Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166550 | KEH24352.1 | 89.150 | 341 | 10 | 2 | 1 | 335 | 1 | 320 | 0.0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166550 | sp|O23044|PER3_ARATH | 51.917 | 339 | 132 | 7 | 8 | 335 | 7 | 325 | 3.52e-111 | 329 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166550 | G8A179 | 89.150 | 341 | 10 | 2 | 1 | 335 | 1 | 320 | 0.0 | 617 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0059880 | Msa1166550 | 0.817378 | 3.401254e-52 | -8.615850e-47 |
| Msa0079830 | Msa1166550 | 0.800785 | 1.224691e-48 | -8.615850e-47 |
| Msa0643840 | Msa1166550 | 0.803461 | 3.448355e-49 | -8.615850e-47 |
| Msa0695630 | Msa1166550 | 0.800958 | 1.128803e-48 | -8.615850e-47 |
| Msa0705520 | Msa1166550 | 0.847123 | 1.410752e-59 | -8.615850e-47 |
| Msa0711260 | Msa1166550 | 0.813722 | 2.216075e-51 | -8.615850e-47 |
| Msa0751960 | Msa1166550 | 0.809470 | 1.862257e-50 | -8.615850e-47 |
| Msa0787860 | Msa1166550 | 0.801926 | 7.150520e-49 | -8.615850e-47 |
| Msa0789220 | Msa1166550 | 0.808699 | 2.724756e-50 | -8.615850e-47 |
| Msa0806930 | Msa1166550 | 0.807142 | 5.839387e-50 | -8.615850e-47 |
| Msa0814160 | Msa1166550 | 0.824480 | 7.891242e-54 | -8.615850e-47 |
| Msa0150910 | Msa1166550 | 0.814844 | 1.252598e-51 | -8.615850e-47 |
| Msa0190670 | Msa1166550 | 0.814801 | 1.280563e-51 | -8.615850e-47 |
| Msa0220090 | Msa1166550 | 0.801842 | 7.438909e-49 | -8.615850e-47 |
| Msa0985700 | Msa1166550 | 0.800110 | 1.680696e-48 | -8.615850e-47 |
| Msa1024350 | Msa1166550 | 0.813961 | 1.963131e-51 | -8.615850e-47 |
| Msa1041630 | Msa1166550 | 0.801994 | 6.923347e-49 | -8.615850e-47 |
| Msa1041650 | Msa1166550 | 0.982182 | 1.942734e-154 | -8.615850e-47 |
| Msa1087370 | Msa1166550 | 0.810236 | 1.274257e-50 | -8.615850e-47 |
| Msa1087380 | Msa1166550 | 0.807382 | 5.194988e-50 | -8.615850e-47 |
| Msa1090150 | Msa1166550 | 0.836808 | 7.531569e-57 | -8.615850e-47 |
| Msa0252930 | Msa1166550 | 0.800964 | 1.125732e-48 | -8.615850e-47 |
| Msa0274250 | Msa1166550 | 0.808154 | 3.559767e-50 | -8.615850e-47 |
| Msa1109880 | Msa1166550 | 0.800124 | 1.669387e-48 | -8.615850e-47 |
| Msa1109890 | Msa1166550 | 0.807815 | 4.203199e-50 | -8.615850e-47 |
| Msa1166530 | Msa1166550 | 0.810440 | 1.151234e-50 | -8.615850e-47 |
| Msa1166550 | Msa1177090 | 0.801197 | 1.008933e-48 | -8.615850e-47 |
| Msa1166550 | Msa1214960 | 0.802190 | 6.311336e-49 | -8.615850e-47 |
| Msa1166550 | Msa1233090 | 0.803928 | 2.758296e-49 | -8.615850e-47 |
| Msa1166550 | Msa1357860 | 0.817321 | 3.503729e-52 | -8.615850e-47 |
| Msa1166550 | Msa1402390 | 0.807723 | 4.397477e-50 | -8.615850e-47 |
| Msa1166550 | Msa1407670 | 0.800046 | 1.731931e-48 | -8.615850e-47 |
| Msa1166550 | Msa1449770 | 0.804593 | 2.005167e-49 | -8.615850e-47 |
| Msa1166550 | Msa1459660 | 0.809789 | 1.590177e-50 | -8.615850e-47 |
| Msa0535570 | Msa1166550 | 0.801058 | 1.077082e-48 | -8.615850e-47 |
| Msa0538050 | Msa1166550 | -0.802782 | 4.765272e-49 | -8.615850e-47 |
| Msa0569100 | Msa1166550 | 0.822742 | 2.013308e-53 | -8.615850e-47 |
| Msa0569130 | Msa1166550 | 0.812432 | 4.252421e-51 | -8.615850e-47 |
| Msa0580210 | Msa1166550 | 0.853108 | 2.971780e-61 | -8.615850e-47 |
| Msa0584370 | Msa1166550 | 0.800912 | 1.153306e-48 | -8.615850e-47 |
| Msa0854840 | Msa1166550 | 0.815484 | 9.028783e-52 | -8.615850e-47 |
| Msa0861400 | Msa1166550 | -0.801257 | 9.806828e-49 | -8.615850e-47 |
| Msa0910830 | Msa1166550 | 0.801337 | 9.443949e-49 | -8.615850e-47 |
| Msa0960090 | Msa1166550 | 0.801354 | 9.369915e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166550 | MtrunA17_Chr7g0268501 | 89.150 | 341 | 10 | 2 | 1 | 335 | 1 | 320 | 0.0 | 617 |
| Msa1166550 | MtrunA17_Chr7g0268521 | 89.150 | 341 | 10 | 2 | 1 | 335 | 1 | 320 | 0.0 | 617 |
| Msa1166550 | MtrunA17_Chr4g0024121 | 50.144 | 347 | 140 | 6 | 1 | 335 | 1 | 326 | 1.89e-113 | 332 |
| Msa1166550 | MtrunA17_Chr2g0322861 | 49.714 | 350 | 136 | 8 | 1 | 335 | 62 | 386 | 3.22e-109 | 323 |
| Msa1166550 | MtrunA17_Chr1g0164891 | 47.188 | 320 | 136 | 7 | 29 | 335 | 93 | 392 | 4.39e-86 | 264 |
| Msa1166550 | MtrunA17_Chr8g0371381 | 42.683 | 328 | 149 | 7 | 19 | 335 | 20 | 319 | 2.34e-85 | 260 |
| Msa1166550 | MtrunA17_Chr2g0279041 | 42.216 | 334 | 176 | 5 | 5 | 335 | 6 | 325 | 6.81e-83 | 254 |
| Msa1166550 | MtrunA17_Chr3g0128061 | 42.941 | 340 | 163 | 7 | 6 | 335 | 8 | 326 | 7.81e-83 | 254 |
| Msa1166550 | MtrunA17_Chr5g0405991 | 42.730 | 337 | 150 | 9 | 12 | 335 | 10 | 316 | 8.62e-82 | 251 |
| Msa1166550 | MtrunA17_Chr2g0292211 | 41.176 | 340 | 168 | 6 | 6 | 335 | 24 | 341 | 1.38e-80 | 249 |
| Msa1166550 | MtrunA17_Chr2g0292241 | 40.751 | 346 | 169 | 6 | 7 | 335 | 4 | 330 | 1.99e-80 | 249 |
| Msa1166550 | MtrunA17_Chr1g0175561 | 41.617 | 334 | 176 | 8 | 8 | 335 | 6 | 326 | 3.29e-80 | 247 |
| Msa1166550 | MtrunA17_Chr1g0204011 | 40.719 | 334 | 164 | 7 | 11 | 335 | 14 | 322 | 3.34e-79 | 244 |
| Msa1166550 | MtrunA17_Chr7g0258811 | 40.950 | 337 | 180 | 7 | 4 | 335 | 49 | 371 | 3.61e-79 | 246 |
| Msa1166550 | MtrunA17_Chr1g0157051 | 40.299 | 335 | 165 | 7 | 11 | 334 | 7 | 317 | 7.25e-79 | 243 |
| Msa1166550 | MtrunA17_Chr5g0402581 | 42.136 | 337 | 162 | 9 | 11 | 335 | 11 | 326 | 5.58e-78 | 241 |
| Msa1166550 | MtrunA17_Chr2g0292271 | 41.667 | 336 | 165 | 6 | 12 | 335 | 14 | 330 | 6.02e-78 | 242 |
| Msa1166550 | MtrunA17_Chr2g0291751 | 39.118 | 340 | 178 | 5 | 6 | 335 | 10 | 330 | 1.04e-77 | 241 |
| Msa1166550 | MtrunA17_Chr4g0070951 | 39.412 | 340 | 176 | 6 | 5 | 335 | 11 | 329 | 1.82e-77 | 240 |
| Msa1166550 | MtrunA17_Chr2g0292251 | 41.411 | 326 | 162 | 5 | 20 | 335 | 23 | 329 | 2.07e-77 | 241 |
| Msa1166550 | MtrunA17_Chr4g0063671 | 38.776 | 343 | 177 | 8 | 1 | 335 | 3 | 320 | 4.47e-77 | 239 |
| Msa1166550 | MtrunA17_Chr2g0292261 | 40.413 | 339 | 173 | 5 | 7 | 335 | 11 | 330 | 5.59e-77 | 239 |
