGG - chr7_3:2381926-2381945 Msa1089040:CDS 25.0%
! TGTTTCAATCTATATGAGAA+TGG + chr7_3:2382011-2382030 None:intergenic 25.0%
! TTCTCATATAGATTGAAACA+CGG - chr7_3:2382011-2382030 Msa1089040:five_prime_UTR 25.0%
!!! TTTTGTTATATGGAAGATGA+TGG + chr7_3:2382113-2382132 None:intergenic 25.0%
! CATCTTCCATATAACAAAAT+CGG - chr7_3:2382114-2382133 Msa1089040:five_prime_UTR 25.0%
!!! TGTTTTTATCACGATTTTGA+GGG + chr7_3:2382142-2382161 None:intergenic 25.0%
!!! TTGTTTTTATCACGATTTTG+AGG + chr7_3:2382143-2382162 None:intergenic 25.0%
AGAAAAAAGAAGCTGATATG+AGG - chr7_3:2375149-2375168 Msa1089040:three_prime_UTR 30.0%
GAAAAAAGAAGCTGATATGA+GGG - chr7_3:2375150-2375169 Msa1089040:three_prime_UTR 30.0%
AAAAAAGAAGCTGATATGAG+GGG - chr7_3:2375151-2375170 Msa1089040:three_prime_UTR 30.0%
AAATACAACATCAAACAGGT+CGG + chr7_3:2375663-2375682 None:intergenic 30.0%
CTGTAAATACAACATCAAAC+AGG + chr7_3:2375667-2375686 None:intergenic 30.0%
TATGGCAAAAGGTAATGAAT+TGG - chr7_3:2375997-2376016 Msa1089040:intron 30.0%
CAATGAATCAACAAATTAGG+AGG + chr7_3:2376044-2376063 None:intergenic 30.0%
!! CTCCTAATTTGTTGATTCAT+TGG - chr7_3:2376042-2376061 Msa1089040:three_prime_UTR 30.0%
TCCCAATGAATCAACAAATT+AGG + chr7_3:2376047-2376066 None:intergenic 30.0%
AAGGAATAAGAAAGCTCTTA+AGG - chr7_3:2376085-2376104 Msa1089040:intron 30.0%
AGGAATAAGAAAGCTCTTAA+GGG - chr7_3:2376086-2376105 Msa1089040:intron 30.0%
TTAAGGGATTATGGCTTATT+TGG - chr7_3:2376102-2376121 Msa1089040:intron 30.0%
!! TTTTGCTGTGTTTGTTTTTC+TGG - chr7_3:2376392-2376411 Msa1089040:intron 30.0%
!! TTTGCTGTGTTTGTTTTTCT+GGG - chr7_3:2376393-2376412 Msa1089040:intron 30.0%
!! TTTTACGCCCATTTGTTTTT+TGG - chr7_3:2376463-2376482 Msa1089040:three_prime_UTR 30.0%
!!! TGCTGTTTTTTTCAGTTATG+TGG - chr7_3:2376555-2376574 Msa1089040:three_prime_UTR 30.0%
!!! GCTGTTTTTTTCAGTTATGT+GGG - chr7_3:2376556-2376575 Msa1089040:intron 30.0%
!!! CTGTTTTTTTCAGTTATGTG+GGG - chr7_3:2376557-2376576 Msa1089040:intron 30.0%
!!! TGTTTTTTTCAGTTATGTGG+GGG - chr7_3:2376558-2376577 Msa1089040:intron 30.0%
ATACAAGAAAAACGATAGAG+CGG + chr7_3:2376607-2376626 None:intergenic 30.0%
GTTGCATTAATAATATTGGC+TGG - chr7_3:2376658-2376677 Msa1089040:intron 30.0%
AAGAGACTAGACATTGTTTA+TGG - chr7_3:2377019-2377038 Msa1089040:intron 30.0%
AGAGACTAGACATTGTTTAT+GGG - chr7_3:2377020-2377039 Msa1089040:intron 30.0%
AAAGTAAACGTTTGCGAAAT+CGG - chr7_3:2377057-2377076 Msa1089040:intron 30.0%
TGAAAACTGTTACGAAATTG+AGG + chr7_3:2377231-2377250 None:intergenic 30.0%
GGAAAAAAACTTGACGATTA+AGG + chr7_3:2377632-2377651 None:intergenic 30.0%
!!! GATTTTTGAAACAAGTCAAG+TGG - chr7_3:2377872-2377891 Msa1089040:intron 30.0%
AGTAATGCATTAGGAAATAG+TGG - chr7_3:2377905-2377924 Msa1089040:intron 30.0%
!!! TTTTTGTTTTGTGATGGTCT+TGG + chr7_3:2378113-2378132 None:intergenic 30.0%
!!! TTGCTTTTTGTCTTTGCTTT+TGG + chr7_3:2378144-2378163 None:intergenic 30.0%
CACAAGAAAATATCCAAACA+AGG + chr7_3:2378245-2378264 None:intergenic 30.0%
! TTTTCAATTACTGCCTTGAT+TGG - chr7_3:2378266-2378285 Msa1089040:intron 30.0%
TACGCAACAATCTTCTAAAT+GGG + chr7_3:2378308-2378327 None:intergenic 30.0%
ATACGCAACAATCTTCTAAA+TGG + chr7_3:2378309-2378328 None:intergenic 30.0%
AGAAGGAGATACTATTACTT+TGG - chr7_3:2378418-2378437 Msa1089040:intron 30.0%
AAATGTATTTGCATTTGTCC+TGG - chr7_3:2378559-2378578 Msa1089040:intron 30.0%
! ACAGTAACATGTTTTCCATT+AGG + chr7_3:2378671-2378690 None:intergenic 30.0%
AATTGTTGCTAGTAACTTCA+AGG - chr7_3:2378761-2378780 Msa1089040:intron 30.0%
TTTGTTACGTAGATATTTGG+AGG - chr7_3:2378790-2378809 Msa1089040:intron 30.0%
!!! ATTGGGGAGCTATTTTTTTA+GGG - chr7_3:2379063-2379082 Msa1089040:intron 30.0%
TTATATGGGGCTATCTAATA+TGG - chr7_3:2379129-2379148 Msa1089040:three_prime_UTR 30.0%
TATATGGGGCTATCTAATAT+GGG - chr7_3:2379130-2379149 Msa1089040:three_prime_UTR 30.0%
GGATAATGCATAATTTATGC+AGG - chr7_3:2379190-2379209 Msa1089040:three_prime_UTR 30.0%
TACCTTAAAGGTGAATATGT+GGG + chr7_3:2379239-2379258 None:intergenic 30.0%
