Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0759410 | XP_004500230.1 | 55.556 | 72 | 7 | 1 | 57 | 103 | 128 | 199 | 9.33e-14 | 77.4 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0759410 | A0A1S2Y6M5 | 55.556 | 72 | 7 | 1 | 57 | 103 | 128 | 199 | 4.45e-14 | 77.4 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006110 | Msa0759410 | 0.805673 | 1.191708e-49 | -8.615850e-47 |
Msa0011170 | Msa0759410 | 0.827350 | 1.641883e-54 | -8.615850e-47 |
Msa0014710 | Msa0759410 | 0.846642 | 1.911092e-59 | -8.615850e-47 |
Msa0017510 | Msa0759410 | 0.835189 | 1.939081e-56 | -8.615850e-47 |
Msa0020930 | Msa0759410 | 0.805590 | 1.240476e-49 | -8.615850e-47 |
Msa0028640 | Msa0759410 | 0.806171 | 9.363101e-50 | -8.615850e-47 |
Msa0031340 | Msa0759410 | 0.803139 | 4.020099e-49 | -8.615850e-47 |
Msa0054480 | Msa0759410 | 0.800147 | 1.651525e-48 | -8.615850e-47 |
Msa0055740 | Msa0759410 | 0.806003 | 1.015600e-49 | -8.615850e-47 |
Msa0073530 | Msa0759410 | 0.815161 | 1.065543e-51 | -8.615850e-47 |
Msa0075880 | Msa0759410 | 0.805217 | 1.484756e-49 | -8.615850e-47 |
Msa0075900 | Msa0759410 | 0.849825 | 2.521544e-60 | -8.615850e-47 |
Msa0079400 | Msa0759410 | 0.800888 | 1.166880e-48 | -8.615850e-47 |
Msa0090100 | Msa0759410 | 0.809655 | 1.699616e-50 | -8.615850e-47 |
Msa0091210 | Msa0759410 | -0.801703 | 7.946077e-49 | -8.615850e-47 |
Msa0095560 | Msa0759410 | 0.809288 | 2.037428e-50 | -8.615850e-47 |
Msa0105070 | Msa0759410 | 0.810286 | 1.243193e-50 | -8.615850e-47 |
Msa0112750 | Msa0759410 | 0.840800 | 6.989496e-58 | -8.615850e-47 |
Msa0114060 | Msa0759410 | 0.820719 | 5.910725e-53 | -8.615850e-47 |
Msa0116770 | Msa0759410 | 0.811786 | 5.881637e-51 | -8.615850e-47 |
Msa0117710 | Msa0759410 | 0.802523 | 5.387607e-49 | -8.615850e-47 |
Msa0117770 | Msa0759410 | 0.811502 | 6.779472e-51 | -8.615850e-47 |
Msa0604510 | Msa0759410 | 0.805936 | 1.049231e-49 | -8.615850e-47 |
Msa0608620 | Msa0759410 | 0.819420 | 1.172613e-52 | -8.615850e-47 |
Msa0611800 | Msa0759410 | 0.833838 | 4.237368e-56 | -8.615850e-47 |
Msa0620960 | Msa0759410 | 0.812883 | 3.387638e-51 | -8.615850e-47 |
Msa0626090 | Msa0759410 | 0.808373 | 3.198019e-50 | -8.615850e-47 |
Msa0627450 | Msa0759410 | 0.801365 | 9.319702e-49 | -8.615850e-47 |
Msa0657610 | Msa0759410 | 0.828123 | 1.070886e-54 | -8.615850e-47 |
Msa0657970 | Msa0759410 | 0.847452 | 1.145960e-59 | -8.615850e-47 |
Msa0658570 | Msa0759410 | 0.803130 | 4.038083e-49 | -8.615850e-47 |
Msa0661870 | Msa0759410 | 0.825520 | 4.481772e-54 | -8.615850e-47 |
Msa0663240 | Msa0759410 | 0.810314 | 1.226166e-50 | -8.615850e-47 |
Msa0663380 | Msa0759410 | 0.804646 | 1.955156e-49 | -8.615850e-47 |
Msa0669440 | Msa0759410 | 0.802474 | 5.516178e-49 | -8.615850e-47 |
Msa0672570 | Msa0759410 | 0.804184 | 2.440009e-49 | -8.615850e-47 |
Msa0672690 | Msa0759410 | 0.800528 | 1.381940e-48 | -8.615850e-47 |
Msa0673460 | Msa0759410 | 0.808849 | 2.530333e-50 | -8.615850e-47 |
Msa0682550 | Msa0759410 | 0.820909 | 5.346369e-53 | -8.615850e-47 |
Msa0682630 | Msa0759410 | 0.808387 | 3.175437e-50 | -8.615850e-47 |
Msa0688270 | Msa0759410 | 0.811995 | 5.296398e-51 | -8.615850e-47 |
Msa0688480 | Msa0759410 | 0.802937 | 4.426167e-49 | -8.615850e-47 |
Msa0693380 | Msa0759410 | 0.833305 | 5.754639e-56 | -8.615850e-47 |
Msa0697060 | Msa0759410 | 0.839908 | 1.195502e-57 | -8.615850e-47 |
Msa0715470 | Msa0759410 | 0.806242 | 9.047003e-50 | -8.615850e-47 |
Msa0723990 | Msa0759410 | 0.805350 | 1.392612e-49 | -8.615850e-47 |
Msa0724210 | Msa0759410 | 0.835480 | 1.637543e-56 | -8.615850e-47 |
Msa0731940 | Msa0759410 | 0.816331 | 5.844886e-52 | -8.615850e-47 |
Msa0745790 | Msa0759410 | 0.812783 | 3.562684e-51 | -8.615850e-47 |
Msa0759410 | Msa0760130 | 0.823157 | 1.610946e-53 | -8.615850e-47 |
Msa0759410 | Msa0762360 | 0.811228 | 7.777292e-51 | -8.615850e-47 |
Msa0759410 | Msa0764570 | 0.811119 | 8.208957e-51 | -8.615850e-47 |
Msa0759410 | Msa0764960 | 0.804378 | 2.223494e-49 | -8.615850e-47 |
Msa0759410 | Msa0766630 | 0.847625 | 1.027553e-59 | -8.615850e-47 |
Msa0759410 | Msa0777230 | 0.810886 | 9.222574e-51 | -8.615850e-47 |
Msa0759410 | Msa0777790 | 0.812724 | 3.670560e-51 | -8.615850e-47 |
Msa0759410 | Msa0777850 | 0.832611 | 8.564373e-56 | -8.615850e-47 |
Msa0759410 | Msa0786340 | 0.804600 | 1.998409e-49 | -8.615850e-47 |
Msa0759410 | Msa0787470 | 0.803686 | 3.096332e-49 | -8.615850e-47 |
Msa0759410 | Msa0789250 | 0.813505 | 2.474178e-51 | -8.615850e-47 |
Msa0759410 | Msa0790510 | 0.817678 | 2.911041e-52 | -8.615850e-47 |
Msa0759410 | Msa0801760 | 0.801256 | 9.811643e-49 | -8.615850e-47 |
Msa0759410 | Msa0806090 | 0.802056 | 6.723052e-49 | -8.615850e-47 |
Msa0759410 | Msa0806660 | 0.815051 | 1.127022e-51 | -8.615850e-47 |
Msa0759410 | Msa0811080 | 0.810463 | 1.138222e-50 | -8.615850e-47 |
Msa0759410 | Msa0813400 | 0.803122 | 4.053735e-49 | -8.615850e-47 |
Msa0759410 | Msa0816710 | 0.812593 | 3.921711e-51 | -8.615850e-47 |
Msa0759410 | Msa0820850 | 0.811915 | 5.513901e-51 | -8.615850e-47 |
Msa0759410 | Msa0822870 | 0.808162 | 3.546800e-50 | -8.615850e-47 |
Msa0759410 | Msa0824660 | 0.806884 | 6.623332e-50 | -8.615850e-47 |
Msa0759410 | Msa0832340 | 0.802148 | 6.438080e-49 | -8.615850e-47 |
Msa0759410 | Msa0844490 | 0.803262 | 3.791484e-49 | -8.615850e-47 |
Msa0759410 | Msa0861130 | 0.814119 | 1.812131e-51 | -8.615850e-47 |
Msa0759410 | Msa0867890 | 0.812310 | 4.522279e-51 | -8.615850e-47 |
Msa0759410 | Msa0880140 | 0.832263 | 1.044324e-55 | -8.615850e-47 |
Msa0759410 | Msa0885280 | 0.813845 | 2.082611e-51 | -8.615850e-47 |
Msa0759410 | Msa0893950 | 0.803425 | 3.507825e-49 | -8.615850e-47 |
Msa0759410 | Msa0896750 | 0.810102 | 1.362204e-50 | -8.615850e-47 |
Msa0759410 | Msa0897880 | 0.817469 | 3.245515e-52 | -8.615850e-47 |
