AlfalfaGEDB | Msa1041650

M. sativa cultivar zhongmu-4 / Msa1041650

KEGG: K00430
GO: GO:0001101 GO:0003674 GO:0003824 GO:0004601 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005911 GO:0006950 GO:0006970 GO:0006972 GO:0008150 GO:0008152 GO:0009266 GO:0009269 GO:0009409 GO:0009414 GO:0009415 GO:0009505 GO:0009506 GO:0009628 GO:0009636 GO:0009651 GO:0009664 GO:0009987 GO:0010035 GO:0012505 GO:0016043 GO:0016209 GO:0016491 GO:0016684 GO:0030054 GO:0030312 GO:0042221 GO:0042538 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0050896 GO:0051716 GO:0055044 GO:0055114 GO:0070887 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0071944 GO:0097237 GO:0098754 GO:0098869 GO:1901700 GO:1990748
PFAM: PF00141.26

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1041650	KEH24352.1	88.685	327	10	2	1	321	1	306	0.0	588

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1041650	sp\|O23044\|PER3_ARATH	51.385	325	127	7	8	321	7	311	4.68e-104	310

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1041650	G8A179	88.685	327	10	2	1	321	1	306	0.0	588

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0010150	Msa1041650	0.807021	6.195262e-50	-8.615850e-47
Msa0059880	Msa1041650	0.826367	2.820518e-54	-8.615850e-47
Msa0079830	Msa1041650	0.811493	6.809727e-51	-8.615850e-47
Msa0605400	Msa1041650	0.802157	6.410867e-49	-8.615850e-47
Msa0623980	Msa1041650	0.803451	3.464269e-49	-8.615850e-47
Msa0631700	Msa1041650	0.805952	1.041012e-49	-8.615850e-47
Msa0643840	Msa1041650	0.813329	2.705014e-51	-8.615850e-47
Msa0670360	Msa1041650	0.807112	5.924758e-50	-8.615850e-47
Msa0671640	Msa1041650	0.807104	5.948074e-50	-8.615850e-47
Msa0695630	Msa1041650	0.803532	3.332403e-49	-8.615850e-47
Msa0705520	Msa1041650	0.844293	8.270366e-59	-8.615850e-47
Msa0711260	Msa1041650	0.817644	2.963908e-52	-8.615850e-47
Msa0751960	Msa1041650	0.808973	2.380119e-50	-8.615850e-47
Msa0777070	Msa1041650	0.802839	4.636737e-49	-8.615850e-47
Msa0787860	Msa1041650	0.804792	1.822469e-49	-8.615850e-47
Msa0806930	Msa1041650	0.802758	4.819603e-49	-8.615850e-47
Msa0814160	Msa1041650	0.832512	9.060806e-56	-8.615850e-47
Msa0143280	Msa1041650	-0.800066	1.715873e-48	-8.615850e-47
Msa0150910	Msa1041650	0.824296	8.716158e-54	-8.615850e-47
Msa0190670	Msa1041650	0.819127	1.366911e-52	-8.615850e-47
Msa0374040	Msa1041650	0.806713	7.197659e-50	-8.615850e-47
Msa0985700	Msa1041650	0.808047	3.752921e-50	-8.615850e-47
Msa1006170	Msa1041650	0.803204	3.896950e-49	-8.615850e-47
Msa1024350	Msa1041650	0.821299	4.347442e-53	-8.615850e-47
Msa1041630	Msa1041650	0.803305	3.714390e-49	-8.615850e-47
Msa1041650	Msa1087370	0.814110	1.820242e-51	-8.615850e-47
Msa1041650	Msa1087380	0.809583	1.760947e-50	-8.615850e-47
Msa1041650	Msa1090150	0.839136	1.897962e-57	-8.615850e-47
Msa1041650	Msa1109880	0.810184	1.307388e-50	-8.615850e-47
Msa1041650	Msa1109890	0.813430	2.570580e-51	-8.615850e-47
Msa1041650	Msa1125450	-0.802236	6.173033e-49	-8.615850e-47
Msa1041650	Msa1166530	0.820406	6.976394e-53	-8.615850e-47
Msa1041650	Msa1166550	0.982182	1.942734e-154	-8.615850e-47
Msa1041650	Msa1214960	0.812711	3.695814e-51	-8.615850e-47
Msa1041650	Msa1357750	0.805837	1.100744e-49	-8.615850e-47
Msa1041650	Msa1357860	0.824517	7.735264e-54	-8.615850e-47
Msa1041650	Msa1402390	0.810520	1.106555e-50	-8.615850e-47
Msa1041650	Msa1407670	0.808512	2.986986e-50	-8.615850e-47
Msa1041650	Msa1449770	0.812671	3.769825e-51	-8.615850e-47
Msa1041650	Msa1459660	0.820480	6.710005e-53	-8.615850e-47
Msa0252930	Msa1041650	0.807933	3.967095e-50	-8.615850e-47
Msa0274250	Msa1041650	0.811673	6.224738e-51	-8.615850e-47
Msa0535570	Msa1041650	0.808192	3.494142e-50	-8.615850e-47
Msa0569100	Msa1041650	0.823538	1.312432e-53	-8.615850e-47
Msa0569130	Msa1041650	0.812606	3.895530e-51	-8.615850e-47
Msa0580210	Msa1041650	0.851644	7.759068e-61	-8.615850e-47
Msa0854840	Msa1041650	0.824146	9.454814e-54	-8.615850e-47
Msa0861400	Msa1041650	-0.801810	7.551817e-49	-8.615850e-47
Msa0883640	Msa1041650	0.807539	4.810603e-50	-8.615850e-47
Msa0910830	Msa1041650	0.809081	2.256387e-50	-8.615850e-47
Msa0960090	Msa1041650	0.809315	2.010862e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1041650	MtrunA17_Chr7g0268501	88.685	327	10	2	1	321	1	306	0.0	588
Msa1041650	MtrunA17_Chr7g0268521	88.685	327	10	2	1	321	1	306	0.0	588
Msa1041650	MtrunA17_Chr4g0024121	50.453	331	131	6	1	319	1	310	1.45e-106	314
Msa1041650	MtrunA17_Chr2g0322861	49.405	336	130	8	1	321	62	372	2.91e-102	305
Msa1041650	MtrunA17_Chr8g0371381	42.532	308	146	5	19	317	20	305	3.78e-82	251
Msa1041650	MtrunA17_Chr5g0405991	43.533	317	144	7	12	317	10	302	6.40e-80	245
Msa1041650	MtrunA17_Chr1g0164891	46.405	306	131	7	29	321	93	378	1.52e-78	244
Msa1041650	MtrunA17_Chr1g0157051	44.000	275	142	4	11	274	7	280	7.79e-77	238
Msa1041650	MtrunA17_Chr2g0279041	43.046	302	156	4	22	321	24	311	1.47e-76	237
Msa1041650	MtrunA17_Chr3g0128061	42.025	326	158	7	6	321	8	312	5.90e-76	236
Msa1041650	MtrunA17_Chr1g0204011	39.557	316	161	5	11	318	14	307	1.15e-74	232
