AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1166530


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1166530 MtrunA17_Chr7g0268501 97.812 320 7 0 1 320 1 320 0.0 653
Msa1166530 MtrunA17_Chr7g0268521 97.812 320 7 0 1 320 1 320 0.0 653
Msa1166530 MtrunA17_Chr4g0024121 53.211 327 145 5 1 320 1 326 1.58e-119 347
Msa1166530 MtrunA17_Chr2g0322861 52.280 329 144 6 1 320 62 386 7.10e-116 340
Msa1166530 MtrunA17_Chr8g0371381 46.580 307 152 5 19 320 20 319 4.66e-96 287
Msa1166530 MtrunA17_Chr5g0405991 47.319 317 149 8 12 320 10 316 5.08e-93 279
Msa1166530 MtrunA17_Chr1g0164891 50.000 300 142 5 29 320 93 392 6.04e-91 276
Msa1166530 MtrunA17_Chr1g0157051 45.079 315 163 5 11 319 7 317 1.13e-90 273
Msa1166530 MtrunA17_Chr3g0128061 45.938 320 167 5 6 320 8 326 1.58e-90 273
Msa1166530 MtrunA17_Chr1g0204011 44.089 313 168 5 11 320 14 322 3.06e-88 267
Msa1166530 MtrunA17_Chr2g0279041 45.752 306 155 4 22 320 24 325 4.86e-88 266
Msa1166530 MtrunA17_Chr2g0292211 44.860 321 168 5 6 320 24 341 3.84e-87 265
Msa1166530 MtrunA17_Chr2g0292241 44.037 327 170 5 7 320 4 330 6.63e-87 265
Msa1166530 MtrunA17_Chr1g0175561 43.614 321 173 6 8 320 6 326 6.20e-86 261
Msa1166530 MtrunA17_Chr7g0258811 43.519 324 175 6 4 320 49 371 1.24e-85 262
Msa1166530 MtrunA17_Chr4g0070951 42.901 324 172 5 5 320 11 329 3.12e-85 259
Msa1166530 MtrunA17_Chr5g0404721 45.659 311 164 4 15 320 20 330 2.19e-84 257
Msa1166530 MtrunA17_Chr2g0292261 44.062 320 173 4 7 320 11 330 2.98e-84 258
Msa1166530 MtrunA17_Chr5g0402581 45.110 317 166 6 11 320 11 326 3.72e-84 256
Msa1166530 MtrunA17_Chr2g0292251 45.277 307 162 4 20 320 23 329 3.80e-84 258
Msa1166530 MtrunA17_Chr2g0291751 42.679 321 178 4 6 320 10 330 5.87e-84 257
Msa1166530 MtrunA17_Chr2g0292271 44.795 317 167 5 12 320 14 330 9.80e-84 256
Msa1166530 MtrunA17_Chr2g0292181 41.390 331 182 5 2 320 9 339 1.28e-82 254
Msa1166530 MtrunA17_Chr4g0063671 39.939 328 179 5 1 320 3 320 5.82e-82 251
Msa1166530 MtrunA17_Chr6g0460711 42.902 317 173 5 7 320 3 314 7.01e-82 251
Msa1166530 MtrunA17_Chr8g0372601 44.551 312 168 4 14 320 19 330 1.12e-81 250
Msa1166530 MtrunA17_Chr2g0292111 43.125 320 176 4 7 320 11 330 3.24e-81 250
Msa1166530 MtrunA17_Chr5g0402571 43.218 317 172 7 11 320 11 326 3.72e-81 249
Msa1166530 MtrunA17_Chr1g0194151 43.226 310 168 4 19 320 24 333 3.42e-80 247
Msa1166530 MtrunA17_Chr6g0477071 40.373 322 177 9 3 320 32 342 4.69e-80 247
Msa1166530 MtrunA17_Chr1g0194271 40.413 339 183 5 1 320 2 340 7.07e-80 246
Msa1166530 MtrunA17_Chr1g0188431 41.433 321 174 6 3 320 18 327 7.46e-80 246
Msa1166530 MtrunA17_Chr2g0320071 40.683 322 178 5 3 320 5 317 1.18e-78 242
Msa1166530 MtrunA17_Chr2g0292151 42.812 320 177 4 7 320 11 330 1.65e-78 243
Msa1166530 MtrunA17_Chr2g0292091 42.188 320 178 5 8 320 6 325 5.34e-78 241
Msa1166530 MtrunA17_Chr7g0254201 41.806 299 165 5 25 320 20 312 1.40e-77 239
Msa1166530 MtrunA17_Chr7g0225221 41.667 324 178 6 2 320 3 320 1.48e-77 239
Msa1166530 MtrunA17_Chr3g0129051 42.173 313 168 5 10 316 13 318 1.64e-77 239
Msa1166530 MtrunA17_Chr2g0292101 42.679 321 177 5 7 320 6 326 4.63e-77 239
Msa1166530 MtrunA17_Chr1g0148021 44.582 323 168 8 6 320 9 328 1.27e-76 237
Msa1166530 MtrunA17_Chr4g0068621 44.262 305 161 6 22 320 35 336 1.18e-75 235
Msa1166530 MtrunA17_Chr2g0296621 43.243 296 158 5 28 320 53 341 3.52e-75 234
Msa1166530 MtrunA17_Chr2g0299691 41.590 327 174 7 8 320 35 358 4.02e-75 234
Msa1166530 MtrunA17_Chr8g0364291 41.806 299 168 4 28 320 26 324 5.40e-75 233
Msa1166530 MtrunA17_Chr4g0053871 43.425 327 170 8 2 319 3 323 6.04e-75 233
Msa1166530 MtrunA17_Chr2g0320101 39.623 318 181 4 7 320 7 317 1.06e-74 232
Msa1166530 MtrunA17_Chr4g0046131 41.914 303 167 6 25 318 42 344 2.78e-74 232
Msa1166530 MtrunA17_Chr3g0114451 40.367 327 179 6 1 320 1 318 3.84e-74 231
Msa1166530 MtrunA17_Chr7g0254231 40.532 301 167 5 23 320 20 311 4.34e-74 230
Msa1166530 MtrunA17_Chr1g0213061 40.379 317 174 6 11 320 13 321 5.21e-74 231
Msa1166530 MtrunA17_Chr2g0320091 40.125 319 179 5 7 320 7 318 6.82e-74 230
Msa1166530 MtrunA17_Chr5g0401431 41.284 327 182 7 2 319 3 328 1.07e-72 227
Msa1166530 MtrunA17_Chr2g0320061 39.812 319 180 4 7 320 7 318 1.79e-72 226
Msa1166530 MtrunA17_Chr2g0320051 40.125 319 179 4 7 320 7 318 4.34e-72 225
Msa1166530 MtrunA17_Chr2g0292291 41.558 308 173 5 20 320 25 332 5.62e-72 226
Msa1166530 MtrunA17_Chr4g0013721 40.328 305 175 5 20 320 95 396 2.02e-71 227
Msa1166530 MtrunA17_Chr4g0076211 42.712 295 158 6 30 320 46 333 4.38e-70 221