TTACCTTAAAGGTGAATATG+TGG + chr7_3:2379240-2379259 None:intergenic 30.0%
GCTAGAGAAATTTACCTTAA+AGG + chr7_3:2379251-2379270 None:intergenic 30.0%
GGCTACTTGACTAAAAAAAA+AGG - chr7_3:2379276-2379295 Msa1089040:intron 30.0%
AAAAAAAGGGTCAGATCTAA+AGG - chr7_3:2379290-2379309 Msa1089040:intron 30.0%
!!! TTATTTTTGCCTCATGTGTA+CGG - chr7_3:2379597-2379616 Msa1089040:intron 30.0%
! AGATATGGATTTTCTTCTGA+AGG + chr7_3:2379776-2379795 None:intergenic 30.0%
! TCTTTCTTTATTAGCCTGTT+AGG - chr7_3:2379894-2379913 Msa1089040:three_prime_UTR 30.0%
TGGTAAAAAGAAAACCTAAC+AGG + chr7_3:2379911-2379930 None:intergenic 30.0%
GAAGTCCCGTATTAATTATT+TGG - chr7_3:2379963-2379982 Msa1089040:CDS 30.0%
TTGAGCAACATATAAATGAG+AGG - chr7_3:2379997-2380016 Msa1089040:CDS 30.0%
!! TCACTTGTGTAATTGCTTTT+GGG - chr7_3:2380068-2380087 Msa1089040:intron 30.0%
!!! TAATGCTTATTTTGTGTGGT+TGG - chr7_3:2380258-2380277 Msa1089040:intron 30.0%
TAACTAAGTGAAGTGAAAAG+AGG + chr7_3:2380304-2380323 None:intergenic 30.0%
ATTTCCTCTAGCTATATACA+TGG + chr7_3:2380369-2380388 None:intergenic 30.0%
! AAGAGCATGAACAAGATATT+TGG - chr7_3:2380398-2380417 Msa1089040:intron 30.0%
!!! GAACAAGATATTTGGTTTTG+AGG - chr7_3:2380406-2380425 Msa1089040:intron 30.0%
AGTATTCAACTGTTTACCTT+TGG - chr7_3:2380478-2380497 Msa1089040:intron 30.0%
CTCAAATCCGATCAATTAAT+CGG - chr7_3:2380570-2380589 Msa1089040:intron 30.0%
CACAAAACCGATTAATTGAT+CGG + chr7_3:2380580-2380599 None:intergenic 30.0%
TATCTATGTTTGGTATGTGT+AGG - chr7_3:2380693-2380712 Msa1089040:intron 30.0%
ATCTATGTTTGGTATGTGTA+GGG - chr7_3:2380694-2380713 Msa1089040:intron 30.0%
TGTTACAAAAAGGTTCTTGA+AGG - chr7_3:2380809-2380828 Msa1089040:intron 30.0%
ATCTCATAAATCAAAGCACA+AGG - chr7_3:2380929-2380948 Msa1089040:intron 30.0%
TCTCATAAATCAAAGCACAA+GGG - chr7_3:2380930-2380949 Msa1089040:intron 30.0%
ACATTAATATCATAAGCGTG+TGG + chr7_3:2381102-2381121 None:intergenic 30.0%
TCAGGATATGTATACTTCAT+GGG + chr7_3:2381146-2381165 None:intergenic 30.0%
ATCAGGATATGTATACTTCA+TGG + chr7_3:2381147-2381166 None:intergenic 30.0%
GCATAAAACAATGGAAAATC+AGG + chr7_3:2381164-2381183 None:intergenic 30.0%
!! TTTCCATTGTTTTATGCAGA+AGG - chr7_3:2381167-2381186 Msa1089040:intron 30.0%
!! TTCCATTGTTTTATGCAGAA+GGG - chr7_3:2381168-2381187 Msa1089040:intron 30.0%
! CATTATTACATTTGAAGCAG+TGG - chr7_3:2381239-2381258 Msa1089040:intron 30.0%
TATTGCCAATTTGTGAATGA+TGG - chr7_3:2381453-2381472 Msa1089040:intron 30.0%
TTCAAAACAGCATCAATCAT+TGG + chr7_3:2381824-2381843 None:intergenic 30.0%
TTAAGCACAAGGGAAATATT+TGG - chr7_3:2381849-2381868 Msa1089040:CDS 30.0%
ATATTTGGCTAGAGAAGATT+TGG - chr7_3:2381864-2381883 Msa1089040:CDS 30.0%
GTTACTATACAAAACAACAG+TGG + chr7_3:2381900-2381919 None:intergenic 30.0%
!! ATATGGAAGATGATGGAATT+TGG + chr7_3:2382106-2382125 None:intergenic 30.0%
! TTTTCAGCATTTGATCCGTT+TGG - chr7_3:2375222-2375241 Msa1089040:three_prime_UTR 35.0%
TTTCAGCATTTGATCCGTTT+GGG - chr7_3:2375223-2375242 Msa1089040:three_prime_UTR 35.0%
! CTTGTTACAGATTGTTGTTG+CGG - chr7_3:2375253-2375272 Msa1089040:three_prime_UTR 35.0%
AACCTTTGATTGTGATGCAA+CGG + chr7_3:2375396-2375415 None:intergenic 35.0%
ATTGCACGAGTTAAACAACA+AGG + chr7_3:2375438-2375457 None:intergenic 35.0%
! CTACCTAAACCTTGTTTCAA+AGG - chr7_3:2375473-2375492 Msa1089040:three_prime_UTR 35.0%
!! TCACCTTTGAAACAAGGTTT+AGG + chr7_3:2375479-2375498 None:intergenic 35.0%
!! ATTTGCTCACCTTTGAAACA+AGG + chr7_3:2375485-2375504 None:intergenic 35.0%
GCAAAAGGTAATGAATTGGA+TGG - chr7_3:2376001-2376020 Msa1089040:intron 35.0%
!! TGTTGATTCATTGGGATTGT+TGG - chr7_3:2376051-2376070 Msa1089040:three_prime_UTR 35.0%
! GTTGATTCATTGGGATTGTT+GGG - chr7_3:2376052-2376071 Msa1089040:three_prime_UTR 35.0%
TTGATTCATTGGGATTGTTG+GGG - chr7_3:2376053-2376072 Msa1089040:three_prime_UTR 35.0%
AGAAAGCTCTTAAGGGATTA+TGG - chr7_3:2376093-2376112 Msa1089040:intron 35.0%
TTATTTGGCATACTACTGTG+TGG - chr7_3:2376117-2376136 Msa1089040:intron 35.0%
TATTTGGCATACTACTGTGT+GGG - chr7_3:2376118-2376137 Msa1089040:intron 35.0%