Msa1041650	MtrunA17_Chr1g0175561	40.938	320	170	8	8	321	6	312	2.80e-74	231
Msa1041650	MtrunA17_Chr2g0292241	40.060	332	163	6	7	321	4	316	3.68e-73	229
Msa1041650	MtrunA17_Chr2g0292211	41.250	320	168	6	6	321	24	327	4.38e-73	229
Msa1041650	MtrunA17_Chr7g0258811	40.062	322	174	7	4	320	49	356	1.16e-72	229
Msa1041650	MtrunA17_Chr6g0460711	42.712	295	154	6	7	291	3	292	2.44e-71	224
Msa1041650	MtrunA17_Chr4g0063671	37.994	329	171	8	1	321	3	306	4.70e-71	223
Msa1041650	MtrunA17_Chr5g0402581	41.486	323	156	9	11	321	11	312	6.60e-71	223
Msa1041650	MtrunA17_Chr2g0292271	40.683	322	160	6	12	321	14	316	1.68e-70	223
Msa1041650	MtrunA17_Chr2g0291751	38.344	326	172	5	6	321	10	316	1.85e-70	223
Msa1041650	MtrunA17_Chr2g0292251	40.705	312	156	5	20	321	23	315	6.98e-70	221
Msa1041650	MtrunA17_Chr4g0070951	38.390	323	169	6	5	318	11	312	1.81e-69	219
Msa1041650	MtrunA17_Chr2g0292261	39.385	325	168	5	7	321	11	316	5.30e-69	219
Msa1041650	MtrunA17_Chr2g0292181	38.485	330	180	7	2	321	9	325	9.29e-69	218
Msa1041650	MtrunA17_Chr5g0404721	40.694	317	158	5	15	321	20	316	4.40e-68	216
Msa1041650	MtrunA17_Chr5g0402571	40.062	322	160	10	11	320	11	311	1.07e-67	214
Msa1041650	MtrunA17_Chr2g0292111	39.077	325	169	5	7	321	11	316	1.27e-67	215
Msa1041650	MtrunA17_Chr8g0372601	39.937	318	161	5	14	321	19	316	2.95e-67	213
Msa1041650	MtrunA17_Chr6g0477071	37.654	324	162	10	5	319	34	326	5.31e-67	213
Msa1041650	MtrunA17_Chr1g0188431	37.538	325	164	7	3	319	18	311	3.78e-66	211
Msa1041650	MtrunA17_Chr1g0194271	36.232	345	176	7	1	321	2	326	9.72e-66	210
Msa1041650	MtrunA17_Chr1g0194151	39.228	311	156	6	24	321	29	319	2.38e-65	209
Msa1041650	MtrunA17_Chr2g0292151	38.462	325	171	5	7	321	11	316	4.25e-65	209
Msa1041650	MtrunA17_Chr7g0254201	39.465	299	157	7	25	320	20	297	5.08e-65	207
Msa1041650	MtrunA17_Chr2g0292101	38.650	326	170	6	7	321	6	312	7.25e-65	208
Msa1041650	MtrunA17_Chr4g0068621	41.639	305	156	8	22	321	35	322	1.17e-64	207
Msa1041650	MtrunA17_Chr2g0292091	38.154	325	171	6	8	321	6	311	2.38e-64	206
Msa1041650	MtrunA17_Chr4g0046131	39.145	304	162	7	25	320	42	330	5.81e-64	206
Msa1041650	MtrunA17_Chr2g0320071	38.511	309	166	6	3	302	5	298	1.53e-63	203
Msa1041650	MtrunA17_Chr8g0364291	39.130	299	159	6	28	319	26	308	1.70e-63	204
Msa1041650	MtrunA17_Chr1g0148021	44.681	282	140	8	6	274	9	287	2.57e-63	203
Msa1041650	MtrunA17_Chr2g0296621	40.878	296	151	6	28	321	53	326	4.35e-63	203
Msa1041650	MtrunA17_Chr4g0053871	43.902	287	141	8	2	274	3	283	1.47e-62	201
Msa1041650	MtrunA17_Chr3g0129051	37.461	323	164	6	10	321	13	308	1.75e-62	201
Msa1041650	MtrunA17_Chr1g0213061	36.392	316	175	7	11	321	13	307	1.02e-61	199
Msa1041650	MtrunA17_Chr7g0225221	37.273	330	171	7	2	321	3	306	1.05e-61	199
Msa1041650	MtrunA17_Chr7g0254231	41.221	262	137	5	23	276	20	272	2.21e-61	198
Msa1041650	MtrunA17_Chr2g0299691	39.731	297	161	7	29	320	60	343	2.27e-61	199
Msa1041650	MtrunA17_Chr3g0114451	37.195	328	175	8	1	321	1	304	1.72e-60	196
Msa1041650	MtrunA17_Chr2g0320101	37.377	305	169	5	7	302	7	298	1.33e-59	193
Msa1041650	MtrunA17_Chr4g0076211	40.339	295	151	7	30	321	46	318	4.20e-59	192
Msa1041650	MtrunA17_Chr2g0292291	38.019	313	164	6	20	321	25	318	4.20e-59	193
Msa1041650	MtrunA17_Chr4g0013721	36.688	308	165	6	20	318	95	381	4.53e-59	195
Msa1041650	MtrunA17_Chr2g0279061	42.745	255	130	4	69	321	12	252	1.26e-58	189
Msa1041650	MtrunA17_Chr4g0072091	42.748	262	135	5	25	274	24	282	2.59e-58	190
Msa1041650	MtrunA17_Chr5g0401431	37.538	333	171	9	2	319	3	313	3.92e-58	190
Msa1041650	MtrunA17_Chr1g0197411	35.455	330	183	8	5	321	4	316	4.77e-57	187
Msa1041650	MtrunA17_Chr2g0320091	38.989	277	152	5	7	273	7	276	6.27e-57	186
Msa1041650	MtrunA17_Chr2g0320051	38.951	267	147	4	7	264	7	266	1.68e-56	185
Msa1041650	MtrunA17_Chr4g0043391	35.976	328	178	9	2	321	7	310	1.94e-56	185
Msa1041650	MtrunA17_Chr2g0320061	35.535	318	182	7	7	321	7	304	6.71e-56	184
Msa1041650	MtrunA17_Chr5g0400331	38.511	309	161	7	25	321	26	317	1.36e-55	183
Msa1041650	MtrunA17_Chr4g0013821	35.314	303	166	6	25	318	28	309	2.85e-55	183
Msa1041650	MtrunA17_Chr5g0432331	36.391	327	182	7	1	321	32	338	1.02e-54	182
Msa1041650	MtrunA17_Chr7g0244451	37.063	286	163	5	1	277	1	278	1.50e-54	180
Msa1041650	MtrunA17_Chr5g0432351	36.170	329	180	10	1	321	1	307	2.68e-54	180
Msa1041650	MtrunA17_Chr1g0155611	37.338	308	162	6	25	321	46	333	4.42e-54	180
Msa1041650	MtrunA17_Chr5g0432441	35.890	326	173	11	10	321	9	312	8.29e-54	179
Msa1041650	MtrunA17_Chr7g0224371	34.663	326	184	7	1	321	7	308	1.02e-53	178
Msa1041650	MtrunA17_Chr4g0038171	36.688	308	160	8	25	321	24	307	1.15e-53	178
Msa1041650	MtrunA17_Chr5g0438021	35.780	327	181	9	1	321	8	311	1.31e-53	178
Msa1041650	MtrunA17_Chr2g0320031	35.691	311	176	7	3	303	5	301	3.08e-53	177
Msa1041650	MtrunA17_Chr2g0329641	36.066	305	168	7	25	321	36	321	4.00e-53	177
Msa1041650	MtrunA17_Chr5g0432341	35.224	335	175	10	1	321	1	307	5.47e-53	176
Msa1041650	MtrunA17_Chr4g0013201	35.430	302	167	7	25	321	46	324	1.13e-52	176