Msa1166530 MtrunA17_Chr4g0072091 42.574 303 164 5 25 320 24 323 6.57e-70 220
Msa1166530 MtrunA17_Chr2g0279061 45.946 259 129 4 69 320 12 266 7.46e-70 218
Msa1166530 MtrunA17_Chr4g0043391 38.838 327 183 6 2 320 7 324 9.76e-70 219
Msa1166530 MtrunA17_Chr5g0400331 42.484 306 166 5 25 320 26 331 1.94e-69 219
Msa1166530 MtrunA17_Chr1g0155611 42.715 302 167 4 25 320 46 347 2.00e-69 219
Msa1166530 MtrunA17_Chr2g0320031 39.198 324 182 7 3 320 5 319 2.35e-69 218
Msa1166530 MtrunA17_Chr7g0244461 38.339 313 181 5 12 320 8 312 2.70e-69 218
Msa1166530 MtrunA17_Chr5g0438021 38.650 326 186 6 1 320 8 325 1.35e-68 217
Msa1166530 MtrunA17_Chr5g0432441 39.077 325 177 8 10 320 9 326 2.37e-68 216
Msa1166530 MtrunA17_Chr5g0432331 41.212 330 175 8 1 320 32 352 5.05e-68 216
Msa1166530 MtrunA17_Chr3g0129061 40.256 313 174 5 10 316 13 318 5.74e-68 215
Msa1166530 MtrunA17_Chr1g0197411 38.602 329 187 8 5 320 4 330 7.14e-68 215
Msa1166530 MtrunA17_Chr2g0329641 39.474 304 172 5 25 320 36 335 1.79e-67 214
Msa1166530 MtrunA17_Chr4g0038171 39.739 307 165 5 25 320 24 321 6.32e-67 212
Msa1166530 MtrunA17_Chr4g0038161 37.994 329 184 6 3 320 1 320 8.48e-67 212
Msa1166530 MtrunA17_Chr3g0136751 40.923 325 179 6 2 320 5 322 1.25e-66 212
Msa1166530 MtrunA17_Chr4g0013821 38.000 300 179 5 25 320 28 324 2.52e-66 211
Msa1166530 MtrunA17_Chr4g0038151 37.576 330 185 7 3 320 1 321 3.15e-66 211
Msa1166530 MtrunA17_Chr7g0244451 37.654 324 190 5 1 320 1 316 4.77e-66 210
Msa1166530 MtrunA17_Chr5g0432351 40.000 330 179 9 1 320 1 321 5.36e-66 210
Msa1166530 MtrunA17_Chr4g0013191 37.941 340 178 7 7 320 8 340 6.41e-66 210
Msa1166530 MtrunA17_Chr3g0129041 40.694 317 175 5 10 320 13 322 1.30e-65 209
Msa1166530 MtrunA17_Chr3g0106901 39.062 320 181 5 5 320 14 323 1.54e-65 209
Msa1166530 MtrunA17_Chr4g0013171 38.944 303 172 6 24 320 26 321 2.81e-65 208
Msa1166530 MtrunA17_Chr4g0013181 39.465 299 168 6 28 320 62 353 2.99e-65 209
Msa1166530 MtrunA17_Chr7g0224371 37.730 326 187 6 1 320 7 322 3.21e-65 208
Msa1166530 MtrunA17_Chr3g0106921 37.500 320 185 7 8 320 9 320 5.32e-65 207
Msa1166530 MtrunA17_Chr5g0432341 39.759 332 177 10 1 320 1 321 2.92e-64 206
Msa1166530 MtrunA17_Chr2g0316481 36.119 335 177 6 19 317 70 403 6.66e-64 207
Msa1166530 MtrunA17_Chr4g0013201 38.667 300 173 4 25 320 46 338 1.60e-63 204
Msa1166530 MtrunA17_Chr2g0316791 35.928 334 179 5 19 317 70 403 5.78e-63 205
Msa1166530 MtrunA17_Chr2g0316831 36.119 335 177 6 19 317 106 439 7.08e-63 206
Msa1166530 MtrunA17_Chr6g0467251 36.728 324 187 9 6 320 14 328 8.64e-63 202
Msa1166530 MtrunA17_Chr2g0278671 40.328 305 168 6 25 320 24 323 1.26e-62 201
Msa1166530 MtrunA17_Chr3g0107881 38.154 325 183 8 5 320 9 324 1.58e-62 201
Msa1166530 MtrunA17_Chr2g0316191 35.224 335 181 5 19 317 70 404 3.85e-62 202
Msa1166530 MtrunA17_Chr6g0467161 37.003 327 185 8 6 320 19 336 3.94e-62 201
Msa1166530 MtrunA17_Chr6g0467121 37.576 330 180 10 5 320 46 363 3.57e-61 199
Msa1166530 MtrunA17_Chr6g0451571 37.963 324 187 9 5 320 17 334 1.38e-60 196
Msa1166530 MtrunA17_Chr2g0311251 36.012 336 179 7 19 319 5 339 4.90e-60 195
Msa1166530 MtrunA17_Chr2g0311241 32.891 377 176 6 19 319 54 429 4.07e-59 195
Msa1166530 MtrunA17_Chr5g0413051 36.218 312 184 8 21 320 69 377 4.65e-59 194
Msa1166530 MtrunA17_Chr4g0075241 35.294 306 189 6 21 320 25 327 8.54e-57 186
Msa1166530 MtrunA17_Chr5g0421411 37.102 283 165 9 49 320 5 285 2.87e-55 181
Msa1166530 MtrunA17_Chr1g0181431 35.463 313 180 8 18 320 23 323 6.97e-55 181
Msa1166530 MtrunA17_Chr1g0181511 35.762 302 183 4 25 320 27 323 1.12e-54 181
Msa1166530 MtrunA17_Chr4g0074851 35.802 324 185 8 5 320 20 328 1.55e-54 181
Msa1166530 MtrunA17_Chr1g0181481 34.641 306 181 7 25 320 27 323 4.12e-52 174
Msa1166530 MtrunA17_Chr7g0268491 91.765 85 7 0 236 320 13 97 3.82e-49 159
Msa1166530 MtrunA17_Chr4g0004591 32.492 317 154 4 25 319 77 355 1.02e-47 164
Msa1166530 MtrunA17_Chr2g0316811 38.428 229 122 3 19 228 44 272 5.12e-46 159
Msa1166530 MtrunA17_Chr5g0432401 33.945 327 156 9 4 319 8 285 5.11e-44 152
Msa1166530 MtrunA17_Chr2g0292281 42.381 210 106 5 116 320 17 216 1.81e-41 144
Msa1166530 MtrunA17_Chr2g0316141 32.155 283 138 6 71 317 11 275 1.58e-37 135
Msa1166530 MtrunA17_Chr2g0316181 32.155 283 138 6 71 317 11 275 1.58e-37 135
Msa1166530 MtrunA17_Chr3g0114461 36.702 188 110 3 135 320 12 192 2.42e-32 119
Msa1166530 MtrunA17_Chr3g0114491 49.533 107 53 1 25 130 18 124 9.45e-29 107
Msa1166530 MtrunA17_Chr1g0196191 73.438 64 17 0 67 130 27 90 1.07e-24 97.8
