AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0861400


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0861400 MtrunA17_Chr5g0441201 99.198 374 3 0 32 405 118 491 0.0 734
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0861400 AT5G19500.1 76.579 380 81 3 32 404 122 500 0.0 551
Msa0861400 AT2G33260.1 25.862 406 246 11 32 388 28 427 1.30e-24 105
Msa0861400 AT2G33260.2 25.862 406 246 11 32 388 132 531 1.56e-24 105

Find 100 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTTTATTGGTGCAATTAA+TGG 0.137815 5_4:-60708950 Msa0861400:CDS
ACCACTTATACTCTCATTAT+TGG 0.145271 5_4:-60706746 Msa0861400:CDS
TAAATTTCATCCAATATTTA+AGG 0.148372 5_4:+60706043 None:intergenic
AAACAGTGTAAAGTTATTTA+AGG 0.149158 5_4:-60706141 Msa0861400:three_prime_UTR
ATCTTACATTGGATTTGTTT+TGG 0.161342 5_4:-60707652 Msa0861400:CDS
CTTCCTCCTGGAACTATTTC+AGG 0.169530 5_4:+60706330 None:intergenic
AAACTTTGTTCCTTAAATAT+TGG 0.215235 5_4:-60706053 Msa0861400:three_prime_UTR
CACTTATTCTGTTCCTAGTA+TGG 0.223492 5_4:-60707900 Msa0861400:CDS
CTAATGGTTCTTGGTTGTTC+AGG 0.261901 5_4:-60706297 Msa0861400:CDS
GCTTTATTGGTGCAATTAAT+GGG 0.276183 5_4:-60708949 Msa0861400:CDS
TACTGTCCCTAAAGTTCTTC+TGG 0.295009 5_4:+60709663 None:intergenic
CATTCTTTGTTGGGCATTCA+TGG 0.297126 5_4:-60710287 Msa0861400:intron
TCAATGGCCAGAAGAACTTT+AGG 0.325642 5_4:-60709670 Msa0861400:CDS
TTTAAAGCCTTGGACTTTGC+TGG 0.326378 5_4:-60706709 Msa0861400:CDS
ATTTGTAGCCAGCGCTTTAT+TGG 0.335131 5_4:-60708962 Msa0861400:intron
TTGGACTTTGCTGGAACATA+TGG 0.347713 5_4:-60706700 Msa0861400:CDS
ATAACCCTACTAATGGTTCT+TGG 0.355239 5_4:-60706306 Msa0861400:CDS
AACAGTGTAAAGTTATTTAA+GGG 0.356671 5_4:-60706140 Msa0861400:three_prime_UTR
CGCACTCTCATTTGTTTACC+AGG 0.361529 5_4:-60708197 Msa0861400:intron
TGTATGGAAGAGGCCTGTTT+TGG 0.367187 5_4:+60706785 None:intergenic
AGATCTTCAAATGGAACAAT+TGG 0.371731 5_4:-60707814 Msa0861400:CDS
ACAAACAGAAACAAACAAAA+AGG 0.374448 5_4:+60706191 None:intergenic
AAACTACCTGAAATAGTTCC+AGG 0.375276 5_4:-60706336 Msa0861400:CDS
CAGTTACTTGCATTCTTTGT+TGG 0.386325 5_4:-60710297 Msa0861400:CDS
CAGTAGGAGTTCAAATTTCA+TGG 0.400109 5_4:-60709645 Msa0861400:intron
ATTAATGGGGTTCTAGTAGT+TGG 0.405738 5_4:-60708935 Msa0861400:CDS
GAAGATCTCAACTGTTGTAA+TGG 0.406888 5_4:+60707829 None:intergenic
AAGGAGACTTGTTAAAAGTA+AGG 0.407800 5_4:-60708070 Msa0861400:intron
ATCTCCCAACAGGCCAAAAC+AGG 0.411214 5_4:-60706798 Msa0861400:CDS
GTTCTTTGTACAAATCTTGA+AGG 0.411816 5_4:-60708089 Msa0861400:CDS
ATCTGAAGAACGAGCTATAT+AGG 0.422804 5_4:+60709339 None:intergenic
TCAAGATTTGTACAAAGAAC+AGG 0.422918 5_4:+60708092 None:intergenic