Msa0759410 | Msa0907070 | 0.830777 | 2.425480e-55 | -8.615850e-47 |
Msa0759410 | Msa0909120 | 0.843504 | 1.345329e-58 | -8.615850e-47 |
Msa0759410 | Msa0909140 | 0.809491 | 1.842980e-50 | -8.615850e-47 |
Msa0759410 | Msa0922410 | 0.814921 | 1.204224e-51 | -8.615850e-47 |
Msa0759410 | Msa0922720 | 0.806103 | 9.676871e-50 | -8.615850e-47 |
Msa0759410 | Msa0931520 | 0.804955 | 1.684528e-49 | -8.615850e-47 |
Msa0759410 | Msa0938220 | 0.808103 | 3.650404e-50 | -8.615850e-47 |
Msa0759410 | Msa0954920 | 0.822020 | 2.961076e-53 | -8.615850e-47 |
Msa0759410 | Msa0958170 | 0.800450 | 1.432841e-48 | -8.615850e-47 |
Msa0759410 | Msa0959360 | 0.801026 | 1.093258e-48 | -8.615850e-47 |
Msa0759410 | Msa0965750 | 0.800258 | 1.567751e-48 | -8.615850e-47 |
Msa0759410 | Msa0969450 | 0.855350 | 6.692603e-62 | -8.615850e-47 |
Msa0759410 | Msa0969520 | 0.827753 | 1.314420e-54 | -8.615850e-47 |
Msa0759410 | Msa0975220 | 0.812625 | 3.859480e-51 | -8.615850e-47 |
Msa0759410 | Msa0993290 | 0.804673 | 1.929353e-49 | -8.615850e-47 |
Msa0759410 | Msa0993600 | 0.804071 | 2.575862e-49 | -8.615850e-47 |
Msa0759410 | Msa0998690 | 0.802171 | 6.365891e-49 | -8.615850e-47 |
Msa0759410 | Msa1004840 | 0.806099 | 9.698350e-50 | -8.615850e-47 |
Msa0759410 | Msa1014540 | 0.866266 | 3.232569e-65 | -8.615850e-47 |
Msa0759410 | Msa1024240 | 0.801766 | 7.713870e-49 | -8.615850e-47 |
Msa0759410 | Msa1030970 | 0.816534 | 5.262569e-52 | -8.615850e-47 |
Msa0759410 | Msa1035310 | 0.808120 | 3.620270e-50 | -8.615850e-47 |
Msa0759410 | Msa1052830 | 0.800947 | 1.134565e-48 | -8.615850e-47 |
Msa0759410 | Msa1059570 | 0.818539 | 1.859390e-52 | -8.615850e-47 |
Msa0759410 | Msa1075220 | -0.822761 | 1.992899e-53 | -8.615850e-47 |
Msa0759410 | Msa1075540 | 0.817542 | 3.124080e-52 | -8.615850e-47 |
Msa0759410 | Msa1075650 | 0.815431 | 9.278541e-52 | -8.615850e-47 |
Msa0759410 | Msa1079180 | 0.825533 | 4.450792e-54 | -8.615850e-47 |
Msa0759410 | Msa1081590 | 0.814539 | 1.463403e-51 | -8.615850e-47 |
Msa0759410 | Msa1082500 | 0.867219 | 1.607561e-65 | -8.615850e-47 |
Msa0759410 | Msa1084260 | 0.801953 | 7.059901e-49 | -8.615850e-47 |
Msa0759410 | Msa1085200 | 0.803112 | 4.071691e-49 | -8.615850e-47 |
Msa0759410 | Msa1090320 | 0.800505 | 1.396776e-48 | -8.615850e-47 |
Msa0759410 | Msa1098400 | 0.804922 | 1.711614e-49 | -8.615850e-47 |
Msa0759410 | Msa1098420 | 0.805924 | 1.055290e-49 | -8.615850e-47 |
Msa0759410 | Msa1114030 | 0.807955 | 3.924839e-50 | -8.615850e-47 |
Msa0759410 | Msa1121490 | 0.810477 | 1.130316e-50 | -8.615850e-47 |
Msa0759410 | Msa1124540 | -0.801432 | 9.027955e-49 | -8.615850e-47 |
Msa0759410 | Msa1131220 | 0.809316 | 2.010022e-50 | -8.615850e-47 |
Msa0759410 | Msa1158310 | 0.810892 | 9.195193e-51 | -8.615850e-47 |
Msa0759410 | Msa1160670 | 0.820420 | 6.923345e-53 | -8.615850e-47 |
Msa0759410 | Msa1161580 | 0.803158 | 3.984760e-49 | -8.615850e-47 |
Msa0759410 | Msa1162550 | -0.823588 | 1.277663e-53 | -8.615850e-47 |
Msa0759410 | Msa1167220 | 0.804251 | 2.362520e-49 | -8.615850e-47 |
Msa0759410 | Msa1170730 | 0.808483 | 3.029768e-50 | -8.615850e-47 |
Msa0759410 | Msa1172670 | 0.835154 | 1.979150e-56 | -8.615850e-47 |
Msa0759410 | Msa1186060 | 0.803422 | 3.513227e-49 | -8.615850e-47 |
Msa0759410 | Msa1195920 | 0.804211 | 2.408446e-49 | -8.615850e-47 |
Msa0759410 | Msa1205130 | 0.801727 | 7.856745e-49 | -8.615850e-47 |
Msa0759410 | Msa1226660 | 0.801714 | 7.902092e-49 | -8.615850e-47 |
Msa0759410 | Msa1233890 | 0.833858 | 4.189338e-56 | -8.615850e-47 |
Msa0759410 | Msa1238470 | 0.804200 | 2.421479e-49 | -8.615850e-47 |
Msa0759410 | Msa1239720 | 0.813079 | 3.068949e-51 | -8.615850e-47 |
Msa0759410 | Msa1242220 | 0.802095 | 6.599633e-49 | -8.615850e-47 |
Msa0759410 | Msa1249490 | 0.820424 | 6.908167e-53 | -8.615850e-47 |
Msa0759410 | Msa1253000 | 0.810965 | 8.867742e-51 | -8.615850e-47 |
Msa0759410 | Msa1273920 | 0.800727 | 1.258174e-48 | -8.615850e-47 |
Msa0759410 | Msa1277660 | 0.822308 | 2.539010e-53 | -8.615850e-47 |
Msa0759410 | Msa1279210 | 0.800147 | 1.651525e-48 | -8.615850e-47 |
Msa0759410 | Msa1281510 | 0.800124 | 1.669836e-48 | -8.615850e-47 |
Msa0759410 | Msa1282580 | -0.801087 | 1.062356e-48 | -8.615850e-47 |
Msa0759410 | Msa1283860 | 0.815486 | 9.018482e-52 | -8.615850e-47 |
Msa0759410 | Msa1284680 | 0.825928 | 3.586506e-54 | -8.615850e-47 |
Msa0759410 | Msa1289280 | 0.812090 | 5.049411e-51 | -8.615850e-47 |
Msa0759410 | Msa1291660 | 0.832754 | 7.890849e-56 | -8.615850e-47 |
Msa0759410 | Msa1297290 | 0.803950 | 2.729162e-49 | -8.615850e-47 |
Msa0759410 | Msa1298260 | 0.813274 | 2.780439e-51 | -8.615850e-47 |
Msa0759410 | Msa1299070 | 0.806480 | 8.058964e-50 | -8.615850e-47 |
Msa0759410 | Msa1305340 | 0.807761 | 4.316808e-50 | -8.615850e-47 |
Msa0759410 | Msa1306850 | 0.813154 | 2.954413e-51 | -8.615850e-47 |
Msa0759410 | Msa1313150 | 0.818174 | 2.249647e-52 | -8.615850e-47 |
Msa0759410 | Msa1314170 | 0.809953 | 1.466318e-50 | -8.615850e-47 |
Msa0759410 | Msa1314340 | 0.821642 | 3.622096e-53 | -8.615850e-47 |
Msa0759410 | Msa1318990 | 0.800196 | 1.614670e-48 | -8.615850e-47 |
Msa0759410 | Msa1322890 | 0.803261 | 3.793770e-49 | -8.615850e-47 |
Msa0759410 | Msa1324500 | 0.812971 | 3.240153e-51 | -8.615850e-47 |
Msa0759410 | Msa1324780 | 0.812972 | 3.239081e-51 | -8.615850e-47 |
Msa0759410 | Msa1329700 | 0.809331 | 1.994645e-50 | -8.615850e-47 |
Msa0759410 | Msa1331000 | 0.803968 | 2.706527e-49 | -8.615850e-47 |
Msa0759410 | Msa1353470 | 0.815770 | 7.797547e-52 | -8.615850e-47 |
Msa0759410 | Msa1359040 | 0.836456 | 9.257968e-57 | -8.615850e-47 |
Msa0759410 | Msa1372760 | 0.819691 | 1.016609e-52 | -8.615850e-47 |
Msa0759410 | Msa1372980 | 0.818500 | 1.898023e-52 | -8.615850e-47 |