| Msa1166550 | MtrunA17_Chr6g0460711 | 40.785 | 331 | 175 | 5 | 7 | 335 | 3 | 314 | 1.13e-76 | 238 |
| Msa1166550 | MtrunA17_Chr2g0292181 | 39.244 | 344 | 186 | 7 | 2 | 335 | 9 | 339 | 9.47e-76 | 237 |
| Msa1166550 | MtrunA17_Chr5g0404721 | 41.390 | 331 | 164 | 5 | 15 | 335 | 20 | 330 | 3.22e-75 | 234 |
| Msa1166550 | MtrunA17_Chr2g0292111 | 39.528 | 339 | 176 | 5 | 7 | 335 | 11 | 330 | 1.04e-74 | 234 |
| Msa1166550 | MtrunA17_Chr1g0194151 | 40.303 | 330 | 164 | 6 | 19 | 335 | 24 | 333 | 3.10e-74 | 232 |
| Msa1166550 | MtrunA17_Chr1g0194271 | 37.883 | 359 | 179 | 7 | 1 | 335 | 2 | 340 | 4.18e-74 | 232 |
| Msa1166550 | MtrunA17_Chr5g0402571 | 40.356 | 337 | 168 | 10 | 11 | 335 | 11 | 326 | 4.22e-74 | 231 |
| Msa1166550 | MtrunA17_Chr8g0372601 | 40.663 | 332 | 167 | 5 | 14 | 335 | 19 | 330 | 1.17e-73 | 231 |
| Msa1166550 | MtrunA17_Chr6g0477071 | 37.941 | 340 | 171 | 10 | 5 | 335 | 34 | 342 | 2.98e-73 | 230 |
| Msa1166550 | MtrunA17_Chr1g0188431 | 38.123 | 341 | 172 | 7 | 3 | 335 | 18 | 327 | 6.62e-73 | 228 |
| Msa1166550 | MtrunA17_Chr2g0292151 | 39.233 | 339 | 177 | 5 | 7 | 335 | 11 | 330 | 3.98e-72 | 227 |
| Msa1166550 | MtrunA17_Chr7g0254201 | 40.127 | 314 | 164 | 7 | 25 | 335 | 20 | 312 | 9.74e-72 | 225 |
| Msa1166550 | MtrunA17_Chr2g0292101 | 39.412 | 340 | 176 | 6 | 7 | 335 | 6 | 326 | 1.96e-71 | 225 |
| Msa1166550 | MtrunA17_Chr2g0320071 | 38.304 | 342 | 173 | 7 | 3 | 335 | 5 | 317 | 2.18e-71 | 224 |
| Msa1166550 | MtrunA17_Chr2g0292091 | 38.643 | 339 | 178 | 6 | 8 | 335 | 6 | 325 | 5.36e-71 | 224 |
| Msa1166550 | MtrunA17_Chr4g0068621 | 42.006 | 319 | 163 | 8 | 22 | 335 | 35 | 336 | 4.18e-70 | 221 |
| Msa1166550 | MtrunA17_Chr3g0129051 | 38.739 | 333 | 166 | 6 | 10 | 331 | 13 | 318 | 1.40e-69 | 219 |
| Msa1166550 | MtrunA17_Chr8g0364291 | 39.365 | 315 | 168 | 6 | 28 | 335 | 26 | 324 | 1.43e-69 | 220 |
| Msa1166550 | MtrunA17_Chr2g0299691 | 40.705 | 312 | 167 | 7 | 29 | 335 | 60 | 358 | 4.47e-69 | 219 |
| Msa1166550 | MtrunA17_Chr7g0225221 | 38.372 | 344 | 176 | 7 | 2 | 335 | 3 | 320 | 9.19e-69 | 218 |
| Msa1166550 | MtrunA17_Chr1g0148021 | 41.279 | 344 | 164 | 10 | 6 | 335 | 9 | 328 | 3.49e-68 | 216 |
| Msa1166550 | MtrunA17_Chr1g0213061 | 37.273 | 330 | 181 | 7 | 11 | 335 | 13 | 321 | 5.10e-68 | 216 |
| Msa1166550 | MtrunA17_Chr2g0296621 | 41.479 | 311 | 157 | 7 | 28 | 335 | 53 | 341 | 5.60e-68 | 216 |
| Msa1166550 | MtrunA17_Chr4g0046131 | 39.623 | 318 | 168 | 8 | 25 | 333 | 42 | 344 | 8.24e-68 | 216 |
| Msa1166550 | MtrunA17_Chr2g0320101 | 37.278 | 338 | 176 | 6 | 7 | 335 | 7 | 317 | 1.72e-67 | 214 |
| Msa1166550 | MtrunA17_Chr3g0114451 | 38.012 | 342 | 181 | 8 | 1 | 335 | 1 | 318 | 2.25e-67 | 214 |
| Msa1166550 | MtrunA17_Chr4g0053871 | 40.634 | 347 | 166 | 10 | 2 | 334 | 3 | 323 | 2.78e-67 | 214 |
| Msa1166550 | MtrunA17_Chr7g0254231 | 38.318 | 321 | 161 | 7 | 23 | 335 | 20 | 311 | 4.37e-67 | 213 |
| Msa1166550 | MtrunA17_Chr2g0292291 | 38.532 | 327 | 171 | 6 | 20 | 335 | 25 | 332 | 1.40e-65 | 210 |
| Msa1166550 | MtrunA17_Chr2g0320091 | 36.578 | 339 | 178 | 6 | 7 | 335 | 7 | 318 | 6.29e-65 | 207 |
| Msa1166550 | MtrunA17_Chr2g0279061 | 43.494 | 269 | 136 | 4 | 69 | 335 | 12 | 266 | 7.40e-65 | 206 |
| Msa1166550 | MtrunA17_Chr4g0013721 | 37.538 | 325 | 171 | 7 | 20 | 335 | 95 | 396 | 9.51e-65 | 210 |
| Msa1166550 | MtrunA17_Chr2g0320061 | 36.747 | 332 | 187 | 7 | 7 | 335 | 7 | 318 | 5.59e-64 | 205 |
| Msa1166550 | MtrunA17_Chr2g0320051 | 37.048 | 332 | 186 | 7 | 7 | 335 | 7 | 318 | 1.02e-63 | 204 |
| Msa1166550 | MtrunA17_Chr5g0400331 | 39.938 | 323 | 165 | 7 | 25 | 335 | 26 | 331 | 1.46e-63 | 204 |
| Msa1166550 | MtrunA17_Chr5g0401431 | 37.931 | 348 | 179 | 9 | 2 | 334 | 3 | 328 | 1.81e-63 | 204 |
| Msa1166550 | MtrunA17_Chr4g0076211 | 40.968 | 310 | 157 | 8 | 30 | 335 | 46 | 333 | 3.70e-63 | 204 |
| Msa1166550 | MtrunA17_Chr1g0197411 | 35.756 | 344 | 191 | 8 | 5 | 335 | 4 | 330 | 5.35e-63 | 203 |
| Msa1166550 | MtrunA17_Chr4g0043391 | 36.842 | 342 | 184 | 9 | 2 | 335 | 7 | 324 | 4.21e-62 | 201 |
| Msa1166550 | MtrunA17_Chr5g0438021 | 37.243 | 341 | 185 | 9 | 1 | 335 | 8 | 325 | 5.60e-62 | 200 |
| Msa1166550 | MtrunA17_Chr4g0072091 | 38.700 | 323 | 163 | 7 | 25 | 335 | 24 | 323 | 2.03e-61 | 199 |
| Msa1166550 | MtrunA17_Chr2g0320031 | 36.152 | 343 | 181 | 8 | 3 | 335 | 5 | 319 | 3.03e-61 | 198 |
| Msa1166550 | MtrunA17_Chr5g0432441 | 37.059 | 340 | 178 | 11 | 10 | 335 | 9 | 326 | 3.21e-61 | 198 |
| Msa1166550 | MtrunA17_Chr5g0432331 | 37.537 | 341 | 187 | 7 | 1 | 335 | 32 | 352 | 4.13e-61 | 199 |
| Msa1166550 | MtrunA17_Chr1g0155611 | 38.199 | 322 | 168 | 6 | 25 | 335 | 46 | 347 | 7.64e-61 | 198 |
| Msa1166550 | MtrunA17_Chr7g0244461 | 36.527 | 334 | 173 | 9 | 12 | 335 | 8 | 312 | 1.30e-60 | 196 |
| Msa1166550 | MtrunA17_Chr7g0224371 | 35.294 | 340 | 191 | 7 | 1 | 335 | 7 | 322 | 2.15e-60 | 196 |
| Msa1166550 | MtrunA17_Chr7g0244451 | 34.884 | 344 | 187 | 7 | 1 | 335 | 1 | 316 | 4.60e-60 | 195 |
| Msa1166550 | MtrunA17_Chr5g0432351 | 37.026 | 343 | 186 | 10 | 1 | 335 | 1 | 321 | 4.61e-60 | 195 |
| Msa1166550 | MtrunA17_Chr4g0013821 | 35.625 | 320 | 174 | 7 | 25 | 335 | 28 | 324 | 1.17e-59 | 195 |
| Msa1166550 | MtrunA17_Chr3g0129061 | 36.937 | 333 | 172 | 6 | 10 | 331 | 13 | 318 | 1.22e-59 | 194 |
| Msa1166550 | MtrunA17_Chr2g0329641 | 36.991 | 319 | 174 | 7 | 25 | 335 | 36 | 335 | 1.41e-59 | 194 |
| Msa1166550 | MtrunA17_Chr4g0038171 | 37.578 | 322 | 166 | 8 | 25 | 335 | 24 | 321 | 2.40e-59 | 193 |
| Msa1166550 | MtrunA17_Chr4g0013201 | 36.392 | 316 | 173 | 7 | 25 | 335 | 46 | 338 | 3.19e-59 | 193 |
| Msa1166550 | MtrunA17_Chr4g0013191 | 35.028 | 354 | 184 | 8 | 7 | 335 | 8 | 340 | 1.24e-58 | 192 |
| Msa1166550 | MtrunA17_Chr5g0432341 | 36.103 | 349 | 181 | 10 | 1 | 335 | 1 | 321 | 1.49e-58 | 191 |
| Msa1166550 | MtrunA17_Chr4g0013171 | 36.164 | 318 | 175 | 8 | 24 | 335 | 26 | 321 | 1.86e-58 | 191 |