GGAACTAAAGTCAGTATGTA+TGG 0.423140 5_4:+60706769 None:intergenic
CCTGCAGTGACACAAGAATC+AGG 0.423818 5_4:-60710334 Msa0861400:CDS
AGTTACTTGCATTCTTTGTT+GGG 0.425510 5_4:-60710296 Msa0861400:CDS
CGGCTCTGGCGGTGTATCAT+TGG 0.428881 5_4:-60710075 Msa0861400:intron
GGATAACACCATTCCATACT+AGG 0.432054 5_4:+60707887 None:intergenic
CATTGGAGCTGCTTGGAAGT+TGG 0.446073 5_4:+60708234 None:intergenic
GAAGGTCAATAGAAACAGAT+TGG 0.449338 5_4:+60706076 None:intergenic
CAATGGCCAGAAGAACTTTA+GGG 0.450193 5_4:-60709669 Msa0861400:CDS
GAAATATTGCAGGTAGGTGC+AGG 0.453044 5_4:-60710370 Msa0861400:intron
GATTGTCACCAACAGTTCCT+AGG 0.453386 5_4:+60707866 None:intergenic
CTGCAATGTCTTGGTCAGAT+AGG 0.453502 5_4:-60706383 Msa0861400:CDS
TTTGGAGGCATATGCTACTT+TGG 0.460980 5_4:-60709172 Msa0861400:CDS
TCAGTGTTAAATCTCCCAAC+AGG 0.465991 5_4:-60706808 Msa0861400:intron
ACAAATGAGAGTGCGATAAT+CGG 0.466385 5_4:+60708205 None:intergenic
AACAACCAAGAACCATTAGT+AGG 0.469226 5_4:+60706301 None:intergenic
AGTAGGGTTATCCTTCCTCC+TGG 0.469240 5_4:+60706318 None:intergenic
AGATTATGTCCAGGTATCAA+TGG 0.471981 5_4:-60709686 Msa0861400:intron
ATTTAAGGAACAAAGTTTGA+AGG 0.474256 5_4:+60706058 None:intergenic
TTAAAAGAGCATCAAAATGC+AGG 0.476813 5_4:+60708260 None:intergenic
GTCAACACCATGTGTGATCT+CGG 0.477231 5_4:-60710095 Msa0861400:CDS
GCGATAATCGGTATACTCAT+TGG 0.479827 5_4:+60708217 None:intergenic
TGCAGGAGTGCAATAATACT+AGG 0.483245 5_4:-60707934 Msa0861400:intron
AGTGAGAAGATCTCAACTAT+AGG 0.484893 5_4:+60707690 None:intergenic
GAGGCATATGCTACTTTGGA+AGG 0.486837 5_4:-60709168 Msa0861400:intron
ACCATGTGTGATCTCGGCTC+TGG 0.490461 5_4:-60710089 Msa0861400:CDS
CAGTGTTTATCAGACTATGC+AGG 0.490564 5_4:-60710767 Msa0861400:CDS
TCCAATAATGAGAGTATAAG+TGG 0.490618 5_4:+60706745 None:intergenic
AGGAAGGATAACCCTACTAA+TGG 0.492382 5_4:-60706313 Msa0861400:CDS
GTATGGAATGGTGTTATCCT+AGG 0.493772 5_4:-60707883 Msa0861400:CDS
GAAATCCTGCAGGTTGTGAC+AGG 0.502128 5_4:-60710140 Msa0861400:intron
TTATTCCAGCTGCAATGTCT+TGG 0.502595 5_4:-60706392 Msa0861400:CDS
CCTGATTCTTGTGTCACTGC+AGG 0.516721 5_4:+60710334 None:intergenic
TGTAATGGATCTAATCCCAT+TGG 0.516758 5_4:+60707844 None:intergenic
GTATACTCATTGGAGCTGCT+TGG 0.518050 5_4:+60708227 None:intergenic
CAACAGTTGAGATCTTCAAA+TGG 0.523385 5_4:-60707823 Msa0861400:CDS
CTGAAATAGTTCCAGGAGGA+AGG 0.527976 5_4:-60706329 Msa0861400:CDS
AGGCAATCAGAAGGGCGTAA+TGG 0.529231 5_4:+60709359 None:intergenic
CATACTAGGAACAGAATAAG+TGG 0.541570 5_4:+60707901 None:intergenic
GCAATTGCTACATCTTACAT+TGG 0.543378 5_4:-60707663 Msa0861400:CDS
AAAGTCAGTATGTATGGAAG+AGG 0.544155 5_4:+60706775 None:intergenic