!! ATTTTCAAGGATGAGGTTTG+TGG - chr7_3:2376167-2376186 Msa1089040:intron 35.0%
TTGTGGAATTGAGGAAATTG+TGG - chr7_3:2376184-2376203 Msa1089040:intron 35.0%
CATTCGTAGAACATACAAGT+AGG + chr7_3:2376260-2376279 None:intergenic 35.0%
CTACTTGTATGTTCTACGAA+TGG - chr7_3:2376258-2376277 Msa1089040:intron 35.0%
CATACCTATAACAAAACCGA+TGG + chr7_3:2376323-2376342 None:intergenic 35.0%
!!! CATCGGTTTTGTTATAGGTA+TGG - chr7_3:2376321-2376340 Msa1089040:three_prime_UTR 35.0%
!! TTTTGTTATAGGTATGGAGG+TGG - chr7_3:2376327-2376346 Msa1089040:three_prime_UTR 35.0%
!!! TTTTTTTCTAGGTGTGTGCT+GGG - chr7_3:2376489-2376508 Msa1089040:three_prime_UTR 35.0%
!! TGTAAAGCCCACTTAGTTTT+TGG - chr7_3:2376517-2376536 Msa1089040:three_prime_UTR 35.0%
!!! GTTTTTTTCAGTTATGTGGG+GGG - chr7_3:2376559-2376578 Msa1089040:intron 35.0%
!!! TTTTTTTCAGTTATGTGGGG+GGG - chr7_3:2376560-2376579 Msa1089040:intron 35.0%
! ACACTCTTTATCTAAAGCCT+TGG - chr7_3:2376734-2376753 Msa1089040:three_prime_UTR 35.0%
ACTAGACATTGTTTATGGGA+AGG - chr7_3:2377024-2377043 Msa1089040:intron 35.0%
GGGAGTAATATTTATATGCG+TGG - chr7_3:2377203-2377222 Msa1089040:intron 35.0%
! GATGCGAAATATGATGATGA+TGG - chr7_3:2377298-2377317 Msa1089040:intron 35.0%
TGAAGGAACGTTGTTAATTG+TGG - chr7_3:2377451-2377470 Msa1089040:three_prime_UTR 35.0%
GAAGGAACGTTGTTAATTGT+GGG - chr7_3:2377452-2377471 Msa1089040:three_prime_UTR 35.0%
CACATAGTGATGGTTGTAAT+AGG - chr7_3:2377479-2377498 Msa1089040:three_prime_UTR 35.0%
!! ACATGAGAGTACTTCCTATT+GGG + chr7_3:2377598-2377617 None:intergenic 35.0%
!! AACATGAGAGTACTTCCTAT+TGG + chr7_3:2377599-2377618 None:intergenic 35.0%
TACTTATGGAAAGGTTTGTG+AGG + chr7_3:2377653-2377672 None:intergenic 35.0%
ACTCTCAAGTACTTATGGAA+AGG + chr7_3:2377662-2377681 None:intergenic 35.0%
TCTCTACTCTCAAGTACTTA+TGG + chr7_3:2377667-2377686 None:intergenic 35.0%
ATAGTAGCTACAATTGTGGT+TGG - chr7_3:2377755-2377774 Msa1089040:intron 35.0%
TAAGCTTATACCATGCCTAA+TGG + chr7_3:2377797-2377816 None:intergenic 35.0%
AGAAAGGGAAGAAACATACA+AGG - chr7_3:2378061-2378080 Msa1089040:intron 35.0%
!! TACAAGTACAAGAAGTATCG+AGG - chr7_3:2378086-2378105 Msa1089040:intron 35.0%
AGCAAAGACAAAAAGCAACA+TGG - chr7_3:2378146-2378165 Msa1089040:intron 35.0%
TAAGAGATACATACAAGTGC+TGG + chr7_3:2378202-2378221 None:intergenic 35.0%
!! TAGTTTTTGGATGCCAATCA+AGG + chr7_3:2378282-2378301 None:intergenic 35.0%
! TCTAAATGGGGCATAGTTTT+TGG + chr7_3:2378295-2378314 None:intergenic 35.0%
ACGCAACAATCTTCTAAATG+GGG + chr7_3:2378307-2378326 None:intergenic 35.0%
TATTCGGGATCAAGAATAGA+AGG - chr7_3:2378401-2378420 Msa1089040:intron 35.0%
! TTGTCCTGGTTCATTGTTTT+AGG - chr7_3:2378573-2378592 Msa1089040:intron 35.0%
CATACCTAAAACAATGAACC+AGG + chr7_3:2378580-2378599 None:intergenic 35.0%
ACAGTTATGTCAACAAGAGA+AGG + chr7_3:2378647-2378666 None:intergenic 35.0%
GTTGACATAACTGTTCCTAA+TGG - chr7_3:2378653-2378672 Msa1089040:three_prime_UTR 35.0%
GGAAAACATGTTACTGTTTG+TGG - chr7_3:2378674-2378693 Msa1089040:three_prime_UTR 35.0%
TACGTAGATATTTGGAGGAT+AGG - chr7_3:2378795-2378814 Msa1089040:three_prime_UTR 35.0%
ACGTAGATATTTGGAGGATA+GGG - chr7_3:2378796-2378815 Msa1089040:three_prime_UTR 35.0%
TTCTTTGACCATTTATGTGG+AGG - chr7_3:2379039-2379058 Msa1089040:intron 35.0%
TCTTTGACCATTTATGTGGA+GGG - chr7_3:2379040-2379059 Msa1089040:intron 35.0%
!!! GATTGGGGAGCTATTTTTTT+AGG - chr7_3:2379062-2379081 Msa1089040:intron 35.0%
!!! TTGGGGAGCTATTTTTTTAG+GGG - chr7_3:2379064-2379083 Msa1089040:intron 35.0%
ACCTTAAAGGTGAATATGTG+GGG + chr7_3:2379238-2379257 None:intergenic 35.0%
!! TTTTTAGTCAAGTAGCCTAG+CGG + chr7_3:2379273-2379292 None:intergenic 35.0%
AATGGTGACTTTGTAGATAG+AGG - chr7_3:2379800-2379819 Msa1089040:three_prime_UTR 35.0%
! AGATAGAGGATCATTTTCAG+TGG - chr7_3:2379814-2379833 Msa1089040:three_prime_UTR 35.0%
GGCTAATAAAGAAAGAGCTA+GGG + chr7_3:2379890-2379909 None:intergenic 35.0%
AGGCTAATAAAGAAAGAGCT+AGG + chr7_3:2379891-2379910 None:intergenic 35.0%
! CTCACTTGTGTAATTGCTTT+TGG - chr7_3:2380067-2380086 Msa1089040:intron 35.0%