| Msa1166550 | MtrunA17_Chr3g0106901 | 36.228 | 334 | 186 | 6 | 5 | 335 | 14 | 323 | 3.43e-58 | 190 |
| Msa1166550 | MtrunA17_Chr3g0107881 | 35.942 | 345 | 178 | 9 | 5 | 335 | 9 | 324 | 3.49e-58 | 190 |
| Msa1166550 | MtrunA17_Chr2g0278671 | 37.695 | 321 | 169 | 8 | 25 | 335 | 24 | 323 | 4.30e-58 | 190 |
| Msa1166550 | MtrunA17_Chr3g0129041 | 37.389 | 337 | 173 | 6 | 10 | 335 | 13 | 322 | 7.87e-58 | 189 |
| Msa1166550 | MtrunA17_Chr4g0038161 | 34.884 | 344 | 189 | 8 | 3 | 335 | 1 | 320 | 1.06e-57 | 189 |
| Msa1166550 | MtrunA17_Chr4g0038151 | 34.783 | 345 | 189 | 9 | 3 | 335 | 1 | 321 | 1.43e-57 | 189 |
| Msa1166550 | MtrunA17_Chr3g0106921 | 34.925 | 335 | 188 | 9 | 8 | 335 | 9 | 320 | 2.22e-57 | 188 |
| Msa1166550 | MtrunA17_Chr4g0013181 | 36.250 | 320 | 164 | 8 | 28 | 335 | 62 | 353 | 3.86e-57 | 189 |
| Msa1166550 | MtrunA17_Chr2g0316481 | 34.731 | 334 | 198 | 6 | 19 | 332 | 70 | 403 | 3.87e-57 | 190 |
| Msa1166550 | MtrunA17_Chr2g0316831 | 34.571 | 350 | 177 | 8 | 19 | 332 | 106 | 439 | 9.63e-57 | 190 |
| Msa1166550 | MtrunA17_Chr3g0136751 | 37.391 | 345 | 178 | 8 | 2 | 335 | 5 | 322 | 1.61e-56 | 186 |
| Msa1166550 | MtrunA17_Chr2g0316791 | 34.731 | 334 | 198 | 6 | 19 | 332 | 70 | 403 | 1.64e-56 | 188 |
| Msa1166550 | MtrunA17_Chr6g0451571 | 36.471 | 340 | 185 | 11 | 5 | 335 | 17 | 334 | 1.27e-55 | 184 |
| Msa1166550 | MtrunA17_Chr5g0413051 | 34.049 | 326 | 187 | 8 | 21 | 335 | 69 | 377 | 1.74e-55 | 185 |
| Msa1166550 | MtrunA17_Chr2g0316191 | 33.429 | 350 | 182 | 6 | 19 | 332 | 70 | 404 | 3.36e-55 | 185 |
| Msa1166550 | MtrunA17_Chr2g0311251 | 35.417 | 336 | 196 | 8 | 19 | 334 | 5 | 339 | 1.29e-54 | 182 |
| Msa1166550 | MtrunA17_Chr6g0467161 | 34.582 | 347 | 181 | 10 | 6 | 335 | 19 | 336 | 1.40e-54 | 181 |
| Msa1166550 | MtrunA17_Chr6g0467251 | 33.721 | 344 | 185 | 11 | 6 | 335 | 14 | 328 | 1.76e-54 | 181 |
| Msa1166550 | MtrunA17_Chr2g0311241 | 33.422 | 377 | 189 | 9 | 19 | 334 | 54 | 429 | 5.76e-54 | 182 |
| Msa1166550 | MtrunA17_Chr6g0467121 | 35.362 | 345 | 182 | 12 | 5 | 335 | 46 | 363 | 9.91e-54 | 181 |
| Msa1166550 | MtrunA17_Chr4g0075241 | 33.230 | 322 | 189 | 7 | 21 | 335 | 25 | 327 | 1.91e-49 | 168 |
| Msa1166550 | MtrunA17_Chr5g0421411 | 35.906 | 298 | 163 | 10 | 49 | 335 | 5 | 285 | 7.17e-49 | 165 |
| Msa1166550 | MtrunA17_Chr4g0074851 | 33.529 | 340 | 186 | 10 | 5 | 335 | 20 | 328 | 3.34e-47 | 162 |
| Msa1166550 | MtrunA17_Chr2g0316811 | 38.428 | 229 | 122 | 3 | 19 | 228 | 44 | 272 | 1.92e-45 | 157 |
| Msa1166550 | MtrunA17_Chr1g0181511 | 33.028 | 327 | 173 | 9 | 25 | 335 | 27 | 323 | 9.74e-45 | 155 |
| Msa1166550 | MtrunA17_Chr1g0181431 | 32.036 | 334 | 178 | 10 | 18 | 335 | 23 | 323 | 2.22e-44 | 154 |
| Msa1166550 | MtrunA17_Chr1g0181481 | 31.193 | 327 | 179 | 9 | 25 | 335 | 27 | 323 | 1.59e-41 | 147 |
| Msa1166550 | MtrunA17_Chr4g0004591 | 30.120 | 332 | 157 | 6 | 25 | 334 | 77 | 355 | 7.84e-39 | 140 |
| Msa1166550 | MtrunA17_Chr5g0432401 | 31.858 | 339 | 162 | 10 | 4 | 334 | 8 | 285 | 9.70e-39 | 139 |
| Msa1166550 | MtrunA17_Chr7g0268491 | 68.868 | 106 | 6 | 2 | 236 | 335 | 13 | 97 | 1.62e-38 | 132 |
| Msa1166550 | MtrunA17_Chr2g0292281 | 37.555 | 229 | 105 | 6 | 116 | 335 | 17 | 216 | 1.01e-34 | 127 |
| Msa1166550 | MtrunA17_Chr2g0316141 | 31.449 | 283 | 155 | 8 | 71 | 332 | 11 | 275 | 2.42e-31 | 119 |
| Msa1166550 | MtrunA17_Chr2g0316181 | 31.449 | 283 | 155 | 8 | 71 | 332 | 11 | 275 | 2.42e-31 | 119 |
| Msa1166550 | MtrunA17_Chr3g0114461 | 33.831 | 201 | 111 | 4 | 136 | 335 | 13 | 192 | 2.24e-28 | 108 |
| Msa1166550 | MtrunA17_Chr3g0114491 | 48.598 | 107 | 54 | 1 | 25 | 130 | 18 | 124 | 3.83e-28 | 106 |
| Msa1166550 | MtrunA17_Chr1g0196191 | 58.537 | 82 | 31 | 1 | 67 | 148 | 27 | 105 | 2.53e-24 | 97.1 |
| Msa1166550 | MtrunA17_Chr6g0468731 | 62.687 | 67 | 22 | 1 | 64 | 130 | 22 | 85 | 1.05e-22 | 90.5 |
| Msa1166550 | MtrunA17_Chr1g0181491 | 38.053 | 113 | 69 | 1 | 17 | 129 | 4 | 115 | 5.32e-21 | 87.8 |
| Msa1166550 | MtrunA17_Chr7g0254181 | 42.105 | 114 | 61 | 2 | 77 | 188 | 12 | 122 | 2.08e-18 | 80.9 |
| Msa1166550 | MtrunA17_Chr5g0432321 | 34.211 | 114 | 67 | 2 | 143 | 256 | 17 | 122 | 1.32e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166550 | AT1G05260.1 | 51.917 | 339 | 132 | 7 | 8 | 335 | 7 | 325 | 3.58e-112 | 329 |
| Msa1166550 | AT4G11290.1 | 51.327 | 339 | 135 | 7 | 7 | 335 | 8 | 326 | 6.32e-109 | 321 |
| Msa1166550 | AT1G05240.1 | 47.785 | 316 | 138 | 6 | 28 | 335 | 29 | 325 | 9.08e-101 | 300 |
| Msa1166550 | AT1G05250.1 | 47.785 | 316 | 138 | 6 | 28 | 335 | 29 | 325 | 9.08e-101 | 300 |
| Msa1166550 | AT3G01190.1 | 48.824 | 340 | 143 | 7 | 4 | 335 | 5 | 321 | 2.33e-99 | 296 |
| Msa1166550 | AT3G21770.1 | 48.182 | 330 | 140 | 7 | 16 | 334 | 18 | 327 | 8.48e-99 | 295 |
| Msa1166550 | AT5G15180.1 | 49.216 | 319 | 133 | 6 | 25 | 335 | 32 | 329 | 4.52e-98 | 293 |
| Msa1166550 | AT2G39040.1 | 47.273 | 330 | 134 | 7 | 23 | 335 | 44 | 350 | 2.16e-96 | 290 |
| Msa1166550 | AT5G42180.1 | 40.469 | 341 | 169 | 6 | 3 | 334 | 1 | 316 | 1.57e-81 | 250 |
| Msa1166550 | AT5G64120.1 | 42.492 | 313 | 157 | 7 | 26 | 335 | 36 | 328 | 1.06e-79 | 246 |
| Msa1166550 | AT2G41480.1 | 39.003 | 341 | 180 | 6 | 4 | 335 | 7 | 328 | 5.73e-78 | 242 |
| Msa1166550 | AT5G06720.1 | 39.701 | 335 | 185 | 5 | 5 | 335 | 12 | 333 | 7.16e-78 | 242 |
| Msa1166550 | AT5G17820.1 | 40.179 | 336 | 174 | 7 | 3 | 335 | 2 | 313 | 3.88e-77 | 239 |
| Msa1166550 | AT5G66390.1 | 41.317 | 334 | 162 | 6 | 14 | 335 | 22 | 333 | 3.01e-76 | 238 |
| Msa1166550 | AT3G03670.1 | 39.412 | 340 | 182 | 6 | 1 | 335 | 1 | 321 | 3.22e-76 | 237 |
| Msa1166550 | AT5G17820.2 | 39.474 | 342 | 168 | 7 | 3 | 335 | 55 | 366 | 8.94e-76 | 237 |
| Msa1166550 | AT5G64100.1 | 41.720 | 314 | 155 | 7 | 28 | 335 | 40 | 331 | 1.43e-75 | 236 |
| Msa1166550 | AT4G33420.1 | 40.118 | 339 | 162 | 8 | 8 | 335 | 17 | 325 | 1.65e-75 | 235 |