Msa1041650	MtrunA17_Chr7g0244461	35.312	320	168	9	12	321	8	298	1.15e-52	175
Msa1041650	MtrunA17_Chr3g0107881	35.045	331	172	9	5	321	9	310	1.17e-52	176
Msa1041650	MtrunA17_Chr4g0013171	35.197	304	169	8	24	321	26	307	1.63e-52	175
Msa1041650	MtrunA17_Chr3g0136751	40.283	283	151	6	2	273	5	280	2.02e-52	175
Msa1041650	MtrunA17_Chr3g0129061	35.913	323	169	6	10	321	13	308	2.51e-52	175
Msa1041650	MtrunA17_Chr2g0316481	36.455	299	160	6	19	313	70	342	2.78e-52	177
Msa1041650	MtrunA17_Chr4g0013181	35.948	306	156	8	28	321	62	339	2.92e-52	175
Msa1041650	MtrunA17_Chr4g0013191	34.118	340	178	8	7	321	8	326	4.66e-52	174
Msa1041650	MtrunA17_Chr2g0316831	34.218	339	171	8	19	321	106	428	6.23e-52	177
Msa1041650	MtrunA17_Chr4g0038161	33.636	330	184	8	3	321	1	306	7.71e-52	173
Msa1041650	MtrunA17_Chr2g0316791	36.455	299	160	5	19	313	70	342	7.76e-52	176
Msa1041650	MtrunA17_Chr3g0106901	35.312	320	180	6	5	321	14	309	1.03e-51	173
Msa1041650	MtrunA17_Chr2g0278671	36.482	307	164	8	25	321	24	309	1.26e-51	173
Msa1041650	MtrunA17_Chr3g0106921	34.268	321	181	9	8	321	9	306	1.79e-51	172
Msa1041650	MtrunA17_Chr4g0038151	33.535	331	184	9	3	321	1	307	1.98e-51	172
Msa1041650	MtrunA17_Chr3g0129041	38.989	277	151	5	10	275	13	282	8.78e-51	171
Msa1041650	MtrunA17_Chr2g0316191	42.056	214	120	2	19	228	70	283	1.21e-50	172
Msa1041650	MtrunA17_Chr5g0413051	33.654	312	179	8	21	321	69	363	1.81e-49	169
Msa1041650	MtrunA17_Chr2g0311251	34.985	323	189	8	19	321	5	326	2.27e-49	167
Msa1041650	MtrunA17_Chr2g0311241	32.967	364	182	9	19	321	54	416	5.43e-49	169
Msa1041650	MtrunA17_Chr6g0467251	33.030	330	178	11	6	321	14	314	9.10e-49	166
Msa1041650	MtrunA17_Chr6g0451571	35.583	326	179	11	5	321	17	320	3.18e-48	164
Msa1041650	MtrunA17_Chr6g0467161	33.033	333	177	10	6	321	19	322	1.34e-46	160
Msa1041650	MtrunA17_Chr5g0421411	36.823	277	152	10	49	317	5	266	1.85e-46	158
Msa1041650	MtrunA17_Chr6g0467121	33.939	330	177	12	5	320	46	348	7.53e-46	159
Msa1041650	MtrunA17_Chr2g0316811	38.428	229	122	3	19	228	44	272	1.09e-45	157
Msa1041650	MtrunA17_Chr4g0075241	32.468	308	182	7	21	321	25	313	1.41e-43	152
Msa1041650	MtrunA17_Chr4g0074851	32.595	316	173	10	5	311	20	304	1.41e-39	142
Msa1041650	MtrunA17_Chr1g0181431	32.441	299	171	10	18	301	23	305	1.79e-39	141
Msa1041650	MtrunA17_Chr1g0181511	33.108	296	170	9	25	305	27	309	2.82e-39	140
Msa1041650	MtrunA17_Chr5g0432401	41.573	178	98	3	4	175	8	185	1.05e-36	133
Msa1041650	MtrunA17_Chr1g0181481	31.507	292	172	9	25	301	27	305	1.83e-36	133
Msa1041650	MtrunA17_Chr4g0004591	36.408	206	91	2	25	228	77	244	3.60e-36	133
Msa1041650	MtrunA17_Chr2g0292281	36.744	215	98	6	116	321	17	202	1.91e-28	110
Msa1041650	MtrunA17_Chr3g0114491	48.598	107	54	1	25	130	18	124	2.44e-28	106
Msa1041650	MtrunA17_Chr7g0268491	64.130	92	6	2	236	321	13	83	2.18e-27	102
Msa1041650	MtrunA17_Chr2g0316141	30.882	272	149	8	71	321	11	264	1.57e-26	105
Msa1041650	MtrunA17_Chr2g0316181	30.882	272	149	8	71	321	11	264	1.57e-26	105
Msa1041650	MtrunA17_Chr1g0196191	58.537	82	31	1	67	148	27	105	1.76e-24	97.1
Msa1041650	MtrunA17_Chr6g0468731	62.687	67	22	1	64	130	22	85	7.64e-23	90.9
Msa1041650	MtrunA17_Chr3g0114461	32.086	187	105	4	136	321	13	178	2.07e-22	92.8
Msa1041650	MtrunA17_Chr1g0181491	37.391	115	71	1	17	131	4	117	4.58e-21	87.8
Msa1041650	MtrunA17_Chr7g0254181	42.105	114	61	2	77	188	12	122	1.34e-18	81.3
Msa1041650	MtrunA17_Chr5g0432321	34.211	114	67	2	143	256	17	122	1.11e-12	64.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1041650	AT1G05260.1	51.385	325	127	7	8	321	7	311	4.76e-105	310
Msa1041650	AT4G11290.1	50.462	325	131	7	7	321	8	312	1.19e-100	299
Msa1041650	AT3G01190.1	48.773	326	136	7	4	321	5	307	7.95e-94	281
Msa1041650	AT1G05240.1	47.351	302	132	6	28	321	29	311	3.23e-93	280
Msa1041650	AT1G05250.1	47.351	302	132	6	28	321	29	311	3.23e-93	280
Msa1041650	AT3G21770.1	47.634	317	135	7	16	321	18	314	5.72e-93	280
Msa1041650	AT2G39040.1	47.452	314	127	6	23	321	44	334	1.47e-92	279
Msa1041650	AT5G15180.1	48.852	305	127	6	25	321	32	315	7.29e-91	274
Msa1041650	AT5G42180.1	44.444	279	146	3	3	273	1	278	2.89e-80	247
Msa1041650	AT5G51890.1	42.258	310	141	8	23	319	24	308	8.19e-74	230
Msa1041650	AT2G41480.1	38.532	327	173	6	4	321	7	314	3.43e-72	226
Msa1041650	AT5G64120.1	40.803	299	154	7	26	321	36	314	5.69e-71	223
Msa1041650	AT5G06720.1	38.318	321	181	5	5	321	12	319	1.73e-70	222
Msa1041650	AT3G03670.1	38.650	326	176	6	1	321	1	307	3.93e-70	221
Msa1041650	AT5G17820.1	39.130	322	169	7	3	321	2	299	6.60e-70	220
Msa1041650	AT5G66390.1	40.312	320	157	6	14	321	22	319	2.70e-69	219
Msa1041650	AT4G33420.1	39.938	323	153	8	8	319	17	309	3.40e-69	219
Msa1041650	AT5G17820.2	38.415	328	163	7	3	321	55	352	8.64e-69	219
Msa1041650	AT4G33420.2	39.938	323	153	8	8	319	64	356	1.46e-68	218
Msa1041650	AT2G24800.1	46.237	279	132	7	28	294	34	306	5.25e-68	216
Msa1041650	AT5G64100.1	40.333	300	151	7	28	321	40	317	2.46e-67	214
Msa1041650	AT2G18150.1	38.835	309	159	5	23	321	34	322	5.94e-67	213