TAGTCTGATAAACACTGCTC+AGG 0.547103 5_4:+60710773 None:intergenic
TCTGACCAAGACATTGCAGC+TGG 0.549499 5_4:+60706387 None:intergenic
AGAAGAACTTTAGGGACAGT+AGG 0.553655 5_4:-60709661 Msa0861400:CDS
GTTGAGTACACTTCAGATGA+AGG 0.560482 5_4:-60710744 Msa0861400:CDS
ACTGTTGGTGACAATCCAAT+GGG 0.561349 5_4:-60707859 Msa0861400:CDS
ATTCTGTTCCTAGTATGGAA+TGG 0.565218 5_4:-60707895 Msa0861400:CDS
AACTGTTGGTGACAATCCAA+TGG 0.566366 5_4:-60707860 Msa0861400:CDS
GACTTTGCTGGAACATATGG+AGG 0.569015 5_4:-60706697 Msa0861400:intron
ACAGTGTAAAGTTATTTAAG+GGG 0.575409 5_4:-60706139 Msa0861400:three_prime_UTR
TATAATACATACAGTCTGCA+AGG 0.577013 5_4:+60707616 None:intergenic
GAAGGCGTATTTGTTGTTTG+AGG 0.582166 5_4:-60710726 Msa0861400:intron
CAGTGTAAAGTTATTTAAGG+GGG 0.592473 5_4:-60706138 Msa0861400:three_prime_UTR
GGTGTTATCCTAGGAACTGT+TGG 0.594469 5_4:-60707874 Msa0861400:CDS
CTTTATTGGTGCAATTAATG+GGG 0.594696 5_4:-60708948 Msa0861400:CDS
AAATATTGCAGGTAGGTGCA+GGG 0.597429 5_4:-60710369 Msa0861400:intron
GAGCTATATAGGCAATCAGA+AGG 0.598567 5_4:+60709350 None:intergenic
CTATATTAGACAGTTGCAAG+TGG 0.602825 5_4:-60708286 Msa0861400:intron
AGTGCAATAATACTAGGCAC+TGG 0.606834 5_4:-60707928 Msa0861400:CDS
AGTGTTTATCAGACTATGCA+GGG 0.607145 5_4:-60710766 Msa0861400:CDS
ACAACCAAGAACCATTAGTA+GGG 0.608420 5_4:+60706302 None:intergenic
ATGTGTGATCTCGGCTCTGG+CGG 0.610785 5_4:-60710086 Msa0861400:CDS
TAATTGCACCAATAAAGCGC+TGG 0.615464 5_4:+60708954 None:intergenic
ATATGTTCCAGCAAAGTCCA+AGG 0.621878 5_4:+60706702 None:intergenic
GCCAGAGCCGAGATCACACA+TGG 0.623234 5_4:+60710088 None:intergenic
ATAAGTTGTAAAGAAATGGA+GGG 0.637500 5_4:-60710812 None:intergenic
AGCTATATAGGCAATCAGAA+GGG 0.643728 5_4:+60709351 None:intergenic
AATAATGAGAGTATAAGTGG+TGG 0.643933 5_4:+60706748 None:intergenic
CTACCTGAAATAGTTCCAGG+AGG 0.717690 5_4:-60706333 Msa0861400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAGATATTTAGAGATATTTT+AGG + chr5_4:60706927-60706946 None:intergenic 15.0%
!! TTACTAATACTAATCTAAAT+AGG + chr5_4:60707117-60707136 None:intergenic 15.0%
!! GAAAATTAAGACATAATTTA+AGG + chr5_4:60707566-60707585 None:intergenic 15.0%
!! TATAGTTTATGAATTCTATT+AGG + chr5_4:60708212-60708231 None:intergenic 15.0%
!! TGTAAAAAAATAACTTATTG+CGG - chr5_4:60709789-60709808 Msa0861400:intron 15.0%
!! AATTAAAATTAACATGGAAA+TGG + chr5_4:60710184-60710203 None:intergenic 15.0%
!! AATTGCAATTAAAATTAACA+TGG + chr5_4:60710190-60710209 None:intergenic 15.0%
!! TAAATTTCATCCAATATTTA+AGG + chr5_4:60710791-60710810 None:intergenic 15.0%
!! GAATTACATTCAAATGAAAA+GGG + chr5_4:60706314-60706333 None:intergenic 20.0%