Msa1166530 MtrunA17_Chr6g0468731 64.179 67 21 1 64 130 22 85 3.25e-23 91.7
Msa1166530 MtrunA17_Chr1g0181491 38.053 113 69 1 17 129 4 115 2.52e-21 88.6
Msa1166530 MtrunA17_Chr1g0181501 30.526 190 122 4 135 320 6 189 3.73e-19 84.0
Msa1166530 MtrunA17_Chr7g0254181 37.313 134 71 4 84 207 19 149 8.88e-18 79.0
Msa1166530 MtrunA17_Chr5g0432321 35.484 124 72 2 143 266 17 132 9.39e-16 72.8
Msa1166530 MtrunA17_Chr2g0316771 24.444 180 103 4 170 317 5 183 7.68e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1166530 AT1G05260.1 55.000 320 136 5 8 320 7 325 2.43e-120 349
Msa1166530 AT4G11290.1 53.750 320 141 5 7 320 8 326 6.55e-116 338
Msa1166530 AT1G05240.1 51.505 299 137 4 28 320 29 325 1.30e-108 319
Msa1166530 AT1G05250.1 51.505 299 137 4 28 320 29 325 1.30e-108 319
Msa1166530 AT2G39040.1 51.466 307 140 4 23 320 44 350 2.47e-107 317
Msa1166530 AT3G21770.1 51.447 311 143 5 16 319 18 327 4.75e-107 315
Msa1166530 AT5G15180.1 52.333 300 137 4 25 320 32 329 4.63e-106 313
Msa1166530 AT3G01190.1 51.090 321 149 5 4 320 5 321 4.98e-106 313
Msa1166530 AT5G42180.1 44.062 320 172 4 3 319 1 316 1.24e-91 276
Msa1166530 AT5G64120.1 45.638 298 154 5 26 320 36 328 1.51e-86 263
Msa1166530 AT5G17820.1 42.056 321 174 5 3 320 2 313 1.26e-85 260
Msa1166530 AT5G17820.2 42.056 321 174 5 3 320 55 366 3.90e-84 258
Msa1166530 AT5G06720.1 42.547 322 179 4 5 320 12 333 4.07e-84 257
Msa1166530 AT2G24800.1 48.845 303 144 6 25 320 31 329 4.89e-84 257
Msa1166530 AT5G51890.1 45.098 306 153 7 23 320 24 322 6.28e-84 256
Msa1166530 AT2G18150.1 43.564 303 166 4 23 320 34 336 1.25e-82 253
Msa1166530 AT5G66390.1 44.409 313 167 5 14 320 22 333 1.59e-82 253
Msa1166530 AT2G41480.1 40.798 326 180 5 4 320 7 328 1.64e-82 253
Msa1166530 AT4G31760.1 44.620 316 165 5 11 320 15 326 4.43e-82 251
Msa1166530 AT5G06730.1 42.547 322 179 4 5 320 13 334 8.84e-82 252
Msa1166530 AT4G36430.1 42.038 314 177 4 12 320 17 330 8.88e-82 251
Msa1166530 AT3G03670.1 40.123 324 187 4 1 320 1 321 1.66e-81 250
Msa1166530 AT2G18140.1 42.345 307 169 5 22 320 29 335 2.65e-81 250
Msa1166530 AT5G39580.1 41.304 322 179 7 3 320 4 319 1.67e-80 247
Msa1166530 AT5G19890.1 42.857 315 166 6 14 320 19 327 4.87e-80 246
Msa1166530 AT4G33420.1 42.006 319 169 7 8 320 17 325 1.15e-79 245
Msa1166530 AT5G14130.1 44.444 324 168 9 3 320 13 330 2.09e-79 245
Msa1166530 AT5G64100.1 43.144 299 157 5 28 320 40 331 5.24e-79 244
Msa1166530 AT2G38380.1 42.547 322 176 6 8 320 12 333 5.60e-79 244
Msa1166530 AT5G14130.2 44.444 324 168 9 3 320 54 371 6.89e-79 245
Msa1166530 AT4G33420.2 42.006 319 169 7 8 320 64 372 7.40e-79 245
Msa1166530 AT2G38390.1 41.925 322 178 6 8 320 12 333 2.05e-78 243
Msa1166530 AT5G67400.1 42.683 328 176 7 4 320 3 329 3.05e-77 239
Msa1166530 AT4G37530.1 43.421 304 163 6 25 320 27 329 3.26e-77 239
Msa1166530 AT5G19880.1 42.308 312 171 6 18 320 18 329 4.51e-77 239
Msa1166530 AT1G71695.1 43.894 303 156 8 25 320 44 339 7.64e-77 239
Msa1166530 AT2G18980.1 43.344 323 170 6 5 320 7 323 8.38e-77 238
Msa1166530 AT4G37520.2 43.709 302 162 6 25 320 27 326 1.35e-76 238
Msa1166530 AT4G37520.1 43.421 304 163 6 25 320 27 329 1.57e-76 238
Msa1166530 AT4G26010.1 39.937 318 175 6 7 320 4 309 1.92e-76 237
Msa1166530 AT4G26010.2 39.937 318 175 6 7 320 32 337 3.64e-76 237
Msa1166530 AT1G44970.1 44.516 310 166 4 17 320 37 346 6.11e-76 236
Msa1166530 AT3G49960.1 44.408 304 160 6 25 320 27 329 7.85e-76 236
Msa1166530 AT3G32980.1 41.433 321 176 6 11 320 15 334 1.83e-75 236
Msa1166530 AT5G64110.1 42.193 301 163 4 26 320 35 330 3.23e-75 234
Msa1166530 AT3G50990.1 42.157 306 172 3 20 320 36 341 3.82e-75 234
Msa1166530 AT4G08770.1 41.176 306 172 5 23 320 22 327 7.42e-75 234
Msa1166530 AT4G30170.1 42.574 303 163 5 25 320 27 325 5.16e-74 231
Msa1166530 AT4G25980.1 41.214 313 172 6 16 320 18 326 2.19e-72 227
Msa1166530 AT1G14550.1 40.789 304 164 6 25 320 26 321 3.77e-72 226
Msa1166530 AT2G35380.1 43.366 309 165 5 22 320 27 335 1.04e-71 225
Msa1166530 AT5G22410.1 38.486 317 182 6 7 316 11 321 1.13e-71 225
Msa1166530 AT1G49570.1 42.333 300 166 5 24 316 47 346 1.76e-71 225
Msa1166530 AT3G49120.1 39.935 308 177 4 21 320 28 335 1.49e-70 223
Msa1166530 AT3G49110.1 39.869 306 176 4 23 320 31 336 1.65e-70 223
Msa1166530 AT4G08780.1 40.132 304 174 4 25 320 24 327 1.94e-70 223
Msa1166530 AT1G77100.1 40.461 304 165 6 25 320 24 319 2.92e-70 221
Msa1166530 AT4G33870.1 36.812 345 177 6 14 317 54 398 4.96e-69 221
Msa1166530 AT5G05340.1 39.073 302 171 5 25 320 30 324 1.19e-68 217