AAACCTAAGAAGAGGTTGTT+TGG + chr7_3:2380131-2380150 None:intergenic 35.0%
TAAGCATCTAATCAGGTGAT+AGG + chr7_3:2380200-2380219 None:intergenic 35.0%
TTTCACTTCACTTAGTTAGC+TGG - chr7_3:2380306-2380325 Msa1089040:intron 35.0%
TTCACTTCACTTAGTTAGCT+GGG - chr7_3:2380307-2380326 Msa1089040:intron 35.0%
TTGTTTATCACATGAGCCAA+AGG + chr7_3:2380497-2380516 None:intergenic 35.0%
TTATGTGTCTTACCTTCATC+AGG + chr7_3:2380608-2380627 None:intergenic 35.0%
TTGGTGAGGATGTTACAAAA+AGG - chr7_3:2380799-2380818 Msa1089040:intron 35.0%
GGTTATGAGATTCAACATGA+CGG - chr7_3:2380951-2380970 Msa1089040:intron 35.0%
GTTACCTGATCACAGTAATT+TGG + chr7_3:2381002-2381021 None:intergenic 35.0%
AGGTTGTAACAAAAGAGACA+TGG + chr7_3:2381024-2381043 None:intergenic 35.0%
! AATAATTTTACGGCATGTGC+AGG - chr7_3:2381053-2381072 Msa1089040:intron 35.0%
TACCCTTCTGCATAAAACAA+TGG + chr7_3:2381173-2381192 None:intergenic 35.0%
TTTATGCAGAAGGGTAACAA+AGG - chr7_3:2381177-2381196 Msa1089040:intron 35.0%
AGGTGCTTCAAATCGAATAA+AGG + chr7_3:2381205-2381224 None:intergenic 35.0%
ATATCCACCATAAAACGCTT+TGG + chr7_3:2381484-2381503 None:intergenic 35.0%
!!! AAAGCGTTTTATGGTGGATA+TGG - chr7_3:2381483-2381502 Msa1089040:intron 35.0%
TTCAGTGTTATCAATTGCAG+TGG + chr7_3:2381550-2381569 None:intergenic 35.0%
TCAATTTGTGAGGTTATGTC+TGG - chr7_3:2381650-2381669 Msa1089040:intron 35.0%
! GTGTTGACATACTTTCTTCT+TGG - chr7_3:2381672-2381691 Msa1089040:intron 35.0%
GACATACTTTCTTCTTGGAT+TGG - chr7_3:2381677-2381696 Msa1089040:intron 35.0%
AAGTTGTTTGCATAAGCCAT+TGG + chr7_3:2381742-2381761 None:intergenic 35.0%
TGCTTACTTTACAGCGTATT+TGG - chr7_3:2381956-2381975 Msa1089040:CDS 35.0%
! CTCAAGAAGAACTTTTAACG+TGG + chr7_3:2382038-2382057 None:intergenic 35.0%
!! AGGGAACCGATTTTGTTATA+TGG + chr7_3:2382123-2382142 None:intergenic 35.0%
GAACGCAAACAAAATCACGA+CGG + chr7_3:2375187-2375206 None:intergenic 40.0%
!! TCGTGATTTTGTTTGCGTTC+CGG - chr7_3:2375187-2375206 Msa1089040:three_prime_UTR 40.0%
TAACAAGATGCCAACCCAAA+CGG + chr7_3:2375240-2375259 None:intergenic 40.0%
CAAAGTTGCTATGTCTTCTC+CGG - chr7_3:2375289-2375308 Msa1089040:three_prime_UTR 40.0%
GGTGAGCAAATCTCAATCAA+AGG - chr7_3:2375494-2375513 Msa1089040:three_prime_UTR 40.0%
! TAAGGGTGCGTTTGTTTCAA+GGG + chr7_3:2375909-2375928 None:intergenic 40.0%
! TTAAGGGTGCGTTTGTTTCA+AGG + chr7_3:2375910-2375929 None:intergenic 40.0%
TTGAAACAAACGCACCCTTA+AGG - chr7_3:2375909-2375928 Msa1089040:intron 40.0%
! ACATCTTTTCCTTCATTGCG+AGG - chr7_3:2375962-2375981 Msa1089040:intron 40.0%
! CACTAGCTTGATATGGCAAA+AGG - chr7_3:2375986-2376005 Msa1089040:intron 40.0%
! AGAAGATCAAAGTGCTCTCA+TGG - chr7_3:2376207-2376226 Msa1089040:intron 40.0%
GTATGTTCTACGAATGGTGT+TGG - chr7_3:2376264-2376283 Msa1089040:intron 40.0%
!!! CGGTTTTGTTATAGGTATGG+AGG - chr7_3:2376324-2376343 Msa1089040:three_prime_UTR 40.0%
!!! GTTTTTTTCTAGGTGTGTGC+TGG - chr7_3:2376488-2376507 Msa1089040:three_prime_UTR 40.0%
! CTCTTTATCTAAAGCCTTGG+AGG - chr7_3:2376737-2376756 Msa1089040:three_prime_UTR 40.0%
GTGATGGTTGTAATAGGATC+TGG - chr7_3:2377485-2377504 Msa1089040:three_prime_UTR 40.0%
TTGCTAGTTGTTGCTCCATT+AGG - chr7_3:2377779-2377798 Msa1089040:intron 40.0%
!! TACATACAAGTGCTGGAGTT+GGG + chr7_3:2378195-2378214 None:intergenic 40.0%
!! ATACATACAAGTGCTGGAGT+TGG + chr7_3:2378196-2378215 None:intergenic 40.0%
ATTCTTGATCCCGAATATCG+TGG + chr7_3:2378398-2378417 None:intergenic 40.0%
!! TTTCAAGGAACAGAAGTGCT+TGG - chr7_3:2378466-2378485 Msa1089040:intron 40.0%
!! AACAGAAGTGCTTGGATAGA+GGG - chr7_3:2378474-2378493 Msa1089040:intron 40.0%
GTATATGACAATTGCTCCCT+TGG - chr7_3:2378720-2378739 Msa1089040:intron 40.0%
TGTTGCTAGTAACTTCAAGG+TGG - chr7_3:2378764-2378783 Msa1089040:intron 40.0%
ACCATTTATGTGGAGGGATT+GGG - chr7_3:2379046-2379065 Msa1089040:intron 40.0%
!!! GGAGCTATTTTTTTAGGGGA+GGG - chr7_3:2379068-2379087 Msa1089040:intron 40.0%
ACCCCACATATTCACCTTTA+AGG - chr7_3:2379234-2379253 Msa1089040:intron 40.0%