!! TGAATTACATTCAAATGAAA+AGG + chr5_4:60706315-60706334 None:intergenic 20.0%
!! TTTCATTTGAATGTAATTCA+AGG - chr5_4:60706315-60706334 Msa0861400:CDS 20.0%
!!! TTATATTAATTTTTCAGCAG+AGG + chr5_4:60706654-60706673 None:intergenic 20.0%
!!! ATTATTTCTTAATTCCCTAA+AGG - chr5_4:60706781-60706800 Msa0861400:CDS 20.0%
!!! AGATATTTTAGGAACTAATA+TGG + chr5_4:60706916-60706935 None:intergenic 20.0%
!!! TTTTCAATTATGCAATAGTT+AGG - chr5_4:60707341-60707360 Msa0861400:intron 20.0%
!! TTTCAATTATGCAATAGTTA+GGG - chr5_4:60707342-60707361 Msa0861400:intron 20.0%
!!! TAATTTTCATATACTTTGTC+AGG - chr5_4:60707578-60707597 Msa0861400:intron 20.0%
!!! ACTTTGTTTTCATTGATTTT+TGG - chr5_4:60707641-60707660 Msa0861400:CDS 20.0%
!!! CTATTTTCCTAAATTATTAC+CGG + chr5_4:60707770-60707789 None:intergenic 20.0%
!!! AAGTTTTTCATGTCAAAATT+AGG - chr5_4:60707949-60707968 Msa0861400:intron 20.0%
!! GATAACATTGTTCTTATAAA+TGG - chr5_4:60708147-60708166 Msa0861400:intron 20.0%
!!! TCAAATTGATTTAGATTAGA+CGG - chr5_4:60708368-60708387 Msa0861400:intron 20.0%
!! ATATAAAATAAAATAACCGC+TGG + chr5_4:60708440-60708459 None:intergenic 20.0%
!!! TATGATAACGAAATATTACA+TGG - chr5_4:60708457-60708476 Msa0861400:intron 20.0%
!! TGCAAAAGAAAAAAACATTA+GGG + chr5_4:60708881-60708900 None:intergenic 20.0%
!!! AGGCTTTAAAAAATATTTCA+GGG + chr5_4:60710112-60710131 None:intergenic 20.0%
!!! AAGGCTTTAAAAAATATTTC+AGG + chr5_4:60710113-60710132 None:intergenic 20.0%
!!! TGAAATATTTTTTAAAGCCT+TGG - chr5_4:60710112-60710131 Msa0861400:CDS 20.0%
!!! AATGATGAATACTTTTTCAA+AGG + chr5_4:60710599-60710618 None:intergenic 20.0%
!!! AAAGTATTCATCATTTTACA+TGG - chr5_4:60710604-60710623 Msa0861400:intron 20.0%
!! AAACAGTGTAAAGTTATTTA+AGG - chr5_4:60710690-60710709 Msa0861400:intron 20.0%
!! AACAGTGTAAAGTTATTTAA+GGG - chr5_4:60710691-60710710 Msa0861400:intron 20.0%
!! AAACTTTGTTCCTTAAATAT+TGG - chr5_4:60710778-60710797 Msa0861400:CDS 20.0%
!!! ATTTTAGTATCGTTCCTTTA+GGG + chr5_4:60706798-60706817 None:intergenic 25.0%
! ACTAATCTAAATAGGTAGAA+TGG + chr5_4:60707109-60707128 None:intergenic 25.0%
!!! TTGTTTTCATTGATTTTTGG+AGG - chr5_4:60707644-60707663 Msa0861400:CDS 25.0%
!! ATACGTCTAATTTTTGTTGA+GGG + chr5_4:60708124-60708143 None:intergenic 25.0%
!! AATACGTCTAATTTTTGTTG+AGG + chr5_4:60708125-60708144 None:intergenic 25.0%
! CAACAAAAATTAGACGTATT+CGG - chr5_4:60708125-60708144 Msa0861400:intron 25.0%
! GCAAAATCACAAATAACAAA+TGG - chr5_4:60708243-60708262 Msa0861400:CDS 25.0%
! TTACACACTATAAACAATCT+CGG - chr5_4:60708300-60708319 Msa0861400:intron 25.0%
! CGAAATATTACATGGTTTAT+AGG - chr5_4:60708465-60708484 Msa0861400:intron 25.0%
! TGTTCAAAAATTGGAGATTA+AGG + chr5_4:60708666-60708685 None:intergenic 25.0%
