Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695630 | XP_013457028.1 | 86.316 | 285 | 33 | 3 | 1 | 279 | 1 | 285 | 4.40e-179 | 508 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695630 | A0A072UMP5 | 86.316 | 285 | 33 | 3 | 1 | 279 | 1 | 285 | 2.10e-179 | 508 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa0695630 | -0.806833 | 6.787825e-50 | -8.615850e-47 |
| Msa0004340 | Msa0695630 | -0.808959 | 2.396296e-50 | -8.615850e-47 |
| Msa0007570 | Msa0695630 | -0.801472 | 8.858889e-49 | -8.615850e-47 |
| Msa0008250 | Msa0695630 | -0.817148 | 3.832376e-52 | -8.615850e-47 |
| Msa0010150 | Msa0695630 | 0.813939 | 1.985416e-51 | -8.615850e-47 |
| Msa0014590 | Msa0695630 | 0.801626 | 8.241245e-49 | -8.615850e-47 |
| Msa0022230 | Msa0695630 | -0.807231 | 5.591608e-50 | -8.615850e-47 |
| Msa0027030 | Msa0695630 | -0.814020 | 1.905261e-51 | -8.615850e-47 |
| Msa0029280 | Msa0695630 | -0.813506 | 2.473546e-51 | -8.615850e-47 |
| Msa0030760 | Msa0695630 | -0.807399 | 5.152249e-50 | -8.615850e-47 |
| Msa0034100 | Msa0695630 | -0.811592 | 6.481535e-51 | -8.615850e-47 |
| Msa0037180 | Msa0695630 | 0.816903 | 4.349604e-52 | -8.615850e-47 |
| Msa0040210 | Msa0695630 | 0.800861 | 1.181512e-48 | -8.615850e-47 |
| Msa0059880 | Msa0695630 | 0.826583 | 2.504856e-54 | -8.615850e-47 |
| Msa0064990 | Msa0695630 | 0.804919 | 1.714495e-49 | -8.615850e-47 |
| Msa0069480 | Msa0695630 | 0.820198 | 7.784172e-53 | -8.615850e-47 |
| Msa0076640 | Msa0695630 | 0.832026 | 1.195308e-55 | -8.615850e-47 |
| Msa0081700 | Msa0695630 | -0.818251 | 2.161089e-52 | -8.615850e-47 |
| Msa0091340 | Msa0695630 | -0.804120 | 2.516321e-49 | -8.615850e-47 |
| Msa0092220 | Msa0695630 | 0.831195 | 1.915231e-55 | -8.615850e-47 |
| Msa0094990 | Msa0695630 | -0.806373 | 8.487555e-50 | -8.615850e-47 |
| Msa0099090 | Msa0695630 | -0.818186 | 2.235588e-52 | -8.615850e-47 |
| Msa0105590 | Msa0695630 | -0.811078 | 8.378752e-51 | -8.615850e-47 |
| Msa0605020 | Msa0695630 | 0.801508 | 8.710750e-49 | -8.615850e-47 |
| Msa0608780 | Msa0695630 | -0.802109 | 6.558422e-49 | -8.615850e-47 |
| Msa0609460 | Msa0695630 | 0.809144 | 2.188063e-50 | -8.615850e-47 |
| Msa0610300 | Msa0695630 | -0.803739 | 3.018812e-49 | -8.615850e-47 |
| Msa0612580 | Msa0695630 | 0.914759 | 1.313849e-84 | -8.615850e-47 |
| Msa0614020 | Msa0695630 | -0.801190 | 1.012191e-48 | -8.615850e-47 |
| Msa0614290 | Msa0695630 | 0.834752 | 2.499644e-56 | -8.615850e-47 |
| Msa0615430 | Msa0695630 | -0.808629 | 2.819603e-50 | -8.615850e-47 |
| Msa0616890 | Msa0695630 | -0.801628 | 8.230949e-49 | -8.615850e-47 |
| Msa0617470 | Msa0695630 | -0.817191 | 3.747632e-52 | -8.615850e-47 |
| Msa0618490 | Msa0695630 | -0.806421 | 8.295688e-50 | -8.615850e-47 |
| Msa0619460 | Msa0695630 | -0.806658 | 7.392312e-50 | -8.615850e-47 |
| Msa0619670 | Msa0695630 | 0.800069 | 1.712921e-48 | -8.615850e-47 |
| Msa0624930 | Msa0695630 | 0.805442 | 1.332294e-49 | -8.615850e-47 |
| Msa0625900 | Msa0695630 | -0.835987 | 1.218473e-56 | -8.615850e-47 |
| Msa0631700 | Msa0695630 | 0.801697 | 7.969299e-49 | -8.615850e-47 |
| Msa0632040 | Msa0695630 | -0.816890 | 4.379127e-52 | -8.615850e-47 |
| Msa0633630 | Msa0695630 | 0.806075 | 9.809030e-50 | -8.615850e-47 |
| Msa0634900 | Msa0695630 | -0.807939 | 3.955656e-50 | -8.615850e-47 |
| Msa0638550 | Msa0695630 | -0.800944 | 1.136234e-48 | -8.615850e-47 |
| Msa0638810 | Msa0695630 | 0.820410 | 6.961837e-53 | -8.615850e-47 |
| Msa0638820 | Msa0695630 | 0.837066 | 6.471825e-57 | -8.615850e-47 |
| Msa0646670 | Msa0695630 | 0.801445 | 8.973250e-49 | -8.615850e-47 |
| Msa0649250 | Msa0695630 | -0.809316 | 2.009649e-50 | -8.615850e-47 |
| Msa0650100 | Msa0695630 | 0.802612 | 5.166283e-49 | -8.615850e-47 |
| Msa0654880 | Msa0695630 | -0.817302 | 3.537785e-52 | -8.615850e-47 |
| Msa0658280 | Msa0695630 | -0.807876 | 4.079549e-50 | -8.615850e-47 |
| Msa0659590 | Msa0695630 | -0.801695 | 7.975486e-49 | -8.615850e-47 |
| Msa0662670 | Msa0695630 | -0.820725 | 5.893684e-53 | -8.615850e-47 |
| Msa0663580 | Msa0695630 | -0.839018 | 2.036287e-57 | -8.615850e-47 |
| Msa0663690 | Msa0695630 | -0.835576 | 1.548589e-56 | -8.615850e-47 |
| Msa0672950 | Msa0695630 | 0.800189 | 1.619841e-48 | -8.615850e-47 |
| Msa0686810 | Msa0695630 | 0.802786 | 4.755384e-49 | -8.615850e-47 |
| Msa0695630 | Msa0697510 | 0.843259 | 1.563756e-58 | -8.615850e-47 |
| Msa0695630 | Msa0697520 | 0.839057 | 1.989605e-57 | -8.615850e-47 |
| Msa0695630 | Msa0698110 | 0.825405 | 4.771756e-54 | -8.615850e-47 |
| Msa0695630 | Msa0698480 | -0.808730 | 2.683214e-50 | -8.615850e-47 |
| Msa0695630 | Msa0698650 | -0.809053 | 2.288214e-50 | -8.615850e-47 |
| Msa0695630 | Msa0700250 | -0.814267 | 1.680483e-51 | -8.615850e-47 |
| Msa0695630 | Msa0701800 | -0.800802 | 1.214599e-48 | -8.615850e-47 |
| Msa0695630 | Msa0702020 | -0.829553 | 4.827467e-55 | -8.615850e-47 |
| Msa0695630 | Msa0705520 | 0.860993 | 1.401830e-63 | -8.615850e-47 |
| Msa0695630 | Msa0705710 | -0.814559 | 1.448445e-51 | -8.615850e-47 |
| Msa0695630 | Msa0706130 | -0.804460 | 2.137045e-49 | -8.615850e-47 |
| Msa0695630 | Msa0707860 | -0.806596 | 7.616691e-50 | -8.615850e-47 |
| Msa0695630 | Msa0708870 | -0.822387 | 2.434240e-53 | -8.615850e-47 |
| Msa0695630 | Msa0717540 | -0.808544 | 2.940052e-50 | -8.615850e-47 |
| Msa0695630 | Msa0741170 | 0.822938 | 1.812363e-53 | -8.615850e-47 |
| Msa0695630 | Msa0744690 | -0.802443 | 5.597066e-49 | -8.615850e-47 |
| Msa0695630 | Msa0750490 | -0.812301 | 4.542527e-51 | -8.615850e-47 |
| Msa0695630 | Msa0756670 | -0.806761 | 7.029787e-50 | -8.615850e-47 |
| Msa0695630 | Msa0774360 | -0.806205 | 9.210232e-50 | -8.615850e-47 |
| Msa0695630 | Msa0797980 | -0.821029 | 5.018016e-53 | -8.615850e-47 |
| Msa0695630 | Msa0807950 | -0.803841 | 2.875112e-49 | -8.615850e-47 |
| Msa0695630 | Msa0814160 | 0.819050 | 1.423324e-52 | -8.615850e-47 |
| Msa0695630 | Msa0822410 | 0.804495 | 2.101948e-49 | -8.615850e-47 |
| Msa0695630 | Msa0826360 | 0.805674 | 1.191043e-49 | -8.615850e-47 |
| Msa0695630 | Msa0826370 | 0.801863 | 7.367520e-49 | -8.615850e-47 |
| Msa0695630 | Msa0829430 | -0.818691 | 1.717557e-52 | -8.615850e-47 |
| Msa0695630 | Msa0836060 | -0.805344 | 1.396928e-49 | -8.615850e-47 |
| Msa0695630 | Msa0838100 | -0.806303 | 8.781995e-50 | -8.615850e-47 |
| Msa0695630 | Msa0844970 | -0.806441 | 8.215330e-50 | -8.615850e-47 |
| Msa0695630 | Msa0846070 | -0.812756 | 3.612925e-51 | -8.615850e-47 |
| Msa0695630 | Msa0854840 | 0.801832 | 7.474875e-49 | -8.615850e-47 |
| Msa0695630 | Msa0861400 | -0.815919 | 7.221544e-52 | -8.615850e-47 |
| Msa0695630 | Msa0861820 | 0.811022 | 8.619876e-51 | -8.615850e-47 |
| Msa0695630 | Msa0893840 | 0.803321 | 3.685970e-49 | -8.615850e-47 |
| Msa0695630 | Msa0898830 | -0.804085 | 2.558786e-49 | -8.615850e-47 |
| Msa0695630 | Msa0906100 | -0.810439 | 1.151841e-50 | -8.615850e-47 |
| Msa0695630 | Msa0907170 | 0.808950 | 2.407867e-50 | -8.615850e-47 |
| Msa0695630 | Msa0914710 | 0.813375 | 2.641853e-51 | -8.615850e-47 |
| Msa0695630 | Msa0917630 | -0.836412 | 9.501161e-57 | -8.615850e-47 |