Msa0759410 | Msa1373010 | 0.837179 | 6.054280e-57 | -8.615850e-47 |
Msa0759410 | Msa1373030 | 0.841709 | 4.030801e-58 | -8.615850e-47 |
Msa0759410 | Msa1385000 | 0.803350 | 3.634598e-49 | -8.615850e-47 |
Msa0759410 | Msa1390050 | 0.807816 | 4.202671e-50 | -8.615850e-47 |
Msa0759410 | Msa1392260 | 0.831212 | 1.896915e-55 | -8.615850e-47 |
Msa0759410 | Msa1397860 | 0.835741 | 1.406402e-56 | -8.615850e-47 |
Msa0759410 | Msa1411020 | 0.817799 | 2.734429e-52 | -8.615850e-47 |
Msa0759410 | Msa1420490 | 0.812536 | 4.036379e-51 | -8.615850e-47 |
Msa0759410 | Msa1423390 | 0.812578 | 3.950268e-51 | -8.615850e-47 |
Msa0759410 | Msa1423880 | 0.826721 | 2.321728e-54 | -8.615850e-47 |
Msa0759410 | Msa1424290 | 0.814695 | 1.351758e-51 | -8.615850e-47 |
Msa0759410 | Msa1424680 | 0.809714 | 1.650635e-50 | -8.615850e-47 |
Msa0759410 | Msa1427230 | 0.800686 | 1.282712e-48 | -8.615850e-47 |
Msa0759410 | Msa1429900 | 0.820971 | 5.173200e-53 | -8.615850e-47 |
Msa0759410 | Msa1434350 | 0.815502 | 8.947329e-52 | -8.615850e-47 |
Msa0759410 | Msa1435650 | 0.804319 | 2.287270e-49 | -8.615850e-47 |
Msa0759410 | Msa1438250 | 0.820097 | 8.211466e-53 | -8.615850e-47 |
Msa0759410 | Msa1439320 | 0.817063 | 4.005561e-52 | -8.615850e-47 |
Msa0759410 | Msa1440370 | 0.811505 | 6.770557e-51 | -8.615850e-47 |
Msa0759410 | Msa1440810 | 0.810395 | 1.177415e-50 | -8.615850e-47 |
Msa0759410 | Msa1451620 | -0.811225 | 7.786777e-51 | -8.615850e-47 |
Msa0759410 | Msa1452240 | 0.805205 | 1.493952e-49 | -8.615850e-47 |
Msa0759410 | Msa1460050 | 0.807117 | 5.911259e-50 | -8.615850e-47 |
Msa0759410 | Msa1463670 | 0.821058 | 4.941045e-53 | -8.615850e-47 |
Msa0759410 | Msa1466540 | 0.848285 | 6.754545e-60 | -8.615850e-47 |
Msa0131770 | Msa0759410 | 0.800120 | 1.672780e-48 | -8.615850e-47 |
Msa0140390 | Msa0759410 | 0.807588 | 4.696665e-50 | -8.615850e-47 |
Msa0141620 | Msa0759410 | 0.800110 | 1.680630e-48 | -8.615850e-47 |
Msa0142220 | Msa0759410 | 0.819094 | 1.390801e-52 | -8.615850e-47 |
Msa0150270 | Msa0759410 | 0.827152 | 1.831369e-54 | -8.615850e-47 |
Msa0157290 | Msa0759410 | 0.833724 | 4.525719e-56 | -8.615850e-47 |
Msa0159930 | Msa0759410 | 0.816263 | 6.051686e-52 | -8.615850e-47 |
Msa0165210 | Msa0759410 | 0.812307 | 4.528951e-51 | -8.615850e-47 |
Msa0165550 | Msa0759410 | 0.803935 | 2.749575e-49 | -8.615850e-47 |
Msa0169860 | Msa0759410 | 0.805785 | 1.128814e-49 | -8.615850e-47 |
Msa0173990 | Msa0759410 | 0.815981 | 6.997690e-52 | -8.615850e-47 |
Msa0188830 | Msa0759410 | 0.827219 | 1.765034e-54 | -8.615850e-47 |
Msa0191250 | Msa0759410 | 0.807404 | 5.139609e-50 | -8.615850e-47 |
Msa0199240 | Msa0759410 | 0.813960 | 1.964099e-51 | -8.615850e-47 |
Msa0200260 | Msa0759410 | 0.816393 | 5.660191e-52 | -8.615850e-47 |
Msa0201070 | Msa0759410 | 0.817914 | 2.575576e-52 | -8.615850e-47 |
Msa0202950 | Msa0759410 | 0.805312 | 1.418508e-49 | -8.615850e-47 |
Msa0210450 | Msa0759410 | 0.803433 | 3.494228e-49 | -8.615850e-47 |
Msa0212990 | Msa0759410 | 0.805357 | 1.388122e-49 | -8.615850e-47 |
Msa0213520 | Msa0759410 | 0.804079 | 2.566132e-49 | -8.615850e-47 |
Msa0214300 | Msa0759410 | 0.809188 | 2.141126e-50 | -8.615850e-47 |
Msa0215320 | Msa0759410 | -0.802152 | 6.423198e-49 | -8.615850e-47 |
Msa0218240 | Msa0759410 | 0.812016 | 5.240421e-51 | -8.615850e-47 |
Msa0220580 | Msa0759410 | 0.800395 | 1.470577e-48 | -8.615850e-47 |
Msa0220740 | Msa0759410 | 0.830454 | 2.909911e-55 | -8.615850e-47 |
Msa0221060 | Msa0759410 | 0.814579 | 1.434101e-51 | -8.615850e-47 |
Msa0223410 | Msa0759410 | -0.820410 | 6.960445e-53 | -8.615850e-47 |
Msa0233300 | Msa0759410 | 0.812705 | 3.706245e-51 | -8.615850e-47 |
Msa0366970 | Msa0759410 | 0.836542 | 8.803975e-57 | -8.615850e-47 |
Msa0373930 | Msa0759410 | 0.806192 | 9.267721e-50 | -8.615850e-47 |
Msa0376590 | Msa0759410 | 0.803907 | 2.786228e-49 | -8.615850e-47 |
Msa0379640 | Msa0759410 | 0.802964 | 4.370140e-49 | -8.615850e-47 |
Msa0388960 | Msa0759410 | 0.831920 | 1.269427e-55 | -8.615850e-47 |
Msa0390400 | Msa0759410 | -0.805469 | 1.314796e-49 | -8.615850e-47 |
Msa0395790 | Msa0759410 | 0.802689 | 4.979932e-49 | -8.615850e-47 |
Msa0397750 | Msa0759410 | 0.825454 | 4.645754e-54 | -8.615850e-47 |
Msa0399300 | Msa0759410 | 0.819418 | 1.173950e-52 | -8.615850e-47 |
Msa0402290 | Msa0759410 | 0.845924 | 2.998409e-59 | -8.615850e-47 |
Msa0406880 | Msa0759410 | 0.800595 | 1.338550e-48 | -8.615850e-47 |
Msa0417100 | Msa0759410 | 0.820580 | 6.364704e-53 | -8.615850e-47 |
Msa0419980 | Msa0759410 | 0.808098 | 3.658822e-50 | -8.615850e-47 |
Msa0426360 | Msa0759410 | 0.809679 | 1.679260e-50 | -8.615850e-47 |
Msa0426400 | Msa0759410 | 0.807764 | 4.310125e-50 | -8.615850e-47 |
Msa0428930 | Msa0759410 | 0.802325 | 5.918972e-49 | -8.615850e-47 |
Msa0431060 | Msa0759410 | 0.800617 | 1.324969e-48 | -8.615850e-47 |
Msa0432300 | Msa0759410 | 0.831606 | 1.517750e-55 | -8.615850e-47 |
Msa0437990 | Msa0759410 | 0.831627 | 1.499387e-55 | -8.615850e-47 |
Msa0440750 | Msa0759410 | 0.808985 | 2.365639e-50 | -8.615850e-47 |
Msa0443260 | Msa0759410 | 0.818493 | 1.904394e-52 | -8.615850e-47 |
Msa0458090 | Msa0759410 | 0.815787 | 7.728486e-52 | -8.615850e-47 |
Msa0466390 | Msa0759410 | 0.815318 | 9.828461e-52 | -8.615850e-47 |
Msa0469940 | Msa0759410 | -0.812885 | 3.384816e-51 | -8.615850e-47 |
Msa0479660 | Msa0759410 | 0.802946 | 4.406853e-49 | -8.615850e-47 |
Msa0243100 | Msa0759410 | 0.818472 | 1.925462e-52 | -8.615850e-47 |
Msa0258760 | Msa0759410 | 0.804390 | 2.210052e-49 | -8.615850e-47 |
Msa0262520 | Msa0759410 | 0.804162 | 2.465587e-49 | -8.615850e-47 |
Msa0270100 | Msa0759410 | 0.809648 | 1.705254e-50 | -8.615850e-47 |
Msa0284420 | Msa0759410 | 0.804959 | 1.681397e-49 | -8.615850e-47 |
Msa0284520 | Msa0759410 | 0.804653 | 1.948350e-49 | -8.615850e-47 |