Msa1041650	AT5G06730.1	38.941	321	179	6	5	321	13	320	6.22e-67	214
Msa1041650	AT5G19890.1	38.854	314	163	6	14	318	19	312	9.28e-67	213
Msa1041650	AT4G31760.1	40.187	321	155	7	11	319	15	310	2.72e-66	211
Msa1041650	AT4G36430.1	37.580	314	178	5	12	321	17	316	4.72e-66	211
Msa1041650	AT2G18140.1	37.380	313	163	6	22	321	29	321	1.07e-64	207
Msa1041650	AT5G39580.1	36.842	323	179	9	3	321	4	305	1.55e-64	206
Msa1041650	AT2G38380.1	38.226	327	170	7	8	321	12	319	1.74e-64	207
Msa1041650	AT5G19880.1	38.264	311	172	7	18	321	18	315	3.21e-64	206
Msa1041650	AT5G14130.1	40.549	328	158	10	3	319	13	314	3.63e-64	206
Msa1041650	AT4G37530.1	40.767	287	150	8	25	298	27	306	1.34e-63	204
Msa1041650	AT5G14130.2	40.549	328	158	10	3	319	54	355	1.47e-63	206
Msa1041650	AT4G37520.1	40.830	289	151	8	23	298	25	306	1.48e-63	204
Msa1041650	AT5G22410.1	36.449	321	177	7	7	321	11	310	1.48e-63	204
Msa1041650	AT3G32980.1	37.771	323	172	7	11	321	15	320	2.44e-63	204
Msa1041650	AT5G67400.1	42.160	287	149	7	4	274	3	288	2.82e-63	204
Msa1041650	AT2G38390.1	37.309	327	173	7	8	321	12	319	3.68e-63	204
Msa1041650	AT4G37530.2	44.141	256	129	6	23	265	25	279	5.86e-63	201
Msa1041650	AT4G37520.2	40.767	287	151	8	23	298	25	303	6.40e-63	202
Msa1041650	AT2G18980.1	42.606	284	145	6	5	276	7	284	9.96e-63	202
Msa1041650	AT1G71695.1	39.542	306	146	9	28	321	47	325	1.12e-62	203
Msa1041650	AT3G49960.1	43.223	273	137	7	23	282	25	292	1.87e-62	201
Msa1041650	AT1G44970.1	40.000	315	160	5	17	321	37	332	2.27e-62	202
Msa1041650	AT4G25980.1	38.413	315	165	8	16	321	18	312	1.34e-61	199
Msa1041650	AT4G26010.1	37.304	319	169	9	7	321	4	295	3.14e-61	197
Msa1041650	AT4G26010.2	37.304	319	169	9	7	321	32	323	8.51e-61	197
Msa1041650	AT3G50990.1	38.141	312	163	5	20	321	36	327	9.20e-61	197
Msa1041650	AT4G08770.1	36.246	309	170	6	23	321	22	313	4.80e-60	196
Msa1041650	AT4G30170.1	41.221	262	138	5	25	274	27	284	2.16e-58	191
Msa1041650	AT5G64110.1	37.500	304	160	6	26	321	35	316	2.32e-58	191
Msa1041650	AT3G49120.1	37.134	307	166	7	21	317	28	317	2.57e-58	191
Msa1041650	AT3G49110.1	37.049	305	165	7	23	317	31	318	2.87e-58	191
Msa1041650	AT1G49570.1	37.821	312	158	7	24	321	47	336	7.08e-58	190
Msa1041650	AT4G33870.1	35.030	334	191	6	14	321	54	387	1.19e-57	191
Msa1041650	AT1G77100.1	37.171	304	158	7	25	319	24	303	1.69e-57	188
Msa1041650	AT2G35380.1	39.103	312	161	6	22	321	27	321	6.80e-57	187
Msa1041650	AT4G08780.1	35.599	309	172	6	23	321	22	313	9.35e-57	187
Msa1041650	AT4G17690.1	37.171	304	161	8	24	319	25	306	3.04e-56	185
Msa1041650	AT2G22420.1	35.294	306	168	6	22	318	20	304	3.19e-56	185
Msa1041650	AT1G14550.1	36.184	304	165	8	25	321	26	307	6.54e-56	184
Msa1041650	AT5G05340.1	36.424	302	166	7	25	321	30	310	1.44e-54	181
Msa1041650	AT3G28200.1	37.171	304	162	7	25	321	21	302	7.47e-54	179
Msa1041650	AT1G34510.1	35.110	319	176	8	7	321	4	295	8.76e-54	178
Msa1041650	AT4G16270.1	36.860	293	167	6	29	317	54	332	1.45e-53	179
Msa1041650	AT2G34060.1	37.294	303	167	8	25	319	42	329	7.69e-53	177
Msa1041650	AT5G47000.1	33.846	325	175	8	11	319	14	314	4.34e-52	175
Msa1041650	AT1G68850.1	34.557	327	182	9	5	317	8	316	4.43e-52	175
Msa1041650	AT5G40150.1	37.705	305	160	8	25	321	32	314	1.17e-51	173
Msa1041650	AT1G30870.1	35.526	304	158	8	28	321	54	329	2.38e-51	173
Msa1041650	AT1G14540.1	33.951	324	188	7	1	321	1	301	6.73e-51	171
Msa1041650	AT2G43480.1	33.754	317	177	9	18	321	25	321	1.35e-48	166
Msa1041650	AT5G24070.1	33.224	304	173	7	28	321	38	321	1.83e-48	166
Msa1041650	AT5G58400.1	33.435	329	175	10	9	321	11	311	2.14e-46	160
Msa1041650	AT5G58390.1	32.515	326	181	8	8	321	4	302	6.07e-46	158
Msa1041650	AT1G24110.1	37.102	283	155	7	5	274	9	281	1.09e-45	158
Msa1041650	AT3G17070.1	33.435	329	187	11	6	321	16	325	5.21e-44	154
Msa1041650	AT5G39580.2	41.579	190	104	4	3	190	4	188	5.31e-44	151
Msa1041650	AT2G24800.2	50.000	162	76	2	28	187	34	192	3.37e-42	146
Msa1041650	AT4G25980.2	46.023	176	89	4	16	189	63	234	3.70e-42	147
Msa1041650	AT4G21960.1	32.075	318	185	7	6	312	7	304	3.30e-41	146
Msa1041650	AT2G37130.1	30.645	310	180	8	23	321	28	313	1.40e-37	137
Msa1041650	AT2G37130.2	30.492	305	177	8	28	321	2	282	1.21e-36	133
Msa1041650	AT2G35380.2	35.081	248	132	6	86	321	3	233	2.78e-32	120
Msa1041650	AT3G17070.2	32.075	265	150	11	67	321	18	262	5.97e-27	107

Find 65 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCAAATGTTGTTGAGCTATT+TGG	0.173041	7_1:+79222620	None:intergenic
CATGACTTGGTTGTATTATC+AGG	0.207951	7_1:-79223017	Msa1041650:intron
ATTCTTCCTTGTAGCTTCTA+TGG	0.251513	7_1:-79223767	Msa1041650:CDS
CAATCTAGAAACATTGTTAA+TGG	0.253287	7_1:-79222524	Msa1041650:CDS
AAGCCTGCTAATGATAAATT+AGG	0.273981	7_1:+79223372	None:intergenic
GATTAGGGCTTCAATGCTTC+TGG	0.289264	7_1:+79223109	None:intergenic
GTCACTTAGGCCTTGGCATT+TGG	0.297824	7_1:+79222667	None:intergenic
AGTTTGGACAAGTGGATGTT+GGG	0.308513	7_1:-79222492	Msa1041650:CDS
TTCAAGAAATTTGCATAAGT+TGG	0.318870	7_1:+79222692	None:intergenic
ATCAACTTGGCTGGCAGCTC+AGG	0.326426	7_1:+79223622	None:intergenic