TGTATAATATATGCAGGGGC+CGG + chr7_3:2379408-2379427 None:intergenic 40.0%
TTAAATCCTCCGTACACATG+AGG + chr7_3:2379609-2379628 None:intergenic 40.0%
AAGATCATAGAACTGCATGC+AGG + chr7_3:2379726-2379745 None:intergenic 40.0%
TTTAAGTGCATGTCTCCATC+TGG - chr7_3:2379860-2379879 Msa1089040:three_prime_UTR 40.0%
CACTTGCACAACACATTCTT+TGG + chr7_3:2379931-2379950 None:intergenic 40.0%
!! GTAATTGCTTTTGGGCAATG+CGG - chr7_3:2380076-2380095 Msa1089040:intron 40.0%
TGACCAAACAACCTCTTCTT+AGG - chr7_3:2380125-2380144 Msa1089040:intron 40.0%
TCAGCCATGTATATAGCTAG+AGG - chr7_3:2380362-2380381 Msa1089040:intron 40.0%
!!! GATATTTGGTTTTGAGGGTG+AGG - chr7_3:2380412-2380431 Msa1089040:intron 40.0%
! AAGAAAGTTTTCGTCGTCCA+TGG - chr7_3:2380515-2380534 Msa1089040:intron 40.0%
!!! GAGGCCTTTTTAGTGTTGAT+GGG - chr7_3:2380537-2380556 Msa1089040:intron 40.0%
!!! AGGCCTTTTTAGTGTTGATG+GGG - chr7_3:2380538-2380557 Msa1089040:intron 40.0%
TGACCCCATCAACACTAAAA+AGG + chr7_3:2380544-2380563 None:intergenic 40.0%
TGCTCCAAATTACTGTGATC+AGG - chr7_3:2380995-2381014 Msa1089040:intron 40.0%
AATATCATAAGCGTGTGGCA+CGG + chr7_3:2381097-2381116 None:intergenic 40.0%
TGGGCTATTGAAACACCATA+TGG - chr7_3:2381391-2381410 Msa1089040:intron 40.0%
GCTATTGAAACACCATATGG+CGG - chr7_3:2381394-2381413 Msa1089040:intron 40.0%
TGCCAATTTGTGAATGATGG+TGG - chr7_3:2381456-2381475 Msa1089040:intron 40.0%
GGCTTAGAATGTCGAATTCT+TGG - chr7_3:2381507-2381526 Msa1089040:intron 40.0%
AATGTCGAATTCTTGGCTTC+TGG - chr7_3:2381514-2381533 Msa1089040:intron 40.0%
!! AAGCCATTGGCTTAACATCA+GGG + chr7_3:2381729-2381748 None:intergenic 40.0%
!! TAAGCCATTGGCTTAACATC+AGG + chr7_3:2381730-2381749 None:intergenic 40.0%
!! CGTGATTTTGTTTGCGTTCC+GGG - chr7_3:2375188-2375207 Msa1089040:three_prime_UTR 45.0%
CTGAAAACCAACAGCAAACC+CGG + chr7_3:2375209-2375228 None:intergenic 45.0%
AGCATTTGATCCGTTTGGGT+TGG - chr7_3:2375227-2375246 Msa1089040:three_prime_UTR 45.0%
CTTTGATTGTGATGCAACGG+TGG + chr7_3:2375393-2375412 None:intergenic 45.0%
CACCGTTGCATCACAATCAA+AGG - chr7_3:2375391-2375410 Msa1089040:three_prime_UTR 45.0%
CAAGGCTTGAGCAAACATCT+TGG + chr7_3:2375420-2375439 None:intergenic 45.0%
CAAACAGGTCGGAAATTCGA+AGG + chr7_3:2375652-2375671 None:intergenic 45.0%
ACAAACGCACCCTTAAGGAT+TGG - chr7_3:2375914-2375933 Msa1089040:intron 45.0%
TCCTCTCGACCAATCCTTAA+GGG + chr7_3:2375926-2375945 None:intergenic 45.0%
TTCCTCTCGACCAATCCTTA+AGG + chr7_3:2375927-2375946 None:intergenic 45.0%
!! TTAAGGATTGGTCGAGAGGA+AGG - chr7_3:2375926-2375945 Msa1089040:intron 45.0%
TCATTGGGATTGTTGGGGTA+TGG - chr7_3:2376058-2376077 Msa1089040:three_prime_UTR 45.0%
ATACTACTGTGTGGGTGGTA+TGG - chr7_3:2376126-2376145 Msa1089040:intron 45.0%
GGATGAGGTTTGTGGAATTG+AGG - chr7_3:2376175-2376194 Msa1089040:intron 45.0%
! TCAAAGTGCTCTCATGGAGA+TGG - chr7_3:2376213-2376232 Msa1089040:intron 45.0%
TAACGGCGAAGGCAATCATT+CGG + chr7_3:2376293-2376312 None:intergenic 45.0%
!!! AGGGCCATCGGTTTTGTTAT+AGG - chr7_3:2376316-2376335 Msa1089040:three_prime_UTR 45.0%
!! TGTTTGTTTTTCTGGGCTCC+TGG - chr7_3:2376400-2376419 Msa1089040:intron 45.0%
!! GTTTGTTTTTCTGGGCTCCT+GGG - chr7_3:2376401-2376420 Msa1089040:intron 45.0%
GCATCTGTTTCCTGTAGTTC+TGG - chr7_3:2376432-2376451 Msa1089040:intron 45.0%
AAAACAGCAGCCAGAACTAC+AGG + chr7_3:2376445-2376464 None:intergenic 45.0%
CCAGCTGCCAAAAACTAAGT+GGG + chr7_3:2376527-2376546 None:intergenic 45.0%
ACCAGCTGCCAAAAACTAAG+TGG + chr7_3:2376528-2376547 None:intergenic 45.0%
ATAGAGCGGACGACTTACAA+AGG + chr7_3:2376593-2376612 None:intergenic 45.0%
! TATCTAAAGCCTTGGAGGCT+TGG - chr7_3:2376742-2376761 Msa1089040:three_prime_UTR 45.0%
CACATTGGGCTCGTTTGTTT+GGG - chr7_3:2376767-2376786 Msa1089040:three_prime_UTR 45.0%
GAAACCAACGAGAGAGAGAA+AGG + chr7_3:2377160-2377179 None:intergenic 45.0%
GATGGTCGCATAAATCGAAC+AGG - chr7_3:2377316-2377335 Msa1089040:intron 45.0%
!! AGGATCTGGAGTGTTGTCAT+TGG - chr7_3:2377499-2377518 Msa1089040:three_prime_UTR 45.0%
!! TGGAGTGTTGTCATTGGCAT+TGG - chr7_3:2377505-2377524 Msa1089040:three_prime_UTR 45.0%