| Msa1166550 | AT5G06730.1 | 40.299 | 335 | 183 | 6 | 5 | 335 | 13 | 334 | 4.34e-75 | 235 |
| Msa1166550 | AT2G24800.1 | 44.582 | 323 | 143 | 8 | 25 | 335 | 31 | 329 | 4.72e-75 | 234 |
| Msa1166550 | AT4G33420.2 | 40.118 | 339 | 162 | 8 | 8 | 335 | 64 | 372 | 1.10e-74 | 235 |
| Msa1166550 | AT5G51890.1 | 41.411 | 326 | 151 | 9 | 23 | 335 | 24 | 322 | 1.77e-74 | 233 |
| Msa1166550 | AT4G31760.1 | 41.246 | 337 | 161 | 7 | 11 | 335 | 15 | 326 | 6.09e-74 | 231 |
| Msa1166550 | AT2G18150.1 | 39.628 | 323 | 165 | 5 | 23 | 335 | 34 | 336 | 9.48e-74 | 231 |
| Msa1166550 | AT5G39580.1 | 38.576 | 337 | 182 | 9 | 3 | 335 | 4 | 319 | 3.68e-73 | 229 |
| Msa1166550 | AT4G36430.1 | 38.298 | 329 | 185 | 5 | 11 | 335 | 16 | 330 | 8.94e-73 | 228 |
| Msa1166550 | AT2G18140.1 | 38.838 | 327 | 167 | 6 | 22 | 335 | 29 | 335 | 1.95e-72 | 228 |
| Msa1166550 | AT2G38380.1 | 39.296 | 341 | 175 | 7 | 8 | 335 | 12 | 333 | 3.83e-72 | 228 |
| Msa1166550 | AT5G19890.1 | 38.973 | 331 | 171 | 7 | 14 | 335 | 19 | 327 | 1.65e-71 | 225 |
| Msa1166550 | AT5G14130.1 | 41.279 | 344 | 165 | 10 | 3 | 335 | 13 | 330 | 2.41e-71 | 225 |
| Msa1166550 | AT5G19880.1 | 39.144 | 327 | 179 | 7 | 16 | 335 | 16 | 329 | 4.52e-71 | 224 |
| Msa1166550 | AT5G14130.2 | 41.279 | 344 | 165 | 10 | 3 | 335 | 54 | 371 | 6.97e-71 | 225 |
| Msa1166550 | AT3G32980.1 | 38.576 | 337 | 178 | 7 | 11 | 335 | 15 | 334 | 9.72e-71 | 224 |
| Msa1166550 | AT2G38390.1 | 38.416 | 341 | 178 | 7 | 8 | 335 | 12 | 333 | 1.06e-70 | 224 |
| Msa1166550 | AT4G37530.1 | 40.798 | 326 | 159 | 9 | 23 | 335 | 25 | 329 | 2.36e-70 | 222 |
| Msa1166550 | AT1G44970.1 | 41.033 | 329 | 165 | 5 | 17 | 335 | 37 | 346 | 3.08e-70 | 223 |
| Msa1166550 | AT4G37520.1 | 40.491 | 326 | 160 | 9 | 23 | 335 | 25 | 329 | 4.70e-70 | 221 |
| Msa1166550 | AT2G18980.1 | 39.942 | 343 | 168 | 7 | 5 | 335 | 7 | 323 | 3.34e-69 | 219 |
| Msa1166550 | AT4G37520.2 | 40.432 | 324 | 160 | 9 | 23 | 335 | 25 | 326 | 4.67e-69 | 219 |
| Msa1166550 | AT1G71695.1 | 40.312 | 320 | 152 | 9 | 28 | 335 | 47 | 339 | 6.13e-69 | 219 |
| Msa1166550 | AT5G67400.1 | 39.080 | 348 | 175 | 9 | 4 | 335 | 3 | 329 | 1.16e-68 | 218 |
| Msa1166550 | AT4G26010.1 | 38.438 | 333 | 174 | 9 | 7 | 335 | 4 | 309 | 2.36e-68 | 216 |
| Msa1166550 | AT3G49960.1 | 40.491 | 326 | 160 | 8 | 23 | 335 | 25 | 329 | 2.86e-68 | 217 |
| Msa1166550 | AT4G25980.1 | 39.514 | 329 | 170 | 8 | 16 | 335 | 18 | 326 | 3.22e-68 | 217 |
| Msa1166550 | AT4G26010.2 | 38.438 | 333 | 174 | 9 | 7 | 335 | 32 | 337 | 5.06e-68 | 216 |
| Msa1166550 | AT3G50990.1 | 39.264 | 326 | 168 | 5 | 20 | 335 | 36 | 341 | 7.07e-68 | 216 |
| Msa1166550 | AT4G08770.1 | 37.461 | 323 | 175 | 6 | 23 | 335 | 22 | 327 | 3.34e-67 | 215 |
| Msa1166550 | AT5G22410.1 | 37.048 | 332 | 181 | 8 | 7 | 331 | 11 | 321 | 5.43e-67 | 214 |
| Msa1166550 | AT5G64110.1 | 38.994 | 318 | 164 | 6 | 26 | 335 | 35 | 330 | 4.80e-66 | 211 |
| Msa1166550 | AT4G30170.1 | 39.009 | 323 | 161 | 7 | 25 | 335 | 27 | 325 | 1.18e-65 | 210 |
| Msa1166550 | AT3G49110.1 | 37.771 | 323 | 174 | 7 | 23 | 335 | 31 | 336 | 5.32e-65 | 209 |
| Msa1166550 | AT3G49120.1 | 37.846 | 325 | 175 | 7 | 21 | 335 | 28 | 335 | 6.15e-65 | 209 |
| Msa1166550 | AT1G77100.1 | 38.125 | 320 | 165 | 7 | 25 | 335 | 24 | 319 | 2.54e-64 | 206 |
| Msa1166550 | AT1G14550.1 | 38.050 | 318 | 168 | 8 | 25 | 335 | 26 | 321 | 3.30e-64 | 206 |
| Msa1166550 | AT4G08780.1 | 36.842 | 323 | 177 | 6 | 23 | 335 | 22 | 327 | 8.63e-64 | 206 |
| Msa1166550 | AT1G49570.1 | 38.820 | 322 | 161 | 7 | 24 | 331 | 47 | 346 | 2.94e-63 | 204 |
| Msa1166550 | AT2G35380.1 | 39.877 | 326 | 167 | 6 | 22 | 335 | 27 | 335 | 3.57e-63 | 204 |
| Msa1166550 | AT4G37530.2 | 44.141 | 256 | 129 | 6 | 23 | 265 | 25 | 279 | 9.44e-63 | 201 |
| Msa1166550 | AT4G33870.1 | 35.362 | 345 | 197 | 6 | 14 | 332 | 54 | 398 | 4.38e-62 | 203 |
| Msa1166550 | AT3G28200.1 | 38.050 | 318 | 168 | 7 | 25 | 335 | 21 | 316 | 1.15e-61 | 199 |
| Msa1166550 | AT4G17690.1 | 37.188 | 320 | 171 | 8 | 24 | 335 | 25 | 322 | 2.85e-61 | 199 |
| Msa1166550 | AT2G22420.1 | 36.223 | 323 | 174 | 7 | 22 | 335 | 20 | 319 | 7.97e-61 | 197 |
| Msa1166550 | AT5G05340.1 | 37.342 | 316 | 172 | 7 | 25 | 335 | 30 | 324 | 1.20e-60 | 197 |
| Msa1166550 | AT5G40150.1 | 38.558 | 319 | 166 | 8 | 25 | 335 | 32 | 328 | 1.94e-59 | 194 |
| Msa1166550 | AT1G34510.1 | 35.736 | 333 | 183 | 8 | 7 | 335 | 4 | 309 | 3.70e-59 | 193 |
| Msa1166550 | AT1G14540.1 | 35.503 | 338 | 192 | 7 | 1 | 335 | 1 | 315 | 4.64e-59 | 192 |
| Msa1166550 | AT4G16270.1 | 37.299 | 311 | 175 | 7 | 29 | 335 | 54 | 348 | 1.38e-58 | 192 |
| Msa1166550 | AT5G47000.1 | 34.018 | 341 | 185 | 8 | 11 | 335 | 14 | 330 | 2.74e-57 | 189 |
| Msa1166550 | AT2G34060.1 | 37.107 | 318 | 176 | 8 | 25 | 333 | 42 | 344 | 4.90e-56 | 186 |
| Msa1166550 | AT5G24070.1 | 34.591 | 318 | 178 | 7 | 28 | 335 | 38 | 335 | 1.06e-55 | 185 |
| Msa1166550 | AT1G30870.1 | 36.250 | 320 | 164 | 9 | 28 | 335 | 54 | 345 | 1.13e-55 | 185 |
| Msa1166550 | AT1G68850.1 | 35.057 | 348 | 189 | 11 | 5 | 335 | 8 | 335 | 1.13e-55 | 184 |
| Msa1166550 | AT2G43480.1 | 34.139 | 331 | 185 | 9 | 18 | 335 | 25 | 335 | 7.82e-54 | 180 |
| Msa1166550 | AT5G58400.1 | 34.694 | 343 | 180 | 10 | 9 | 335 | 11 | 325 | 1.90e-53 | 179 |
| Msa1166550 | AT5G58390.1 | 33.529 | 340 | 187 | 8 | 8 | 335 | 4 | 316 | 3.69e-52 | 175 |
| Msa1166550 | AT1G24110.1 | 34.884 | 344 | 181 | 9 | 5 | 335 | 9 | 322 | 1.58e-51 | 174 |
| Msa1166550 | AT4G21960.1 | 32.845 | 341 | 198 | 7 | 6 | 335 | 7 | 327 | 1.41e-48 | 166 |
| Msa1166550 | AT3G17070.1 | 33.819 | 343 | 195 | 11 | 6 | 335 | 16 | 339 | 2.35e-48 | 166 |
| Msa1166550 | AT2G37130.1 | 31.790 | 324 | 186 | 8 | 23 | 335 | 28 | 327 | 2.32e-44 | 155 |
| Msa1166550 | AT5G39580.2 | 41.579 | 190 | 104 | 4 | 3 | 190 | 4 | 188 | 8.15e-44 | 151 |