Msa0285450 | Msa0759410 | 0.812084 | 5.063789e-51 | -8.615850e-47 |
Msa0287650 | Msa0759410 | 0.805898 | 1.068919e-49 | -8.615850e-47 |
Msa0288100 | Msa0759410 | 0.846494 | 2.096524e-59 | -8.615850e-47 |
Msa0292930 | Msa0759410 | 0.804814 | 1.803524e-49 | -8.615850e-47 |
Msa0294030 | Msa0759410 | 0.804125 | 2.509550e-49 | -8.615850e-47 |
Msa0297960 | Msa0759410 | 0.800870 | 1.176565e-48 | -8.615850e-47 |
Msa0306210 | Msa0759410 | -0.817862 | 2.646451e-52 | -8.615850e-47 |
Msa0323080 | Msa0759410 | 0.803061 | 4.171963e-49 | -8.615850e-47 |
Msa0326520 | Msa0759410 | 0.811631 | 6.355145e-51 | -8.615850e-47 |
Msa0330340 | Msa0759410 | 0.808580 | 2.888045e-50 | -8.615850e-47 |
Msa0331000 | Msa0759410 | 0.802232 | 6.184582e-49 | -8.615850e-47 |
Msa0338110 | Msa0759410 | 0.825891 | 3.661271e-54 | -8.615850e-47 |
Msa0340450 | Msa0759410 | 0.823758 | 1.165960e-53 | -8.615850e-47 |
Msa0344690 | Msa0759410 | -0.806405 | 8.358515e-50 | -8.615850e-47 |
Msa0344980 | Msa0759410 | 0.800766 | 1.235573e-48 | -8.615850e-47 |
Msa0345970 | Msa0759410 | 0.803606 | 3.217073e-49 | -8.615850e-47 |
Msa0350990 | Msa0759410 | 0.812827 | 3.484339e-51 | -8.615850e-47 |
Msa0351030 | Msa0759410 | 0.816194 | 6.269876e-52 | -8.615850e-47 |
Msa0351100 | Msa0759410 | 0.815875 | 7.388742e-52 | -8.615850e-47 |
Msa0355220 | Msa0759410 | 0.838752 | 2.386348e-57 | -8.615850e-47 |
Msa0483150 | Msa0759410 | 0.800045 | 1.732298e-48 | -8.615850e-47 |
Msa0484780 | Msa0759410 | 0.855822 | 4.873302e-62 | -8.615850e-47 |
Msa0488560 | Msa0759410 | 0.801704 | 7.941627e-49 | -8.615850e-47 |
Msa0502890 | Msa0759410 | 0.845988 | 2.880268e-59 | -8.615850e-47 |
Msa0507680 | Msa0759410 | 0.804522 | 2.075072e-49 | -8.615850e-47 |
Msa0512890 | Msa0759410 | 0.812809 | 3.517628e-51 | -8.615850e-47 |
Msa0512900 | Msa0759410 | 0.827859 | 1.239505e-54 | -8.615850e-47 |
Msa0516370 | Msa0759410 | 0.805495 | 1.298651e-49 | -8.615850e-47 |
Msa0520700 | Msa0759410 | 0.805041 | 1.616818e-49 | -8.615850e-47 |
Msa0523460 | Msa0759410 | 0.813332 | 2.701144e-51 | -8.615850e-47 |
Msa0532350 | Msa0759410 | 0.839186 | 1.842342e-57 | -8.615850e-47 |
Msa0536220 | Msa0759410 | 0.807441 | 5.048126e-50 | -8.615850e-47 |
Msa0553460 | Msa0759410 | 0.807643 | 4.572477e-50 | -8.615850e-47 |
Msa0555020 | Msa0759410 | 0.827040 | 1.948145e-54 | -8.615850e-47 |
Msa0558690 | Msa0759410 | 0.809762 | 1.611595e-50 | -8.615850e-47 |
Msa0585230 | Msa0759410 | 0.804917 | 1.716298e-49 | -8.615850e-47 |
Msa0593650 | Msa0759410 | 0.806338 | 8.633223e-50 | -8.615850e-47 |
Msa0601750 | Msa0759410 | 0.825150 | 5.482411e-54 | -8.615850e-47 |
Msa0602240 | Msa0759410 | 0.806678 | 7.319112e-50 | -8.615850e-47 |
Msa0602250 | Msa0759410 | 0.806080 | 9.785431e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0759410 | MtrunA17_Chr3g0104071 | 54.167 | 72 | 8 | 1 | 57 | 103 | 117 | 188 | 3.71e-17 | 75.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 37 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTACATTCTGTTATATTT+TGG | 0.175954 | 5_2:+15074343 | Msa0759410:three_prime_UTR |
ACACGGCCAGGGTTTGGTTT+TGG | 0.303489 | 5_2:+15074418 | Msa0759410:three_prime_UTR |
CCTTTCTTCCTTTCCTGATC+AGG | 0.333627 | 5_2:-15073507 | None:intergenic |
GTGAGTTCTTCTGTTTATAA+TGG | 0.342042 | 5_2:+15073441 | Msa0759410:CDS |
ACTGCAAAGAGAGGCTCTTT+TGG | 0.360910 | 5_2:+15073477 | Msa0759410:CDS |
GGAATTACACGGCCAGGGTT+TGG | 0.400392 | 5_2:+15074412 | Msa0759410:three_prime_UTR |
GTGTGACCTGATGCATGTTT+TGG | 0.403704 | 5_2:+15074301 | Msa0759410:exon |
AAAATATAACAGAATGTAAG+AGG | 0.414706 | 5_2:-15074341 | None:intergenic |
GATGGACTCATGGAGAATTA+AGG | 0.420061 | 5_2:+15072983 | Msa0759410:CDS |
AGTAAATGTCTTGAAGGTTA+AGG | 0.448911 | 5_2:+15074451 | Msa0759410:three_prime_UTR |
AATTCTCCATGAGTCCATCT+TGG | 0.454517 | 5_2:-15072979 | None:intergenic |
TCCATACCTATGTTTCTCTT+CGG | 0.456234 | 5_2:-15073541 | None:intergenic |
CTATGTTTCTCTTCGGTCCA+TGG | 0.458251 | 5_2:-15073534 | None:intergenic |
AAAATTGAATTTGAAGGCGG+TGG | 0.501288 | 5_2:+15073933 | Msa0759410:CDS |
TTAAATGGAATTACACGGCC+AGG | 0.504542 | 5_2:+15074406 | Msa0759410:three_prime_UTR |
ACCATTCCAAGATGGACTCA+TGG | 0.532023 | 5_2:+15072973 | Msa0759410:CDS |
TCCATGAGTCCATCTTGGAA+TGG | 0.533845 | 5_2:-15072974 | None:intergenic |
CCTGTACCAAAACATGCATC+AGG | 0.538125 | 5_2:-15074307 | None:intergenic |
CCTGATCAGGAAAGGAAGAA+AGG | 0.540469 | 5_2:+15073507 | Msa0759410:CDS |
ACAAACAAACAAAACCATAC+AGG | 0.542095 | 5_2:-15072832 | None:intergenic |
TAGTAAATGCAAAAGAGATA+AGG | 0.549691 | 5_2:-15074373 | None:intergenic |
TGTAGTAATTATGACGAGGT+TGG | 0.550032 | 5_2:+15074276 | Msa0759410:intron |
AGAGGAATTACTGCAAAGAG+AGG | 0.554018 | 5_2:+15073468 | Msa0759410:CDS |
ACAACAACAGCATGCAGCGA+TGG | 0.560559 | 5_2:-15072942 | None:intergenic |
TCATGGCTAGATACTTGTGT+TGG | 0.563631 | 5_2:-15073895 | None:intergenic |
ATGCAGCGATGGGACGATGA+AGG | 0.564044 | 5_2:-15072931 | None:intergenic |
AACAGAATGTAAGAGGGAGC+TGG | 0.571495 | 5_2:-15074334 | None:intergenic |
TAAATGGAATTACACGGCCA+GGG | 0.581515 | 5_2:+15074407 | Msa0759410:three_prime_UTR |
AAAATTTAACCCCACCAGGA+TGG | 0.592048 | 5_2:-15072801 | None:intergenic |
ATCGCTGCATGCTGTTGTTG+TGG | 0.596388 | 5_2:+15072944 | Msa0759410:CDS |
GTAGATCTCCTGATCAGGAA+AGG | 0.602196 | 5_2:+15073499 | Msa0759410:CDS |
AAAGGAAGAAAGGTGTGCCA+TGG | 0.605391 | 5_2:+15073517 | Msa0759410:CDS |
CAACAACAGCATGCAGCGAT+GGG | 0.607855 | 5_2:-15072941 | None:intergenic |
CATGGACCGAAGAGAAACAT+AGG | 0.612819 | 5_2:+15073535 | Msa0759410:CDS |
GGTAGTAAACCATTCCAAGA+TGG | 0.618983 | 5_2:+15072965 | Msa0759410:CDS |
AAATATAACAGAATGTAAGA+GGG | 0.650335 | 5_2:-15074340 | None:intergenic |