| Msa0695630 | Msa0925630 | -0.806806 | 6.879224e-50 | -8.615850e-47 |
| Msa0695630 | Msa0934290 | -0.806212 | 9.181052e-50 | -8.615850e-47 |
| Msa0695630 | Msa0947520 | 0.808575 | 2.894998e-50 | -8.615850e-47 |
| Msa0695630 | Msa0949410 | 0.809793 | 1.587705e-50 | -8.615850e-47 |
| Msa0695630 | Msa0967900 | -0.834803 | 2.426970e-56 | -8.615850e-47 |
| Msa0695630 | Msa0971780 | -0.801192 | 1.010944e-48 | -8.615850e-47 |
| Msa0695630 | Msa0986160 | 0.806680 | 7.313161e-50 | -8.615850e-47 |
| Msa0695630 | Msa0998660 | -0.814855 | 1.245619e-51 | -8.615850e-47 |
| Msa0695630 | Msa1004300 | -0.807358 | 5.255704e-50 | -8.615850e-47 |
| Msa0695630 | Msa1006170 | 0.805227 | 1.478061e-49 | -8.615850e-47 |
| Msa0695630 | Msa1007160 | 0.812779 | 3.571199e-51 | -8.615850e-47 |
| Msa0695630 | Msa1015020 | -0.822243 | 2.629342e-53 | -8.615850e-47 |
| Msa0695630 | Msa1024350 | 0.811001 | 8.710502e-51 | -8.615850e-47 |
| Msa0695630 | Msa1026490 | 0.801389 | 9.213598e-49 | -8.615850e-47 |
| Msa0695630 | Msa1029570 | -0.805747 | 1.149764e-49 | -8.615850e-47 |
| Msa0695630 | Msa1031530 | -0.800580 | 1.348475e-48 | -8.615850e-47 |
| Msa0695630 | Msa1035640 | -0.801874 | 7.327383e-49 | -8.615850e-47 |
| Msa0695630 | Msa1035790 | -0.818319 | 2.085331e-52 | -8.615850e-47 |
| Msa0695630 | Msa1036260 | -0.804593 | 2.005321e-49 | -8.615850e-47 |
| Msa0695630 | Msa1041650 | 0.803532 | 3.332403e-49 | -8.615850e-47 |
| Msa0695630 | Msa1049810 | 0.806819 | 6.835889e-50 | -8.615850e-47 |
| Msa0695630 | Msa1049850 | 0.807769 | 4.300338e-50 | -8.615850e-47 |
| Msa0695630 | Msa1056590 | -0.811111 | 8.244703e-51 | -8.615850e-47 |
| Msa0695630 | Msa1056790 | -0.812879 | 3.395607e-51 | -8.615850e-47 |
| Msa0695630 | Msa1066790 | -0.800617 | 1.324772e-48 | -8.615850e-47 |
| Msa0695630 | Msa1069270 | 0.812615 | 3.878847e-51 | -8.615850e-47 |
| Msa0695630 | Msa1070630 | -0.807743 | 4.355329e-50 | -8.615850e-47 |
| Msa0695630 | Msa1074560 | 0.815634 | 8.362405e-52 | -8.615850e-47 |
| Msa0695630 | Msa1076830 | 0.802463 | 5.544024e-49 | -8.615850e-47 |
| Msa0695630 | Msa1078210 | -0.814712 | 1.339672e-51 | -8.615850e-47 |
| Msa0695630 | Msa1078600 | -0.814678 | 1.363124e-51 | -8.615850e-47 |
| Msa0695630 | Msa1078770 | -0.815960 | 7.073135e-52 | -8.615850e-47 |
| Msa0695630 | Msa1082080 | 0.812114 | 4.989150e-51 | -8.615850e-47 |
| Msa0695630 | Msa1084210 | -0.813372 | 2.646452e-51 | -8.615850e-47 |
| Msa0695630 | Msa1088000 | -0.805353 | 1.390529e-49 | -8.615850e-47 |
| Msa0695630 | Msa1090150 | 0.829532 | 4.884648e-55 | -8.615850e-47 |
| Msa0695630 | Msa1093190 | -0.811088 | 8.339024e-51 | -8.615850e-47 |
| Msa0695630 | Msa1093420 | 0.806543 | 7.817665e-50 | -8.615850e-47 |
| Msa0695630 | Msa1098100 | 0.803606 | 3.217694e-49 | -8.615850e-47 |
| Msa0695630 | Msa1109500 | -0.803830 | 2.890197e-49 | -8.615850e-47 |
| Msa0695630 | Msa1111650 | 0.805805 | 1.117896e-49 | -8.615850e-47 |
| Msa0695630 | Msa1112210 | -0.807336 | 5.313490e-50 | -8.615850e-47 |
| Msa0695630 | Msa1112230 | -0.802452 | 5.573764e-49 | -8.615850e-47 |
| Msa0695630 | Msa1120560 | 0.835365 | 1.750488e-56 | -8.615850e-47 |
| Msa0695630 | Msa1123440 | -0.814711 | 1.340567e-51 | -8.615850e-47 |
| Msa0695630 | Msa1125450 | -0.810147 | 1.331797e-50 | -8.615850e-47 |
| Msa0695630 | Msa1128230 | -0.822644 | 2.121972e-53 | -8.615850e-47 |
| Msa0695630 | Msa1134420 | -0.813080 | 3.067157e-51 | -8.615850e-47 |
| Msa0695630 | Msa1136770 | -0.807538 | 4.814012e-50 | -8.615850e-47 |
| Msa0695630 | Msa1138110 | 0.806285 | 8.858358e-50 | -8.615850e-47 |
| Msa0695630 | Msa1143060 | -0.820567 | 6.408662e-53 | -8.615850e-47 |
| Msa0695630 | Msa1146980 | 0.811325 | 7.407530e-51 | -8.615850e-47 |
| Msa0695630 | Msa1157130 | 0.820386 | 7.051080e-53 | -8.615850e-47 |
| Msa0695630 | Msa1157200 | 0.823023 | 1.731338e-53 | -8.615850e-47 |
| Msa0695630 | Msa1158450 | -0.804446 | 2.152169e-49 | -8.615850e-47 |
| Msa0695630 | Msa1164570 | -0.808404 | 3.149494e-50 | -8.615850e-47 |
| Msa0695630 | Msa1166550 | 0.800958 | 1.128803e-48 | -8.615850e-47 |
| Msa0695630 | Msa1169600 | -0.813724 | 2.214244e-51 | -8.615850e-47 |
| Msa0695630 | Msa1170320 | 0.800559 | 1.361721e-48 | -8.615850e-47 |
| Msa0695630 | Msa1182400 | -0.800777 | 1.228878e-48 | -8.615850e-47 |
| Msa0695630 | Msa1202710 | -0.817999 | 2.464408e-52 | -8.615850e-47 |
| Msa0695630 | Msa1205270 | -0.830184 | 3.388660e-55 | -8.615850e-47 |
| Msa0695630 | Msa1209990 | -0.805878 | 1.079373e-49 | -8.615850e-47 |
| Msa0695630 | Msa1214960 | 0.818033 | 2.421294e-52 | -8.615850e-47 |
| Msa0695630 | Msa1221540 | -0.800083 | 1.702258e-48 | -8.615850e-47 |
| Msa0695630 | Msa1223060 | -0.803693 | 3.085764e-49 | -8.615850e-47 |
| Msa0695630 | Msa1228600 | -0.839733 | 1.328360e-57 | -8.615850e-47 |
| Msa0695630 | Msa1254990 | -0.819235 | 1.291615e-52 | -8.615850e-47 |
| Msa0695630 | Msa1267390 | -0.809236 | 2.090445e-50 | -8.615850e-47 |
| Msa0695630 | Msa1269370 | -0.827990 | 1.152756e-54 | -8.615850e-47 |
| Msa0695630 | Msa1286950 | -0.805124 | 1.553164e-49 | -8.615850e-47 |
| Msa0695630 | Msa1297220 | -0.833245 | 5.958187e-56 | -8.615850e-47 |
| Msa0695630 | Msa1298480 | -0.805289 | 1.434523e-49 | -8.615850e-47 |
| Msa0695630 | Msa1301610 | -0.813156 | 2.952451e-51 | -8.615850e-47 |
| Msa0695630 | Msa1319230 | -0.802957 | 4.383757e-49 | -8.615850e-47 |
| Msa0695630 | Msa1323260 | -0.832597 | 8.632750e-56 | -8.615850e-47 |
| Msa0695630 | Msa1326800 | -0.829139 | 6.083724e-55 | -8.615850e-47 |
| Msa0695630 | Msa1327690 | -0.827969 | 1.166210e-54 | -8.615850e-47 |
| Msa0695630 | Msa1342360 | -0.816942 | 4.263803e-52 | -8.615850e-47 |
| Msa0695630 | Msa1343450 | -0.845444 | 4.045523e-59 | -8.615850e-47 |
| Msa0695630 | Msa1344930 | 0.855555 | 5.830933e-62 | -8.615850e-47 |
| Msa0695630 | Msa1345390 | 0.865869 | 4.318145e-65 | -8.615850e-47 |
| Msa0695630 | Msa1346220 | -0.818758 | 1.658666e-52 | -8.615850e-47 |
| Msa0695630 | Msa1346340 | -0.808709 | 2.711007e-50 | -8.615850e-47 |
| Msa0695630 | Msa1348860 | -0.817481 | 3.224097e-52 | -8.615850e-47 |
| Msa0695630 | Msa1350580 | -0.810352 | 1.203050e-50 | -8.615850e-47 |
| Msa0695630 | Msa1353130 | 0.809427 | 1.902236e-50 | -8.615850e-47 |
| Msa0695630 | Msa1357090 | -0.801951 | 7.064566e-49 | -8.615850e-47 |
| Msa0695630 | Msa1365850 | 0.801695 | 7.976995e-49 | -8.615850e-47 |
| Msa0695630 | Msa1368400 | 0.806475 | 8.081136e-50 | -8.615850e-47 |
| Msa0695630 | Msa1369220 | -0.817436 | 3.301249e-52 | -8.615850e-47 |
| Msa0695630 | Msa1371060 | -0.811222 | 7.800235e-51 | -8.615850e-47 |
| Msa0695630 | Msa1371540 | -0.821352 | 4.226834e-53 | -8.615850e-47 |
| Msa0695630 | Msa1372570 | -0.800367 | 1.489654e-48 | -8.615850e-47 |
| Msa0695630 | Msa1373990 | 0.849894 | 2.411518e-60 | -8.615850e-47 |
| Msa0695630 | Msa1375640 | 0.804328 | 2.276984e-49 | -8.615850e-47 |
| Msa0695630 | Msa1375980 | -0.822025 | 2.954364e-53 | -8.615850e-47 |
| Msa0695630 | Msa1377980 | -0.824017 | 1.013884e-53 | -8.615850e-47 |
| Msa0695630 | Msa1378840 | -0.808740 | 2.670105e-50 | -8.615850e-47 |