AGGGACCCTTGTTAATGAAT+TGG	0.329632	7_1:-79221262	Msa1041650:CDS
AATCTAGAAACATTGTTAAT+GGG	0.340860	7_1:-79222523	Msa1041650:CDS
AGAAGACATAAAAGAAGCTT+TGG	0.382183	7_1:-79223340	Msa1041650:CDS
TCAGCACATGATACAATTCC+TGG	0.383508	7_1:+79223306	None:intergenic
AAGGTGCTGGAATATTGATT+AGG	0.388624	7_1:+79223093	None:intergenic
AACAATGTTTCTAGATTGCT+TGG	0.397011	7_1:+79222529	None:intergenic
AGGTGCTGGAATATTGATTA+GGG	0.399370	7_1:+79223094	None:intergenic
CCCTACAACATGTCTCTTCA+AGG	0.409923	7_1:-79223645	Msa1041650:CDS
GTCTGAGCTGAGTGATGTTA+TGG	0.410714	7_1:+79223069	None:intergenic
AGCAACGTGGGAAGTGCTTA+CGG	0.416975	7_1:-79223153	Msa1041650:CDS
TTTATAGGAGCACACACAAT+TGG	0.421672	7_1:-79222791	Msa1041650:intron
ATTGCAACTTATTCAGCAAC+AGG	0.429672	7_1:-79222760	Msa1041650:CDS
ATTCCTAATTTATCATTAGC+AGG	0.434054	7_1:-79223375	Msa1041650:CDS
TTAGTGAAGGAGGCAGCCTC+AGG	0.457227	7_1:-79223723	Msa1041650:CDS
TGGTGGTGTCACTTAGGCCT+TGG	0.470093	7_1:+79222660	None:intergenic
GCAACGTGGGAAGTGCTTAC+GGG	0.476545	7_1:-79223152	Msa1041650:CDS
GTGGATGTTGGGGTTCAACT+TGG	0.477888	7_1:-79222481	Msa1041650:CDS
AGACATAAAAGAAGCTTTGG+AGG	0.490687	7_1:-79223337	Msa1041650:CDS
TAGTTTGGACAAGTGGATGT+TGG	0.491028	7_1:-79222493	Msa1041650:CDS
TGCTGGTAACACTGCGGAGA+AGG	0.493705	7_1:-79223403	Msa1041650:CDS
AAAGCTTACTCTTCATGACT+TGG	0.493798	7_1:-79223030	Msa1041650:CDS
CTGTTGTGGTGGTGTCACTT+AGG	0.496811	7_1:+79222654	None:intergenic
GAAGAGGATGGGAGCTATTG+AGG	0.498561	7_1:-79221199	Msa1041650:CDS
TGCAGTCTTATCAACTTGGC+TGG	0.499023	7_1:+79223613	None:intergenic
GTTTCAGGGGTGTGACGCAT+CGG	0.508181	7_1:-79223442	Msa1041650:intron
TTCTCAGTCAATGAAGAGGA+TGG	0.515611	7_1:-79221211	Msa1041650:CDS
GCATAAGTTGGATTCAGAGA+TGG	0.521194	7_1:+79222704	None:intergenic
TGTTTCATTGGGATTAGTGA+AGG	0.528117	7_1:-79223736	Msa1041650:CDS
GCTTTGGAGGAGAAATGTCC+AGG	0.528854	7_1:-79223324	Msa1041650:CDS
TGGATCCATCTCTACTGTTG+TGG	0.535692	7_1:+79222640	None:intergenic
CACCACCACAACAGTAGAGA+TGG	0.539448	7_1:-79222645	Msa1041650:CDS
CTCCGCAGTGTTACCAGCAG+TGG	0.544816	7_1:+79223407	None:intergenic
TTAACAATCTCCTCAGCTTG+AGG	0.546103	7_1:+79223676	None:intergenic
AAAATGCAGTCTTATCAACT+TGG	0.547582	7_1:+79223609	None:intergenic
CCTTGAAGAGACATGTTGTA+GGG	0.548319	7_1:+79223645	None:intergenic
GCCTTGAAGAGACATGTTGT+AGG	0.550855	7_1:+79223644	None:intergenic
GGAGCTATTGAGGTCCTCAC+TGG	0.551814	7_1:-79221189	None:intergenic
GTGAAACCAATTCATTAACA+AGG	0.557848	7_1:+79221256	None:intergenic
ATCCATCTCTACTGTTGTGG+TGG	0.572153	7_1:+79222643	None:intergenic
TGAAACCAATTCATTAACAA+GGG	0.575268	7_1:+79221257	None:intergenic
TCTCAGTCAATGAAGAGGAT+GGG	0.577113	7_1:-79221210	Msa1041650:CDS
TGCTAATGATAAATTAGGAA+TGG	0.579765	7_1:+79223377	None:intergenic
GTTTGGACAAGTGGATGTTG+GGG	0.585085	7_1:-79222491	Msa1041650:CDS
GTGATGTTATGGAAAGGTGC+TGG	0.588441	7_1:+79223080	None:intergenic
GTGCTTACGGGTAGAAGAGA+TGG	0.590073	7_1:-79223140	Msa1041650:CDS
TTCTTGAAGACCAAATGCCA+AGG	0.601738	7_1:-79222677	Msa1041650:CDS
AAAGCACCATAGAAGCTACA+AGG	0.611637	7_1:+79223761	None:intergenic
TTCATTGGGATTAGTGAAGG+AGG	0.626140	7_1:-79223733	Msa1041650:CDS
GTTTAATGATAAAGCAACGT+GGG	0.643577	7_1:-79223165	Msa1041650:CDS
GGAGCACACACAATTGGAGT+AGG	0.649757	7_1:-79222785	Msa1041650:CDS
GAAGTCATGTCCTCAAGCTG+AGG	0.657533	7_1:-79223686	Msa1041650:CDS
ATGTGCTGATATACTCACAT+TGG	0.669867	7_1:-79223292	Msa1041650:CDS
AGCTGAGTGATGTTATGGAA+AGG	0.700700	7_1:+79223074	None:intergenic
AGTTTAATGATAAAGCAACG+TGG	0.776571	7_1:-79223166	Msa1041650:CDS
GTCCACTGCTGGTAACACTG+CGG	0.786302	7_1:-79223409	Msa1041650:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAGGAATATGTATAAATTAA+TGG	+	chr7_1:79221742-79221761	None:intergenic	15.0%
!!	AAAATATGAATGAATAAATC+AGG	+	chr7_1:79221777-79221796	None:intergenic	15.0%
!!	AATTAAATGTAAGAAATCTA+TGG	+	chr7_1:79222980-79222999	None:intergenic	15.0%
!!	ACTAAAAAAATTTGAATCTA+TGG	-	chr7_1:79223064-79223083	Msa1041650:CDS	15.0%
!!	TGTAAATTAAATGAAGAAAA+TGG	-	chr7_1:79223565-79223584	Msa1041650:intron	15.0%
!!	ACTTAAATTATTACATCTGT+TGG	+	chr7_1:79222092-79222111	None:intergenic	20.0%
!!	AGATGTAATAATTTAAGTCA+CGG	-	chr7_1:79222094-79222113	Msa1041650:intron	20.0%
!!	TACTAGTTAAATTAACATGT+TGG	-	chr7_1:79222146-79222165	Msa1041650:intron	20.0%
!!	TGTTGGATATATGTATTTAT+AGG	-	chr7_1:79222163-79222182	Msa1041650:intron	20.0%
!!	AATCTAGAAACATTGTTAAT+GGG	-	chr7_1:79222446-79222465	Msa1041650:intron	20.0%
!!!	TTAATGGGTTAATTTTAGTT+TGG	-	chr7_1:79222461-79222480	Msa1041650:intron	20.0%
!!!	CATGGTTTTGAATTTTTTTA+TGG	+	chr7_1:79222911-79222930	None:intergenic	20.0%
!!	CATAAAAAAATTCAAAACCA+TGG	-	chr7_1:79222909-79222928	Msa1041650:intron	20.0%
!	TCTTATAAAAATTCTTCCTG+AGG	+	chr7_1:79221265-79221284	None:intergenic	25.0%
!!!	ATTTTCATGACTGTTTTGTT+AGG	-	chr7_1:79221378-79221397	Msa1041650:intron	25.0%
!!!	TTTTCATGACTGTTTTGTTA+GGG	-	chr7_1:79221379-79221398	Msa1041650:intron	25.0%
!	CTAAAATTGTAAAGATCAAG+GGG	+	chr7_1:79221411-79221430	None:intergenic	25.0%
!	GCTAAAATTGTAAAGATCAA+GGG	+	chr7_1:79221412-79221431	None:intergenic	25.0%