| Msa1166550 | AT2G37130.2 | 31.661 | 319 | 183 | 8 | 28 | 335 | 2 | 296 | 2.46e-43 | 151 |
| Msa1166550 | AT2G24800.2 | 50.000 | 162 | 76 | 2 | 28 | 187 | 34 | 192 | 7.92e-42 | 146 |
| Msa1166550 | AT4G25980.2 | 46.023 | 176 | 89 | 4 | 16 | 189 | 63 | 234 | 9.59e-42 | 147 |
| Msa1166550 | AT2G35380.2 | 36.260 | 262 | 138 | 6 | 86 | 335 | 3 | 247 | 2.76e-38 | 137 |
| Msa1166550 | AT3G17070.2 | 32.616 | 279 | 158 | 11 | 67 | 335 | 18 | 276 | 5.48e-31 | 118 |
Find 68 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATGTTGTTGAGCTATT+TGG | 0.173041 | 7_4:+58638966 | None:intergenic |
| CATGACTTGGTTGTATTATC+AGG | 0.207951 | 7_4:-58639363 | Msa1166550:intron |
| ATTCTTCCTTGTAGCTTCTA+TGG | 0.251513 | 7_4:-58640113 | Msa1166550:CDS |
| CAATCTAGAAACATTGTTAA+TGG | 0.253287 | 7_4:-58638870 | Msa1166550:CDS |
| AAGCCTGCTAATGATAAATT+AGG | 0.273981 | 7_4:+58639718 | None:intergenic |
| GATTAGGGCTTCAATGCTTC+TGG | 0.289264 | 7_4:+58639455 | None:intergenic |
| GTCACTTAGGCCTTGGCATT+TGG | 0.297824 | 7_4:+58639013 | None:intergenic |
| AGTTTGGACAAGTGGATGTT+GGG | 0.308513 | 7_4:-58638838 | Msa1166550:CDS |
| TTCAAGAAATTTGCATAAGT+TGG | 0.318870 | 7_4:+58639038 | None:intergenic |
| ATCAACTTGGCTGGCAGCTC+AGG | 0.326426 | 7_4:+58639968 | None:intergenic |
| AGGGACCCTTGTTAATGAAT+TGG | 0.329632 | 7_4:-58637608 | Msa1166550:CDS |
| AATCTAGAAACATTGTTAAT+GGG | 0.340860 | 7_4:-58638869 | Msa1166550:CDS |
| AGAAGACATAAAAGAAGCTT+TGG | 0.382183 | 7_4:-58639686 | Msa1166550:CDS |
| TCAGCACATGATACAATTCC+TGG | 0.383508 | 7_4:+58639652 | None:intergenic |
| AAGGTGCTGGAATATTGATT+AGG | 0.388624 | 7_4:+58639439 | None:intergenic |
| AACAATGTTTCTAGATTGCT+TGG | 0.397011 | 7_4:+58638875 | None:intergenic |
| AGGTGCTGGAATATTGATTA+GGG | 0.399370 | 7_4:+58639440 | None:intergenic |
| CCCTACAACATGTCTCTTCA+AGG | 0.409923 | 7_4:-58639991 | Msa1166550:CDS |
| GTCTGAGCTGAGTGATGTTA+TGG | 0.410714 | 7_4:+58639415 | None:intergenic |
| AGCAACGTGGGAAGTGCTTA+CGG | 0.416975 | 7_4:-58639499 | Msa1166550:CDS |
| TTTATAGGAGCACACACAAT+TGG | 0.421672 | 7_4:-58639137 | Msa1166550:intron |
| ATTGCAACTTATTCAGCAAC+AGG | 0.429672 | 7_4:-58639106 | Msa1166550:CDS |
| ATTCCTAATTTATCATTAGC+AGG | 0.434054 | 7_4:-58639721 | Msa1166550:CDS |
| GTTCGAATGGAGAAATTAGA+AGG | 0.434571 | 7_4:-58637513 | Msa1166550:CDS |
| TTAGTGAAGGAGGCAGCCTC+AGG | 0.457227 | 7_4:-58640069 | Msa1166550:CDS |
| TGGTGGTGTCACTTAGGCCT+TGG | 0.470093 | 7_4:+58639006 | None:intergenic |
| GCAACGTGGGAAGTGCTTAC+GGG | 0.476545 | 7_4:-58639498 | Msa1166550:CDS |
| GTGGATGTTGGGGTTCAACT+TGG | 0.477888 | 7_4:-58638827 | Msa1166550:CDS |
| AGACATAAAAGAAGCTTTGG+AGG | 0.490687 | 7_4:-58639683 | Msa1166550:CDS |
| TAGTTTGGACAAGTGGATGT+TGG | 0.491028 | 7_4:-58638839 | Msa1166550:CDS |
| TGCTGGTAACACTGCGGAGA+AGG | 0.493705 | 7_4:-58639749 | Msa1166550:CDS |
| AAAGCTTACTCTTCATGACT+TGG | 0.493798 | 7_4:-58639376 | Msa1166550:CDS |
| CTGTTGTGGTGGTGTCACTT+AGG | 0.496811 | 7_4:+58639000 | None:intergenic |
| GAAGAGGATGGGAGCTATTG+AGG | 0.498561 | 7_4:-58637545 | Msa1166550:CDS |
| TGCAGTCTTATCAACTTGGC+TGG | 0.499023 | 7_4:+58639959 | None:intergenic |
| GTTTCAGGGGTGTGACGCAT+CGG | 0.508181 | 7_4:-58639788 | Msa1166550:intron |
| TTCTCAGTCAATGAAGAGGA+TGG | 0.515611 | 7_4:-58637557 | Msa1166550:CDS |
| GCATAAGTTGGATTCAGAGA+TGG | 0.521194 | 7_4:+58639050 | None:intergenic |
| GGAGCTATTGAGGTCCTCAC+TGG | 0.526293 | 7_4:-58637535 | Msa1166550:CDS |
| TGTTTCATTGGGATTAGTGA+AGG | 0.528117 | 7_4:-58640082 | Msa1166550:CDS |
| GCTTTGGAGGAGAAATGTCC+AGG | 0.528854 | 7_4:-58639670 | Msa1166550:CDS |
| TGGATCCATCTCTACTGTTG+TGG | 0.535692 | 7_4:+58638986 | None:intergenic |
| CACCACCACAACAGTAGAGA+TGG | 0.539448 | 7_4:-58638991 | Msa1166550:CDS |
| CTCCGCAGTGTTACCAGCAG+TGG | 0.544816 | 7_4:+58639753 | None:intergenic |
| TTAACAATCTCCTCAGCTTG+AGG | 0.546103 | 7_4:+58640022 | None:intergenic |
| AAAATGCAGTCTTATCAACT+TGG | 0.547582 | 7_4:+58639955 | None:intergenic |
| CCTTGAAGAGACATGTTGTA+GGG | 0.548319 | 7_4:+58639991 | None:intergenic |
| GCCTTGAAGAGACATGTTGT+AGG | 0.550855 | 7_4:+58639990 | None:intergenic |
| GTGAAACCAATTCATTAACA+AGG | 0.557848 | 7_4:+58637602 | None:intergenic |
| ATCCATCTCTACTGTTGTGG+TGG | 0.572153 | 7_4:+58638989 | None:intergenic |
| TGAAACCAATTCATTAACAA+GGG | 0.575268 | 7_4:+58637603 | None:intergenic |
| GAGGTCCTCACTGGTTCGAA+TGG | 0.575650 | 7_4:-58637526 | Msa1166550:CDS |
| TCTCAGTCAATGAAGAGGAT+GGG | 0.577113 | 7_4:-58637556 | Msa1166550:CDS |
| TGCTAATGATAAATTAGGAA+TGG | 0.579765 | 7_4:+58639723 | None:intergenic |
| GTTTGGACAAGTGGATGTTG+GGG | 0.585085 | 7_4:-58638837 | Msa1166550:CDS |
| GTGATGTTATGGAAAGGTGC+TGG | 0.588441 | 7_4:+58639426 | None:intergenic |
| GTGCTTACGGGTAGAAGAGA+TGG | 0.590073 | 7_4:-58639486 | Msa1166550:CDS |
| TTCTTGAAGACCAAATGCCA+AGG | 0.601738 | 7_4:-58639023 | Msa1166550:CDS |
| AAAGCACCATAGAAGCTACA+AGG | 0.611637 | 7_4:+58640107 | None:intergenic |
| TTCATTGGGATTAGTGAAGG+AGG | 0.626140 | 7_4:-58640079 | Msa1166550:CDS |
| GTTTAATGATAAAGCAACGT+GGG | 0.643577 | 7_4:-58639511 | Msa1166550:CDS |
| GGAGCACACACAATTGGAGT+AGG | 0.649757 | 7_4:-58639131 | Msa1166550:CDS |
| GAAGTCATGTCCTCAAGCTG+AGG | 0.657533 | 7_4:-58640032 | Msa1166550:CDS |
| ATGTGCTGATATACTCACAT+TGG | 0.669867 | 7_4:-58639638 | Msa1166550:CDS |
| TTTCTCCATTCGAACCAGTG+AGG | 0.691397 | 7_4:+58637521 | None:intergenic |
| AGCTGAGTGATGTTATGGAA+AGG | 0.700700 | 7_4:+58639420 | None:intergenic |
| AGTTTAATGATAAAGCAACG+TGG | 0.776571 | 7_4:-58639512 | Msa1166550:CDS |
| GTCCACTGCTGGTAACACTG+CGG | 0.786302 | 7_4:-58639755 | Msa1166550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGGAATATGTATAAATTAA+TGG | + | chr7_4:58638043-58638062 | None:intergenic | 15.0% |
| !! | AAAATATGAATGAATAAATC+AGG | + | chr7_4:58638078-58638097 | None:intergenic | 15.0% |
| !! | AATTAAATGTAAGAAATCTA+TGG | + | chr7_4:58639281-58639300 | None:intergenic | 15.0% |