Msa1166530 AT2G22420.1 38.944 303 178 5 22 320 20 319 1.21e-68 217
Msa1166530 AT1G14540.1 38.154 325 186 5 1 320 1 315 2.72e-68 216
Msa1166530 AT3G28200.1 40.728 302 167 5 25 320 21 316 9.81e-68 214
Msa1166530 AT1G34510.1 37.421 318 183 6 7 320 4 309 2.64e-67 213
Msa1166530 AT4G17690.1 39.803 304 170 6 24 320 25 322 3.50e-67 213
Msa1166530 AT4G37530.2 44.922 256 133 5 23 271 25 279 8.54e-67 211
Msa1166530 AT4G16270.1 40.067 297 171 5 29 320 54 348 3.19e-65 209
Msa1166530 AT5G40150.1 40.264 303 168 6 25 320 32 328 5.45e-65 208
Msa1166530 AT1G68850.1 38.024 334 183 10 5 320 8 335 3.74e-64 206
Msa1166530 AT5G47000.1 36.137 321 190 6 11 320 14 330 6.53e-64 205
Msa1166530 AT2G34060.1 39.934 303 173 6 25 318 42 344 1.11e-63 205
Msa1166530 AT5G24070.1 37.061 313 182 6 18 320 28 335 7.00e-63 203
Msa1166530 AT1G30870.1 38.538 301 168 7 28 320 54 345 9.17e-63 203
Msa1166530 AT2G43480.1 36.709 316 182 7 18 320 25 335 8.63e-61 197
Msa1166530 AT5G58390.1 36.875 320 188 6 8 320 4 316 5.78e-60 194
Msa1166530 AT5G58400.1 37.304 319 181 8 9 316 11 321 3.75e-59 193
Msa1166530 AT1G24110.1 37.346 324 185 7 5 320 9 322 2.15e-58 191
Msa1166530 AT4G21960.1 35.583 326 194 6 6 320 7 327 7.02e-56 184
Msa1166530 AT3G17070.1 34.451 328 198 9 6 320 16 339 1.58e-52 176
Msa1166530 AT2G37130.1 34.951 309 181 8 23 320 28 327 2.42e-51 172
Msa1166530 AT2G37130.2 34.868 304 178 8 28 320 2 296 2.11e-50 169
Msa1166530 AT2G35380.2 39.592 245 138 4 86 320 3 247 8.46e-47 158
Msa1166530 AT5G39580.2 42.632 190 102 4 3 190 4 188 2.39e-45 154
Msa1166530 AT4G25980.2 47.159 176 87 4 16 189 63 234 8.45e-44 152
Msa1166530 AT2G24800.2 50.909 165 76 2 25 187 31 192 9.56e-44 150
Msa1166530 AT3G17070.2 33.333 264 161 9 67 320 18 276 2.24e-35 129

Find 60 sgRNAs with CRISPR-Local

Find 188 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATTCATTAACAATGTTTC+TGG 0.127160 7_4:-58625804 None:intergenic
TCAAATGTTGTTGAGCTATT+TGG 0.173041 7_4:-58625704 None:intergenic
CATGACTTGGTTGTATTATC+AGG 0.226559 7_4:+58625236 Msa1166530:CDS
ATTCTTCCTTGTAGCTTCTA+TGG 0.251513 7_4:+58624493 Msa1166530:CDS
GTCTGAGCTGTGTGATATTA+TGG 0.266226 7_4:-58625184 None:intergenic
AGTTTAAGAATAAACCAAAT+TGG 0.267577 7_4:+58625087 Msa1166530:intron
CCCGTAAGCACTTCCCAATT+TGG 0.267771 7_4:-58625101 None:intergenic
AAGCCTGCTAATGATAAATT+AGG 0.273981 7_4:-58624880 None:intergenic
CAGAAACATTGTTAATGAAT+TGG 0.289764 7_4:+58625805 Msa1166530:CDS
GTCACTTAGGCCTTGGCATT+TGG 0.297824 7_4:-58625657 None:intergenic
TTCAAGAAATTTGCATAAGT+TGG 0.318870 7_4:-58625632 None:intergenic
ATCAACTTGGCTGGCAGCTC+AGG 0.326426 7_4:-58624638 None:intergenic
ACCAAATTGGGAAGTGCTTA+CGG 0.361617 7_4:+58625100 Msa1166530:CDS
TCAGCACATGATACAATTCC+TGG 0.383508 7_4:-58624946 None:intergenic
GTTTGAATGGAGAAATTAGA+AGG 0.402528 7_4:+58625900 Msa1166530:CDS
CCCTACAACATGTCTCTTCA+AGG 0.409923 7_4:+58624615 Msa1166530:CDS
TTTATAGGAGCACACACAAT+TGG 0.421672 7_4:+58625533 Msa1166530:intron
ATTGCAACTTATTCAGCAAC+AGG 0.429672 7_4:+58625564 Msa1166530:CDS
CCAAATTGGGAAGTGCTTAC+GGG 0.431778 7_4:+58625101 Msa1166530:CDS
ATTCCTAATTTATCATTAGC+AGG 0.434054 7_4:+58624877 Msa1166530:CDS
GTTTAAGAATAAACCAAATT+GGG 0.443819 7_4:+58625088 Msa1166530:intron
GAGGTCCTCACTGGTTTGAA+TGG 0.449923 7_4:+58625887 Msa1166530:CDS
TTAGTGAAGGAGGCAGCCTC+AGG 0.457227 7_4:+58624537 Msa1166530:CDS
AAGGTGCTGGAATATTGATC+AGG 0.461887 7_4:-58625160 None:intergenic
AACAATGTTTCTGGATTGCT+TGG 0.462159 7_4:-58625795 None:intergenic
TGGTGGTGTCACTTAGGCCT+TGG 0.470093 7_4:-58625664 None:intergenic
AAAGCTTACTCTTCATGACT+TGG 0.493798 7_4:+58625223 Msa1166530:CDS
CTGTTGTGGTGGTGTCACTT+AGG 0.496811 7_4:-58625670 None:intergenic
GAAGAGGATGGGAGCTATTG+AGG 0.498561 7_4:+58625868 Msa1166530:CDS
TGCAGTCTTATCAACTTGGC+TGG 0.499023 7_4:-58624647 None:intergenic
GGAGCTATTGAGGTCCTCAC+TGG 0.501455 7_4:+58625878 Msa1166530:CDS
CTCCGCAGTGTTACCAGCAG+TGG 0.514254 7_4:-58624845 None:intergenic
TTCTCAGTCAATGAAGAGGA+TGG 0.515611 7_4:+58625856 Msa1166530:CDS
GCATAAGTTGGATTCAGAGA+TGG 0.521194 7_4:-58625620 None:intergenic
ATTTCAGGGGTGTGACGCAT+CGG 0.528033 7_4:+58624810 Msa1166530:intron
TGTTTCATTGGGATTAGTGA+AGG 0.528117 7_4:+58624524 Msa1166530:CDS
TGGATCCATCTCTACTGTTG+TGG 0.535692 7_4:-58625684 None:intergenic
TCCTGTACTTCTACAAAACA+AGG 0.536222 7_4:+58625739 Msa1166530:CDS
CACCACCACAACAGTAGAGA+TGG 0.539448 7_4:+58625679 Msa1166530:CDS
TTAACAATCTCCTCAGCTTG+AGG 0.546103 7_4:-58624584 None:intergenic
AAAATGCAGTCTTATCAACT+TGG 0.547582 7_4:-58624651 None:intergenic