| Msa0695630 | Msa1380740 | 0.804185 | 2.439076e-49 | -8.615850e-47 |
| Msa0695630 | Msa1382100 | -0.828625 | 8.103057e-55 | -8.615850e-47 |
| Msa0695630 | Msa1384410 | -0.809035 | 2.308979e-50 | -8.615850e-47 |
| Msa0695630 | Msa1398120 | 0.807244 | 5.557832e-50 | -8.615850e-47 |
| Msa0695630 | Msa1398150 | -0.811749 | 5.991651e-51 | -8.615850e-47 |
| Msa0695630 | Msa1402300 | 0.802105 | 6.569775e-49 | -8.615850e-47 |
| Msa0695630 | Msa1403820 | -0.803868 | 2.839220e-49 | -8.615850e-47 |
| Msa0695630 | Msa1408280 | -0.821598 | 3.708488e-53 | -8.615850e-47 |
| Msa0695630 | Msa1414340 | 0.846815 | 1.712996e-59 | -8.615850e-47 |
| Msa0695630 | Msa1426310 | -0.800844 | 1.191087e-48 | -8.615850e-47 |
| Msa0695630 | Msa1438780 | -0.814725 | 1.330759e-51 | -8.615850e-47 |
| Msa0695630 | Msa1450780 | -0.816529 | 5.275986e-52 | -8.615850e-47 |
| Msa0695630 | Msa1450850 | -0.802882 | 4.543236e-49 | -8.615850e-47 |
| Msa0695630 | Msa1453180 | -0.802977 | 4.341977e-49 | -8.615850e-47 |
| Msa0695630 | Msa1456170 | -0.824612 | 7.345056e-54 | -8.615850e-47 |
| Msa0695630 | Msa1456620 | -0.829479 | 5.029613e-55 | -8.615850e-47 |
| Msa0695630 | Msa1459130 | -0.800788 | 1.222845e-48 | -8.615850e-47 |
| Msa0695630 | Msa1460530 | -0.802378 | 5.771744e-49 | -8.615850e-47 |
| Msa0695630 | Msa1464470 | -0.803911 | 2.781123e-49 | -8.615850e-47 |
| Msa0695630 | Msa1466530 | 0.838959 | 2.108705e-57 | -8.615850e-47 |
| Msa0121080 | Msa0695630 | -0.807114 | 5.919265e-50 | -8.615850e-47 |
| Msa0121320 | Msa0695630 | 0.808005 | 3.830109e-50 | -8.615850e-47 |
| Msa0127060 | Msa0695630 | -0.805119 | 1.557087e-49 | -8.615850e-47 |
| Msa0127220 | Msa0695630 | -0.806355 | 8.562451e-50 | -8.615850e-47 |
| Msa0127910 | Msa0695630 | -0.823026 | 1.728757e-53 | -8.615850e-47 |
| Msa0128110 | Msa0695630 | -0.804549 | 2.047650e-49 | -8.615850e-47 |
| Msa0128740 | Msa0695630 | 0.810005 | 1.429305e-50 | -8.615850e-47 |
| Msa0131460 | Msa0695630 | 0.815476 | 9.065020e-52 | -8.615850e-47 |
| Msa0132080 | Msa0695630 | -0.807663 | 4.528138e-50 | -8.615850e-47 |
| Msa0134570 | Msa0695630 | 0.815682 | 8.155981e-52 | -8.615850e-47 |
| Msa0138340 | Msa0695630 | -0.822509 | 2.280786e-53 | -8.615850e-47 |
| Msa0140270 | Msa0695630 | 0.806844 | 6.751492e-50 | -8.615850e-47 |
| Msa0143280 | Msa0695630 | -0.801826 | 7.497104e-49 | -8.615850e-47 |
| Msa0146210 | Msa0695630 | 0.849559 | 2.992051e-60 | -8.615850e-47 |
| Msa0147540 | Msa0695630 | -0.812042 | 5.173805e-51 | -8.615850e-47 |
| Msa0147960 | Msa0695630 | -0.821004 | 5.084613e-53 | -8.615850e-47 |
| Msa0150910 | Msa0695630 | 0.828802 | 7.342727e-55 | -8.615850e-47 |
| Msa0166180 | Msa0695630 | 0.811913 | 5.518957e-51 | -8.615850e-47 |
| Msa0167150 | Msa0695630 | -0.813761 | 2.173109e-51 | -8.615850e-47 |
| Msa0174060 | Msa0695630 | -0.807948 | 3.937944e-50 | -8.615850e-47 |
| Msa0177260 | Msa0695630 | 0.819767 | 9.767721e-53 | -8.615850e-47 |
| Msa0178440 | Msa0695630 | -0.803311 | 3.703179e-49 | -8.615850e-47 |
| Msa0180100 | Msa0695630 | -0.800582 | 1.346758e-48 | -8.615850e-47 |
| Msa0186400 | Msa0695630 | -0.800076 | 1.708004e-48 | -8.615850e-47 |
| Msa0190670 | Msa0695630 | 0.815695 | 8.101863e-52 | -8.615850e-47 |
| Msa0190890 | Msa0695630 | 0.808128 | 3.606906e-50 | -8.615850e-47 |
| Msa0191100 | Msa0695630 | 0.801646 | 8.161234e-49 | -8.615850e-47 |
| Msa0194750 | Msa0695630 | -0.824679 | 7.083870e-54 | -8.615850e-47 |
| Msa0196280 | Msa0695630 | 0.804233 | 2.383929e-49 | -8.615850e-47 |
| Msa0207150 | Msa0695630 | -0.805668 | 1.194693e-49 | -8.615850e-47 |
| Msa0207640 | Msa0695630 | 0.806897 | 6.581100e-50 | -8.615850e-47 |
| Msa0208040 | Msa0695630 | -0.806218 | 9.152767e-50 | -8.615850e-47 |
| Msa0208710 | Msa0695630 | -0.811113 | 8.234987e-51 | -8.615850e-47 |
| Msa0209370 | Msa0695630 | -0.812841 | 3.460171e-51 | -8.615850e-47 |
| Msa0212550 | Msa0695630 | 0.806356 | 8.559572e-50 | -8.615850e-47 |
| Msa0214800 | Msa0695630 | 0.804661 | 1.940496e-49 | -8.615850e-47 |
| Msa0218140 | Msa0695630 | 0.811139 | 8.129911e-51 | -8.615850e-47 |
| Msa0223590 | Msa0695630 | 0.803183 | 3.936024e-49 | -8.615850e-47 |
| Msa0224210 | Msa0695630 | 0.829967 | 3.827787e-55 | -8.615850e-47 |
| Msa0225070 | Msa0695630 | -0.829864 | 4.054238e-55 | -8.615850e-47 |
| Msa0227970 | Msa0695630 | -0.808813 | 2.575923e-50 | -8.615850e-47 |
| Msa0229350 | Msa0695630 | -0.806592 | 7.632326e-50 | -8.615850e-47 |
| Msa0231850 | Msa0695630 | 0.848430 | 6.161313e-60 | -8.615850e-47 |
| Msa0236690 | Msa0695630 | -0.830499 | 2.837557e-55 | -8.615850e-47 |
| Msa0238140 | Msa0695630 | 0.851856 | 6.755902e-61 | -8.615850e-47 |
| Msa0368620 | Msa0695630 | 0.824663 | 7.144650e-54 | -8.615850e-47 |
| Msa0374040 | Msa0695630 | 0.823233 | 1.546464e-53 | -8.615850e-47 |
| Msa0375030 | Msa0695630 | 0.815571 | 8.636359e-52 | -8.615850e-47 |
| Msa0375570 | Msa0695630 | -0.811989 | 5.311901e-51 | -8.615850e-47 |
| Msa0386890 | Msa0695630 | 0.806430 | 8.258639e-50 | -8.615850e-47 |
| Msa0389570 | Msa0695630 | -0.811809 | 5.813226e-51 | -8.615850e-47 |
| Msa0389710 | Msa0695630 | 0.828895 | 6.969752e-55 | -8.615850e-47 |
| Msa0390590 | Msa0695630 | -0.824946 | 6.127817e-54 | -8.615850e-47 |
| Msa0390790 | Msa0695630 | 0.826678 | 2.377626e-54 | -8.615850e-47 |
| Msa0401260 | Msa0695630 | 0.805319 | 1.413585e-49 | -8.615850e-47 |
| Msa0403740 | Msa0695630 | -0.813504 | 2.475648e-51 | -8.615850e-47 |
| Msa0416040 | Msa0695630 | 0.822289 | 2.565389e-53 | -8.615850e-47 |
| Msa0422230 | Msa0695630 | -0.822218 | 2.664116e-53 | -8.615850e-47 |
| Msa0423690 | Msa0695630 | 0.801139 | 1.036628e-48 | -8.615850e-47 |
| Msa0424220 | Msa0695630 | -0.801918 | 7.178545e-49 | -8.615850e-47 |
| Msa0427750 | Msa0695630 | -0.808484 | 3.028350e-50 | -8.615850e-47 |
| Msa0428300 | Msa0695630 | -0.801054 | 1.079193e-48 | -8.615850e-47 |
| Msa0428720 | Msa0695630 | -0.806406 | 8.353302e-50 | -8.615850e-47 |
| Msa0434820 | Msa0695630 | -0.812512 | 4.084379e-51 | -8.615850e-47 |
| Msa0438440 | Msa0695630 | -0.811847 | 5.703672e-51 | -8.615850e-47 |
| Msa0447830 | Msa0695630 | -0.806533 | 7.853906e-50 | -8.615850e-47 |
| Msa0450230 | Msa0695630 | -0.815422 | 9.319903e-52 | -8.615850e-47 |
| Msa0456450 | Msa0695630 | -0.816960 | 4.223583e-52 | -8.615850e-47 |
| Msa0457070 | Msa0695630 | -0.812389 | 4.345654e-51 | -8.615850e-47 |
| Msa0472390 | Msa0695630 | 0.806236 | 9.074315e-50 | -8.615850e-47 |
| Msa0474220 | Msa0695630 | -0.807511 | 4.876979e-50 | -8.615850e-47 |
| Msa0478730 | Msa0695630 | -0.804442 | 2.155845e-49 | -8.615850e-47 |
| Msa0480260 | Msa0695630 | 0.824227 | 9.047275e-54 | -8.615850e-47 |
| Msa0252930 | Msa0695630 | 0.811934 | 5.460160e-51 | -8.615850e-47 |
| Msa0266140 | Msa0695630 | -0.811690 | 6.170676e-51 | -8.615850e-47 |
| Msa0269430 | Msa0695630 | -0.810728 | 9.976478e-51 | -8.615850e-47 |
| Msa0269660 | Msa0695630 | -0.830562 | 2.738880e-55 | -8.615850e-47 |
| Msa0270730 | Msa0695630 | -0.808247 | 3.401953e-50 | -8.615850e-47 |