!	AGCTAAAATTGTAAAGATCA+AGG	+	chr7_1:79221413-79221432	None:intergenic	25.0%
!	TGCTAATGATAAATTAGGAA+TGG	+	chr7_1:79221595-79221614	None:intergenic	25.0%
!	ATTCCTAATTTATCATTAGC+AGG	-	chr7_1:79221594-79221613	Msa1041650:intron	25.0%
!	CATGTTAATTTAACTAGTAC+TGG	+	chr7_1:79222145-79222164	None:intergenic	25.0%
!	TTCAAGAAATTTGCATAAGT+TGG	+	chr7_1:79222280-79222299	None:intergenic	25.0%
!	CAATCTAGAAACATTGTTAA+TGG	-	chr7_1:79222445-79222464	Msa1041650:intron	25.0%
!!!	TTAATTTTAGTTTGGACAAG+TGG	-	chr7_1:79222469-79222488	Msa1041650:intron	25.0%
!!!	AGTTTGATGTGAAGATTTTT+TGG	-	chr7_1:79223210-79223229	Msa1041650:intron	25.0%
!!!	GTTTGATGTGAAGATTTTTT+GGG	-	chr7_1:79223211-79223230	Msa1041650:intron	25.0%
!	AAGCACATAAACAACATATA+AGG	+	chr7_1:79223243-79223262	None:intergenic	25.0%
!	TGAAACCAATTCATTAACAA+GGG	+	chr7_1:79223715-79223734	None:intergenic	25.0%
!	AAAATGCAGTCTTATCAACT+TGG	+	chr7_1:79221363-79221382	None:intergenic	30.0%
	TAGAAATTGTACTAAGTGAC+AGG	-	chr7_1:79221491-79221510	Msa1041650:intron	30.0%
	AAGCCTGCTAATGATAAATT+AGG	+	chr7_1:79221600-79221619	None:intergenic	30.0%
	AGAAGACATAAAAGAAGCTT+TGG	-	chr7_1:79221629-79221648	Msa1041650:intron	30.0%
	AGTTTAATGATAAAGCAACG+TGG	-	chr7_1:79221803-79221822	Msa1041650:intron	30.0%
	GTTTAATGATAAAGCAACGT+GGG	-	chr7_1:79221804-79221823	Msa1041650:intron	30.0%
	TCAAATGTTGTTGAGCTATT+TGG	+	chr7_1:79222352-79222371	None:intergenic	30.0%
!!	AACAATGTTTCTAGATTGCT+TGG	+	chr7_1:79222443-79222462	None:intergenic	30.0%
	AGCTTGTATTGTATCTAACT+TGG	+	chr7_1:79222589-79222608	None:intergenic	30.0%
	ATGATGATATAAAGTGATGG+TGG	+	chr7_1:79222750-79222769	None:intergenic	30.0%
!	GTGATGATGATATAAAGTGA+TGG	+	chr7_1:79222753-79222772	None:intergenic	30.0%
	TTCACTAAAAAACAGAGTTG+TGG	+	chr7_1:79222817-79222836	None:intergenic	30.0%
	AAATTCAAAACCATGGATTC+AGG	-	chr7_1:79222916-79222935	Msa1041650:intron	30.0%
!!!	TGTTGTTCCTGAGTTTTTTT+GGG	-	chr7_1:79223277-79223296	Msa1041650:intron	30.0%
	ATAAAGTCCCAAAAAAACTC+AGG	+	chr7_1:79223287-79223306	None:intergenic	30.0%
!!!	TGAGTTTTTTTGGGACTTTA+TGG	-	chr7_1:79223286-79223305	Msa1041650:CDS	30.0%
!!!	GAGTTTTTTTGGGACTTTAT+GGG	-	chr7_1:79223287-79223306	Msa1041650:CDS	30.0%
!	AATCCAATAACTACCTTTTG+AGG	-	chr7_1:79223392-79223411	Msa1041650:CDS	30.0%
!	TGGTGTTCTAATTTTAGACT+TGG	-	chr7_1:79223416-79223435	Msa1041650:CDS	30.0%
!	GGTGTTCTAATTTTAGACTT+GGG	-	chr7_1:79223417-79223436	Msa1041650:CDS	30.0%
!	ATGGATTGTGATGAATCTAT+TGG	-	chr7_1:79223462-79223481	Msa1041650:intron	30.0%
	TTGAAATTACCTGGTATCAT+AGG	+	chr7_1:79223647-79223666	None:intergenic	30.0%
	ATGATACCAGGTAATTTCAA+TGG	-	chr7_1:79223647-79223666	Msa1041650:CDS	30.0%
!!!	GTATATGTTTTGGTCTAACT+TGG	+	chr7_1:79223674-79223693	None:intergenic	30.0%
	AGTTAGACCAAAACATATAC+TGG	-	chr7_1:79223674-79223693	Msa1041650:CDS	30.0%
	ATATACTGGTCCAAACTAAA+GGG	-	chr7_1:79223688-79223707	Msa1041650:CDS	30.0%
	GTGAAACCAATTCATTAACA+AGG	+	chr7_1:79223716-79223735	None:intergenic	30.0%
	ATTCTTCCTTGTAGCTTCTA+TGG	-	chr7_1:79221202-79221221	Msa1041650:CDS	35.0%
!	ATGGTGCTTTTCTGTTTCAT+TGG	-	chr7_1:79221221-79221240	Msa1041650:CDS	35.0%
!	TGGTGCTTTTCTGTTTCATT+GGG	-	chr7_1:79221222-79221241	Msa1041650:CDS	35.0%
!	TGTTTCATTGGGATTAGTGA+AGG	-	chr7_1:79221233-79221252	Msa1041650:CDS	35.0%
	TACTAAGTGACAGGCATATA+TGG	-	chr7_1:79221500-79221519	Msa1041650:intron	35.0%
!	AGACATAAAAGAAGCTTTGG+AGG	-	chr7_1:79221632-79221651	Msa1041650:intron	35.0%
!	ATGTGCTGATATACTCACAT+TGG	-	chr7_1:79221677-79221696	Msa1041650:intron	35.0%
!!	AGGTGCTGGAATATTGATTA+GGG	+	chr7_1:79221878-79221897	None:intergenic	35.0%
!!	AAGGTGCTGGAATATTGATT+AGG	+	chr7_1:79221879-79221898	None:intergenic	35.0%
	AAAGCTTACTCTTCATGACT+TGG	-	chr7_1:79221939-79221958	Msa1041650:intron	35.0%
!!	CATGACTTGGTTGTATTATC+AGG	-	chr7_1:79221952-79221971	Msa1041650:intron	35.0%
	TCTGTGTCTTGAAATGTGAT+TGG	+	chr7_1:79222049-79222068	None:intergenic	35.0%
	ACATTTCAAGACACAGACAT+CGG	-	chr7_1:79222052-79222071	Msa1041650:intron	35.0%
!	TTTATAGGAGCACACACAAT+TGG	-	chr7_1:79222178-79222197	Msa1041650:intron	35.0%
	ATTGCAACTTATTCAGCAAC+AGG	-	chr7_1:79222209-79222228	Msa1041650:intron	35.0%
!	CTTTTCAACTTCACTGGAAA+AGG	-	chr7_1:79222232-79222251	Msa1041650:intron	35.0%
	TCCTGTACTTCTACAAAACA+AGG	-	chr7_1:79222384-79222403	Msa1041650:intron	35.0%
	CCTGTACTTCTACAAAACAA+GGG	-	chr7_1:79222385-79222404	Msa1041650:intron	35.0%
	TTGTATCTAACTTGGACATC+AGG	+	chr7_1:79222581-79222600	None:intergenic	35.0%
	ATGACAATAGTACTACTGTG+CGG	+	chr7_1:79222626-79222645	None:intergenic	35.0%
	ATGAATGTGTATGTGGTTGT+TGG	+	chr7_1:79222725-79222744	None:intergenic	35.0%
	AGGACAAGCAATTACAGATT+TGG	-	chr7_1:79222936-79222955	Msa1041650:intron	35.0%
	GGACAAGCAATTACAGATTT+GGG	-	chr7_1:79222937-79222956	Msa1041650:intron	35.0%
!!!	GTGTTGTTCCTGAGTTTTTT+TGG	-	chr7_1:79223276-79223295	Msa1041650:intron	35.0%
	CATCCTCAAAAGGTAGTTAT+TGG	+	chr7_1:79223398-79223417	None:intergenic	35.0%
!!	CAATAACTACCTTTTGAGGA+TGG	-	chr7_1:79223396-79223415	Msa1041650:CDS	35.0%