CCTTGAAGAGACATGTTGTA+GGG 0.548319 7_4:-58624615 None:intergenic
GCCTTGAAGAGACATGTTGT+AGG 0.550855 7_4:-58624616 None:intergenic
CTTCATTGACTGAGAAAACT+CGG 0.554984 7_4:-58625849 None:intergenic
GTGATATTATGGAAAGGTGC+TGG 0.567497 7_4:-58625173 None:intergenic
ATCCATCTCTACTGTTGTGG+TGG 0.572153 7_4:-58625681 None:intergenic
TCTCAGTCAATGAAGAGGAT+GGG 0.577113 7_4:+58625857 Msa1166530:CDS
TGCTAATGATAAATTAGGAA+TGG 0.579765 7_4:-58624875 None:intergenic
GTGCTTACGGGTAGAAGAGA+TGG 0.590073 7_4:+58625113 Msa1166530:CDS
TTCTTGAAGACCAAATGCCA+AGG 0.601738 7_4:+58625647 Msa1166530:CDS
AAAGCACCATAGAAGCTACA+AGG 0.611637 7_4:-58624499 None:intergenic
TTCATTGGGATTAGTGAAGG+AGG 0.626140 7_4:+58624527 Msa1166530:CDS
AGGTGCTGGAATATTGATCA+GGG 0.633257 7_4:-58625159 None:intergenic
GGAGCACACACAATTGGAGT+AGG 0.649757 7_4:+58625539 Msa1166530:intron
GAAGTCATGTCCTCAAGCTG+AGG 0.657533 7_4:+58624574 Msa1166530:CDS
ATGTGCTGATATACTCACAT+TGG 0.669867 7_4:+58624960 Msa1166530:CDS
CCTGTACTTCTACAAAACAA+GGG 0.691319 7_4:+58625740 Msa1166530:CDS
AGCTGTGTGATATTATGGAA+AGG 0.714907 7_4:-58625179 None:intergenic
TTTCTCCATTCAAACCAGTG+AGG 0.718240 7_4:-58625892 None:intergenic
GTCCACTGCTGGTAACACTG+CGG 0.786302 7_4:+58624843 Msa1166530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGAATATGTATAAATTAA+TGG - chr7_4:58625025-58625044 None:intergenic 10.0%
!! TAAGAATATGTATAAATTAA+TGG - chr7_4:58625025-58625044 None:intergenic 10.0%
!! TAAATATGAATGAATAAATC+AGG - chr7_4:58625060-58625079 None:intergenic 15.0%
!! TAAATATGAATGAATAAATC+AGG - chr7_4:58625060-58625079 None:intergenic 15.0%
!! AGTTTAAGAATAAACCAAAT+TGG + chr7_4:58625087-58625106 Msa1166530:intron 20.0%
!! GTTTAAGAATAAACCAAATT+GGG + chr7_4:58625088-58625107 Msa1166530:intron 20.0%
!! TATAAATTGGTTAATTAGCA+TGG - chr7_4:58625356-58625375 None:intergenic 20.0%
!! AACTAGTTAAATTAACATGT+TGG + chr7_4:58625501-58625520 Msa1166530:intron 20.0%
!! AGTTTAAGAATAAACCAAAT+TGG + chr7_4:58625087-58625106 Msa1166530:intron 20.0%
!! GTTTAAGAATAAACCAAATT+GGG + chr7_4:58625088-58625107 Msa1166530:intron 20.0%
!! TATAAATTGGTTAATTAGCA+TGG - chr7_4:58625356-58625375 None:intergenic 20.0%
!! AACTAGTTAAATTAACATGT+TGG + chr7_4:58625501-58625520 Msa1166530:intron 20.0%
! TCTTATAAAAATTCTTCCTG+AGG - chr7_4:58624556-58624575 None:intergenic 25.0%
!!! ATTTTCATGACTGTTTTGTT+AGG + chr7_4:58624669-58624688 Msa1166530:CDS 25.0%
!!! TTTTCATGACTGTTTTGTTA+GGG + chr7_4:58624670-58624689 Msa1166530:CDS 25.0%
! CTAAAATTGTAAAGATCAAG+GGG - chr7_4:58624702-58624721 None:intergenic 25.0%
! GCTAAAATTGTAAAGATCAA+GGG - chr7_4:58624703-58624722 None:intergenic 25.0%
! AGCTAAAATTGTAAAGATCA+AGG - chr7_4:58624704-58624723 None:intergenic 25.0%
! TGCTAATGATAAATTAGGAA+TGG - chr7_4:58624878-58624897 None:intergenic 25.0%
! ATTCCTAATTTATCATTAGC+AGG + chr7_4:58624877-58624896 Msa1166530:CDS 25.0%
! AGAAGACATAAAAAAAGCTT+TGG + chr7_4:58624912-58624931 Msa1166530:CDS 25.0%
!!! AGACTATATTTTAAGTAGCT+TGG - chr7_4:58625330-58625349 None:intergenic 25.0%
! CCAATTTATATTAAGTAGCA+CGG + chr7_4:58625366-58625385 Msa1166530:intron 25.0%
!! GTAATGAGTTGAGAAAATAT+AGG + chr7_4:58625434-58625453 Msa1166530:intron 25.0%
!! TGTTGGCTATATGTATTTAT+AGG + chr7_4:58625518-58625537 Msa1166530:intron 25.0%
! TTCAAGAAATTTGCATAAGT+TGG - chr7_4:58625635-58625654 None:intergenic 25.0%
! CAATTCATTAACAATGTTTC+TGG - chr7_4:58625807-58625826 None:intergenic 25.0%
! CAGAAACATTGTTAATGAAT+TGG + chr7_4:58625805-58625824 Msa1166530:CDS 25.0%
! TCTTATAAAAATTCTTCCTG+AGG - chr7_4:58624556-58624575 None:intergenic 25.0%
!!! ATTTTCATGACTGTTTTGTT+AGG + chr7_4:58624669-58624688 Msa1166530:CDS 25.0%
!!! TTTTCATGACTGTTTTGTTA+GGG + chr7_4:58624670-58624689 Msa1166530:CDS 25.0%
! CTAAAATTGTAAAGATCAAG+GGG - chr7_4:58624702-58624721 None:intergenic 25.0%
! GCTAAAATTGTAAAGATCAA+GGG - chr7_4:58624703-58624722 None:intergenic 25.0%
! AGCTAAAATTGTAAAGATCA+AGG - chr7_4:58624704-58624723 None:intergenic 25.0%
! TGCTAATGATAAATTAGGAA+TGG - chr7_4:58624878-58624897 None:intergenic 25.0%
! ATTCCTAATTTATCATTAGC+AGG + chr7_4:58624877-58624896 Msa1166530:CDS 25.0%
! AGAAGACATAAAAAAAGCTT+TGG + chr7_4:58624912-58624931 Msa1166530:CDS 25.0%
!!! AGACTATATTTTAAGTAGCT+TGG - chr7_4:58625330-58625349 None:intergenic 25.0%
! CCAATTTATATTAAGTAGCA+CGG + chr7_4:58625366-58625385 Msa1166530:intron 25.0%
!! GTAATGAGTTGAGAAAATAT+AGG + chr7_4:58625434-58625453 Msa1166530:intron 25.0%
!! TGTTGGCTATATGTATTTAT+AGG + chr7_4:58625518-58625537 Msa1166530:intron 25.0%
! TTCAAGAAATTTGCATAAGT+TGG - chr7_4:58625635-58625654 None:intergenic 25.0%