TTCTTGTAGTAATTATGACG+AGG | 0.655018 | 5_2:+15074272 | Msa0759410:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATTTATTTAAGTTGTTGA+GGG | + | chr5_2:15073750-15073769 | Msa0759410:intron | 15.0% |
!! | AAGTAAAAAATTGAATTTGA+AGG | + | chr5_2:15073927-15073946 | Msa0759410:CDS | 15.0% |
!!! | GGAATTTAAATTTTTAAGAT+AGG | - | chr5_2:15073998-15074017 | None:intergenic | 15.0% |
!!! | TTGTTATTGATTGATATATA+CGG | - | chr5_2:15074220-15074239 | None:intergenic | 15.0% |
!!! | ATATTTATTTAAGTTGTTGA+GGG | + | chr5_2:15073750-15073769 | Msa0759410:intron | 15.0% |
!! | AAGTAAAAAATTGAATTTGA+AGG | + | chr5_2:15073927-15073946 | Msa0759410:CDS | 15.0% |
!!! | GGAATTTAAATTTTTAAGAT+AGG | - | chr5_2:15073998-15074017 | None:intergenic | 15.0% |
!!! | TTGTTATTGATTGATATATA+CGG | - | chr5_2:15074220-15074239 | None:intergenic | 15.0% |
!! | AAAAACAGCAGTAAAAAAAT+AGG | - | chr5_2:15073049-15073068 | None:intergenic | 20.0% |
!! | GAAATTTATGAGAATTGATA+TGG | - | chr5_2:15073133-15073152 | None:intergenic | 20.0% |
!! | TGATGAATCATATAAGAAAT+TGG | + | chr5_2:15073335-15073354 | Msa0759410:intron | 20.0% |
!! | TTTACCCTTTACTTTATATT+AGG | + | chr5_2:15073419-15073438 | Msa0759410:intron | 20.0% |
!!! | GATATTTATTTAAGTTGTTG+AGG | + | chr5_2:15073749-15073768 | Msa0759410:intron | 20.0% |
!!! | TATTTATTTAAGTTGTTGAG+GGG | + | chr5_2:15073751-15073770 | Msa0759410:intron | 20.0% |
!!! | ATTGACATGTTATTTCTATT+GGG | + | chr5_2:15073808-15073827 | Msa0759410:intron | 20.0% |
!! | TAAAAAATTGAATTTGAAGG+CGG | + | chr5_2:15073930-15073949 | Msa0759410:CDS | 20.0% |
!!! | ACAACTTTACTATTTTTGTA+TGG | + | chr5_2:15074034-15074053 | Msa0759410:intron | 20.0% |
!! | AAATATAACAGAATGTAAGA+GGG | - | chr5_2:15074343-15074362 | None:intergenic | 20.0% |
!! | AAAATATAACAGAATGTAAG+AGG | - | chr5_2:15074344-15074363 | None:intergenic | 20.0% |
!!! | TCTTACATTCTGTTATATTT+TGG | + | chr5_2:15074343-15074362 | Msa0759410:three_prime_UTR | 20.0% |
!!! | TACTAAGTTGATCTTTTAAA+TGG | + | chr5_2:15074391-15074410 | Msa0759410:three_prime_UTR | 20.0% |
!!! | ATCTTTTAAATGGAATTACA+CGG | + | chr5_2:15074401-15074420 | Msa0759410:three_prime_UTR | 20.0% |
!! | AAAAATAGTAAATGTCTTGA+AGG | + | chr5_2:15074445-15074464 | Msa0759410:three_prime_UTR | 20.0% |
!! | AAAAACAGCAGTAAAAAAAT+AGG | - | chr5_2:15073049-15073068 | None:intergenic | 20.0% |
!! | GAAATTTATGAGAATTGATA+TGG | - | chr5_2:15073133-15073152 | None:intergenic | 20.0% |
!! | TGATGAATCATATAAGAAAT+TGG | + | chr5_2:15073335-15073354 | Msa0759410:intron | 20.0% |
!! | TTTACCCTTTACTTTATATT+AGG | + | chr5_2:15073419-15073438 | Msa0759410:intron | 20.0% |
!!! | GATATTTATTTAAGTTGTTG+AGG | + | chr5_2:15073749-15073768 | Msa0759410:intron | 20.0% |
!!! | TATTTATTTAAGTTGTTGAG+GGG | + | chr5_2:15073751-15073770 | Msa0759410:intron | 20.0% |
!!! | ATTGACATGTTATTTCTATT+GGG | + | chr5_2:15073808-15073827 | Msa0759410:intron | 20.0% |
!! | TAAAAAATTGAATTTGAAGG+CGG | + | chr5_2:15073930-15073949 | Msa0759410:CDS | 20.0% |
!!! | ACAACTTTACTATTTTTGTA+TGG | + | chr5_2:15074034-15074053 | Msa0759410:intron | 20.0% |
!! | AAATATAACAGAATGTAAGA+GGG | - | chr5_2:15074343-15074362 | None:intergenic | 20.0% |
!! | AAAATATAACAGAATGTAAG+AGG | - | chr5_2:15074344-15074363 | None:intergenic | 20.0% |
!!! | TCTTACATTCTGTTATATTT+TGG | + | chr5_2:15074343-15074362 | Msa0759410:three_prime_UTR | 20.0% |
!!! | TACTAAGTTGATCTTTTAAA+TGG | + | chr5_2:15074391-15074410 | Msa0759410:three_prime_UTR | 20.0% |
!!! | ATCTTTTAAATGGAATTACA+CGG | + | chr5_2:15074401-15074420 | Msa0759410:three_prime_UTR | 20.0% |
!! | AAAAATAGTAAATGTCTTGA+AGG | + | chr5_2:15074445-15074464 | Msa0759410:three_prime_UTR | 20.0% |
! | ATTTCTATCATCTCCATAAT+CGG | + | chr5_2:15073148-15073167 | Msa0759410:intron | 25.0% |
!! | AATGCATTTTATTCCGATTA+TGG | - | chr5_2:15073164-15073183 | None:intergenic | 25.0% |
! | AAATGCCTATGAGTAAAATT+TGG | + | chr5_2:15073198-15073217 | Msa0759410:intron | 25.0% |
!! | AAACACCAAATTTTACTCAT+AGG | - | chr5_2:15073206-15073225 | None:intergenic | 25.0% |
!! | TGTTTAGCATCATATGTTTT+TGG | + | chr5_2:15073221-15073240 | Msa0759410:intron | 25.0% |
!!! | GAAGTTGATGTTTGTAATAT+AGG | + | chr5_2:15073357-15073376 | Msa0759410:intron | 25.0% |
!!! | GCTGGTTTAGTTATAATTTT+TGG | + | chr5_2:15073381-15073400 | Msa0759410:intron | 25.0% |
! | CTCACCTAATATAAAGTAAA+GGG | - | chr5_2:15073426-15073445 | None:intergenic | 25.0% |
! | ACTCACCTAATATAAAGTAA+AGG | - | chr5_2:15073427-15073446 | None:intergenic | 25.0% |
!!! | TCTGTTTATAATGGTTTTAG+AGG | + | chr5_2:15073450-15073469 | Msa0759410:CDS | 25.0% |
!!! | TGGTCTTTTACATTTTGATA+TGG | + | chr5_2:15073681-15073700 | Msa0759410:intron | 25.0% |
!!! | CATTGACATGTTATTTCTAT+TGG | + | chr5_2:15073807-15073826 | Msa0759410:intron | 25.0% |
! | AATATACATGATAGCTTAGT+AGG | - | chr5_2:15074065-15074084 | None:intergenic | 25.0% |
!! | CATTGGTAATAGATGATAAA+TGG | - | chr5_2:15074089-15074108 | None:intergenic | 25.0% |
! | TCATCTTACTACAATATCAT+TGG | - | chr5_2:15074106-15074125 | None:intergenic | 25.0% |
! | ATATTGTAGTAAGATGAGTA+TGG | + | chr5_2:15074109-15074128 | Msa0759410:intron | 25.0% |
!! | TTGACTTAACTTCATTTTAG+TGG | + | chr5_2:15074176-15074195 | Msa0759410:intron | 25.0% |
!!! | TGACTTAACTTCATTTTAGT+GGG | + | chr5_2:15074177-15074196 | Msa0759410:intron | 25.0% |
! | TAGTAAATGCAAAAGAGATA+AGG | - | chr5_2:15074376-15074395 | None:intergenic | 25.0% |
! | ATTTCTATCATCTCCATAAT+CGG | + | chr5_2:15073148-15073167 | Msa0759410:intron | 25.0% |
!! | AATGCATTTTATTCCGATTA+TGG | - | chr5_2:15073164-15073183 | None:intergenic | 25.0% |
! | AAATGCCTATGAGTAAAATT+TGG | + | chr5_2:15073198-15073217 | Msa0759410:intron | 25.0% |
!! | AAACACCAAATTTTACTCAT+AGG | - | chr5_2:15073206-15073225 | None:intergenic | 25.0% |