	ATTAGAACACCATCCTCAAA+AGG	+	chr7_1:79223408-79223427	None:intergenic	35.0%
!!!	TAGACTTGGGTTGAGTTTTA+AGG	-	chr7_1:79223430-79223449	Msa1041650:CDS	35.0%
!!!	AGACTTGGGTTGAGTTTTAA+GGG	-	chr7_1:79223431-79223450	Msa1041650:CDS	35.0%
	ATTGTGATGAATCTATTGGC+AGG	-	chr7_1:79223466-79223485	Msa1041650:intron	35.0%
	TTGTGATGAATCTATTGGCA+GGG	-	chr7_1:79223467-79223486	Msa1041650:intron	35.0%
!!	TAGTGTGTTGTTGGCTTATA+GGG	-	chr7_1:79223593-79223612	Msa1041650:CDS	35.0%
!	GTTTGGACCAGTATATGTTT+TGG	+	chr7_1:79223684-79223703	None:intergenic	35.0%
	CATATACTGGTCCAAACTAA+AGG	-	chr7_1:79223687-79223706	Msa1041650:CDS	35.0%
!	AGTTTTCTCAGTCAATGAAG+AGG	-	chr7_1:79223754-79223773	Msa1041650:CDS	35.0%
!	AAAGCACCATAGAAGCTACA+AGG	+	chr7_1:79221211-79221230	None:intergenic	40.0%
!	TTCATTGGGATTAGTGAAGG+AGG	-	chr7_1:79221236-79221255	Msa1041650:CDS	40.0%
	TTAACAATCTCCTCAGCTTG+AGG	+	chr7_1:79221296-79221315	None:intergenic	40.0%
	CCTTGAAGAGACATGTTGTA+GGG	+	chr7_1:79221327-79221346	None:intergenic	40.0%
	GCATATATGGTTGCGTTTCA+GGG	-	chr7_1:79221513-79221532	Msa1041650:intron	40.0%
	CATATATGGTTGCGTTTCAG+GGG	-	chr7_1:79221514-79221533	Msa1041650:intron	40.0%
	TCAGCACATGATACAATTCC+TGG	+	chr7_1:79221666-79221685	None:intergenic	40.0%
	AATCAGGATGCTTCATGCAT+AGG	+	chr7_1:79221761-79221780	None:intergenic	40.0%
	AGCTGAGTGATGTTATGGAA+AGG	+	chr7_1:79221898-79221917	None:intergenic	40.0%
!	AACAGGCTTTTCAACTTCAC+TGG	-	chr7_1:79222226-79222245	Msa1041650:intron	40.0%
!	GCATAAGTTGGATTCAGAGA+TGG	+	chr7_1:79222268-79222287	None:intergenic	40.0%
	TTCTTGAAGACCAAATGCCA+AGG	-	chr7_1:79222292-79222311	Msa1041650:intron	40.0%
!!!	CCCTTGTTTTGTAGAAGTAC+AGG	+	chr7_1:79222388-79222407	None:intergenic	40.0%
	TAGTTTGGACAAGTGGATGT+TGG	-	chr7_1:79222476-79222495	Msa1041650:intron	40.0%
	AGTTTGGACAAGTGGATGTT+GGG	-	chr7_1:79222477-79222496	Msa1041650:CDS	40.0%
	AACTTGGACCAGTTGAATTC+TGG	-	chr7_1:79222504-79222523	Msa1041650:CDS	40.0%
	ATCAAAGGCCAGAATTCAAC+TGG	+	chr7_1:79222515-79222534	None:intergenic	40.0%
	AATTGCTTGTCCTGAATCCA+TGG	+	chr7_1:79222929-79222948	None:intergenic	40.0%
	ATGGCTTCCAAGTATAGCTT+TGG	-	chr7_1:79223083-79223102	Msa1041650:CDS	40.0%
	TATGTGCTTGAATCCAACCA+TGG	-	chr7_1:79223254-79223273	Msa1041650:intron	40.0%
	AAAACTCAGGAACAACACCA+TGG	+	chr7_1:79223274-79223293	None:intergenic	40.0%
!!	ATGGTTTGCTAGTGTGTTGT+TGG	-	chr7_1:79223584-79223603	Msa1041650:intron	40.0%
!!	CTAGTGTGTTGTTGGCTTAT+AGG	-	chr7_1:79223592-79223611	Msa1041650:CDS	40.0%
!!	TTGTTGGCTTATAGGGTGTA+TGG	-	chr7_1:79223600-79223619	Msa1041650:CDS	40.0%
	GCTTATAGGGTGTATGGTAT+GGG	-	chr7_1:79223606-79223625	Msa1041650:CDS	40.0%
	GAAACACAACCTATGATACC+AGG	-	chr7_1:79223635-79223654	Msa1041650:CDS	40.0%
	CTTGGACCATTGAAATTACC+TGG	+	chr7_1:79223656-79223675	None:intergenic	40.0%
	TAACAAGGGTCCCTTTAGTT+TGG	+	chr7_1:79223701-79223720	None:intergenic	40.0%
	AGGGACCCTTGTTAATGAAT+TGG	-	chr7_1:79223707-79223726	Msa1041650:CDS	40.0%
	TTCTCAGTCAATGAAGAGGA+TGG	-	chr7_1:79223758-79223777	Msa1041650:CDS	40.0%
	TCTCAGTCAATGAAGAGGAT+GGG	-	chr7_1:79223759-79223778	Msa1041650:CDS	40.0%
	CCCTACAACATGTCTCTTCA+AGG	-	chr7_1:79221324-79221343	Msa1041650:intron	45.0%
	GCCTTGAAGAGACATGTTGT+AGG	+	chr7_1:79221328-79221347	None:intergenic	45.0%
!	TGCAGTCTTATCAACTTGGC+TGG	+	chr7_1:79221359-79221378	None:intergenic	45.0%
	GGCATATATGGTTGCGTTTC+AGG	-	chr7_1:79221512-79221531	Msa1041650:intron	45.0%
	GATTAGGGCTTCAATGCTTC+TGG	+	chr7_1:79221863-79221882	None:intergenic	45.0%
!	GTGATGTTATGGAAAGGTGC+TGG	+	chr7_1:79221892-79221911	None:intergenic	45.0%
	GTCTGAGCTGAGTGATGTTA+TGG	+	chr7_1:79221903-79221922	None:intergenic	45.0%
	ATCCATCTCTACTGTTGTGG+TGG	+	chr7_1:79222329-79222348	None:intergenic	45.0%
	TGGATCCATCTCTACTGTTG+TGG	+	chr7_1:79222332-79222351	None:intergenic	45.0%
	GTTTGGACAAGTGGATGTTG+GGG	-	chr7_1:79222478-79222497	Msa1041650:CDS	45.0%
	CTAACTTGGACATCAGGTAG+TGG	+	chr7_1:79222575-79222594	None:intergenic	45.0%
	CAATAGTACTACTGTGCGGA+CGG	+	chr7_1:79222622-79222641	None:intergenic	45.0%
!	GGTGGTGATGAATGTGTATG+TGG	+	chr7_1:79222732-79222751	None:intergenic	45.0%
!!	AGCGCTTGCTATGAAGAGAA+TGG	+	chr7_1:79222862-79222881	None:intergenic	45.0%
	CTCTTCATAGCAAGCGCTAT+TGG	-	chr7_1:79222864-79222883	Msa1041650:intron	45.0%
!	CATAGCAAGCGCTATTGGTT+TGG	-	chr7_1:79222869-79222888	Msa1041650:intron	45.0%
!!	GCGCTATTGGTTTGGAATCA+TGG	-	chr7_1:79222877-79222896	Msa1041650:intron	45.0%
	GTAGTGGCCAAAGCTATACT+TGG	+	chr7_1:79223093-79223112	None:intergenic	45.0%
	GAGAGAAGAGGAAAAGGTAG+TGG	+	chr7_1:79223109-79223128	None:intergenic	45.0%
	GACGATGAGAGAAGAGGAAA+AGG	+	chr7_1:79223115-79223134	None:intergenic	45.0%
	TTGAACGACGATGAGAGAAG+AGG	+	chr7_1:79223121-79223140	None:intergenic	45.0%
!	CAAGCGAGGGAAAGTTGATT+TGG	+	chr7_1:79223156-79223175	None:intergenic	45.0%
	GTAGCAAACATCACAAGCGA+GGG	+	chr7_1:79223169-79223188	None:intergenic	45.0%
	TGTAGCAAACATCACAAGCG+AGG	+	chr7_1:79223170-79223189	None:intergenic	45.0%
	GGGACTTTATGGGTAAGTTC+TGG	-	chr7_1:79223297-79223316	Msa1041650:CDS	45.0%