| Msa0270840 | Msa0695630 | -0.804373 | 2.228291e-49 | -8.615850e-47 |
| Msa0271300 | Msa0695630 | 0.833097 | 6.484474e-56 | -8.615850e-47 |
| Msa0271660 | Msa0695630 | 0.803993 | 2.673363e-49 | -8.615850e-47 |
| Msa0272230 | Msa0695630 | 0.802119 | 6.525792e-49 | -8.615850e-47 |
| Msa0275560 | Msa0695630 | 0.844815 | 5.985555e-59 | -8.615850e-47 |
| Msa0275570 | Msa0695630 | 0.846469 | 2.130266e-59 | -8.615850e-47 |
| Msa0290800 | Msa0695630 | 0.811477 | 6.865172e-51 | -8.615850e-47 |
| Msa0304060 | Msa0695630 | -0.817576 | 3.069909e-52 | -8.615850e-47 |
| Msa0308300 | Msa0695630 | -0.805188 | 1.506107e-49 | -8.615850e-47 |
| Msa0309490 | Msa0695630 | -0.802108 | 6.559670e-49 | -8.615850e-47 |
| Msa0309670 | Msa0695630 | -0.822276 | 2.582609e-53 | -8.615850e-47 |
| Msa0309920 | Msa0695630 | 0.805262 | 1.453523e-49 | -8.615850e-47 |
| Msa0328870 | Msa0695630 | 0.811770 | 5.928746e-51 | -8.615850e-47 |
| Msa0330770 | Msa0695630 | -0.806179 | 9.329339e-50 | -8.615850e-47 |
| Msa0343230 | Msa0695630 | -0.821340 | 4.253369e-53 | -8.615850e-47 |
| Msa0349910 | Msa0695630 | 0.812687 | 3.740312e-51 | -8.615850e-47 |
| Msa0364030 | Msa0695630 | -0.813311 | 2.729921e-51 | -8.615850e-47 |
| Msa0491160 | Msa0695630 | -0.807594 | 4.684353e-50 | -8.615850e-47 |
| Msa0508160 | Msa0695630 | 0.827938 | 1.186709e-54 | -8.615850e-47 |
| Msa0511040 | Msa0695630 | -0.805736 | 1.155998e-49 | -8.615850e-47 |
| Msa0518580 | Msa0695630 | -0.808976 | 2.376995e-50 | -8.615850e-47 |
| Msa0522810 | Msa0695630 | -0.814638 | 1.391639e-51 | -8.615850e-47 |
| Msa0525460 | Msa0695630 | 0.801368 | 9.305615e-49 | -8.615850e-47 |
| Msa0527210 | Msa0695630 | -0.821559 | 3.786775e-53 | -8.615850e-47 |
| Msa0528830 | Msa0695630 | -0.822267 | 2.596073e-53 | -8.615850e-47 |
| Msa0533140 | Msa0695630 | -0.808825 | 2.560586e-50 | -8.615850e-47 |
| Msa0537210 | Msa0695630 | 0.802917 | 4.467688e-49 | -8.615850e-47 |
| Msa0538050 | Msa0695630 | -0.846609 | 1.950648e-59 | -8.615850e-47 |
| Msa0557910 | Msa0695630 | 0.808205 | 3.472290e-50 | -8.615850e-47 |
| Msa0560280 | Msa0695630 | 0.839041 | 2.008334e-57 | -8.615850e-47 |
| Msa0561420 | Msa0695630 | -0.818144 | 2.284896e-52 | -8.615850e-47 |
| Msa0563230 | Msa0695630 | -0.816058 | 6.725962e-52 | -8.615850e-47 |
| Msa0565150 | Msa0695630 | -0.814716 | 1.336992e-51 | -8.615850e-47 |
| Msa0565530 | Msa0695630 | -0.808710 | 2.709357e-50 | -8.615850e-47 |
| Msa0566930 | Msa0695630 | 0.818295 | 2.111492e-52 | -8.615850e-47 |
| Msa0567190 | Msa0695630 | -0.801012 | 1.100641e-48 | -8.615850e-47 |
| Msa0567490 | Msa0695630 | -0.805420 | 1.346537e-49 | -8.615850e-47 |
| Msa0568300 | Msa0695630 | -0.820082 | 8.275856e-53 | -8.615850e-47 |
| Msa0569100 | Msa0695630 | 0.830500 | 2.836331e-55 | -8.615850e-47 |
| Msa0569130 | Msa0695630 | 0.801444 | 8.978247e-49 | -8.615850e-47 |
| Msa0569540 | Msa0695630 | -0.818558 | 1.841608e-52 | -8.615850e-47 |
| Msa0570250 | Msa0695630 | -0.801765 | 7.714415e-49 | -8.615850e-47 |
| Msa0572730 | Msa0695630 | -0.815893 | 7.320891e-52 | -8.615850e-47 |
| Msa0573940 | Msa0695630 | -0.801637 | 8.195412e-49 | -8.615850e-47 |
| Msa0573970 | Msa0695630 | -0.832648 | 8.384682e-56 | -8.615850e-47 |
| Msa0576480 | Msa0695630 | -0.804339 | 2.265577e-49 | -8.615850e-47 |
| Msa0580210 | Msa0695630 | 0.864795 | 9.398978e-65 | -8.615850e-47 |
| Msa0582270 | Msa0695630 | -0.800775 | 1.230245e-48 | -8.615850e-47 |
| Msa0585720 | Msa0695630 | -0.843533 | 1.321394e-58 | -8.615850e-47 |
| Msa0589680 | Msa0695630 | -0.816017 | 6.867745e-52 | -8.615850e-47 |
| Msa0593600 | Msa0695630 | 0.815364 | 9.602499e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695630 | MtrunA17_Chr4g0047221 | 86.316 | 285 | 33 | 3 | 1 | 279 | 1 | 285 | 0.0 | 508 |
| Msa0695630 | MtrunA17_Chr4g0047231 | 84.914 | 232 | 32 | 2 | 51 | 279 | 1 | 232 | 4.16e-140 | 397 |
| Msa0695630 | MtrunA17_Chr2g0282301 | 50.862 | 232 | 105 | 6 | 51 | 279 | 1 | 226 | 1.49e-70 | 220 |
| Msa0695630 | MtrunA17_Chr2g0282311 | 45.333 | 225 | 114 | 3 | 56 | 279 | 10 | 226 | 1.42e-60 | 194 |
| Msa0695630 | MtrunA17_Chr4g0040171 | 52.055 | 146 | 66 | 2 | 135 | 279 | 61 | 203 | 5.71e-48 | 161 |
| Msa0695630 | MtrunA17_Chr5g0396281 | 30.460 | 174 | 106 | 4 | 116 | 279 | 12 | 180 | 1.27e-23 | 96.7 |
| Msa0695630 | MtrunA17_Chr7g0251511 | 30.000 | 110 | 71 | 2 | 170 | 279 | 110 | 213 | 1.82e-14 | 72.4 |
| Msa0695630 | MtrunA17_Chr4g0075591 | 30.081 | 123 | 66 | 2 | 157 | 279 | 93 | 195 | 3.30e-12 | 65.5 |
| Msa0695630 | MtrunA17_Chr1g0166241 | 29.762 | 84 | 53 | 2 | 196 | 279 | 153 | 230 | 4.89e-12 | 65.5 |
| Msa0695630 | MtrunA17_Chr4g0075611 | 30.328 | 122 | 65 | 3 | 158 | 279 | 112 | 213 | 1.40e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695630 | AT4G32480.1 | 41.237 | 194 | 99 | 3 | 86 | 279 | 21 | 199 | 3.74e-46 | 157 |
| Msa0695630 | AT2G20670.1 | 44.056 | 143 | 77 | 2 | 138 | 279 | 61 | 201 | 2.34e-40 | 142 |
| Msa0695630 | AT3G07350.1 | 37.634 | 93 | 58 | 0 | 187 | 279 | 126 | 218 | 3.73e-18 | 82.8 |
| Msa0695630 | AT2G39650.1 | 24.306 | 144 | 101 | 2 | 136 | 279 | 58 | 193 | 8.32e-15 | 73.2 |
| Msa0695630 | AT2G39650.2 | 25.758 | 132 | 93 | 1 | 148 | 279 | 5 | 131 | 1.06e-14 | 72.0 |
| Msa0695630 | AT4G14620.1 | 33.750 | 80 | 47 | 1 | 200 | 279 | 147 | 220 | 3.05e-13 | 69.3 |
| Msa0695630 | AT3G25240.1 | 32.632 | 95 | 63 | 1 | 186 | 279 | 105 | 199 | 6.46e-13 | 67.8 |
| Msa0695630 | AT2G38820.2 | 28.916 | 83 | 53 | 2 | 197 | 279 | 160 | 236 | 1.02e-11 | 64.7 |
Find 72 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAAGAGAAAGGAGATATT+AGG | 0.188794 | 4_4:-65260803 | Msa0695630:CDS |
| AATGGTTAGGTCCATTTAAA+AGG | 0.208758 | 4_4:-65260566 | Msa0695630:three_prime_UTR |
| TTCACTTTCATTGGGATATT+CGG | 0.239398 | 4_4:-65260529 | Msa0695630:three_prime_UTR |
| TGCACATGTAAGAGTGATTT+TGG | 0.255261 | 4_4:+65262403 | None:intergenic |
| GTTGTGTAAATTGTTATTAT+TGG | 0.258009 | 4_4:-65260414 | Msa0695630:three_prime_UTR |
| TGTTATTGGCCGAAAATTAA+AGG | 0.262213 | 4_4:+65260258 | None:intergenic |
| GTGCCATTTGTAATACTAAA+TGG | 0.269606 | 4_4:-65261488 | Msa0695630:CDS |
| TTTAACAAATTCACTTTCAT+TGG | 0.286998 | 4_4:-65260538 | Msa0695630:three_prime_UTR |
| GATGCCTTTGGCTTCTGCTT+TGG | 0.308657 | 4_4:+65260492 | None:intergenic |
| AAGGTGGAAACTTAGTTAAT+TGG | 0.322250 | 4_4:-65260389 | Msa0695630:three_prime_UTR |
| ATAAATACATGCAAGCTAAA+TGG | 0.328450 | 4_4:-65260584 | Msa0695630:three_prime_UTR |
| GAGGCAATGGGGTGTAATTA+AGG | 0.331668 | 4_4:+65260280 | None:intergenic |
| CAACAGAACTTGTTCTGTAT+AGG | 0.353289 | 4_4:+65261667 | None:intergenic |
| TTAACAGCAGTATGCACATT+AGG | 0.362716 | 4_4:+65260438 | None:intergenic |
| CAAAGAGAAAGGAGATATTA+GGG | 0.363806 | 4_4:-65260802 | Msa0695630:CDS |
| CCTCTATGTCCCGTGTTACT+AGG | 0.364191 | 4_4:-65262251 | Msa0695630:CDS |
| GTGTTGAATAATTATATTAT+CGG | 0.371885 | 4_4:+65260307 | None:intergenic |
| GATGATTGTGATGTGGGTTT+AGG | 0.377840 | 4_4:-65262135 | Msa0695630:CDS |
| ACGGTTAACATTGATGCCTT+TGG | 0.384691 | 4_4:+65260480 | None:intergenic |
| CATAATCAAGATTATGTGTA+TGG | 0.427742 | 4_4:-65260661 | Msa0695630:three_prime_UTR |