| !! | ACTAAAAAAATTTGAATCTA+TGG | - | chr7_4:58639365-58639384 | Msa1166550:CDS | 15.0% |
| !! | TGTAAATTAAATGAAGAAAA+TGG | - | chr7_4:58639866-58639885 | Msa1166550:intron | 15.0% |
| !! | ACTTAAATTATTACATCTGT+TGG | + | chr7_4:58638393-58638412 | None:intergenic | 20.0% |
| !! | AGATGTAATAATTTAAGTCA+CGG | - | chr7_4:58638395-58638414 | Msa1166550:intron | 20.0% |
| !! | TACTAGTTAAATTAACATGT+TGG | - | chr7_4:58638447-58638466 | Msa1166550:intron | 20.0% |
| !! | TGTTGGATATATGTATTTAT+AGG | - | chr7_4:58638464-58638483 | Msa1166550:intron | 20.0% |
| !! | AATCTAGAAACATTGTTAAT+GGG | - | chr7_4:58638747-58638766 | Msa1166550:intron | 20.0% |
| !!! | TTAATGGGTTAATTTTAGTT+TGG | - | chr7_4:58638762-58638781 | Msa1166550:intron | 20.0% |
| !!! | CATGGTTTTGAATTTTTTTA+TGG | + | chr7_4:58639212-58639231 | None:intergenic | 20.0% |
| !! | CATAAAAAAATTCAAAACCA+TGG | - | chr7_4:58639210-58639229 | Msa1166550:intron | 20.0% |
| ! | TCTTATAAAAATTCTTCCTG+AGG | + | chr7_4:58637566-58637585 | None:intergenic | 25.0% |
| !!! | ATTTTCATGACTGTTTTGTT+AGG | - | chr7_4:58637679-58637698 | Msa1166550:intron | 25.0% |
| !!! | TTTTCATGACTGTTTTGTTA+GGG | - | chr7_4:58637680-58637699 | Msa1166550:intron | 25.0% |
| ! | CTAAAATTGTAAAGATCAAG+GGG | + | chr7_4:58637712-58637731 | None:intergenic | 25.0% |
| ! | GCTAAAATTGTAAAGATCAA+GGG | + | chr7_4:58637713-58637732 | None:intergenic | 25.0% |
| ! | AGCTAAAATTGTAAAGATCA+AGG | + | chr7_4:58637714-58637733 | None:intergenic | 25.0% |
| ! | TGCTAATGATAAATTAGGAA+TGG | + | chr7_4:58637896-58637915 | None:intergenic | 25.0% |
| ! | ATTCCTAATTTATCATTAGC+AGG | - | chr7_4:58637895-58637914 | Msa1166550:intron | 25.0% |
| ! | CATGTTAATTTAACTAGTAC+TGG | + | chr7_4:58638446-58638465 | None:intergenic | 25.0% |
| ! | TTCAAGAAATTTGCATAAGT+TGG | + | chr7_4:58638581-58638600 | None:intergenic | 25.0% |
| ! | CAATCTAGAAACATTGTTAA+TGG | - | chr7_4:58638746-58638765 | Msa1166550:intron | 25.0% |
| !!! | TTAATTTTAGTTTGGACAAG+TGG | - | chr7_4:58638770-58638789 | Msa1166550:intron | 25.0% |
| !!! | AGTTTGATGTGAAGATTTTT+TGG | - | chr7_4:58639511-58639530 | Msa1166550:CDS | 25.0% |
| !!! | GTTTGATGTGAAGATTTTTT+GGG | - | chr7_4:58639512-58639531 | Msa1166550:CDS | 25.0% |
| ! | AAGCACATAAACAACATATA+AGG | + | chr7_4:58639544-58639563 | None:intergenic | 25.0% |
| ! | TGAAACCAATTCATTAACAA+GGG | + | chr7_4:58640016-58640035 | None:intergenic | 25.0% |
| ! | AAAATGCAGTCTTATCAACT+TGG | + | chr7_4:58637664-58637683 | None:intergenic | 30.0% |
| TAGAAATTGTACTAAGTGAC+AGG | - | chr7_4:58637792-58637811 | Msa1166550:intron | 30.0% | |
| AAGCCTGCTAATGATAAATT+AGG | + | chr7_4:58637901-58637920 | None:intergenic | 30.0% | |
| AGAAGACATAAAAGAAGCTT+TGG | - | chr7_4:58637930-58637949 | Msa1166550:intron | 30.0% | |
| AGTTTAATGATAAAGCAACG+TGG | - | chr7_4:58638104-58638123 | Msa1166550:intron | 30.0% | |
| GTTTAATGATAAAGCAACGT+GGG | - | chr7_4:58638105-58638124 | Msa1166550:intron | 30.0% | |
| TCAAATGTTGTTGAGCTATT+TGG | + | chr7_4:58638653-58638672 | None:intergenic | 30.0% | |
| !! | AACAATGTTTCTAGATTGCT+TGG | + | chr7_4:58638744-58638763 | None:intergenic | 30.0% |
| AGCTTGTATTGTATCTAACT+TGG | + | chr7_4:58638890-58638909 | None:intergenic | 30.0% | |
| ATGATGATATAAAGTGATGG+TGG | + | chr7_4:58639051-58639070 | None:intergenic | 30.0% | |
| ! | GTGATGATGATATAAAGTGA+TGG | + | chr7_4:58639054-58639073 | None:intergenic | 30.0% |
| TTCACTAAAAAACAGAGTTG+TGG | + | chr7_4:58639118-58639137 | None:intergenic | 30.0% | |
| AAATTCAAAACCATGGATTC+AGG | - | chr7_4:58639217-58639236 | Msa1166550:intron | 30.0% | |
| !!! | TGTTGTTCCTGAGTTTTTTT+GGG | - | chr7_4:58639578-58639597 | Msa1166550:intron | 30.0% |
| ATAAAGTCCCAAAAAAACTC+AGG | + | chr7_4:58639588-58639607 | None:intergenic | 30.0% | |
| !!! | TGAGTTTTTTTGGGACTTTA+TGG | - | chr7_4:58639587-58639606 | Msa1166550:intron | 30.0% |
| !!! | GAGTTTTTTTGGGACTTTAT+GGG | - | chr7_4:58639588-58639607 | Msa1166550:intron | 30.0% |
| ! | AATCCAATAACTACCTTTTG+AGG | - | chr7_4:58639693-58639712 | Msa1166550:CDS | 30.0% |
| ! | TGGTGTTCTAATTTTAGACT+TGG | - | chr7_4:58639717-58639736 | Msa1166550:CDS | 30.0% |
| ! | GGTGTTCTAATTTTAGACTT+GGG | - | chr7_4:58639718-58639737 | Msa1166550:CDS | 30.0% |
| ! | ATGGATTGTGATGAATCTAT+TGG | - | chr7_4:58639763-58639782 | Msa1166550:CDS | 30.0% |
| TTGAAATTACCTGGTATCAT+AGG | + | chr7_4:58639948-58639967 | None:intergenic | 30.0% | |
| ATGATACCAGGTAATTTCAA+TGG | - | chr7_4:58639948-58639967 | Msa1166550:CDS | 30.0% | |
| !!! | GTATATGTTTTGGTCTAACT+TGG | + | chr7_4:58639975-58639994 | None:intergenic | 30.0% |
| AGTTAGACCAAAACATATAC+TGG | - | chr7_4:58639975-58639994 | Msa1166550:CDS | 30.0% | |
| ATATACTGGTCCAAACTAAA+GGG | - | chr7_4:58639989-58640008 | Msa1166550:CDS | 30.0% | |
| GTGAAACCAATTCATTAACA+AGG | + | chr7_4:58640017-58640036 | None:intergenic | 30.0% | |
| ATTCTTCCTTGTAGCTTCTA+TGG | - | chr7_4:58637503-58637522 | Msa1166550:CDS | 35.0% | |
| ! | ATGGTGCTTTTCTGTTTCAT+TGG | - | chr7_4:58637522-58637541 | Msa1166550:CDS | 35.0% |
| ! | TGGTGCTTTTCTGTTTCATT+GGG | - | chr7_4:58637523-58637542 | Msa1166550:CDS | 35.0% |
| ! | TGTTTCATTGGGATTAGTGA+AGG | - | chr7_4:58637534-58637553 | Msa1166550:CDS | 35.0% |
| TACTAAGTGACAGGCATATA+TGG | - | chr7_4:58637801-58637820 | Msa1166550:intron | 35.0% | |
| ! | AGACATAAAAGAAGCTTTGG+AGG | - | chr7_4:58637933-58637952 | Msa1166550:intron | 35.0% |
| ! | ATGTGCTGATATACTCACAT+TGG | - | chr7_4:58637978-58637997 | Msa1166550:intron | 35.0% |
| !! | AGGTGCTGGAATATTGATTA+GGG | + | chr7_4:58638179-58638198 | None:intergenic | 35.0% |
| !! | AAGGTGCTGGAATATTGATT+AGG | + | chr7_4:58638180-58638199 | None:intergenic | 35.0% |
| AAAGCTTACTCTTCATGACT+TGG | - | chr7_4:58638240-58638259 | Msa1166550:intron | 35.0% | |
| !! | CATGACTTGGTTGTATTATC+AGG | - | chr7_4:58638253-58638272 | Msa1166550:intron | 35.0% |