! CAATTCATTAACAATGTTTC+TGG - chr7_4:58625807-58625826 None:intergenic 25.0%
! CAGAAACATTGTTAATGAAT+TGG + chr7_4:58625805-58625824 Msa1166530:CDS 25.0%
! AAAATGCAGTCTTATCAACT+TGG - chr7_4:58624654-58624673 None:intergenic 30.0%
ATATCTATGGTTGCATTTCA+GGG + chr7_4:58624796-58624815 Msa1166530:intron 30.0%
AAGCCTGCTAATGATAAATT+AGG - chr7_4:58624883-58624902 None:intergenic 30.0%
! AGACATAAAAAAAGCTTTGG+AGG + chr7_4:58624915-58624934 Msa1166530:CDS 30.0%
!! CCGTGCTACTTAATATAAAT+TGG - chr7_4:58625369-58625388 None:intergenic 30.0%
TCAAATGTTGTTGAGCTATT+TGG - chr7_4:58625707-58625726 None:intergenic 30.0%
GTTTGAATGGAGAAATTAGA+AGG + chr7_4:58625900-58625919 Msa1166530:CDS 30.0%
! AAAATGCAGTCTTATCAACT+TGG - chr7_4:58624654-58624673 None:intergenic 30.0%
ATATCTATGGTTGCATTTCA+GGG + chr7_4:58624796-58624815 Msa1166530:intron 30.0%
AAGCCTGCTAATGATAAATT+AGG - chr7_4:58624883-58624902 None:intergenic 30.0%
! AGACATAAAAAAAGCTTTGG+AGG + chr7_4:58624915-58624934 Msa1166530:CDS 30.0%
!! CCGTGCTACTTAATATAAAT+TGG - chr7_4:58625369-58625388 None:intergenic 30.0%
TCAAATGTTGTTGAGCTATT+TGG - chr7_4:58625707-58625726 None:intergenic 30.0%
GTTTGAATGGAGAAATTAGA+AGG + chr7_4:58625900-58625919 Msa1166530:CDS 30.0%
ATTCTTCCTTGTAGCTTCTA+TGG + chr7_4:58624493-58624512 Msa1166530:CDS 35.0%
! ATGGTGCTTTTCTGTTTCAT+TGG + chr7_4:58624512-58624531 Msa1166530:CDS 35.0%
! TGGTGCTTTTCTGTTTCATT+GGG + chr7_4:58624513-58624532 Msa1166530:CDS 35.0%
! TGTTTCATTGGGATTAGTGA+AGG + chr7_4:58624524-58624543 Msa1166530:CDS 35.0%
CTAAGTGACATGCATATCTA+TGG + chr7_4:58624783-58624802 Msa1166530:intron 35.0%
CATATCTATGGTTGCATTTC+AGG + chr7_4:58624795-58624814 Msa1166530:intron 35.0%
TATCTATGGTTGCATTTCAG+GGG + chr7_4:58624797-58624816 Msa1166530:intron 35.0%
! ATGTGCTGATATACTCACAT+TGG + chr7_4:58624960-58624979 Msa1166530:CDS 35.0%
AGCTGTGTGATATTATGGAA+AGG - chr7_4:58625182-58625201 None:intergenic 35.0%
AAAGCTTACTCTTCATGACT+TGG + chr7_4:58625223-58625242 Msa1166530:CDS 35.0%
!! CATGACTTGGTTGTATTATC+AGG + chr7_4:58625236-58625255 Msa1166530:CDS 35.0%
TTGTATATGACCACATGTGT+CGG + chr7_4:58625460-58625479 Msa1166530:intron 35.0%
! TTTATAGGAGCACACACAAT+TGG + chr7_4:58625533-58625552 Msa1166530:intron 35.0%
ATTGCAACTTATTCAGCAAC+AGG + chr7_4:58625564-58625583 Msa1166530:CDS 35.0%
! CTTTTCAACTTCACTGGAAA+AGG + chr7_4:58625587-58625606 Msa1166530:CDS 35.0%
TCCTGTACTTCTACAAAACA+AGG + chr7_4:58625739-58625758 Msa1166530:CDS 35.0%
CCTGTACTTCTACAAAACAA+GGG + chr7_4:58625740-58625759 Msa1166530:CDS 35.0%
!! AACAATGTTTCTGGATTGCT+TGG - chr7_4:58625798-58625817 None:intergenic 35.0%
! CTTCATTGACTGAGAAAACT+CGG - chr7_4:58625852-58625871 None:intergenic 35.0%
! AGTTTTCTCAGTCAATGAAG+AGG + chr7_4:58625852-58625871 Msa1166530:CDS 35.0%
ATTCTTCCTTGTAGCTTCTA+TGG + chr7_4:58624493-58624512 Msa1166530:CDS 35.0%
! ATGGTGCTTTTCTGTTTCAT+TGG + chr7_4:58624512-58624531 Msa1166530:CDS 35.0%
! TGGTGCTTTTCTGTTTCATT+GGG + chr7_4:58624513-58624532 Msa1166530:CDS 35.0%
! TGTTTCATTGGGATTAGTGA+AGG + chr7_4:58624524-58624543 Msa1166530:CDS 35.0%
CTAAGTGACATGCATATCTA+TGG + chr7_4:58624783-58624802 Msa1166530:intron 35.0%
CATATCTATGGTTGCATTTC+AGG + chr7_4:58624795-58624814 Msa1166530:intron 35.0%
TATCTATGGTTGCATTTCAG+GGG + chr7_4:58624797-58624816 Msa1166530:intron 35.0%
! ATGTGCTGATATACTCACAT+TGG + chr7_4:58624960-58624979 Msa1166530:CDS 35.0%
AGCTGTGTGATATTATGGAA+AGG - chr7_4:58625182-58625201 None:intergenic 35.0%
AAAGCTTACTCTTCATGACT+TGG + chr7_4:58625223-58625242 Msa1166530:CDS 35.0%
!! CATGACTTGGTTGTATTATC+AGG + chr7_4:58625236-58625255 Msa1166530:CDS 35.0%
TTGTATATGACCACATGTGT+CGG + chr7_4:58625460-58625479 Msa1166530:intron 35.0%
! TTTATAGGAGCACACACAAT+TGG + chr7_4:58625533-58625552 Msa1166530:intron 35.0%
ATTGCAACTTATTCAGCAAC+AGG + chr7_4:58625564-58625583 Msa1166530:CDS 35.0%
! CTTTTCAACTTCACTGGAAA+AGG + chr7_4:58625587-58625606 Msa1166530:CDS 35.0%
TCCTGTACTTCTACAAAACA+AGG + chr7_4:58625739-58625758 Msa1166530:CDS 35.0%
CCTGTACTTCTACAAAACAA+GGG + chr7_4:58625740-58625759 Msa1166530:CDS 35.0%
!! AACAATGTTTCTGGATTGCT+TGG - chr7_4:58625798-58625817 None:intergenic 35.0%
! CTTCATTGACTGAGAAAACT+CGG - chr7_4:58625852-58625871 None:intergenic 35.0%
! AGTTTTCTCAGTCAATGAAG+AGG + chr7_4:58625852-58625871 Msa1166530:CDS 35.0%
! AAAGCACCATAGAAGCTACA+AGG - chr7_4:58624502-58624521 None:intergenic 40.0%
! TTCATTGGGATTAGTGAAGG+AGG + chr7_4:58624527-58624546 Msa1166530:CDS 40.0%
TTAACAATCTCCTCAGCTTG+AGG - chr7_4:58624587-58624606 None:intergenic 40.0%