| TTTCTTGATGATTGTGATGT+GGG | 0.428946 | 4_4:-65262141 | Msa0695630:CDS |
| TTAACAAATTCACTTTCATT+GGG | 0.435046 | 4_4:-65260537 | Msa0695630:three_prime_UTR |
| ATTAGAATCAAACATAATCA+TGG | 0.438808 | 4_4:-65262280 | Msa0695630:CDS |
| TGAAGGTAACAATGATGAAA+AGG | 0.447535 | 4_4:-65262025 | Msa0695630:CDS |
| CAATATGCAGAAACAAATCT+TGG | 0.470143 | 4_4:-65262180 | Msa0695630:CDS |
| CGAAAATTAAAGGAGGCAAT+GGG | 0.471809 | 4_4:+65260268 | None:intergenic |
| TGTTGAATAATTATATTATC+GGG | 0.472954 | 4_4:+65260308 | None:intergenic |
| CTTTCGAGCACAATTTGAGA+TGG | 0.476688 | 4_4:-65260763 | Msa0695630:CDS |
| AATTTACATAATCTTCCATC+AGG | 0.482120 | 4_4:-65261462 | Msa0695630:intron |
| TGTCCATTTAGTATTACAAA+TGG | 0.482896 | 4_4:+65261485 | None:intergenic |
| GATCAATTACCTGCAAAAGC+TGG | 0.486219 | 4_4:+65261977 | None:intergenic |
| TCTAGCCAGCTTCAAAATGC+TGG | 0.497976 | 4_4:-65261519 | Msa0695630:CDS |
| AAAACAATGTCGACATGAGC+TGG | 0.499730 | 4_4:+65261554 | None:intergenic |
| GTTTCATCATGATAATCATA+TGG | 0.507505 | 4_4:-65262091 | Msa0695630:CDS |
| GTTACTAGGTATTTGCCTGT+TGG | 0.508009 | 4_4:-65262237 | Msa0695630:CDS |
| ATTGTTATTATTGGTCAAGG+TGG | 0.508175 | 4_4:-65260405 | Msa0695630:three_prime_UTR |
| TACATGCAAGCTAAATGGTT+AGG | 0.510493 | 4_4:-65260579 | Msa0695630:three_prime_UTR |
| TTTCGAGCACAATTTGAGAT+GGG | 0.513578 | 4_4:-65260762 | Msa0695630:CDS |
| GTTCTGTTGAAATAAGCATA+AGG | 0.516383 | 4_4:-65261653 | Msa0695630:CDS |
| CCGAAAATTAAAGGAGGCAA+TGG | 0.527133 | 4_4:+65260267 | None:intergenic |
| ATTTCTTGATGATTGTGATG+TGG | 0.528604 | 4_4:-65262142 | Msa0695630:CDS |
| AATTCCCTACGAAAACCAAC+AGG | 0.540238 | 4_4:+65262222 | None:intergenic |
| TCATGATAATCATATGGAGC+TGG | 0.540787 | 4_4:-65262085 | Msa0695630:CDS |
| TATAATACAAGCAAAGAGAA+AGG | 0.545101 | 4_4:-65260813 | Msa0695630:CDS |
| TTACCTGCAAAAGCTGGAGT+TGG | 0.546418 | 4_4:+65261983 | None:intergenic |
| AGAACTTGTTCTGTATAGGT+TGG | 0.552925 | 4_4:+65261671 | None:intergenic |
| AAACTGCCTGAGGTTTATGT+AGG | 0.557262 | 4_4:-65260705 | Msa0695630:CDS |
| TAAATTGTTATTATTGGTCA+AGG | 0.557955 | 4_4:-65260408 | Msa0695630:three_prime_UTR |
| GCTTATCCTACATAAACCTC+AGG | 0.563264 | 4_4:+65260699 | None:intergenic |
| TTAGAATCAAACATAATCAT+GGG | 0.573075 | 4_4:-65262279 | Msa0695630:CDS |
| AAATGTGAGAGGGTTAATGA+AGG | 0.598347 | 4_4:-65262042 | Msa0695630:CDS |
| CAGGCAAATACCTAGTAACA+CGG | 0.599782 | 4_4:+65262241 | None:intergenic |
| AAATTGGAGTGCATTTGCAG+TGG | 0.605257 | 4_4:-65261591 | Msa0695630:CDS |
| ACAAAATGCACATGGGACCA+TGG | 0.611544 | 4_4:-65260614 | Msa0695630:three_prime_UTR |
| AGATGATGATAAATGTGAGA+GGG | 0.614187 | 4_4:-65262052 | Msa0695630:CDS |
| AATATTCTCTAATAAATCAA+CGG | 0.615399 | 4_4:+65260461 | None:intergenic |
| AAGATGATGATAAATGTGAG+AGG | 0.616437 | 4_4:-65262053 | Msa0695630:CDS |
| CTAATGTTGTGTGTTGTGTG+TGG | 0.625625 | 4_4:+65262298 | None:intergenic |
| AAATCACTCTTACATGTGCA+CGG | 0.634646 | 4_4:-65262400 | Msa0695630:CDS |
| CAGGCAGTTTCCTCACAAGA+CGG | 0.640039 | 4_4:+65260718 | None:intergenic |
| CCTAGTAACACGGGACATAG+AGG | 0.641395 | 4_4:+65262251 | None:intergenic |
| TAGTCCAAAGCAGAAGCCAA+AGG | 0.641419 | 4_4:-65260496 | Msa0695630:three_prime_UTR |
| AATGGGGTGTAATTAAGGAA+AGG | 0.642678 | 4_4:+65260285 | None:intergenic |
| TTTCATTGGGATATTCGGAG+AGG | 0.645151 | 4_4:-65260524 | Msa0695630:three_prime_UTR |
| GAAAGAAAACAAAATGCACA+TGG | 0.645963 | 4_4:-65260622 | Msa0695630:three_prime_UTR |
| AAGACTATAACCGTCTTGTG+AGG | 0.648618 | 4_4:-65260728 | Msa0695630:CDS |
| TATTGGCCGAAAATTAAAGG+AGG | 0.648751 | 4_4:+65260261 | None:intergenic |
| TCTTGTGAGGAAACTGCCTG+AGG | 0.665039 | 4_4:-65260715 | Msa0695630:CDS |
| AAAGAAAACAAAATGCACAT+GGG | 0.675749 | 4_4:-65260621 | Msa0695630:three_prime_UTR |
| TGCATTTGCAGTGGACAGAG+TGG | 0.676752 | 4_4:-65261582 | Msa0695630:CDS |
| AGGCAAATACCTAGTAACAC+GGG | 0.687681 | 4_4:+65262242 | None:intergenic |
| GAAAATTAAAGGAGGCAATG+GGG | 0.709774 | 4_4:+65260269 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAGCTATTTTAATAATAA+TGG | - | chr4_4:65261476-65261495 | Msa0695630:CDS | 10.0% |
| !!! | TATTTTAATAATAATGGATT+AGG | - | chr4_4:65261482-65261501 | Msa0695630:CDS | 10.0% |
| !!! | TTTTTATAATCTATAACAAA+CGG | - | chr4_4:65261728-65261747 | Msa0695630:intron | 10.0% |
| !!! | ATTAGCTATTTTAATAATAA+TGG | - | chr4_4:65261476-65261495 | Msa0695630:CDS | 10.0% |
| !!! | TATTTTAATAATAATGGATT+AGG | - | chr4_4:65261482-65261501 | Msa0695630:CDS | 10.0% |
| !!! | TTTTTATAATCTATAACAAA+CGG | - | chr4_4:65261728-65261747 | Msa0695630:intron | 10.0% |
| !!! | ATGAAAAGGATAAAATTTTT+TGG | - | chr4_4:65260669-65260688 | Msa0695630:three_prime_UTR | 15.0% |
| !!! | TGAAAAGGATAAAATTTTTT+GGG | - | chr4_4:65260670-65260689 | Msa0695630:three_prime_UTR | 15.0% |
| !! | AAATATAGATCATAAATCAA+TGG | + | chr4_4:65260728-65260747 | None:intergenic | 15.0% |
| !!! | TATATTTTTTCAAAAGTAAC+AGG | - | chr4_4:65261518-65261537 | Msa0695630:CDS | 15.0% |
| !!! | CTATTTAATTTCAAAATGTA+AGG | + | chr4_4:65261755-65261774 | None:intergenic | 15.0% |
| !! | ATTATAATAGTGTAATTGTT+AGG | + | chr4_4:65261814-65261833 | None:intergenic | 15.0% |
| !! | AATATTCTCTAATAAATCAA+CGG | + | chr4_4:65262222-65262241 | None:intergenic | 15.0% |
| !! | TGTTGAATAATTATATTATC+GGG | + | chr4_4:65262375-65262394 | None:intergenic | 15.0% |
| !! | GTGTTGAATAATTATATTAT+CGG | + | chr4_4:65262376-65262395 | None:intergenic | 15.0% |
| !!! | ATGAAAAGGATAAAATTTTT+TGG | - | chr4_4:65260669-65260688 | Msa0695630:three_prime_UTR | 15.0% |
| !!! | TGAAAAGGATAAAATTTTTT+GGG | - | chr4_4:65260670-65260689 | Msa0695630:three_prime_UTR | 15.0% |
| !! | AAATATAGATCATAAATCAA+TGG | + | chr4_4:65260728-65260747 | None:intergenic | 15.0% |
| !!! | TATATTTTTTCAAAAGTAAC+AGG | - | chr4_4:65261518-65261537 | Msa0695630:CDS | 15.0% |
| !!! | CTATTTAATTTCAAAATGTA+AGG | + | chr4_4:65261755-65261774 | None:intergenic | 15.0% |
| !! | ATTATAATAGTGTAATTGTT+AGG | + | chr4_4:65261814-65261833 | None:intergenic | 15.0% |
| !! | AATATTCTCTAATAAATCAA+CGG | + | chr4_4:65262222-65262241 | None:intergenic | 15.0% |
| !! | TGTTGAATAATTATATTATC+GGG | + | chr4_4:65262375-65262394 | None:intergenic | 15.0% |
| !! | GTGTTGAATAATTATATTAT+CGG | + | chr4_4:65262376-65262395 | None:intergenic | 15.0% |
| !! | AGATTAGAAAAATCATCAAA+GGG | + | chr4_4:65260328-65260347 | None:intergenic | 20.0% |
| !! | AAGATTAGAAAAATCATCAA+AGG | + | chr4_4:65260329-65260348 | None:intergenic | 20.0% |
| !! | ATTAGAATCAAACATAATCA+TGG | - | chr4_4:65260400-65260419 | Msa0695630:three_prime_UTR | 20.0% |
| !! | TTAGAATCAAACATAATCAT+GGG | - | chr4_4:65260401-65260420 | Msa0695630:three_prime_UTR | 20.0% |
| !! | AAATGAATTATCACAAATCA+AGG | + | chr4_4:65260812-65260831 | None:intergenic | 20.0% |
| !! | TTACAACTTCATGATAAAAA+AGG | - | chr4_4:65260858-65260877 | Msa0695630:intron | 20.0% |
| !! | GAAGCAATTGAAAAAATAAA+TGG | - | chr4_4:65261062-65261081 | Msa0695630:intron | 20.0% |
| !! | AAAAATAAATGGATCGAAAT+TGG | - | chr4_4:65261073-65261092 | Msa0695630:intron | 20.0% |