!! | TGTTTAGCATCATATGTTTT+TGG | + | chr5_2:15073221-15073240 | Msa0759410:intron | 25.0% |
!!! | GAAGTTGATGTTTGTAATAT+AGG | + | chr5_2:15073357-15073376 | Msa0759410:intron | 25.0% |
!!! | GCTGGTTTAGTTATAATTTT+TGG | + | chr5_2:15073381-15073400 | Msa0759410:intron | 25.0% |
! | CTCACCTAATATAAAGTAAA+GGG | - | chr5_2:15073426-15073445 | None:intergenic | 25.0% |
! | ACTCACCTAATATAAAGTAA+AGG | - | chr5_2:15073427-15073446 | None:intergenic | 25.0% |
!!! | TCTGTTTATAATGGTTTTAG+AGG | + | chr5_2:15073450-15073469 | Msa0759410:CDS | 25.0% |
!!! | TGGTCTTTTACATTTTGATA+TGG | + | chr5_2:15073681-15073700 | Msa0759410:intron | 25.0% |
!!! | CATTGACATGTTATTTCTAT+TGG | + | chr5_2:15073807-15073826 | Msa0759410:intron | 25.0% |
! | AATATACATGATAGCTTAGT+AGG | - | chr5_2:15074065-15074084 | None:intergenic | 25.0% |
!! | CATTGGTAATAGATGATAAA+TGG | - | chr5_2:15074089-15074108 | None:intergenic | 25.0% |
! | TCATCTTACTACAATATCAT+TGG | - | chr5_2:15074106-15074125 | None:intergenic | 25.0% |
! | ATATTGTAGTAAGATGAGTA+TGG | + | chr5_2:15074109-15074128 | Msa0759410:intron | 25.0% |
!! | TTGACTTAACTTCATTTTAG+TGG | + | chr5_2:15074176-15074195 | Msa0759410:intron | 25.0% |
!!! | TGACTTAACTTCATTTTAGT+GGG | + | chr5_2:15074177-15074196 | Msa0759410:intron | 25.0% |
! | TAGTAAATGCAAAAGAGATA+AGG | - | chr5_2:15074376-15074395 | None:intergenic | 25.0% |
! | AATTTTTGAATCGTCCTGTA+TGG | + | chr5_2:15072818-15072837 | Msa0759410:exon | 30.0% |
ACAAACAAACAAAACCATAC+AGG | - | chr5_2:15072835-15072854 | None:intergenic | 30.0% | |
!!! | TGTATTGATTGCAGTTTTGT+CGG | + | chr5_2:15072852-15072871 | Msa0759410:CDS | 30.0% |
!!! | TTTTTTAGTTGTGTTCTTGC+TGG | + | chr5_2:15073064-15073083 | Msa0759410:intron | 30.0% |
TATGAGAATTGATATGGTTG+AGG | - | chr5_2:15073127-15073146 | None:intergenic | 30.0% | |
GTATCATTTCAGATGCTTTA+TGG | - | chr5_2:15073294-15073313 | None:intergenic | 30.0% | |
! | AAAGCATCTGAAATGATACA+TGG | + | chr5_2:15073295-15073314 | Msa0759410:intron | 30.0% |
GTGAGTTCTTCTGTTTATAA+TGG | + | chr5_2:15073441-15073460 | Msa0759410:CDS | 30.0% | |
ATACGTAGTTATTGAGAGTT+AGG | + | chr5_2:15073640-15073659 | Msa0759410:intron | 30.0% | |
ATTTCTATTGGGTCTGAAAA+AGG | + | chr5_2:15073819-15073838 | Msa0759410:intron | 30.0% | |
AAAAGGATGGAAAAGGTAAT+TGG | + | chr5_2:15073836-15073855 | Msa0759410:intron | 30.0% | |
TGATCACAAAATTCCTTGAA+AGG | - | chr5_2:15073867-15073886 | None:intergenic | 30.0% | |
! | CAAGGAATTTTGTGATCATT+AGG | + | chr5_2:15073869-15073888 | Msa0759410:intron | 30.0% |
!! | TTTTACTTGTTGAAGCTTCA+TGG | - | chr5_2:15073915-15073934 | None:intergenic | 30.0% |
! | AGTAAAGTTGTCTTCTAGAA+AGG | - | chr5_2:15074025-15074044 | None:intergenic | 30.0% |
TTCTTGTAGTAATTATGACG+AGG | + | chr5_2:15074272-15074291 | Msa0759410:intron | 30.0% | |
AGTAAATGTCTTGAAGGTTA+AGG | + | chr5_2:15074451-15074470 | Msa0759410:three_prime_UTR | 30.0% | |
! | AATTTTTGAATCGTCCTGTA+TGG | + | chr5_2:15072818-15072837 | Msa0759410:exon | 30.0% |
ACAAACAAACAAAACCATAC+AGG | - | chr5_2:15072835-15072854 | None:intergenic | 30.0% | |
!!! | TGTATTGATTGCAGTTTTGT+CGG | + | chr5_2:15072852-15072871 | Msa0759410:CDS | 30.0% |
!!! | TTTTTTAGTTGTGTTCTTGC+TGG | + | chr5_2:15073064-15073083 | Msa0759410:intron | 30.0% |
TATGAGAATTGATATGGTTG+AGG | - | chr5_2:15073127-15073146 | None:intergenic | 30.0% | |
GTATCATTTCAGATGCTTTA+TGG | - | chr5_2:15073294-15073313 | None:intergenic | 30.0% | |
! | AAAGCATCTGAAATGATACA+TGG | + | chr5_2:15073295-15073314 | Msa0759410:intron | 30.0% |
GTGAGTTCTTCTGTTTATAA+TGG | + | chr5_2:15073441-15073460 | Msa0759410:CDS | 30.0% | |
ATACGTAGTTATTGAGAGTT+AGG | + | chr5_2:15073640-15073659 | Msa0759410:intron | 30.0% | |
ATTTCTATTGGGTCTGAAAA+AGG | + | chr5_2:15073819-15073838 | Msa0759410:intron | 30.0% | |
AAAAGGATGGAAAAGGTAAT+TGG | + | chr5_2:15073836-15073855 | Msa0759410:intron | 30.0% | |
TGATCACAAAATTCCTTGAA+AGG | - | chr5_2:15073867-15073886 | None:intergenic | 30.0% | |
! | CAAGGAATTTTGTGATCATT+AGG | + | chr5_2:15073869-15073888 | Msa0759410:intron | 30.0% |
!! | TTTTACTTGTTGAAGCTTCA+TGG | - | chr5_2:15073915-15073934 | None:intergenic | 30.0% |
! | AGTAAAGTTGTCTTCTAGAA+AGG | - | chr5_2:15074025-15074044 | None:intergenic | 30.0% |
TTCTTGTAGTAATTATGACG+AGG | + | chr5_2:15074272-15074291 | Msa0759410:intron | 30.0% | |
AGTAAATGTCTTGAAGGTTA+AGG | + | chr5_2:15074451-15074470 | Msa0759410:three_prime_UTR | 30.0% | |
TTCAAAAATTTAACCCCACC+AGG | - | chr5_2:15072808-15072827 | None:intergenic | 35.0% | |
!!! | GTATTGATTGCAGTTTTGTC+GGG | + | chr5_2:15072853-15072872 | Msa0759410:CDS | 35.0% |
AAAGAATAAGGAATGGCGAA+TGG | - | chr5_2:15073099-15073118 | None:intergenic | 35.0% | |
ATTCGCCATTCCTTATTCTT+TGG | + | chr5_2:15073098-15073117 | Msa0759410:intron | 35.0% | |
ATCGGAATAAAATGCATTGC+AGG | + | chr5_2:15073166-15073185 | Msa0759410:intron | 35.0% | |
GATGTTTGTAATATAGGAGC+TGG | + | chr5_2:15073363-15073382 | Msa0759410:intron | 35.0% | |
TCCATACCTATGTTTCTCTT+CGG | - | chr5_2:15073544-15073563 | None:intergenic | 35.0% | |
GAGAGTTAGGTATTTCCTAA+TGG | + | chr5_2:15073653-15073672 | Msa0759410:intron | 35.0% | |
TAAAAGACCACAACACCATT+AGG | - | chr5_2:15073671-15073690 | None:intergenic | 35.0% | |
GTAATTGGAGAAACCTTTCA+AGG | + | chr5_2:15073851-15073870 | Msa0759410:intron | 35.0% | |
AAAATTGAATTTGAAGGCGG+TGG | + | chr5_2:15073933-15073952 | Msa0759410:CDS | 35.0% | |
GTGTTGTCCTTATGCTTAAA+AGG | + | chr5_2:15073967-15073986 | Msa0759410:intron | 35.0% | |
TTGTCCTTATGCTTAAAAGG+TGG | + | chr5_2:15073970-15073989 | Msa0759410:intron | 35.0% | |
! | GTTGTCTTCTAGAAAGGAAA+AGG | - | chr5_2:15074019-15074038 | None:intergenic | 35.0% |
AACTCAAAATCTCCAGTCTT+AGG | + | chr5_2:15074133-15074152 | Msa0759410:intron | 35.0% | |
TGTAGTAATTATGACGAGGT+TGG | + | chr5_2:15074276-15074295 | Msa0759410:intron | 35.0% | |