CCTTGAAGAGACATGTTGTA+GGG - chr7_4:58624618-58624637 None:intergenic 40.0%
TCAGCACATGATACAATTCC+TGG - chr7_4:58624949-58624968 None:intergenic 40.0%
!! ACCAAATTGGGAAGTGCTTA+CGG + chr7_4:58625100-58625119 Msa1166530:CDS 40.0%
!! AGGTGCTGGAATATTGATCA+GGG - chr7_4:58625162-58625181 None:intergenic 40.0%
!! AAGGTGCTGGAATATTGATC+AGG - chr7_4:58625163-58625182 None:intergenic 40.0%
! GTGATATTATGGAAAGGTGC+TGG - chr7_4:58625176-58625195 None:intergenic 40.0%
GTCTGAGCTGTGTGATATTA+TGG - chr7_4:58625187-58625206 None:intergenic 40.0%
CACGGACATAGAACAAACAT+CGG + chr7_4:58625384-58625403 Msa1166530:intron 40.0%
! AACAGGCTTTTCAACTTCAC+TGG + chr7_4:58625581-58625600 Msa1166530:CDS 40.0%
! GCATAAGTTGGATTCAGAGA+TGG - chr7_4:58625623-58625642 None:intergenic 40.0%
TTCTTGAAGACCAAATGCCA+AGG + chr7_4:58625647-58625666 Msa1166530:CDS 40.0%
!!! CCCTTGTTTTGTAGAAGTAC+AGG - chr7_4:58625743-58625762 None:intergenic 40.0%
TTCTCAGTCAATGAAGAGGA+TGG + chr7_4:58625856-58625875 Msa1166530:CDS 40.0%
TCTCAGTCAATGAAGAGGAT+GGG + chr7_4:58625857-58625876 Msa1166530:CDS 40.0%
TTTCTCCATTCAAACCAGTG+AGG - chr7_4:58625895-58625914 None:intergenic 40.0%
! AAAGCACCATAGAAGCTACA+AGG - chr7_4:58624502-58624521 None:intergenic 40.0%
! TTCATTGGGATTAGTGAAGG+AGG + chr7_4:58624527-58624546 Msa1166530:CDS 40.0%
TTAACAATCTCCTCAGCTTG+AGG - chr7_4:58624587-58624606 None:intergenic 40.0%
CCTTGAAGAGACATGTTGTA+GGG - chr7_4:58624618-58624637 None:intergenic 40.0%
TCAGCACATGATACAATTCC+TGG - chr7_4:58624949-58624968 None:intergenic 40.0%
!! ACCAAATTGGGAAGTGCTTA+CGG + chr7_4:58625100-58625119 Msa1166530:CDS 40.0%
!! AGGTGCTGGAATATTGATCA+GGG - chr7_4:58625162-58625181 None:intergenic 40.0%
!! AAGGTGCTGGAATATTGATC+AGG - chr7_4:58625163-58625182 None:intergenic 40.0%
! GTGATATTATGGAAAGGTGC+TGG - chr7_4:58625176-58625195 None:intergenic 40.0%
GTCTGAGCTGTGTGATATTA+TGG - chr7_4:58625187-58625206 None:intergenic 40.0%
CACGGACATAGAACAAACAT+CGG + chr7_4:58625384-58625403 Msa1166530:intron 40.0%
! AACAGGCTTTTCAACTTCAC+TGG + chr7_4:58625581-58625600 Msa1166530:CDS 40.0%
! GCATAAGTTGGATTCAGAGA+TGG - chr7_4:58625623-58625642 None:intergenic 40.0%
TTCTTGAAGACCAAATGCCA+AGG + chr7_4:58625647-58625666 Msa1166530:CDS 40.0%
!!! CCCTTGTTTTGTAGAAGTAC+AGG - chr7_4:58625743-58625762 None:intergenic 40.0%
TTCTCAGTCAATGAAGAGGA+TGG + chr7_4:58625856-58625875 Msa1166530:CDS 40.0%
TCTCAGTCAATGAAGAGGAT+GGG + chr7_4:58625857-58625876 Msa1166530:CDS 40.0%
TTTCTCCATTCAAACCAGTG+AGG - chr7_4:58625895-58625914 None:intergenic 40.0%
CCCTACAACATGTCTCTTCA+AGG + chr7_4:58624615-58624634 Msa1166530:CDS 45.0%
GCCTTGAAGAGACATGTTGT+AGG - chr7_4:58624619-58624638 None:intergenic 45.0%
! TGCAGTCTTATCAACTTGGC+TGG - chr7_4:58624650-58624669 None:intergenic 45.0%
!! GCTTTGGAGGAAAAATGTCC+AGG + chr7_4:58624928-58624947 Msa1166530:CDS 45.0%
!! CCAAATTGGGAAGTGCTTAC+GGG + chr7_4:58625101-58625120 Msa1166530:CDS 45.0%
!! TAATGTAGCACCGACACATG+TGG - chr7_4:58625473-58625492 None:intergenic 45.0%
ATCCATCTCTACTGTTGTGG+TGG - chr7_4:58625684-58625703 None:intergenic 45.0%
TGGATCCATCTCTACTGTTG+TGG - chr7_4:58625687-58625706 None:intergenic 45.0%
CCCTACAACATGTCTCTTCA+AGG + chr7_4:58624615-58624634 Msa1166530:CDS 45.0%
GCCTTGAAGAGACATGTTGT+AGG - chr7_4:58624619-58624638 None:intergenic 45.0%
! TGCAGTCTTATCAACTTGGC+TGG - chr7_4:58624650-58624669 None:intergenic 45.0%
!! GCTTTGGAGGAAAAATGTCC+AGG + chr7_4:58624928-58624947 Msa1166530:CDS 45.0%
!! CCAAATTGGGAAGTGCTTAC+GGG + chr7_4:58625101-58625120 Msa1166530:CDS 45.0%
!! TAATGTAGCACCGACACATG+TGG - chr7_4:58625473-58625492 None:intergenic 45.0%
ATCCATCTCTACTGTTGTGG+TGG - chr7_4:58625684-58625703 None:intergenic 45.0%
TGGATCCATCTCTACTGTTG+TGG - chr7_4:58625687-58625706 None:intergenic 45.0%
GAAGTCATGTCCTCAAGCTG+AGG + chr7_4:58624574-58624593 Msa1166530:CDS 50.0%
! ATTTCAGGGGTGTGACGCAT+CGG + chr7_4:58624810-58624829 Msa1166530:intron 50.0%
!!! GTGTGACGCATCGGTTTTGT+TGG + chr7_4:58624819-58624838 Msa1166530:CDS 50.0%
!! GTTTTGTTGGAGTCCACTGC+TGG + chr7_4:58624832-58624851 Msa1166530:CDS 50.0%
CCCGTAAGCACTTCCCAATT+TGG - chr7_4:58625104-58625123 None:intergenic 50.0%
GTGCTTACGGGTAGAAGAGA+TGG + chr7_4:58625113-58625132 Msa1166530:CDS 50.0%
GGAGCACACACAATTGGAGT+AGG + chr7_4:58625539-58625558 Msa1166530:intron 50.0%
GTCACTTAGGCCTTGGCATT+TGG - chr7_4:58625660-58625679 None:intergenic 50.0%
!! CTGTTGTGGTGGTGTCACTT+AGG - chr7_4:58625673-58625692 None:intergenic 50.0%
CACCACCACAACAGTAGAGA+TGG + chr7_4:58625679-58625698 Msa1166530:CDS 50.0%