| !! | AATTAAATCAAATTACCTGA+TGG | + | chr4_4:65261236-65261255 | None:intergenic | 20.0% |
| !!! | ATCTTTTTCATTTTTTGAGA+CGG | - | chr4_4:65261324-65261343 | Msa0695630:intron | 20.0% |
| !!! | ATAATAATGGATTAGGTATT+AGG | - | chr4_4:65261489-65261508 | Msa0695630:CDS | 20.0% |
| !!! | GAGTAACTTTTTTTAATAAG+AGG | + | chr4_4:65261545-65261564 | None:intergenic | 20.0% |
| !!! | TCTAAGATGTTATGTTTTTT+TGG | - | chr4_4:65261563-65261582 | Msa0695630:CDS | 20.0% |
| !! | AATCAAGAGGAAAAAATTTA+GGG | - | chr4_4:65261607-65261626 | Msa0695630:CDS | 20.0% |
| !!! | ATATTAAGTTGATCACAAAA+AGG | + | chr4_4:65261697-65261716 | None:intergenic | 20.0% |
| !! | TTACACTATTATAATTATGC+AGG | - | chr4_4:65261819-65261838 | Msa0695630:intron | 20.0% |
| !! | TACACTATTATAATTATGCA+GGG | - | chr4_4:65261820-65261839 | Msa0695630:intron | 20.0% |
| !! | TTTAACAAATTCACTTTCAT+TGG | - | chr4_4:65262142-65262161 | Msa0695630:CDS | 20.0% |
| !! | TTAACAAATTCACTTTCATT+GGG | - | chr4_4:65262143-65262162 | Msa0695630:CDS | 20.0% |
| !!! | GTTGTGTAAATTGTTATTAT+TGG | - | chr4_4:65262266-65262285 | Msa0695630:CDS | 20.0% |
| !!! | TAAATTGTTATTATTGGTCA+AGG | - | chr4_4:65262272-65262291 | Msa0695630:CDS | 20.0% |
| !!! | TTGGTTTTTTCTTTGTTTTT+TGG | - | chr4_4:65262310-65262329 | Msa0695630:CDS | 20.0% |
| !! | AGATTAGAAAAATCATCAAA+GGG | + | chr4_4:65260328-65260347 | None:intergenic | 20.0% |
| !! | AAGATTAGAAAAATCATCAA+AGG | + | chr4_4:65260329-65260348 | None:intergenic | 20.0% |
| !! | ATTAGAATCAAACATAATCA+TGG | - | chr4_4:65260400-65260419 | Msa0695630:three_prime_UTR | 20.0% |
| !! | TTAGAATCAAACATAATCAT+GGG | - | chr4_4:65260401-65260420 | Msa0695630:three_prime_UTR | 20.0% |
| !! | AAATGAATTATCACAAATCA+AGG | + | chr4_4:65260812-65260831 | None:intergenic | 20.0% |
| !! | TTACAACTTCATGATAAAAA+AGG | - | chr4_4:65260858-65260877 | Msa0695630:intron | 20.0% |
| !! | GAAGCAATTGAAAAAATAAA+TGG | - | chr4_4:65261062-65261081 | Msa0695630:intron | 20.0% |
| !! | AAAAATAAATGGATCGAAAT+TGG | - | chr4_4:65261073-65261092 | Msa0695630:intron | 20.0% |
| !! | AATTAAATCAAATTACCTGA+TGG | + | chr4_4:65261236-65261255 | None:intergenic | 20.0% |
| !!! | ATCTTTTTCATTTTTTGAGA+CGG | - | chr4_4:65261324-65261343 | Msa0695630:intron | 20.0% |
| !!! | ATAATAATGGATTAGGTATT+AGG | - | chr4_4:65261489-65261508 | Msa0695630:CDS | 20.0% |
| !!! | GAGTAACTTTTTTTAATAAG+AGG | + | chr4_4:65261545-65261564 | None:intergenic | 20.0% |
| !!! | TCTAAGATGTTATGTTTTTT+TGG | - | chr4_4:65261563-65261582 | Msa0695630:CDS | 20.0% |
| !! | AATCAAGAGGAAAAAATTTA+GGG | - | chr4_4:65261607-65261626 | Msa0695630:CDS | 20.0% |
| !!! | ATATTAAGTTGATCACAAAA+AGG | + | chr4_4:65261697-65261716 | None:intergenic | 20.0% |
| !! | TTACACTATTATAATTATGC+AGG | - | chr4_4:65261819-65261838 | Msa0695630:intron | 20.0% |
| !! | TACACTATTATAATTATGCA+GGG | - | chr4_4:65261820-65261839 | Msa0695630:intron | 20.0% |
| !! | TTTAACAAATTCACTTTCAT+TGG | - | chr4_4:65262142-65262161 | Msa0695630:CDS | 20.0% |
| !! | TTAACAAATTCACTTTCATT+GGG | - | chr4_4:65262143-65262162 | Msa0695630:CDS | 20.0% |
| !!! | GTTGTGTAAATTGTTATTAT+TGG | - | chr4_4:65262266-65262285 | Msa0695630:CDS | 20.0% |
| !!! | TAAATTGTTATTATTGGTCA+AGG | - | chr4_4:65262272-65262291 | Msa0695630:CDS | 20.0% |
| !!! | TTGGTTTTTTCTTTGTTTTT+TGG | - | chr4_4:65262310-65262329 | Msa0695630:CDS | 20.0% |
| ! | GTTTCATCATGATAATCATA+TGG | - | chr4_4:65260589-65260608 | Msa0695630:three_prime_UTR | 25.0% |
| !! | TATTTTCTTCTTGTGCTAAT+AGG | - | chr4_4:65260766-65260785 | Msa0695630:CDS | 25.0% |
| !!! | TTGTTAGCTTTATTTTTGAG+AGG | - | chr4_4:65260947-65260966 | Msa0695630:intron | 25.0% |
| ! | TGTCCATTTAGTATTACAAA+TGG | + | chr4_4:65261198-65261217 | None:intergenic | 25.0% |
| ! | AATTTACATAATCTTCCATC+AGG | - | chr4_4:65261218-65261237 | Msa0695630:intron | 25.0% |
| ! | GGTTAAAATATATCATGTGA+GGG | + | chr4_4:65261384-65261403 | None:intergenic | 25.0% |
| ! | AGGTTAAAATATATCATGTG+AGG | + | chr4_4:65261385-65261404 | None:intergenic | 25.0% |
| !!! | TTTTTTGAAAGGGACTTTTA+AGG | + | chr4_4:65261405-65261424 | None:intergenic | 25.0% |
| ! | TAATGATCCTGATTAATGAT+AGG | + | chr4_4:65261460-65261479 | None:intergenic | 25.0% |
| !!! | CTAAATTTTTTCCTCTTGAT+TGG | + | chr4_4:65261608-65261627 | None:intergenic | 25.0% |
| ! | CAATCAAGAGGAAAAAATTT+AGG | - | chr4_4:65261606-65261625 | Msa0695630:CDS | 25.0% |
| ! | ACACTATTATAATTATGCAG+GGG | - | chr4_4:65261821-65261840 | Msa0695630:intron | 25.0% |
| ! | TATAATACAAGCAAAGAGAA+AGG | - | chr4_4:65261867-65261886 | Msa0695630:intron | 25.0% |
| ! | CATAATCAAGATTATGTGTA+TGG | - | chr4_4:65262019-65262038 | Msa0695630:CDS | 25.0% |
| ! | AAAGAAAACAAAATGCACAT+GGG | - | chr4_4:65262059-65262078 | Msa0695630:CDS | 25.0% |
| !! | ATGTATTTATGTTTTCTCCA+TGG | + | chr4_4:65262086-65262105 | None:intergenic | 25.0% |
| ! | ATAAATACATGCAAGCTAAA+TGG | - | chr4_4:65262096-65262115 | Msa0695630:CDS | 25.0% |
| !!! | GTTAAAGTGTTCCTTTTAAA+TGG | + | chr4_4:65262128-65262147 | None:intergenic | 25.0% |
| ! | GTTTCATCATGATAATCATA+TGG | - | chr4_4:65260589-65260608 | Msa0695630:three_prime_UTR | 25.0% |
| !! | TATTTTCTTCTTGTGCTAAT+AGG | - | chr4_4:65260766-65260785 | Msa0695630:CDS | 25.0% |
| !!! | TTGTTAGCTTTATTTTTGAG+AGG | - | chr4_4:65260947-65260966 | Msa0695630:intron | 25.0% |
| ! | TGTCCATTTAGTATTACAAA+TGG | + | chr4_4:65261198-65261217 | None:intergenic | 25.0% |
| ! | AATTTACATAATCTTCCATC+AGG | - | chr4_4:65261218-65261237 | Msa0695630:intron | 25.0% |
| ! | GGTTAAAATATATCATGTGA+GGG | + | chr4_4:65261384-65261403 | None:intergenic | 25.0% |
| ! | AGGTTAAAATATATCATGTG+AGG | + | chr4_4:65261385-65261404 | None:intergenic | 25.0% |
| !!! | TTTTTTGAAAGGGACTTTTA+AGG | + | chr4_4:65261405-65261424 | None:intergenic | 25.0% |
| ! | TAATGATCCTGATTAATGAT+AGG | + | chr4_4:65261460-65261479 | None:intergenic | 25.0% |
| !!! | CTAAATTTTTTCCTCTTGAT+TGG | + | chr4_4:65261608-65261627 | None:intergenic | 25.0% |
| ! | CAATCAAGAGGAAAAAATTT+AGG | - | chr4_4:65261606-65261625 | Msa0695630:CDS | 25.0% |
| ! | ACACTATTATAATTATGCAG+GGG | - | chr4_4:65261821-65261840 | Msa0695630:intron | 25.0% |
| ! | TATAATACAAGCAAAGAGAA+AGG | - | chr4_4:65261867-65261886 | Msa0695630:intron | 25.0% |
| ! | CATAATCAAGATTATGTGTA+TGG | - | chr4_4:65262019-65262038 | Msa0695630:CDS | 25.0% |
| ! | AAAGAAAACAAAATGCACAT+GGG | - | chr4_4:65262059-65262078 | Msa0695630:CDS | 25.0% |
| !! | ATGTATTTATGTTTTCTCCA+TGG | + | chr4_4:65262086-65262105 | None:intergenic | 25.0% |
| ! | ATAAATACATGCAAGCTAAA+TGG | - | chr4_4:65262096-65262115 | Msa0695630:CDS | 25.0% |
| !!! | GTTAAAGTGTTCCTTTTAAA+TGG | + | chr4_4:65262128-65262147 | None:intergenic | 25.0% |
| CAATATGCAGAAACAAATCT+TGG | - | chr4_4:65260500-65260519 | Msa0695630:three_prime_UTR | 30.0% | |
| ! | ATTTCTTGATGATTGTGATG+TGG | - | chr4_4:65260538-65260557 | Msa0695630:three_prime_UTR | 30.0% |
| ! | TTTCTTGATGATTGTGATGT+GGG | - | chr4_4:65260539-65260558 | Msa0695630:three_prime_UTR | 30.0% |
| AAGATGATGATAAATGTGAG+AGG | - | chr4_4:65260627-65260646 | Msa0695630:three_prime_UTR | 30.0% | |