!! AATCTCCAATTTTTGAACAA+TGG - chr5_4:60708667-60708686 Msa0861400:intron 25.0%
! TTTGTCCATTGTTCAAAAAT+TGG + chr5_4:60708675-60708694 None:intergenic 25.0%
! TTTAAGCAAAGAACAAAGAT+TGG + chr5_4:60708795-60708814 None:intergenic 25.0%
!!! TTTTTTTCCTCTTTAAGACT+TGG - chr5_4:60708824-60708843 Msa0861400:intron 25.0%
! AAATATTCCAAGTCTTAAAG+AGG + chr5_4:60708834-60708853 None:intergenic 25.0%
! CTGCAAAAGAAAAAAACATT+AGG + chr5_4:60708882-60708901 None:intergenic 25.0%
!!! CTAATGTTTTTTTCTTTTGC+AGG - chr5_4:60708880-60708899 Msa0861400:intron 25.0%
!!! ATCTTACATTGGATTTGTTT+TGG - chr5_4:60709179-60709198 Msa0861400:CDS 25.0%
!!! TCTTACATTGGATTTGTTTT+GGG - chr5_4:60709180-60709199 Msa0861400:CDS 25.0%
! CAATAGATAAGAAAGAAGTT+GGG + chr5_4:60709244-60709263 None:intergenic 25.0%
! TCAATAGATAAGAAAGAAGT+TGG + chr5_4:60709245-60709264 None:intergenic 25.0%
!! TCTATTGATTAAAGCTAATG+CGG - chr5_4:60709257-60709276 Msa0861400:intron 25.0%
! TCATTAGATAAAATGCAAGT+GGG + chr5_4:60709360-60709379 None:intergenic 25.0%
! TTCATTAGATAAAATGCAAG+TGG + chr5_4:60709361-60709380 None:intergenic 25.0%
! AAGAAAGATCGAATTTCTTT+GGG - chr5_4:60709421-60709440 Msa0861400:intron 25.0%
! TTCACTAAAATACAATCGTA+TGG - chr5_4:60709456-60709475 Msa0861400:intron 25.0%
! GTTACACTTCAAAAATTGTA+TGG + chr5_4:60709582-60709601 None:intergenic 25.0%
! TATAACTCTTGGAAAAATGT+CGG + chr5_4:60709604-60709623 None:intergenic 25.0%
! ATACCTATAACACATGATTA+CGG + chr5_4:60709638-60709657 None:intergenic 25.0%
! TGTGTTATAGGTATTTGTAA+TGG - chr5_4:60709644-60709663 Msa0861400:intron 25.0%
! TACAAATTGATGTCAAATAG+AGG + chr5_4:60709773-60709792 None:intergenic 25.0%
!! TTTAAAATGTGCAACATACT+TGG + chr5_4:60709942-60709961 None:intergenic 25.0%
!!! TGTTGCACATTTTAAAGATT+AGG - chr5_4:60709946-60709965 Msa0861400:intron 25.0%
! TCTGTGAGATAAATAAAGTT+AGG - chr5_4:60710266-60710285 Msa0861400:intron 25.0%
! ACAAACAGAAACAAACAAAA+AGG + chr5_4:60710643-60710662 None:intergenic 25.0%
! ACAGTGTAAAGTTATTTAAG+GGG - chr5_4:60710692-60710711 Msa0861400:intron 25.0%
! ATTTAAGGAACAAAGTTTGA+AGG + chr5_4:60710776-60710795 None:intergenic 25.0%
!!! TTTCGACTTTTTCGTAATTG+CGG - chr5_4:60706383-60706402 Msa0861400:CDS 30.0%
TTAGCATTTGAGTGAAATGA+TGG + chr5_4:60706441-60706460 None:intergenic 30.0%
CAAATGCTAAGAAATATTGC+AGG - chr5_4:60706451-60706470 Msa0861400:intron 30.0%
AGTTACTTGCATTCTTTGTT+GGG - chr5_4:60706535-60706554 Msa0861400:intron 30.0%
TTGTAAGAAGCAAAATCATG+AGG + chr5_4:60706582-60706601 None:intergenic 30.0%
!! GATTTTAGTATCGTTCCTTT+AGG + chr5_4:60706799-60706818 None:intergenic 30.0%