TTCAAAAATTTAACCCCACC+AGG | - | chr5_2:15072808-15072827 | None:intergenic | 35.0% | |
!!! | GTATTGATTGCAGTTTTGTC+GGG | + | chr5_2:15072853-15072872 | Msa0759410:CDS | 35.0% |
AAAGAATAAGGAATGGCGAA+TGG | - | chr5_2:15073099-15073118 | None:intergenic | 35.0% | |
ATTCGCCATTCCTTATTCTT+TGG | + | chr5_2:15073098-15073117 | Msa0759410:intron | 35.0% | |
ATCGGAATAAAATGCATTGC+AGG | + | chr5_2:15073166-15073185 | Msa0759410:intron | 35.0% | |
GATGTTTGTAATATAGGAGC+TGG | + | chr5_2:15073363-15073382 | Msa0759410:intron | 35.0% | |
TCCATACCTATGTTTCTCTT+CGG | - | chr5_2:15073544-15073563 | None:intergenic | 35.0% | |
GAGAGTTAGGTATTTCCTAA+TGG | + | chr5_2:15073653-15073672 | Msa0759410:intron | 35.0% | |
TAAAAGACCACAACACCATT+AGG | - | chr5_2:15073671-15073690 | None:intergenic | 35.0% | |
GTAATTGGAGAAACCTTTCA+AGG | + | chr5_2:15073851-15073870 | Msa0759410:intron | 35.0% | |
AAAATTGAATTTGAAGGCGG+TGG | + | chr5_2:15073933-15073952 | Msa0759410:CDS | 35.0% | |
GTGTTGTCCTTATGCTTAAA+AGG | + | chr5_2:15073967-15073986 | Msa0759410:intron | 35.0% | |
TTGTCCTTATGCTTAAAAGG+TGG | + | chr5_2:15073970-15073989 | Msa0759410:intron | 35.0% | |
! | GTTGTCTTCTAGAAAGGAAA+AGG | - | chr5_2:15074019-15074038 | None:intergenic | 35.0% |
AACTCAAAATCTCCAGTCTT+AGG | + | chr5_2:15074133-15074152 | Msa0759410:intron | 35.0% | |
TGTAGTAATTATGACGAGGT+TGG | + | chr5_2:15074276-15074295 | Msa0759410:intron | 35.0% | |
AAAATTTAACCCCACCAGGA+TGG | - | chr5_2:15072804-15072823 | None:intergenic | 40.0% | |
GGTAGTAAACCATTCCAAGA+TGG | + | chr5_2:15072965-15072984 | Msa0759410:CDS | 40.0% | |
AATTCTCCATGAGTCCATCT+TGG | - | chr5_2:15072982-15073001 | None:intergenic | 40.0% | |
! | GATGGACTCATGGAGAATTA+AGG | + | chr5_2:15072983-15073002 | Msa0759410:CDS | 40.0% |
ACTCATGGAGAATTAAGGTC+AGG | + | chr5_2:15072988-15073007 | Msa0759410:intron | 40.0% | |
GGCTTCCAAAGAATAAGGAA+TGG | - | chr5_2:15073106-15073125 | None:intergenic | 40.0% | |
GTTGAGGCTTCCAAAGAATA+AGG | - | chr5_2:15073111-15073130 | None:intergenic | 40.0% | |
AGAGGAATTACTGCAAAGAG+AGG | + | chr5_2:15073468-15073487 | Msa0759410:CDS | 40.0% | |
! | TTTTGGTAGATCTCCTGATC+AGG | + | chr5_2:15073494-15073513 | Msa0759410:CDS | 40.0% |
ACCGAAGAGAAACATAGGTA+TGG | + | chr5_2:15073540-15073559 | Msa0759410:intron | 40.0% | |
! | GGTATTTCCTAATGGTGTTG+TGG | + | chr5_2:15073661-15073680 | Msa0759410:intron | 40.0% |
CTATTGGGTCTGAAAAAGGA+TGG | + | chr5_2:15073823-15073842 | Msa0759410:intron | 40.0% | |
GGTCTGAAAAAGGATGGAAA+AGG | + | chr5_2:15073829-15073848 | Msa0759410:intron | 40.0% | |
TCATGGCTAGATACTTGTGT+TGG | - | chr5_2:15073898-15073917 | None:intergenic | 40.0% | |
GCATAAGGACAACACTTACA+TGG | - | chr5_2:15073962-15073981 | None:intergenic | 40.0% | |
! | GGAACCACCTTTTAAGCATA+AGG | - | chr5_2:15073977-15073996 | None:intergenic | 40.0% |
TCAAAATCTCCAGTCTTAGG+AGG | + | chr5_2:15074136-15074155 | Msa0759410:intron | 40.0% | |
CAAAATCTCCAGTCTTAGGA+GGG | + | chr5_2:15074137-15074156 | Msa0759410:intron | 40.0% | |
! | TATTTTGTCCCTCCTAAGAC+TGG | - | chr5_2:15074148-15074167 | None:intergenic | 40.0% |
TTAAATGGAATTACACGGCC+AGG | + | chr5_2:15074406-15074425 | Msa0759410:three_prime_UTR | 40.0% | |
TAAATGGAATTACACGGCCA+GGG | + | chr5_2:15074407-15074426 | Msa0759410:three_prime_UTR | 40.0% | |
! | TTTTGTCCAAAACCAAACCC+TGG | - | chr5_2:15074427-15074446 | None:intergenic | 40.0% |
! | TGCCATGTTTTTCCAGTACT+GGG | - | chr5_2:15074504-15074523 | None:intergenic | 40.0% |
! | TTGCCATGTTTTTCCAGTAC+TGG | - | chr5_2:15074505-15074524 | None:intergenic | 40.0% |
AAAATTTAACCCCACCAGGA+TGG | - | chr5_2:15072804-15072823 | None:intergenic | 40.0% | |
GGTAGTAAACCATTCCAAGA+TGG | + | chr5_2:15072965-15072984 | Msa0759410:CDS | 40.0% | |
AATTCTCCATGAGTCCATCT+TGG | - | chr5_2:15072982-15073001 | None:intergenic | 40.0% | |
! | GATGGACTCATGGAGAATTA+AGG | + | chr5_2:15072983-15073002 | Msa0759410:CDS | 40.0% |
ACTCATGGAGAATTAAGGTC+AGG | + | chr5_2:15072988-15073007 | Msa0759410:intron | 40.0% | |
GGCTTCCAAAGAATAAGGAA+TGG | - | chr5_2:15073106-15073125 | None:intergenic | 40.0% | |
GTTGAGGCTTCCAAAGAATA+AGG | - | chr5_2:15073111-15073130 | None:intergenic | 40.0% | |
AGAGGAATTACTGCAAAGAG+AGG | + | chr5_2:15073468-15073487 | Msa0759410:CDS | 40.0% | |
! | TTTTGGTAGATCTCCTGATC+AGG | + | chr5_2:15073494-15073513 | Msa0759410:CDS | 40.0% |
ACCGAAGAGAAACATAGGTA+TGG | + | chr5_2:15073540-15073559 | Msa0759410:intron | 40.0% | |
! | GGTATTTCCTAATGGTGTTG+TGG | + | chr5_2:15073661-15073680 | Msa0759410:intron | 40.0% |
CTATTGGGTCTGAAAAAGGA+TGG | + | chr5_2:15073823-15073842 | Msa0759410:intron | 40.0% | |
GGTCTGAAAAAGGATGGAAA+AGG | + | chr5_2:15073829-15073848 | Msa0759410:intron | 40.0% | |
TCATGGCTAGATACTTGTGT+TGG | - | chr5_2:15073898-15073917 | None:intergenic | 40.0% | |
GCATAAGGACAACACTTACA+TGG | - | chr5_2:15073962-15073981 | None:intergenic | 40.0% | |
! | GGAACCACCTTTTAAGCATA+AGG | - | chr5_2:15073977-15073996 | None:intergenic | 40.0% |
TCAAAATCTCCAGTCTTAGG+AGG | + | chr5_2:15074136-15074155 | Msa0759410:intron | 40.0% | |
CAAAATCTCCAGTCTTAGGA+GGG | + | chr5_2:15074137-15074156 | Msa0759410:intron | 40.0% | |
! | TATTTTGTCCCTCCTAAGAC+TGG | - | chr5_2:15074148-15074167 | None:intergenic | 40.0% |
TTAAATGGAATTACACGGCC+AGG | + | chr5_2:15074406-15074425 | Msa0759410:three_prime_UTR | 40.0% | |
TAAATGGAATTACACGGCCA+GGG | + | chr5_2:15074407-15074426 | Msa0759410:three_prime_UTR | 40.0% | |
! | TTTTGTCCAAAACCAAACCC+TGG | - | chr5_2:15074427-15074446 | None:intergenic | 40.0% |
! | TGCCATGTTTTTCCAGTACT+GGG | - | chr5_2:15074504-15074523 | None:intergenic | 40.0% |
! | TTGCCATGTTTTTCCAGTAC+TGG | - | chr5_2:15074505-15074524 | None:intergenic | 40.0% |