| AGATGATGATAAATGTGAGA+GGG | - | chr4_4:65260628-65260647 | Msa0695630:three_prime_UTR | 30.0% | |
| TGAAGGTAACAATGATGAAA+AGG | - | chr4_4:65260655-65260674 | Msa0695630:three_prime_UTR | 30.0% | |
| GTTCTGTTGAAATAAGCATA+AGG | - | chr4_4:65261027-65261046 | Msa0695630:intron | 30.0% | |
| !! | GTGCCATTTGTAATACTAAA+TGG | - | chr4_4:65261192-65261211 | Msa0695630:intron | 30.0% |
| !!! | CTTAGGGGTTTTTTTTGAAA+GGG | + | chr4_4:65261415-65261434 | None:intergenic | 30.0% |
| AGAAAGGTAAAAAAGCTTAG+GGG | + | chr4_4:65261430-65261449 | None:intergenic | 30.0% | |
| GAGAAAGGTAAAAAAGCTTA+GGG | + | chr4_4:65261431-65261450 | None:intergenic | 30.0% | |
| AGAGAAAGGTAAAAAAGCTT+AGG | + | chr4_4:65261432-65261451 | None:intergenic | 30.0% | |
| !! | TTTTTGGCCATGTAATTAAG+TGG | - | chr4_4:65261579-65261598 | Msa0695630:CDS | 30.0% |
| ! | TTTTGGCCATGTAATTAAGT+GGG | - | chr4_4:65261580-65261599 | Msa0695630:CDS | 30.0% |
| CAAAGAGAAAGGAGATATTA+GGG | - | chr4_4:65261878-65261897 | Msa0695630:intron | 30.0% | |
| GAAAGAAAACAAAATGCACA+TGG | - | chr4_4:65262058-65262077 | Msa0695630:CDS | 30.0% | |
| AATGGTTAGGTCCATTTAAA+AGG | - | chr4_4:65262114-65262133 | Msa0695630:CDS | 30.0% | |
| TTCACTTTCATTGGGATATT+CGG | - | chr4_4:65262151-65262170 | Msa0695630:CDS | 30.0% | |
| ! | ATTGTTATTATTGGTCAAGG+TGG | - | chr4_4:65262275-65262294 | Msa0695630:CDS | 30.0% |
| AAGGTGGAAACTTAGTTAAT+TGG | - | chr4_4:65262291-65262310 | Msa0695630:CDS | 30.0% | |
| CAATATGCAGAAACAAATCT+TGG | - | chr4_4:65260500-65260519 | Msa0695630:three_prime_UTR | 30.0% | |
| ! | ATTTCTTGATGATTGTGATG+TGG | - | chr4_4:65260538-65260557 | Msa0695630:three_prime_UTR | 30.0% |
| ! | TTTCTTGATGATTGTGATGT+GGG | - | chr4_4:65260539-65260558 | Msa0695630:three_prime_UTR | 30.0% |
| AAGATGATGATAAATGTGAG+AGG | - | chr4_4:65260627-65260646 | Msa0695630:three_prime_UTR | 30.0% | |
| AGATGATGATAAATGTGAGA+GGG | - | chr4_4:65260628-65260647 | Msa0695630:three_prime_UTR | 30.0% | |
| TGAAGGTAACAATGATGAAA+AGG | - | chr4_4:65260655-65260674 | Msa0695630:three_prime_UTR | 30.0% | |
| GTTCTGTTGAAATAAGCATA+AGG | - | chr4_4:65261027-65261046 | Msa0695630:intron | 30.0% | |
| !! | GTGCCATTTGTAATACTAAA+TGG | - | chr4_4:65261192-65261211 | Msa0695630:intron | 30.0% |
| !!! | CTTAGGGGTTTTTTTTGAAA+GGG | + | chr4_4:65261415-65261434 | None:intergenic | 30.0% |
| AGAAAGGTAAAAAAGCTTAG+GGG | + | chr4_4:65261430-65261449 | None:intergenic | 30.0% | |
| GAGAAAGGTAAAAAAGCTTA+GGG | + | chr4_4:65261431-65261450 | None:intergenic | 30.0% | |
| AGAGAAAGGTAAAAAAGCTT+AGG | + | chr4_4:65261432-65261451 | None:intergenic | 30.0% | |
| !! | TTTTTGGCCATGTAATTAAG+TGG | - | chr4_4:65261579-65261598 | Msa0695630:CDS | 30.0% |
| ! | TTTTGGCCATGTAATTAAGT+GGG | - | chr4_4:65261580-65261599 | Msa0695630:CDS | 30.0% |
| CAAAGAGAAAGGAGATATTA+GGG | - | chr4_4:65261878-65261897 | Msa0695630:intron | 30.0% | |
| GAAAGAAAACAAAATGCACA+TGG | - | chr4_4:65262058-65262077 | Msa0695630:CDS | 30.0% | |
| AATGGTTAGGTCCATTTAAA+AGG | - | chr4_4:65262114-65262133 | Msa0695630:CDS | 30.0% | |
| TTCACTTTCATTGGGATATT+CGG | - | chr4_4:65262151-65262170 | Msa0695630:CDS | 30.0% | |
| ! | ATTGTTATTATTGGTCAAGG+TGG | - | chr4_4:65262275-65262294 | Msa0695630:CDS | 30.0% |
| AAGGTGGAAACTTAGTTAAT+TGG | - | chr4_4:65262291-65262310 | Msa0695630:CDS | 30.0% | |
| ! | TGCACATGTAAGAGTGATTT+TGG | + | chr4_4:65260280-65260299 | None:intergenic | 35.0% |
| AAATCACTCTTACATGTGCA+CGG | - | chr4_4:65260280-65260299 | Msa0695630:three_prime_UTR | 35.0% | |
| TCATGATAATCATATGGAGC+TGG | - | chr4_4:65260595-65260614 | Msa0695630:three_prime_UTR | 35.0% | |
| AAATGTGAGAGGGTTAATGA+AGG | - | chr4_4:65260638-65260657 | Msa0695630:three_prime_UTR | 35.0% | |
| TGATTTCCCACTTGAACAAA+GGG | - | chr4_4:65260913-65260932 | Msa0695630:intron | 35.0% | |
| ! | AGAACTTGTTCTGTATAGGT+TGG | + | chr4_4:65261012-65261031 | None:intergenic | 35.0% |
| ! | CAACAGAACTTGTTCTGTAT+AGG | + | chr4_4:65261016-65261035 | None:intergenic | 35.0% |
| !!! | TAAAACCAGCATTTTGAAGC+TGG | + | chr4_4:65261169-65261188 | None:intergenic | 35.0% |
| !!! | GCTTAGGGGTTTTTTTTGAA+AGG | + | chr4_4:65261416-65261435 | None:intergenic | 35.0% |
| AATGATAGGACTACAGAGAA+AGG | + | chr4_4:65261446-65261465 | None:intergenic | 35.0% | |
| CTGTAGTCCTATCATTAATC+AGG | - | chr4_4:65261450-65261469 | Msa0695630:intron | 35.0% | |
| TTGGAACCCACTTAATTACA+TGG | + | chr4_4:65261589-65261608 | None:intergenic | 35.0% | |
| GCAAAGAGAAAGGAGATATT+AGG | - | chr4_4:65261877-65261896 | Msa0695630:intron | 35.0% | |
| ! | TTTCGAGCACAATTTGAGAT+GGG | - | chr4_4:65261918-65261937 | Msa0695630:intron | 35.0% |
| TACATGCAAGCTAAATGGTT+AGG | - | chr4_4:65262101-65262120 | Msa0695630:CDS | 35.0% | |
| TTAACAGCAGTATGCACATT+AGG | + | chr4_4:65262245-65262264 | None:intergenic | 35.0% | |
| AATGGGGTGTAATTAAGGAA+AGG | + | chr4_4:65262398-65262417 | None:intergenic | 35.0% | |
| GAAAATTAAAGGAGGCAATG+GGG | + | chr4_4:65262414-65262433 | None:intergenic | 35.0% | |
| ! | TGCACATGTAAGAGTGATTT+TGG | + | chr4_4:65260280-65260299 | None:intergenic | 35.0% |
| AAATCACTCTTACATGTGCA+CGG | - | chr4_4:65260280-65260299 | Msa0695630:three_prime_UTR | 35.0% | |
| TCATGATAATCATATGGAGC+TGG | - | chr4_4:65260595-65260614 | Msa0695630:three_prime_UTR | 35.0% | |
| AAATGTGAGAGGGTTAATGA+AGG | - | chr4_4:65260638-65260657 | Msa0695630:three_prime_UTR | 35.0% | |
| TGATTTCCCACTTGAACAAA+GGG | - | chr4_4:65260913-65260932 | Msa0695630:intron | 35.0% | |
| ! | AGAACTTGTTCTGTATAGGT+TGG | + | chr4_4:65261012-65261031 | None:intergenic | 35.0% |
| ! | CAACAGAACTTGTTCTGTAT+AGG | + | chr4_4:65261016-65261035 | None:intergenic | 35.0% |
| !!! | TAAAACCAGCATTTTGAAGC+TGG | + | chr4_4:65261169-65261188 | None:intergenic | 35.0% |
| !!! | GCTTAGGGGTTTTTTTTGAA+AGG | + | chr4_4:65261416-65261435 | None:intergenic | 35.0% |
| AATGATAGGACTACAGAGAA+AGG | + | chr4_4:65261446-65261465 | None:intergenic | 35.0% | |
| CTGTAGTCCTATCATTAATC+AGG | - | chr4_4:65261450-65261469 | Msa0695630:intron | 35.0% | |
| TTGGAACCCACTTAATTACA+TGG | + | chr4_4:65261589-65261608 | None:intergenic | 35.0% | |
| GCAAAGAGAAAGGAGATATT+AGG | - | chr4_4:65261877-65261896 | Msa0695630:intron | 35.0% | |
| ! | TTTCGAGCACAATTTGAGAT+GGG | - | chr4_4:65261918-65261937 | Msa0695630:intron | 35.0% |
| TACATGCAAGCTAAATGGTT+AGG | - | chr4_4:65262101-65262120 | Msa0695630:CDS | 35.0% | |
| TTAACAGCAGTATGCACATT+AGG | + | chr4_4:65262245-65262264 | None:intergenic | 35.0% | |
| AATGGGGTGTAATTAAGGAA+AGG | + | chr4_4:65262398-65262417 | None:intergenic | 35.0% | |
| GAAAATTAAAGGAGGCAATG+GGG | + | chr4_4:65262414-65262433 | None:intergenic | 35.0% | |
| CTAATGTTGTGTGTTGTGTG+TGG | + | chr4_4:65260385-65260404 | None:intergenic | 40.0% | |
| AGGCAAATACCTAGTAACAC+GGG | + | chr4_4:65260441-65260460 | None:intergenic | 40.0% | |
| CAGGCAAATACCTAGTAACA+CGG | + | chr4_4:65260442-65260461 | None:intergenic | 40.0% | |
| GTTACTAGGTATTTGCCTGT+TGG | - | chr4_4:65260443-65260462 | Msa0695630:three_prime_UTR | 40.0% | |
| !!! | ATTTGCCTGTTGGTTTTCGT+AGG | - | chr4_4:65260453-65260472 | Msa0695630:three_prime_UTR | 40.0% |