GCTCATTCACGCTGGATTAA+AGG - chr7_3:2377533-2377552 Msa1089040:three_prime_UTR 45.0%
AGTTGTTGCTCCATTAGGCA+TGG - chr7_3:2377784-2377803 Msa1089040:intron 45.0%
AGATGTCGAGCCACGATATT+CGG - chr7_3:2378385-2378404 Msa1089040:intron 45.0%
!! GAACAGAAGTGCTTGGATAG+AGG - chr7_3:2378473-2378492 Msa1089040:intron 45.0%
GATGTGCATGGTCAGGTAAT+TGG - chr7_3:2378698-2378717 Msa1089040:intron 45.0%
GACCATTTATGTGGAGGGAT+TGG - chr7_3:2379045-2379064 Msa1089040:intron 45.0%
CCATTTATGTGGAGGGATTG+GGG - chr7_3:2379047-2379066 Msa1089040:intron 45.0%
!!! GGGAGCTATTTTTTTAGGGG+AGG - chr7_3:2379067-2379086 Msa1089040:intron 45.0%
TGAGCTTAGCTCACTTGGTA+AGG - chr7_3:2379168-2379187 Msa1089040:three_prime_UTR 45.0%
GAGCTTAGCTCACTTGGTAA+GGG - chr7_3:2379169-2379188 Msa1089040:three_prime_UTR 45.0%
TGCATAATTTATGCAGGGGC+CGG - chr7_3:2379196-2379215 Msa1089040:three_prime_UTR 45.0%
AAGGTGAATATGTGGGGTGT+CGG + chr7_3:2379232-2379251 None:intergenic 45.0%
GGTAAATTTCTCTAGCCGCT+AGG - chr7_3:2379255-2379274 Msa1089040:intron 45.0%
GTCAAGTATCCTAGTGTTGC+TGG - chr7_3:2379328-2379347 Msa1089040:intron 45.0%
GTATGAGTTCCAGCAACACT+AGG + chr7_3:2379340-2379359 None:intergenic 45.0%
GTATAATATATGCAGGGGCC+GGG + chr7_3:2379407-2379426 None:intergenic 45.0%
! GTGAGTCTAGCTCAGTTGAA+AGG + chr7_3:2379436-2379455 None:intergenic 45.0%
! TTTTTGCCTCATGTGTACGG+AGG - chr7_3:2379600-2379619 Msa1089040:intron 45.0%
AAGAGCTAGGGTTTACCAGA+TGG + chr7_3:2379878-2379897 None:intergenic 45.0%
AAGAGGTTGTTTGGTCACGA+GGG + chr7_3:2380122-2380141 None:intergenic 45.0%
! AAAGTTTTCGTCGTCCATGG+AGG - chr7_3:2380518-2380537 Msa1089040:intron 45.0%
CAACACTAAAAAGGCCTCCA+TGG + chr7_3:2380535-2380554 None:intergenic 45.0%
!! GGAGGCCTTTTTAGTGTTGA+TGG - chr7_3:2380536-2380555 Msa1089040:intron 45.0%
! TTTTGTGAGCCTCCTGATGA+AGG - chr7_3:2380593-2380612 Msa1089040:intron 45.0%
TGTGTCTTACCTTCATCAGG+AGG + chr7_3:2380605-2380624 None:intergenic 45.0%
!! GGTTGATGCATGACTTGCTA+TGG - chr7_3:2380715-2380734 Msa1089040:intron 45.0%
!!! TGGGTGCTTTTGTTTTGGTG+AGG - chr7_3:2380785-2380804 Msa1089040:intron 45.0%
!! AAACACCATATGGCGGATTG+TGG - chr7_3:2381401-2381420 Msa1089040:intron 45.0%
CGCCACCATCATTCACAAAT+TGG + chr7_3:2381461-2381480 None:intergenic 45.0%
!!! GCGTTTTATGGTGGATATGG+TGG - chr7_3:2381486-2381505 Msa1089040:intron 45.0%
! ATTGGCTTAACATCAGGGTG+TGG + chr7_3:2381724-2381743 None:intergenic 45.0%
ACACCCTGATGTTAAGCCAA+TGG - chr7_3:2381723-2381742 Msa1089040:intron 45.0%
TCAATCATTGGCAGCTCTTC+TGG + chr7_3:2381812-2381831 None:intergenic 45.0%
!! TAAAATAAAAATATATGATT+TGG - chr7_3:2376972-2376991 Msa1089040:intron 5.0%
!!! AAATTTATTTTTACTAAAAA+TGG - chr7_3:2379533-2379552 Msa1089040:intron 5.0%
!!! ATATTATTTTTGATATATTA+TGG - chr7_3:2380155-2380174 Msa1089040:intron 5.0%
!! ATTATAATAAAAAATGAAAA+AGG - chr7_3:2381345-2381364 Msa1089040:intron 5.0%
CAACACAATTCCTCTGCCCT+TGG - chr7_3:2375312-2375331 Msa1089040:three_prime_UTR 50.0%
! CTGCGAGTTGAGACAGAGTT+TGG + chr7_3:2375359-2375378 None:intergenic 50.0%
!! CTCAACTCGCAGTTTTGTGC+AGG - chr7_3:2375367-2375386 Msa1089040:three_prime_UTR 50.0%
!! ACCCTTAAGGATTGGTCGAG+AGG - chr7_3:2375922-2375941 Msa1089040:intron 50.0%
AGCTAGTGACCTCGCAATGA+AGG + chr7_3:2375974-2375993 None:intergenic 50.0%
! GCGAGGTCACTAGCTTGATA+TGG - chr7_3:2375979-2375998 Msa1089040:intron 50.0%
TTGGGATTGTTGGGGTATGG+AGG - chr7_3:2376061-2376080 Msa1089040:three_prime_UTR 50.0%
TGGGATTGTTGGGGTATGGA+GGG - chr7_3:2376062-2376081 Msa1089040:three_prime_UTR 50.0%
ATTGTTGGGGTATGGAGGGA+AGG - chr7_3:2376066-2376085 Msa1089040:three_prime_UTR 50.0%
TTGGCATACTACTGTGTGGG+TGG - chr7_3:2376121-2376140 Msa1089040:intron 50.0%
AACGGCGAAGGCAATCATTC+GGG + chr7_3:2376292-2376311 None:intergenic 50.0%
GAATGATTGCCTTCGCCGTT+AGG - chr7_3:2376292-2376311 Msa1089040:three_prime_UTR 50.0%
ATTGCCTTCGCCGTTAGGAA+GGG - chr7_3:2376297-2376316 Msa1089040:three_prime_UTR 50.0%