!! | TTCGTTTTTGCCATCCTGGT+GGG | + | chr5_2:15072791-15072810 | Msa0759410:five_prime_UTR | 45.0% |
! | ACCATTCCAAGATGGACTCA+TGG | + | chr5_2:15072973-15072992 | Msa0759410:CDS | 45.0% |
TCCATGAGTCCATCTTGGAA+TGG | - | chr5_2:15072977-15072996 | None:intergenic | 45.0% | |
! | ACTGCAAAGAGAGGCTCTTT+TGG | + | chr5_2:15073477-15073496 | Msa0759410:CDS | 45.0% |
GTAGATCTCCTGATCAGGAA+AGG | + | chr5_2:15073499-15073518 | Msa0759410:CDS | 45.0% | |
CCTTTCTTCCTTTCCTGATC+AGG | - | chr5_2:15073510-15073529 | None:intergenic | 45.0% | |
CCTGATCAGGAAAGGAAGAA+AGG | + | chr5_2:15073507-15073526 | Msa0759410:CDS | 45.0% | |
! | AAAGGAAGAAAGGTGTGCCA+TGG | + | chr5_2:15073517-15073536 | Msa0759410:CDS | 45.0% |
CTATGTTTCTCTTCGGTCCA+TGG | - | chr5_2:15073537-15073556 | None:intergenic | 45.0% | |
CATGGACCGAAGAGAAACAT+AGG | + | chr5_2:15073535-15073554 | Msa0759410:CDS | 45.0% | |
! | GTGTGACCTGATGCATGTTT+TGG | + | chr5_2:15074301-15074320 | Msa0759410:exon | 45.0% |
CCTGTACCAAAACATGCATC+AGG | - | chr5_2:15074310-15074329 | None:intergenic | 45.0% | |
!!! | CCTGATGCATGTTTTGGTAC+AGG | + | chr5_2:15074307-15074326 | Msa0759410:exon | 45.0% |
AACAGAATGTAAGAGGGAGC+TGG | - | chr5_2:15074337-15074356 | None:intergenic | 45.0% | |
! | TTTTCCATCACTCCCAGTAC+TGG | + | chr5_2:15074489-15074508 | Msa0759410:three_prime_UTR | 45.0% |
!! | TTTTCCAGTACTGGGAGTGA+TGG | - | chr5_2:15074496-15074515 | None:intergenic | 45.0% |
! | CTCCCAGTACTGGAAAAACA+TGG | + | chr5_2:15074499-15074518 | Msa0759410:three_prime_UTR | 45.0% |
!! | TTCGTTTTTGCCATCCTGGT+GGG | + | chr5_2:15072791-15072810 | Msa0759410:five_prime_UTR | 45.0% |
! | ACCATTCCAAGATGGACTCA+TGG | + | chr5_2:15072973-15072992 | Msa0759410:CDS | 45.0% |
TCCATGAGTCCATCTTGGAA+TGG | - | chr5_2:15072977-15072996 | None:intergenic | 45.0% | |
! | ACTGCAAAGAGAGGCTCTTT+TGG | + | chr5_2:15073477-15073496 | Msa0759410:CDS | 45.0% |
GTAGATCTCCTGATCAGGAA+AGG | + | chr5_2:15073499-15073518 | Msa0759410:CDS | 45.0% | |
CCTTTCTTCCTTTCCTGATC+AGG | - | chr5_2:15073510-15073529 | None:intergenic | 45.0% | |
CCTGATCAGGAAAGGAAGAA+AGG | + | chr5_2:15073507-15073526 | Msa0759410:CDS | 45.0% | |
! | AAAGGAAGAAAGGTGTGCCA+TGG | + | chr5_2:15073517-15073536 | Msa0759410:CDS | 45.0% |
CTATGTTTCTCTTCGGTCCA+TGG | - | chr5_2:15073537-15073556 | None:intergenic | 45.0% | |
CATGGACCGAAGAGAAACAT+AGG | + | chr5_2:15073535-15073554 | Msa0759410:CDS | 45.0% | |
! | GTGTGACCTGATGCATGTTT+TGG | + | chr5_2:15074301-15074320 | Msa0759410:exon | 45.0% |
CCTGTACCAAAACATGCATC+AGG | - | chr5_2:15074310-15074329 | None:intergenic | 45.0% | |
!!! | CCTGATGCATGTTTTGGTAC+AGG | + | chr5_2:15074307-15074326 | Msa0759410:exon | 45.0% |
AACAGAATGTAAGAGGGAGC+TGG | - | chr5_2:15074337-15074356 | None:intergenic | 45.0% | |
! | TTTTCCATCACTCCCAGTAC+TGG | + | chr5_2:15074489-15074508 | Msa0759410:three_prime_UTR | 45.0% |
!! | TTTTCCAGTACTGGGAGTGA+TGG | - | chr5_2:15074496-15074515 | None:intergenic | 45.0% |
! | CTCCCAGTACTGGAAAAACA+TGG | + | chr5_2:15074499-15074518 | Msa0759410:three_prime_UTR | 45.0% |
!! | TCGTTTTTGCCATCCTGGTG+GGG | + | chr5_2:15072792-15072811 | Msa0759410:five_prime_UTR | 50.0% |
CAACAACAGCATGCAGCGAT+GGG | - | chr5_2:15072944-15072963 | None:intergenic | 50.0% | |
ACAACAACAGCATGCAGCGA+TGG | - | chr5_2:15072945-15072964 | None:intergenic | 50.0% | |
ATCGCTGCATGCTGTTGTTG+TGG | + | chr5_2:15072944-15072963 | Msa0759410:CDS | 50.0% | |
!! | TCGTTTTTGCCATCCTGGTG+GGG | + | chr5_2:15072792-15072811 | Msa0759410:five_prime_UTR | 50.0% |
CAACAACAGCATGCAGCGAT+GGG | - | chr5_2:15072944-15072963 | None:intergenic | 50.0% | |
ACAACAACAGCATGCAGCGA+TGG | - | chr5_2:15072945-15072964 | None:intergenic | 50.0% | |
ATCGCTGCATGCTGTTGTTG+TGG | + | chr5_2:15072944-15072963 | Msa0759410:CDS | 50.0% | |
ATGCAGCGATGGGACGATGA+AGG | - | chr5_2:15072934-15072953 | None:intergenic | 55.0% | |
GGAATTACACGGCCAGGGTT+TGG | + | chr5_2:15074412-15074431 | Msa0759410:three_prime_UTR | 55.0% | |
!! | ACACGGCCAGGGTTTGGTTT+TGG | + | chr5_2:15074418-15074437 | Msa0759410:three_prime_UTR | 55.0% |
ATGCAGCGATGGGACGATGA+AGG | - | chr5_2:15072934-15072953 | None:intergenic | 55.0% | |
GGAATTACACGGCCAGGGTT+TGG | + | chr5_2:15074412-15074431 | Msa0759410:three_prime_UTR | 55.0% | |
!! | ACACGGCCAGGGTTTGGTTT+TGG | + | chr5_2:15074418-15074437 | Msa0759410:three_prime_UTR | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_2 | gene | 15072791 | 15074575 | 15072791 | ID=Msa0759410;Name=Msa0759410 |
chr5_2 | mRNA | 15072791 | 15074575 | 15072791 | ID=Msa0759410-mRNA-1;Parent=Msa0759410;Name=Msa0759410-mRNA-1;_AED=0.19;_eAED=0.19;_QI=46|0.66|0.75|1|0.66|0.75|4|264|128 |
chr5_2 | exon | 15072791 | 15073004 | 15072791 | ID=Msa0759410-mRNA-1:exon:6825;Parent=Msa0759410-mRNA-1 |
chr5_2 | exon | 15073441 | 15073556 | 15073441 | ID=Msa0759410-mRNA-1:exon:6826;Parent=Msa0759410-mRNA-1 |
chr5_2 | exon | 15073891 | 15073962 | 15073891 | ID=Msa0759410-mRNA-1:exon:6827;Parent=Msa0759410-mRNA-1 |
chr5_2 | exon | 15074281 | 15074575 | 15074281 | ID=Msa0759410-mRNA-1:exon:6828;Parent=Msa0759410-mRNA-1 |
chr5_2 | five_prime_UTR | 15072791 | 15072836 | 15072791 | ID=Msa0759410-mRNA-1:five_prime_utr;Parent=Msa0759410-mRNA-1 |
chr5_2 | CDS | 15072837 | 15073004 | 15072837 | ID=Msa0759410-mRNA-1:cds;Parent=Msa0759410-mRNA-1 |
chr5_2 | CDS | 15073441 | 15073556 | 15073441 | ID=Msa0759410-mRNA-1:cds;Parent=Msa0759410-mRNA-1 |
chr5_2 | CDS | 15073891 | 15073962 | 15073891 | ID=Msa0759410-mRNA-1:cds;Parent=Msa0759410-mRNA-1 |
chr5_2 | CDS | 15074281 | 15074311 | 15074281 | ID=Msa0759410-mRNA-1:cds;Parent=Msa0759410-mRNA-1 |
chr5_2 | three_prime_UTR | 15074312 | 15074575 | 15074312 | ID=Msa0759410-mRNA-1:three_prime_utr;Parent=Msa0759410-mRNA-1 |
Gene Sequence |
Protein sequence |