!!!	GGGTTGAGTTTTAAGGGTGT+TGG	-	chr7_1:79223437-79223456	Msa1041650:CDS	45.0%
!!!	AGTTTTAAGGGTGTTGGCGA+TGG	-	chr7_1:79223443-79223462	Msa1041650:intron	45.0%
	GAATCTATTGGCAGGGTTGA+TGG	-	chr7_1:79223474-79223493	Msa1041650:intron	45.0%
	GGCTTATAGGGTGTATGGTA+TGG	-	chr7_1:79223605-79223624	Msa1041650:CDS	45.0%
!!	ATTAATTAATATTATATCAA+AGG	+	chr7_1:79222530-79222549	None:intergenic	5.0%
	GAAGTCATGTCCTCAAGCTG+AGG	-	chr7_1:79221283-79221302	Msa1041650:intron	50.0%
!!!	GTGTGACGCATCGGTTTTGT+TGG	-	chr7_1:79221536-79221555	Msa1041650:intron	50.0%
!!	GTTTTGTTGGAGTCCACTGC+TGG	-	chr7_1:79221549-79221568	Msa1041650:intron	50.0%
!!	GCTTTGGAGGAGAAATGTCC+AGG	-	chr7_1:79221645-79221664	Msa1041650:intron	50.0%
!!	AGCAACGTGGGAAGTGCTTA+CGG	-	chr7_1:79221816-79221835	Msa1041650:intron	50.0%
	GTGCTTACGGGTAGAAGAGA+TGG	-	chr7_1:79221829-79221848	Msa1041650:intron	50.0%
	GGAGCACACACAATTGGAGT+AGG	-	chr7_1:79222184-79222203	Msa1041650:intron	50.0%
	GTCACTTAGGCCTTGGCATT+TGG	+	chr7_1:79222305-79222324	None:intergenic	50.0%
!!	CTGTTGTGGTGGTGTCACTT+AGG	+	chr7_1:79222318-79222337	None:intergenic	50.0%
	CACCACCACAACAGTAGAGA+TGG	-	chr7_1:79222324-79222343	Msa1041650:intron	50.0%
	GTGGATGTTGGGGTTCAACT+TGG	-	chr7_1:79222488-79222507	Msa1041650:CDS	50.0%
	CTCAGGAACAACACCATGGT+TGG	+	chr7_1:79223270-79223289	None:intergenic	50.0%
!!	AGGGTTGATGGTGAAGATGG+AGG	-	chr7_1:79223486-79223505	Msa1041650:intron	50.0%
	GAAGAGGATGGGAGCTATTG+AGG	-	chr7_1:79223770-79223789	Msa1041650:CDS	50.0%
	TTAGTGAAGGAGGCAGCCTC+AGG	-	chr7_1:79221246-79221265	Msa1041650:CDS	55.0%
	ATCAACTTGGCTGGCAGCTC+AGG	+	chr7_1:79221350-79221369	None:intergenic	55.0%
!	GTTTCAGGGGTGTGACGCAT+CGG	-	chr7_1:79221527-79221546	Msa1041650:intron	55.0%
	GTCCACTGCTGGTAACACTG+CGG	-	chr7_1:79221560-79221579	Msa1041650:intron	55.0%
	TGCTGGTAACACTGCGGAGA+AGG	-	chr7_1:79221566-79221585	Msa1041650:intron	55.0%
!!	GCAACGTGGGAAGTGCTTAC+GGG	-	chr7_1:79221817-79221836	Msa1041650:intron	55.0%
!!	TGGTGGTGTCACTTAGGCCT+TGG	+	chr7_1:79222312-79222331	None:intergenic	55.0%
!!	GGCAGGGTTGATGGTGAAGA+TGG	-	chr7_1:79223483-79223502	Msa1041650:intron	55.0%
	CTCCGCAGTGTTACCAGCAG+TGG	+	chr7_1:79221565-79221584	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_1	gene	79221191	79223800	79221191	ID=Msa1041650;Name=Msa1041650
chr7_1	mRNA	79221191	79223800	79221191	ID=Msa1041650-mRNA-1;Parent=Msa1041650;Name=Msa1041650-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0\|0\|0\|1\|0.6\|0.5\|6\|0\|321
chr7_1	exon	79223591	79223800	79223591	ID=Msa1041650-mRNA-1:exon:21362;Parent=Msa1041650-mRNA-1
chr7_1	exon	79223278	79223457	79223278	ID=Msa1041650-mRNA-1:exon:21361;Parent=Msa1041650-mRNA-1
chr7_1	exon	79223018	79223186	79223018	ID=Msa1041650-mRNA-1:exon:21360;Parent=Msa1041650-mRNA-1
chr7_1	exon	79222604	79222806	79222604	ID=Msa1041650-mRNA-1:exon:21359;Parent=Msa1041650-mRNA-1
chr7_1	exon	79222477	79222585	79222477	ID=Msa1041650-mRNA-1:exon:21358;Parent=Msa1041650-mRNA-1
chr7_1	exon	79221191	79221282	79221191	ID=Msa1041650-mRNA-1:exon:21357;Parent=Msa1041650-mRNA-1
chr7_1	CDS	79223591	79223800	79223591	ID=Msa1041650-mRNA-1:cds;Parent=Msa1041650-mRNA-1
chr7_1	CDS	79223278	79223457	79223278	ID=Msa1041650-mRNA-1:cds;Parent=Msa1041650-mRNA-1
chr7_1	CDS	79223018	79223186	79223018	ID=Msa1041650-mRNA-1:cds;Parent=Msa1041650-mRNA-1
chr7_1	CDS	79222604	79222806	79222604	ID=Msa1041650-mRNA-1:cds;Parent=Msa1041650-mRNA-1
chr7_1	CDS	79222477	79222585	79222477	ID=Msa1041650-mRNA-1:cds;Parent=Msa1041650-mRNA-1
chr7_1	CDS	79221191	79221282	79221191	ID=Msa1041650-mRNA-1:cds;Parent=Msa1041650-mRNA-1

Gene Sequence

>Msa1041650

ATGAAGATGAAATTCTTCCTTGTAGCTTCTATGGTGCTTTTCTGTTTCATTGGGATTAGTGAAGGAGGCAGCCTCAGGAAGAATTTTTATAAGAAGTCATGTCCTCAAGCTGAGGAGATTGTTAAGAACGTAACCCTACAACATGTCTCTTCAAGGCCTGAGCTGCCAGCCAAGTTGATAAGACTGCATTTTCATGACTGTTTTGTTAGGGGGTGTGACGCATCGGTTTTGTTGGAGTCCACTGCTGGTAACACTGCGGAGAAGGATGCCATTCCTAATTTATCATTAGCAGGCTTTGATCTGATAGAAGACATAAAAGAAGCTTTGGAGGAGAAATGTCCAGGAATTGTATCATGTGCTGATATACTCACATTGGCTACTAGAGATGCTTTTAATGATAAAGCAACGTGGGAAGTGCTTACGGGTAGAAGAGATGGTACTGTGTCCAGAAGCATTGAAGCCCTAATCAATATTCCAGCACCTTTCCATAACATCACTCAGCTCAGACAAATCTTTGCTAGTAAAAAGCTTACTCTTCATGACTTGGTTGTATTATCAGGAGCACACACAATTGGAGTAGGACATTGCAACTTATTCAGCAACAGGCTTTTCAACTTCACTGGAAAAGGTGATCAAGATCCATCTCTGAATCCAACTTATGCAAATTTCTTGAAGACCAAATGCCAAGGCCTAAGTGACACCACCACAACAGTAGAGATGGATCCAAATAGCTCAACAACATTTGACAATGACTATTATCCTGGTCTCTTCACATCAGATGCTGCTCTTCTAACAACCAAGCAATCTAGAAACATTGTTAATGGGTTAATTTTAGTTTGGACAAGTGGATGTTGGGGTTCAACTTGGACCAGGACCCTTGTTAATGAATTGGTTTCACAAAATAAATTCTTCACTGAGTTTTCTCAGTCAATGAAGAGGATGGGAGCTATTGAGGTCCTCACT

Protein sequence

>Msa1041650

MKMKFFLVASMVLFCFIGISEGGSLRKNFYKKSCPQAEEIVKNVTLQHVSSRPELPAKLIRLHFHDCFVRGCDASVLLESTAGNTAEKDAIPNLSLAGFDLIEDIKEALEEKCPGIVSCADILTLATRDAFNDKATWEVLTGRRDGTVSRSIEALINIPAPFHNITQLRQIFASKKLTLHDLVVLSGAHTIGVGHCNLFSNRLFNFTGKGDQDPSLNPTYANFLKTKCQGLSDTTTTVEMDPNSSTTFDNDYYPGLFTSDAALLTTKQSRNIVNGLILVWTSGCWGSTWTRTLVNELVSQNKFFTEFSQSMKRMGAIEVLT