AAACCGATGGCCCTTCCTAA+CGG + chr7_3:2376310-2376329 None:intergenic 50.0%
!!! CCCACTTAGTTTTTGGCAGC+TGG - chr7_3:2376524-2376543 Msa1089040:three_prime_UTR 50.0%
!! TTGGAGGCTTGGTGCACATT+GGG - chr7_3:2376753-2376772 Msa1089040:three_prime_UTR 50.0%
GCACATTGGGCTCGTTTGTT+TGG - chr7_3:2376766-2376785 Msa1089040:three_prime_UTR 50.0%
TGCTCCTTTCTCTCTCTCGT+TGG - chr7_3:2377153-2377172 Msa1089040:intron 50.0%
TGTGGGTGCACACATAGTGA+TGG - chr7_3:2377469-2377488 Msa1089040:three_prime_UTR 50.0%
TGGCTATTGCTCATTCACGC+TGG - chr7_3:2377525-2377544 Msa1089040:three_prime_UTR 50.0%
TTGTTCGCGGAATGCGTAGA+TGG + chr7_3:2377966-2377985 None:intergenic 50.0%
CAGCTGCTTGCAACCTTGTT+TGG - chr7_3:2378229-2378248 Msa1089040:intron 50.0%
GATGTCGAGCCACGATATTC+GGG - chr7_3:2378386-2378405 Msa1089040:intron 50.0%
ACTGTTTGTGGCGATGTGCA+TGG - chr7_3:2378686-2378705 Msa1089040:intron 50.0%
CCCCAATCCCTCCACATAAA+TGG + chr7_3:2379050-2379069 None:intergenic 50.0%
GCATAATTTATGCAGGGGCC+GGG - chr7_3:2379197-2379216 Msa1089040:three_prime_UTR 50.0%
CATAATTTATGCAGGGGCCG+GGG - chr7_3:2379198-2379217 Msa1089040:three_prime_UTR 50.0%
! AGGTGAATATGTGGGGTGTC+GGG + chr7_3:2379231-2379250 None:intergenic 50.0%
AGTGTCCGGAATTCGAACTC+CGG - chr7_3:2379381-2379400 Msa1089040:intron 50.0%
GAGCTAGACTCACGAAGACA+AGG - chr7_3:2379443-2379462 Msa1089040:intron 50.0%
AGAGGTTGTTTGGTCACGAG+GGG + chr7_3:2380121-2380140 None:intergenic 50.0%
GAAGAGGTTGTTTGGTCACG+AGG + chr7_3:2380123-2380142 None:intergenic 50.0%
AGTGATCCACAATCTCTCCC+TGG - chr7_3:2380738-2380757 Msa1089040:intron 50.0%
!! GGCGATGGGTGCTTTTGTTT+TGG - chr7_3:2380780-2380799 Msa1089040:intron 50.0%
TCAATTGCAGTGGCAGACGA+GGG + chr7_3:2381540-2381559 None:intergenic 50.0%
ATCAATTGCAGTGGCAGACG+AGG + chr7_3:2381541-2381560 None:intergenic 50.0%
!! TTGCGTTCCGGGTTTGCTGT+TGG - chr7_3:2375199-2375218 Msa1089040:three_prime_UTR 55.0%
GGGCAGAGGAATTGTGTTGC+CGG + chr7_3:2375311-2375330 None:intergenic 55.0%
ATGCGACCAAGCAAGGCCAA+GGG + chr7_3:2375331-2375350 None:intergenic 55.0%
GGTGTAGATGCGACCAAGCA+AGG + chr7_3:2375338-2375357 None:intergenic 55.0%
GGTTTAGGTAGCTGCGATGC+AGG + chr7_3:2375464-2375483 None:intergenic 55.0%
GATTGCCTTCGCCGTTAGGA+AGG - chr7_3:2376296-2376315 Msa1089040:three_prime_UTR 55.0%
AACAGATGCTACCAGCACCC+AGG + chr7_3:2376421-2376440 None:intergenic 55.0%
CAATGTGCACCAAGCCTCCA+AGG + chr7_3:2376754-2376773 None:intergenic 55.0%
!! CTTGGAGGCTTGGTGCACAT+TGG - chr7_3:2376752-2376771 Msa1089040:three_prime_UTR 55.0%
TGCTGGAGTTGGGCTGTTCT+AGG + chr7_3:2378185-2378204 None:intergenic 55.0%
TTGTGGCGATGTGCATGGTC+AGG - chr7_3:2378691-2378710 Msa1089040:intron 55.0%
CGCTGTGAGCTTAGCTCACT+TGG - chr7_3:2379163-2379182 Msa1089040:three_prime_UTR 55.0%
!! GGTGAATATGTGGGGTGTCG+GGG + chr7_3:2379230-2379249 None:intergenic 55.0%
ATGCGGTGAAGTCGAGTGTC+CGG - chr7_3:2379367-2379386 Msa1089040:intron 55.0%
CCTCTTCCAGGGAGAGATTG+TGG + chr7_3:2380747-2380766 None:intergenic 55.0%
CCACAATCTCTCCCTGGAAG+AGG - chr7_3:2380744-2380763 Msa1089040:intron 55.0%
GCTTGCTTGGTCCTCTTCCA+GGG + chr7_3:2380758-2380777 None:intergenic 55.0%
!! CACCATATGGCGGATTGTGG+TGG - chr7_3:2381404-2381423 Msa1089040:intron 55.0%
TGCCACCACAATCCGCCATA+TGG + chr7_3:2381409-2381428 None:intergenic 55.0%
!! GGTGGCGCCAAAGCGTTTTA+TGG - chr7_3:2381474-2381493 Msa1089040:intron 55.0%
!! GGCGCCAAAGCGTTTTATGG+TGG - chr7_3:2381477-2381496 Msa1089040:intron 55.0%
GATGCGACCAAGCAAGGCCA+AGG + chr7_3:2375332-2375351 None:intergenic 60.0%
ATGGCCCTTCCTAACGGCGA+AGG + chr7_3:2376304-2376323 None:intergenic 60.0%
TCGCCGTTAGGAAGGGCCAT+CGG - chr7_3:2376304-2376323 Msa1089040:three_prime_UTR 60.0%
GGAGGTGGATGCTGTCAAGC+TGG - chr7_3:2376342-2376361 Msa1089040:three_prime_UTR 60.0%
! TTTTCTGGGCTCCTGGGTGC+TGG - chr7_3:2376407-2376426 Msa1089040:intron 60.0%
AATATATGCAGGGGCCGGGC+CGG + chr7_3:2379403-2379422 None:intergenic 60.0%
CGCTTGCTTGGTCCTCTTCC+AGG + chr7_3:2380759-2380778 None:intergenic 60.0%
GGAAGAGGACCAAGCAAGCG+TGG - chr7_3:2380759-2380778 Msa1089040:intron 60.0%