| TCTGTGTCTTGAAATGTGAT+TGG | + | chr7_4:58638350-58638369 | None:intergenic | 35.0% | |
| ACATTTCAAGACACAGACAT+CGG | - | chr7_4:58638353-58638372 | Msa1166550:intron | 35.0% | |
| ! | TTTATAGGAGCACACACAAT+TGG | - | chr7_4:58638479-58638498 | Msa1166550:intron | 35.0% |
| ATTGCAACTTATTCAGCAAC+AGG | - | chr7_4:58638510-58638529 | Msa1166550:intron | 35.0% | |
| ! | CTTTTCAACTTCACTGGAAA+AGG | - | chr7_4:58638533-58638552 | Msa1166550:intron | 35.0% |
| TCCTGTACTTCTACAAAACA+AGG | - | chr7_4:58638685-58638704 | Msa1166550:intron | 35.0% | |
| CCTGTACTTCTACAAAACAA+GGG | - | chr7_4:58638686-58638705 | Msa1166550:intron | 35.0% | |
| TTGTATCTAACTTGGACATC+AGG | + | chr7_4:58638882-58638901 | None:intergenic | 35.0% | |
| ATGACAATAGTACTACTGTG+CGG | + | chr7_4:58638927-58638946 | None:intergenic | 35.0% | |
| ATGAATGTGTATGTGGTTGT+TGG | + | chr7_4:58639026-58639045 | None:intergenic | 35.0% | |
| AGGACAAGCAATTACAGATT+TGG | - | chr7_4:58639237-58639256 | Msa1166550:intron | 35.0% | |
| GGACAAGCAATTACAGATTT+GGG | - | chr7_4:58639238-58639257 | Msa1166550:intron | 35.0% | |
| !!! | GTGTTGTTCCTGAGTTTTTT+TGG | - | chr7_4:58639577-58639596 | Msa1166550:intron | 35.0% |
| CATCCTCAAAAGGTAGTTAT+TGG | + | chr7_4:58639699-58639718 | None:intergenic | 35.0% | |
| !! | CAATAACTACCTTTTGAGGA+TGG | - | chr7_4:58639697-58639716 | Msa1166550:CDS | 35.0% |
| ATTAGAACACCATCCTCAAA+AGG | + | chr7_4:58639709-58639728 | None:intergenic | 35.0% | |
| !!! | TAGACTTGGGTTGAGTTTTA+AGG | - | chr7_4:58639731-58639750 | Msa1166550:CDS | 35.0% |
| !!! | AGACTTGGGTTGAGTTTTAA+GGG | - | chr7_4:58639732-58639751 | Msa1166550:CDS | 35.0% |
| ATTGTGATGAATCTATTGGC+AGG | - | chr7_4:58639767-58639786 | Msa1166550:CDS | 35.0% | |
| TTGTGATGAATCTATTGGCA+GGG | - | chr7_4:58639768-58639787 | Msa1166550:CDS | 35.0% | |
| !! | TAGTGTGTTGTTGGCTTATA+GGG | - | chr7_4:58639894-58639913 | Msa1166550:intron | 35.0% |
| ! | GTTTGGACCAGTATATGTTT+TGG | + | chr7_4:58639985-58640004 | None:intergenic | 35.0% |
| CATATACTGGTCCAAACTAA+AGG | - | chr7_4:58639988-58640007 | Msa1166550:CDS | 35.0% | |
| ! | AGTTTTCTCAGTCAATGAAG+AGG | - | chr7_4:58640055-58640074 | Msa1166550:CDS | 35.0% |
| GTTCGAATGGAGAAATTAGA+AGG | - | chr7_4:58640103-58640122 | Msa1166550:CDS | 35.0% | |
| ! | AAAGCACCATAGAAGCTACA+AGG | + | chr7_4:58637512-58637531 | None:intergenic | 40.0% |
| ! | TTCATTGGGATTAGTGAAGG+AGG | - | chr7_4:58637537-58637556 | Msa1166550:CDS | 40.0% |
| TTAACAATCTCCTCAGCTTG+AGG | + | chr7_4:58637597-58637616 | None:intergenic | 40.0% | |
| CCTTGAAGAGACATGTTGTA+GGG | + | chr7_4:58637628-58637647 | None:intergenic | 40.0% | |
| GCATATATGGTTGCGTTTCA+GGG | - | chr7_4:58637814-58637833 | Msa1166550:intron | 40.0% | |
| CATATATGGTTGCGTTTCAG+GGG | - | chr7_4:58637815-58637834 | Msa1166550:intron | 40.0% | |
| TCAGCACATGATACAATTCC+TGG | + | chr7_4:58637967-58637986 | None:intergenic | 40.0% | |
| AATCAGGATGCTTCATGCAT+AGG | + | chr7_4:58638062-58638081 | None:intergenic | 40.0% | |
| AGCTGAGTGATGTTATGGAA+AGG | + | chr7_4:58638199-58638218 | None:intergenic | 40.0% | |
| ! | AACAGGCTTTTCAACTTCAC+TGG | - | chr7_4:58638527-58638546 | Msa1166550:intron | 40.0% |
| ! | GCATAAGTTGGATTCAGAGA+TGG | + | chr7_4:58638569-58638588 | None:intergenic | 40.0% |
| TTCTTGAAGACCAAATGCCA+AGG | - | chr7_4:58638593-58638612 | Msa1166550:intron | 40.0% | |
| !!! | CCCTTGTTTTGTAGAAGTAC+AGG | + | chr7_4:58638689-58638708 | None:intergenic | 40.0% |
| TAGTTTGGACAAGTGGATGT+TGG | - | chr7_4:58638777-58638796 | Msa1166550:intron | 40.0% | |
| AGTTTGGACAAGTGGATGTT+GGG | - | chr7_4:58638778-58638797 | Msa1166550:intron | 40.0% | |
| AACTTGGACCAGTTGAATTC+TGG | - | chr7_4:58638805-58638824 | Msa1166550:intron | 40.0% | |
| ATCAAAGGCCAGAATTCAAC+TGG | + | chr7_4:58638816-58638835 | None:intergenic | 40.0% | |
| AATTGCTTGTCCTGAATCCA+TGG | + | chr7_4:58639230-58639249 | None:intergenic | 40.0% | |
| ATGGCTTCCAAGTATAGCTT+TGG | - | chr7_4:58639384-58639403 | Msa1166550:CDS | 40.0% | |
| TATGTGCTTGAATCCAACCA+TGG | - | chr7_4:58639555-58639574 | Msa1166550:intron | 40.0% | |
| AAAACTCAGGAACAACACCA+TGG | + | chr7_4:58639575-58639594 | None:intergenic | 40.0% | |
| !! | ATGGTTTGCTAGTGTGTTGT+TGG | - | chr7_4:58639885-58639904 | Msa1166550:intron | 40.0% |
| !! | CTAGTGTGTTGTTGGCTTAT+AGG | - | chr7_4:58639893-58639912 | Msa1166550:intron | 40.0% |
| !! | TTGTTGGCTTATAGGGTGTA+TGG | - | chr7_4:58639901-58639920 | Msa1166550:intron | 40.0% |
| GCTTATAGGGTGTATGGTAT+GGG | - | chr7_4:58639907-58639926 | Msa1166550:intron | 40.0% | |
| GAAACACAACCTATGATACC+AGG | - | chr7_4:58639936-58639955 | Msa1166550:intron | 40.0% | |
| CTTGGACCATTGAAATTACC+TGG | + | chr7_4:58639957-58639976 | None:intergenic | 40.0% | |
| TAACAAGGGTCCCTTTAGTT+TGG | + | chr7_4:58640002-58640021 | None:intergenic | 40.0% | |
| AGGGACCCTTGTTAATGAAT+TGG | - | chr7_4:58640008-58640027 | Msa1166550:CDS | 40.0% | |
| TTCTCAGTCAATGAAGAGGA+TGG | - | chr7_4:58640059-58640078 | Msa1166550:CDS | 40.0% | |
| TCTCAGTCAATGAAGAGGAT+GGG | - | chr7_4:58640060-58640079 | Msa1166550:CDS | 40.0% | |
| CCCTACAACATGTCTCTTCA+AGG | - | chr7_4:58637625-58637644 | Msa1166550:intron | 45.0% | |
| GCCTTGAAGAGACATGTTGT+AGG | + | chr7_4:58637629-58637648 | None:intergenic | 45.0% | |
| ! | TGCAGTCTTATCAACTTGGC+TGG | + | chr7_4:58637660-58637679 | None:intergenic | 45.0% |
| GGCATATATGGTTGCGTTTC+AGG | - | chr7_4:58637813-58637832 | Msa1166550:intron | 45.0% | |
| GATTAGGGCTTCAATGCTTC+TGG | + | chr7_4:58638164-58638183 | None:intergenic | 45.0% | |
| ! | GTGATGTTATGGAAAGGTGC+TGG | + | chr7_4:58638193-58638212 | None:intergenic | 45.0% |
| GTCTGAGCTGAGTGATGTTA+TGG | + | chr7_4:58638204-58638223 | None:intergenic | 45.0% | |
| ATCCATCTCTACTGTTGTGG+TGG | + | chr7_4:58638630-58638649 | None:intergenic | 45.0% | |
| TGGATCCATCTCTACTGTTG+TGG | + | chr7_4:58638633-58638652 | None:intergenic | 45.0% | |