| !!! | TTTGCCTGTTGGTTTTCGTA+GGG | - | chr4_4:65260454-65260473 | Msa0695630:three_prime_UTR | 40.0% |
| AATTCCCTACGAAAACCAAC+AGG | + | chr4_4:65260461-65260480 | None:intergenic | 40.0% | |
| GATGATTGTGATGTGGGTTT+AGG | - | chr4_4:65260545-65260564 | Msa0695630:three_prime_UTR | 40.0% | |
| GATCAATTACCTGCAAAAGC+TGG | + | chr4_4:65260706-65260725 | None:intergenic | 40.0% | |
| GTGATTTCCCACTTGAACAA+AGG | - | chr4_4:65260912-65260931 | Msa0695630:intron | 40.0% | |
| TTACGACCCTTTGTTCAAGT+GGG | + | chr4_4:65260922-65260941 | None:intergenic | 40.0% | |
| ATTACGACCCTTTGTTCAAG+TGG | + | chr4_4:65260923-65260942 | None:intergenic | 40.0% | |
| AAATTGGAGTGCATTTGCAG+TGG | - | chr4_4:65261089-65261108 | Msa0695630:intron | 40.0% | |
| AAAACAATGTCGACATGAGC+TGG | + | chr4_4:65261129-65261148 | None:intergenic | 40.0% | |
| ! | TTAAGTGGGTTCCAATCAAG+AGG | - | chr4_4:65261594-65261613 | Msa0695630:CDS | 40.0% |
| CTTTCGAGCACAATTTGAGA+TGG | - | chr4_4:65261917-65261936 | Msa0695630:intron | 40.0% | |
| AAGACTATAACCGTCTTGTG+AGG | - | chr4_4:65261952-65261971 | Msa0695630:intron | 40.0% | |
| AAACTGCCTGAGGTTTATGT+AGG | - | chr4_4:65261975-65261994 | Msa0695630:intron | 40.0% | |
| GCTTATCCTACATAAACCTC+AGG | + | chr4_4:65261984-65262003 | None:intergenic | 40.0% | |
| TTTCATTGGGATATTCGGAG+AGG | - | chr4_4:65262156-65262175 | Msa0695630:CDS | 40.0% | |
| ACGGTTAACATTGATGCCTT+TGG | + | chr4_4:65262203-65262222 | None:intergenic | 40.0% | |
| CTAATGTTGTGTGTTGTGTG+TGG | + | chr4_4:65260385-65260404 | None:intergenic | 40.0% | |
| AGGCAAATACCTAGTAACAC+GGG | + | chr4_4:65260441-65260460 | None:intergenic | 40.0% | |
| CAGGCAAATACCTAGTAACA+CGG | + | chr4_4:65260442-65260461 | None:intergenic | 40.0% | |
| GTTACTAGGTATTTGCCTGT+TGG | - | chr4_4:65260443-65260462 | Msa0695630:three_prime_UTR | 40.0% | |
| !!! | ATTTGCCTGTTGGTTTTCGT+AGG | - | chr4_4:65260453-65260472 | Msa0695630:three_prime_UTR | 40.0% |
| !!! | TTTGCCTGTTGGTTTTCGTA+GGG | - | chr4_4:65260454-65260473 | Msa0695630:three_prime_UTR | 40.0% |
| AATTCCCTACGAAAACCAAC+AGG | + | chr4_4:65260461-65260480 | None:intergenic | 40.0% | |
| GATGATTGTGATGTGGGTTT+AGG | - | chr4_4:65260545-65260564 | Msa0695630:three_prime_UTR | 40.0% | |
| GATCAATTACCTGCAAAAGC+TGG | + | chr4_4:65260706-65260725 | None:intergenic | 40.0% | |
| GTGATTTCCCACTTGAACAA+AGG | - | chr4_4:65260912-65260931 | Msa0695630:intron | 40.0% | |
| TTACGACCCTTTGTTCAAGT+GGG | + | chr4_4:65260922-65260941 | None:intergenic | 40.0% | |
| ATTACGACCCTTTGTTCAAG+TGG | + | chr4_4:65260923-65260942 | None:intergenic | 40.0% | |
| AAATTGGAGTGCATTTGCAG+TGG | - | chr4_4:65261089-65261108 | Msa0695630:intron | 40.0% | |
| AAAACAATGTCGACATGAGC+TGG | + | chr4_4:65261129-65261148 | None:intergenic | 40.0% | |
| ! | TTAAGTGGGTTCCAATCAAG+AGG | - | chr4_4:65261594-65261613 | Msa0695630:CDS | 40.0% |
| CTTTCGAGCACAATTTGAGA+TGG | - | chr4_4:65261917-65261936 | Msa0695630:intron | 40.0% | |
| AAGACTATAACCGTCTTGTG+AGG | - | chr4_4:65261952-65261971 | Msa0695630:intron | 40.0% | |
| AAACTGCCTGAGGTTTATGT+AGG | - | chr4_4:65261975-65261994 | Msa0695630:intron | 40.0% | |
| GCTTATCCTACATAAACCTC+AGG | + | chr4_4:65261984-65262003 | None:intergenic | 40.0% | |
| TTTCATTGGGATATTCGGAG+AGG | - | chr4_4:65262156-65262175 | Msa0695630:CDS | 40.0% | |
| ACGGTTAACATTGATGCCTT+TGG | + | chr4_4:65262203-65262222 | None:intergenic | 40.0% | |
| TTACCTGCAAAAGCTGGAGT+TGG | + | chr4_4:65260700-65260719 | None:intergenic | 45.0% | |
| TCTAGCCAGCTTCAAAATGC+TGG | - | chr4_4:65261161-65261180 | Msa0695630:intron | 45.0% | |
| !! | TGCAGGGGAGCATACATTTT+TGG | - | chr4_4:65261836-65261855 | Msa0695630:intron | 45.0% |
| ACAAAATGCACATGGGACCA+TGG | - | chr4_4:65262066-65262085 | Msa0695630:CDS | 45.0% | |
| TAGTCCAAAGCAGAAGCCAA+AGG | - | chr4_4:65262184-65262203 | Msa0695630:CDS | 45.0% | |
| GAGGCAATGGGGTGTAATTA+AGG | + | chr4_4:65262403-65262422 | None:intergenic | 45.0% | |
| TTACCTGCAAAAGCTGGAGT+TGG | + | chr4_4:65260700-65260719 | None:intergenic | 45.0% | |
| TCTAGCCAGCTTCAAAATGC+TGG | - | chr4_4:65261161-65261180 | Msa0695630:intron | 45.0% | |
| !! | TGCAGGGGAGCATACATTTT+TGG | - | chr4_4:65261836-65261855 | Msa0695630:intron | 45.0% |
| ACAAAATGCACATGGGACCA+TGG | - | chr4_4:65262066-65262085 | Msa0695630:CDS | 45.0% | |
| TAGTCCAAAGCAGAAGCCAA+AGG | - | chr4_4:65262184-65262203 | Msa0695630:CDS | 45.0% | |
| GAGGCAATGGGGTGTAATTA+AGG | + | chr4_4:65262403-65262422 | None:intergenic | 45.0% | |
| !! | AATAATAAAAGTAAAATTAA+AGG | + | chr4_4:65260839-65260858 | None:intergenic | 5.0% |
| !! | AATAATAAAAGTAAAATTAA+AGG | + | chr4_4:65260839-65260858 | None:intergenic | 5.0% |
| CCTAGTAACACGGGACATAG+AGG | + | chr4_4:65260432-65260451 | None:intergenic | 50.0% | |
| ! | CCTCTATGTCCCGTGTTACT+AGG | - | chr4_4:65260429-65260448 | Msa0695630:three_prime_UTR | 50.0% |
| ! | CAACCAACTCCAGCTTTTGC+AGG | - | chr4_4:65260694-65260713 | Msa0695630:exon | 50.0% |
| TGCATTTGCAGTGGACAGAG+TGG | - | chr4_4:65261098-65261117 | Msa0695630:intron | 50.0% | |
| CAGGCAGTTTCCTCACAAGA+CGG | + | chr4_4:65261965-65261984 | None:intergenic | 50.0% | |
| TCTTGTGAGGAAACTGCCTG+AGG | - | chr4_4:65261965-65261984 | Msa0695630:intron | 50.0% | |
| ! | GATGCCTTTGGCTTCTGCTT+TGG | + | chr4_4:65262191-65262210 | None:intergenic | 50.0% |
| CCTAGTAACACGGGACATAG+AGG | + | chr4_4:65260432-65260451 | None:intergenic | 50.0% | |
| ! | CCTCTATGTCCCGTGTTACT+AGG | - | chr4_4:65260429-65260448 | Msa0695630:three_prime_UTR | 50.0% |
| ! | CAACCAACTCCAGCTTTTGC+AGG | - | chr4_4:65260694-65260713 | Msa0695630:exon | 50.0% |
| TGCATTTGCAGTGGACAGAG+TGG | - | chr4_4:65261098-65261117 | Msa0695630:intron | 50.0% | |
| CAGGCAGTTTCCTCACAAGA+CGG | + | chr4_4:65261965-65261984 | None:intergenic | 50.0% | |
| TCTTGTGAGGAAACTGCCTG+AGG | - | chr4_4:65261965-65261984 | Msa0695630:intron | 50.0% | |
| ! | GATGCCTTTGGCTTCTGCTT+TGG | + | chr4_4:65262191-65262210 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 65260269 | 65262433 | 65260269 | ID=Msa0695630;Name=Msa0695630 |
| chr4_4 | mRNA | 65260269 | 65262433 | 65260269 | ID=Msa0695630-mRNA-1;Parent=Msa0695630;Name=Msa0695630-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|1|0.66|1|1|1|3|432|279 |
| chr4_4 | exon | 65260269 | 65260861 | 65260269 | ID=Msa0695630-mRNA-1:exon:18787;Parent=Msa0695630-mRNA-1 |
| chr4_4 | exon | 65261463 | 65261694 | 65261463 | ID=Msa0695630-mRNA-1:exon:18786;Parent=Msa0695630-mRNA-1 |
| chr4_4 | exon | 65261987 | 65262433 | 65261987 | ID=Msa0695630-mRNA-1:exon:18785;Parent=Msa0695630-mRNA-1 |
| chr4_4 | CDS | 65261987 | 65262433 | 65261987 | ID=Msa0695630-mRNA-1:cds;Parent=Msa0695630-mRNA-1 |
| chr4_4 | CDS | 65261463 | 65261694 | 65261463 | ID=Msa0695630-mRNA-1:cds;Parent=Msa0695630-mRNA-1 |
| chr4_4 | CDS | 65260701 | 65260861 | 65260701 | ID=Msa0695630-mRNA-1:cds;Parent=Msa0695630-mRNA-1 |
| chr4_4 | three_prime_UTR | 65260269 | 65260700 | 65260269 | ID=Msa0695630-mRNA-1:three_prime_utr;Parent=Msa0695630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