GACCAAGCAAGCGTGGCGAT+GGG - chr7_3:2380766-2380785 Msa1089040:intron 60.0%
CCAAGCAAGGCCAAGGGCAG+AGG + chr7_3:2375325-2375344 None:intergenic 65.0%
!! CCTCTGCCCTTGGCCTTGCT+TGG - chr7_3:2375322-2375341 Msa1089040:three_prime_UTR 65.0%
CCGGGCCGGAGTTCGAATTC+CGG + chr7_3:2379389-2379408 None:intergenic 65.0%
CCGGAATTCGAACTCCGGCC+CGG - chr7_3:2379386-2379405 Msa1089040:intron 65.0%
GGACCAAGCAAGCGTGGCGA+TGG - chr7_3:2380765-2380784 Msa1089040:intron 65.0%
CACCCATCGCCACGCTTGCT+TGG + chr7_3:2380771-2380790 None:intergenic 65.0%
!! GGGTGTCGGGGTTCGAACCC+CGG + chr7_3:2379218-2379237 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 2375126 2382163 2375126 ID=Msa1089040;Name=Msa1089040
chr7_3 mRNA 2375126 2382163 2375126 ID=Msa1089040-mRNA-1;Parent=Msa1089040;Name=Msa1089040-mRNA-1;_AED=0.23;_eAED=0.23;_QI=120|1|1|1|0.72|0.66|12|1722|101
chr7_3 exon 2375126 2375568 2375126 ID=Msa1089040-mRNA-1:exon:963;Parent=Msa1089040-mRNA-1
chr7_3 exon 2376029 2376103 2376029 ID=Msa1089040-mRNA-1:exon:962;Parent=Msa1089040-mRNA-1
chr7_3 exon 2376273 2376373 2376273 ID=Msa1089040-mRNA-1:exon:961;Parent=Msa1089040-mRNA-1
chr7_3 exon 2376446 2376574 2376446 ID=Msa1089040-mRNA-1:exon:960;Parent=Msa1089040-mRNA-1
chr7_3 exon 2376675 2376923 2376675 ID=Msa1089040-mRNA-1:exon:959;Parent=Msa1089040-mRNA-1
chr7_3 exon 2377408 2377555 2377408 ID=Msa1089040-mRNA-1:exon:958;Parent=Msa1089040-mRNA-1
chr7_3 exon 2378577 2378694 2378577 ID=Msa1089040-mRNA-1:exon:957;Parent=Msa1089040-mRNA-1
chr7_3 exon 2378794 2378902 2378794 ID=Msa1089040-mRNA-1:exon:956;Parent=Msa1089040-mRNA-1
chr7_3 exon 2379082 2379231 2379082 ID=Msa1089040-mRNA-1:exon:955;Parent=Msa1089040-mRNA-1
chr7_3 exon 2379735 2380044 2379735 ID=Msa1089040-mRNA-1:exon:954;Parent=Msa1089040-mRNA-1
chr7_3 exon 2381795 2382054 2381795 ID=Msa1089040-mRNA-1:exon:953;Parent=Msa1089040-mRNA-1
chr7_3 exon 2382108 2382163 2382108 ID=Msa1089040-mRNA-1:exon:952;Parent=Msa1089040-mRNA-1
chr7_3 five_prime_UTR 2382108 2382163 2382108 ID=Msa1089040-mRNA-1:five_prime_utr;Parent=Msa1089040-mRNA-1
chr7_3 five_prime_UTR 2381991 2382054 2381991 ID=Msa1089040-mRNA-1:five_prime_utr;Parent=Msa1089040-mRNA-1
chr7_3 CDS 2381795 2381990 2381795 ID=Msa1089040-mRNA-1:cds;Parent=Msa1089040-mRNA-1
chr7_3 CDS 2379935 2380044 2379935 ID=Msa1089040-mRNA-1:cds;Parent=Msa1089040-mRNA-1
chr7_3 three_prime_UTR 2379735 2379934 2379735 ID=Msa1089040-mRNA-1:three_prime_utr;Parent=Msa1089040-mRNA-1
chr7_3 three_prime_UTR 2379082 2379231 2379082 ID=Msa1089040-mRNA-1:three_prime_utr;Parent=Msa1089040-mRNA-1
chr7_3 three_prime_UTR 2378794 2378902 2378794 ID=Msa1089040-mRNA-1:three_prime_utr;Parent=Msa1089040-mRNA-1
chr7_3 three_prime_UTR 2378577 2378694 2378577 ID=Msa1089040-mRNA-1:three_prime_utr;Parent=Msa1089040-mRNA-1
chr7_3 three_prime_UTR 2377408 2377555 2377408 ID=Msa1089040-mRNA-1:three_prime_utr;Parent=Msa1089040-mRNA-1
chr7_3 three_prime_UTR 2376675 2376923 2376675 ID=Msa1089040-mRNA-1:three_prime_utr;Parent=Msa1089040-mRNA-1
chr7_3 three_prime_UTR 2376446 2376574 2376446 ID=Msa1089040-mRNA-1:three_prime_utr;Parent=Msa1089040-mRNA-1
chr7_3 three_prime_UTR 2376273 2376373 2376273 ID=Msa1089040-mRNA-1:three_prime_utr;Parent=Msa1089040-mRNA-1
chr7_3 three_prime_UTR 2376029 2376103 2376029 ID=Msa1089040-mRNA-1:three_prime_utr;Parent=Msa1089040-mRNA-1
chr7_3 three_prime_UTR 2375126 2375568 2375126 ID=Msa1089040-mRNA-1:three_prime_utr;Parent=Msa1089040-mRNA-1
Gene Sequence

>Msa1089040

ATGTCTTCTCCGGCAACACAATTCCTCTGCCCTTGGCCTTGCTTGGTCGCATCTACACCAAACTCTGTCTCAACTCGCAGTTTTGTGCAGGCCACCGTTGCATCACAATCAAAGGTTTCCAAGATGTTTGCTCAAGCCTTGTTGTTTAACTCGTGCAATATTCCTGCATCGCAGCTACCTAAACCTTGTTTCAAAGTTTTCAAAGAAAGAGAGAGACTATTGACACTGCAGTGTAGATTCTCAATAGATGATGCGAAATATGATGATGATGGTCGCATAAATCGAACAGGTTTGTGTCTTGTGTGA
Protein sequence

>Msa1089040

MSSPATQFLCPWPCLVASTPNSVSTRSFVQATVASQSKVSKMFAQALLFNSCNIPASQLPKPCFKVFKERERLLTLQCRFSIDDAKYDDDGRINRTGLCLV*