| GTTTGGACAAGTGGATGTTG+GGG | - | chr7_4:58638779-58638798 | Msa1166550:intron | 45.0% | |
| CTAACTTGGACATCAGGTAG+TGG | + | chr7_4:58638876-58638895 | None:intergenic | 45.0% | |
| CAATAGTACTACTGTGCGGA+CGG | + | chr7_4:58638923-58638942 | None:intergenic | 45.0% | |
| ! | GGTGGTGATGAATGTGTATG+TGG | + | chr7_4:58639033-58639052 | None:intergenic | 45.0% |
| !! | AGCGCTTGCTATGAAGAGAA+TGG | + | chr7_4:58639163-58639182 | None:intergenic | 45.0% |
| CTCTTCATAGCAAGCGCTAT+TGG | - | chr7_4:58639165-58639184 | Msa1166550:intron | 45.0% | |
| ! | CATAGCAAGCGCTATTGGTT+TGG | - | chr7_4:58639170-58639189 | Msa1166550:intron | 45.0% |
| !! | GCGCTATTGGTTTGGAATCA+TGG | - | chr7_4:58639178-58639197 | Msa1166550:intron | 45.0% |
| GTAGTGGCCAAAGCTATACT+TGG | + | chr7_4:58639394-58639413 | None:intergenic | 45.0% | |
| GAGAGAAGAGGAAAAGGTAG+TGG | + | chr7_4:58639410-58639429 | None:intergenic | 45.0% | |
| GACGATGAGAGAAGAGGAAA+AGG | + | chr7_4:58639416-58639435 | None:intergenic | 45.0% | |
| TTGAACGACGATGAGAGAAG+AGG | + | chr7_4:58639422-58639441 | None:intergenic | 45.0% | |
| ! | CAAGCGAGGGAAAGTTGATT+TGG | + | chr7_4:58639457-58639476 | None:intergenic | 45.0% |
| GTAGCAAACATCACAAGCGA+GGG | + | chr7_4:58639470-58639489 | None:intergenic | 45.0% | |
| TGTAGCAAACATCACAAGCG+AGG | + | chr7_4:58639471-58639490 | None:intergenic | 45.0% | |
| GGGACTTTATGGGTAAGTTC+TGG | - | chr7_4:58639598-58639617 | Msa1166550:intron | 45.0% | |
| !!! | GGGTTGAGTTTTAAGGGTGT+TGG | - | chr7_4:58639738-58639757 | Msa1166550:CDS | 45.0% |
| !!! | AGTTTTAAGGGTGTTGGCGA+TGG | - | chr7_4:58639744-58639763 | Msa1166550:CDS | 45.0% |
| GAATCTATTGGCAGGGTTGA+TGG | - | chr7_4:58639775-58639794 | Msa1166550:CDS | 45.0% | |
| GGCTTATAGGGTGTATGGTA+TGG | - | chr7_4:58639906-58639925 | Msa1166550:intron | 45.0% | |
| TTTCTCCATTCGAACCAGTG+AGG | + | chr7_4:58640098-58640117 | None:intergenic | 45.0% | |
| !! | ATTAATTAATATTATATCAA+AGG | + | chr7_4:58638831-58638850 | None:intergenic | 5.0% |
| GAAGTCATGTCCTCAAGCTG+AGG | - | chr7_4:58637584-58637603 | Msa1166550:CDS | 50.0% | |
| !!! | GTGTGACGCATCGGTTTTGT+TGG | - | chr7_4:58637837-58637856 | Msa1166550:intron | 50.0% |
| !! | GTTTTGTTGGAGTCCACTGC+TGG | - | chr7_4:58637850-58637869 | Msa1166550:intron | 50.0% |
| !! | GCTTTGGAGGAGAAATGTCC+AGG | - | chr7_4:58637946-58637965 | Msa1166550:intron | 50.0% |
| !! | AGCAACGTGGGAAGTGCTTA+CGG | - | chr7_4:58638117-58638136 | Msa1166550:intron | 50.0% |
| GTGCTTACGGGTAGAAGAGA+TGG | - | chr7_4:58638130-58638149 | Msa1166550:intron | 50.0% | |
| GGAGCACACACAATTGGAGT+AGG | - | chr7_4:58638485-58638504 | Msa1166550:intron | 50.0% | |
| GTCACTTAGGCCTTGGCATT+TGG | + | chr7_4:58638606-58638625 | None:intergenic | 50.0% | |
| !! | CTGTTGTGGTGGTGTCACTT+AGG | + | chr7_4:58638619-58638638 | None:intergenic | 50.0% |
| CACCACCACAACAGTAGAGA+TGG | - | chr7_4:58638625-58638644 | Msa1166550:intron | 50.0% | |
| GTGGATGTTGGGGTTCAACT+TGG | - | chr7_4:58638789-58638808 | Msa1166550:intron | 50.0% | |
| CTCAGGAACAACACCATGGT+TGG | + | chr7_4:58639571-58639590 | None:intergenic | 50.0% | |
| !! | AGGGTTGATGGTGAAGATGG+AGG | - | chr7_4:58639787-58639806 | Msa1166550:intron | 50.0% |
| GAAGAGGATGGGAGCTATTG+AGG | - | chr7_4:58640071-58640090 | Msa1166550:CDS | 50.0% | |
| TTAGTGAAGGAGGCAGCCTC+AGG | - | chr7_4:58637547-58637566 | Msa1166550:CDS | 55.0% | |
| ATCAACTTGGCTGGCAGCTC+AGG | + | chr7_4:58637651-58637670 | None:intergenic | 55.0% | |
| ! | GTTTCAGGGGTGTGACGCAT+CGG | - | chr7_4:58637828-58637847 | Msa1166550:intron | 55.0% |
| GTCCACTGCTGGTAACACTG+CGG | - | chr7_4:58637861-58637880 | Msa1166550:intron | 55.0% | |
| TGCTGGTAACACTGCGGAGA+AGG | - | chr7_4:58637867-58637886 | Msa1166550:intron | 55.0% | |
| !! | GCAACGTGGGAAGTGCTTAC+GGG | - | chr7_4:58638118-58638137 | Msa1166550:intron | 55.0% |
| !! | TGGTGGTGTCACTTAGGCCT+TGG | + | chr7_4:58638613-58638632 | None:intergenic | 55.0% |
| !! | GGCAGGGTTGATGGTGAAGA+TGG | - | chr7_4:58639784-58639803 | Msa1166550:CDS | 55.0% |
| GGAGCTATTGAGGTCCTCAC+TGG | - | chr7_4:58640081-58640100 | Msa1166550:CDS | 55.0% | |
| !! | GAGGTCCTCACTGGTTCGAA+TGG | - | chr7_4:58640090-58640109 | Msa1166550:CDS | 55.0% |
| CTCCGCAGTGTTACCAGCAG+TGG | + | chr7_4:58637866-58637885 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 58637492 | 58640146 | 58637492 | ID=Msa1166550;Name=Msa1166550 |
| chr7_4 | mRNA | 58637492 | 58640146 | 58637492 | ID=Msa1166550-mRNA-1;Parent=Msa1166550;Name=Msa1166550-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|0.6|0.5|6|0|335 |
| chr7_4 | exon | 58639937 | 58640146 | 58639937 | ID=Msa1166550-mRNA-1:exon:18047;Parent=Msa1166550-mRNA-1 |
| chr7_4 | exon | 58639624 | 58639803 | 58639624 | ID=Msa1166550-mRNA-1:exon:18046;Parent=Msa1166550-mRNA-1 |
| chr7_4 | exon | 58639364 | 58639532 | 58639364 | ID=Msa1166550-mRNA-1:exon:18045;Parent=Msa1166550-mRNA-1 |
| chr7_4 | exon | 58638950 | 58639152 | 58638950 | ID=Msa1166550-mRNA-1:exon:18044;Parent=Msa1166550-mRNA-1 |
| chr7_4 | exon | 58638823 | 58638931 | 58638823 | ID=Msa1166550-mRNA-1:exon:18043;Parent=Msa1166550-mRNA-1 |
| chr7_4 | exon | 58637492 | 58637628 | 58637492 | ID=Msa1166550-mRNA-1:exon:18042;Parent=Msa1166550-mRNA-1 |
| chr7_4 | CDS | 58639937 | 58640146 | 58639937 | ID=Msa1166550-mRNA-1:cds;Parent=Msa1166550-mRNA-1 |
| chr7_4 | CDS | 58639624 | 58639803 | 58639624 | ID=Msa1166550-mRNA-1:cds;Parent=Msa1166550-mRNA-1 |
| chr7_4 | CDS | 58639364 | 58639532 | 58639364 | ID=Msa1166550-mRNA-1:cds;Parent=Msa1166550-mRNA-1 |
| chr7_4 | CDS | 58638950 | 58639152 | 58638950 | ID=Msa1166550-mRNA-1:cds;Parent=Msa1166550-mRNA-1 |
| chr7_4 | CDS | 58638823 | 58638931 | 58638823 | ID=Msa1166550-mRNA-1:cds;Parent=Msa1166550-mRNA-1 |
| chr7_4 | CDS | 58637492 | 58637628 | 58637492 | ID=Msa1166550-mRNA-1:cds;Parent=Msa1166550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