GAAGAGGATGGGAGCTATTG+AGG + chr7_4:58625868-58625887 Msa1166530:CDS 50.0%
!! GAGGTCCTCACTGGTTTGAA+TGG + chr7_4:58625887-58625906 Msa1166530:CDS 50.0%
GAAGTCATGTCCTCAAGCTG+AGG + chr7_4:58624574-58624593 Msa1166530:CDS 50.0%
! ATTTCAGGGGTGTGACGCAT+CGG + chr7_4:58624810-58624829 Msa1166530:intron 50.0%
!!! GTGTGACGCATCGGTTTTGT+TGG + chr7_4:58624819-58624838 Msa1166530:CDS 50.0%
!! GTTTTGTTGGAGTCCACTGC+TGG + chr7_4:58624832-58624851 Msa1166530:CDS 50.0%
CCCGTAAGCACTTCCCAATT+TGG - chr7_4:58625104-58625123 None:intergenic 50.0%
GTGCTTACGGGTAGAAGAGA+TGG + chr7_4:58625113-58625132 Msa1166530:CDS 50.0%
GGAGCACACACAATTGGAGT+AGG + chr7_4:58625539-58625558 Msa1166530:intron 50.0%
GTCACTTAGGCCTTGGCATT+TGG - chr7_4:58625660-58625679 None:intergenic 50.0%
!! CTGTTGTGGTGGTGTCACTT+AGG - chr7_4:58625673-58625692 None:intergenic 50.0%
CACCACCACAACAGTAGAGA+TGG + chr7_4:58625679-58625698 Msa1166530:CDS 50.0%
GAAGAGGATGGGAGCTATTG+AGG + chr7_4:58625868-58625887 Msa1166530:CDS 50.0%
!! GAGGTCCTCACTGGTTTGAA+TGG + chr7_4:58625887-58625906 Msa1166530:CDS 50.0%
TTAGTGAAGGAGGCAGCCTC+AGG + chr7_4:58624537-58624556 Msa1166530:CDS 55.0%
ATCAACTTGGCTGGCAGCTC+AGG - chr7_4:58624641-58624660 None:intergenic 55.0%
GTCCACTGCTGGTAACACTG+CGG + chr7_4:58624843-58624862 Msa1166530:CDS 55.0%
TCGGACATGACATTGACGCG+TGG + chr7_4:58625403-58625422 Msa1166530:intron 55.0%
!! TGGTGGTGTCACTTAGGCCT+TGG - chr7_4:58625667-58625686 None:intergenic 55.0%
GGAGCTATTGAGGTCCTCAC+TGG + chr7_4:58625878-58625897 Msa1166530:CDS 55.0%
TTAGTGAAGGAGGCAGCCTC+AGG + chr7_4:58624537-58624556 Msa1166530:CDS 55.0%
ATCAACTTGGCTGGCAGCTC+AGG - chr7_4:58624641-58624660 None:intergenic 55.0%
GTCCACTGCTGGTAACACTG+CGG + chr7_4:58624843-58624862 Msa1166530:CDS 55.0%
TCGGACATGACATTGACGCG+TGG + chr7_4:58625403-58625422 Msa1166530:intron 55.0%
!! TGGTGGTGTCACTTAGGCCT+TGG - chr7_4:58625667-58625686 None:intergenic 55.0%
GGAGCTATTGAGGTCCTCAC+TGG + chr7_4:58625878-58625897 Msa1166530:CDS 55.0%
CTCCGCAGTGTTACCAGCAG+TGG - chr7_4:58624848-58624867 None:intergenic 60.0%
CTCCGCAGTGTTACCAGCAG+TGG - chr7_4:58624848-58624867 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 58624482 58625943 58624482 ID=Msa1166530;Name=Msa1166530
chr7_4 mRNA 58624482 58625943 58624482 ID=Msa1166530-mRNA-1;Parent=Msa1166530;Name=Msa1166530-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|4|0|320
chr7_4 exon 58624482 58624691 58624482 ID=Msa1166530-mRNA-1:exon:18016;Parent=Msa1166530-mRNA-1
chr7_4 exon 58624817 58624996 58624817 ID=Msa1166530-mRNA-1:exon:18017;Parent=Msa1166530-mRNA-1
chr7_4 exon 58625089 58625257 58625089 ID=Msa1166530-mRNA-1:exon:18018;Parent=Msa1166530-mRNA-1
chr7_4 exon 58625540 58625943 58625540 ID=Msa1166530-mRNA-1:exon:18019;Parent=Msa1166530-mRNA-1
chr7_4 CDS 58624482 58624691 58624482 ID=Msa1166530-mRNA-1:cds;Parent=Msa1166530-mRNA-1
chr7_4 CDS 58624817 58624996 58624817 ID=Msa1166530-mRNA-1:cds;Parent=Msa1166530-mRNA-1
chr7_4 CDS 58625089 58625257 58625089 ID=Msa1166530-mRNA-1:cds;Parent=Msa1166530-mRNA-1
chr7_4 CDS 58625540 58625943 58625540 ID=Msa1166530-mRNA-1:cds;Parent=Msa1166530-mRNA-1
Gene Sequence

>Msa1166530

ATGAAGATGAAATTCTTCCTTGTAGCTTCTATGGTGCTTTTCTGTTTCATTGGGATTAGTGAAGGAGGCAGCCTCAGGAAGAATTTTTATAAGAAGTCATGTCCTCAAGCTGAGGAGATTGTTAAGAACGTAACCCTACAACATGTCTCTTCAAGGCCTGAGCTGCCAGCCAAGTTGATAAGACTGCATTTTCATGACTGTTTTGTTAGGGGGTGTGACGCATCGGTTTTGTTGGAGTCCACTGCTGGTAACACTGCGGAGAAAGATGCCATTCCTAATTTATCATTAGCAGGCTTTGATGTGATAGAAGACATAAAAAAAGCTTTGGAGGAAAAATGTCCAGGAATTGTATCATGTGCTGATATACTCACATTGGCTACTAGAGATGCTTTTAAGAATAAACCAAATTGGGAAGTGCTTACGGGTAGAAGAGATGGTACTGTGTCTAGAAGCATTGAAGCCCTGATCAATATTCCAGCACCTTTCCATAATATCACACAGCTCAGACAAATCTTTGCTAGTAAAAAGCTTACTCTTCATGACTTGGTTGTATTATCAGGAGCACACACAATTGGAGTAGGACATTGCAACTTATTCAGCAACAGGCTTTTCAACTTCACTGGAAAAGGTGATCAAGATCCATCTCTGAATCCAACTTATGCAAATTTCTTGAAGACCAAATGCCAAGGCCTAAGTGACACCACCACAACAGTAGAGATGGATCCAAATAGCTCAACAACATTTGACAATGACTATTATCCTGTACTTCTACAAAACAAGGGTCTCTTCACATCAGACGCTGCTCTTCTAACAACCAAGCAATCCAGAAACATTGTTAATGAATTGGTTTCACAAAACAAATTCTTCACCGAGTTTTCTCAGTCAATGAAGAGGATGGGAGCTATTGAGGTCCTCACTGGTTTGAATGGAGAAATTAGAAGGAAGTGCTCTGTTGTTAATTAA

Protein sequence

>Msa1166530

MKMKFFLVASMVLFCFIGISEGGSLRKNFYKKSCPQAEEIVKNVTLQHVSSRPELPAKLIRLHFHDCFVRGCDASVLLESTAGNTAEKDAIPNLSLAGFDVIEDIKKALEEKCPGIVSCADILTLATRDAFKNKPNWEVLTGRRDGTVSRSIEALINIPAPFHNITQLRQIFASKKLTLHDLVVLSGAHTIGVGHCNLFSNRLFNFTGKGDQDPSLNPTYANFLKTKCQGLSDTTTTVEMDPNSSTTFDNDYYPVLLQNKGLFTSDAALLTTKQSRNIVNELVSQNKFFTEFSQSMKRMGAIEVLTGLNGEIRRKCSVVN*