!!! TATTCTCATAACTTTTTCGC+TGG + chr5_4:60706821-60706840 None:intergenic 30.0%
TAGGAACTAATATGGTAAAG+TGG + chr5_4:60706908-60706927 None:intergenic 30.0%
TCTAAATAGGTAGAATGGAA+AGG + chr5_4:60707104-60707123 None:intergenic 30.0%
ACTTGATTTAGATTATGTCC+AGG - chr5_4:60707136-60707155 Msa0861400:intron 30.0%
ATTTAATGCAAGCAAACTGT+TGG - chr5_4:60707233-60707252 Msa0861400:intron 30.0%
! CACTTTGATTTAAGAGAAAC+GGG + chr5_4:60707310-60707329 None:intergenic 30.0%
! CCACTTTGATTTAAGAGAAA+CGG + chr5_4:60707311-60707330 None:intergenic 30.0%
! GATATCTTGACGAATTTTCT+TGG - chr5_4:60707512-60707531 Msa0861400:intron 30.0%
! ATAATTTAAGGCCTAGTTAG+TGG + chr5_4:60707554-60707573 None:intergenic 30.0%
! TTTTCATATACTTTGTCAGG+AGG - chr5_4:60707581-60707600 Msa0861400:intron 30.0%
! GCTTTATTGGTGCAATTAAT+GGG - chr5_4:60707882-60707901 Msa0861400:CDS 30.0%
CTTTATTGGTGCAATTAATG+GGG - chr5_4:60707883-60707902 Msa0861400:CDS 30.0%
AGTAAACTTCATATGATCTG+TGG - chr5_4:60708050-60708069 Msa0861400:intron 30.0%
! TACGTCTAATTTTTGTTGAG+GGG + chr5_4:60708123-60708142 None:intergenic 30.0%
ACATTGTTCTTATAAATGGC+AGG - chr5_4:60708151-60708170 Msa0861400:intron 30.0%
TACACACTATAAACAATCTC+GGG - chr5_4:60708301-60708320 Msa0861400:intron 30.0%
!! AATCTCGGGATATTATTTTG+CGG - chr5_4:60708315-60708334 Msa0861400:intron 30.0%
!! TTAAAAGAGCATCAAAATGC+AGG + chr5_4:60708574-60708593 None:intergenic 30.0%
TCAAGATTTGTACAAAGAAC+AGG + chr5_4:60708742-60708761 None:intergenic 30.0%
GTTCTTTGTACAAATCTTGA+AGG - chr5_4:60708742-60708761 Msa0861400:intron 30.0%
!! AAGGAGACTTGTTAAAAGTA+AGG - chr5_4:60708761-60708780 Msa0861400:intron 30.0%
AGATCTTCAAATGGAACAAT+TGG - chr5_4:60709017-60709036 Msa0861400:intron 30.0%
TGCAGTAGTAGCTAAAAAAA+TGG + chr5_4:60709062-60709081 None:intergenic 30.0%
TATAATACATACAGTCTGCA+AGG + chr5_4:60709218-60709237 None:intergenic 30.0%
CAAGAAAGATCGAATTTCTT+TGG - chr5_4:60709420-60709439 Msa0861400:intron 30.0%
ACAATCGTATGGAATAAAGA+AGG - chr5_4:60709467-60709486 Msa0861400:intron 30.0%
CAATCGTATGGAATAAAGAA+GGG - chr5_4:60709468-60709487 Msa0861400:intron 30.0%
TCAACATAATTCGTTATGCT+TGG + chr5_4:60709548-60709567 None:intergenic 30.0%
TCGTAATGACATATAACTCT+TGG + chr5_4:60709615-60709634 None:intergenic 30.0%
AATAACTTATTGCGGAACAA+TGG - chr5_4:60709797-60709816 Msa0861400:intron 30.0%
! AATAATGAGAGTATAAGTGG+TGG + chr5_4:60710086-60710105 None:intergenic 30.0%
ACCACTTATACTCTCATTAT+TGG - chr5_4:60710085-60710104 Msa0861400:CDS 30.0%
! TCCAATAATGAGAGTATAAG+TGG + chr5_4:60710089-60710108 None:intergenic 30.0%
TTAGTTAAGAGCGAATTGTT+CGG + chr5_4:60710331-60710350 None:intergenic 30.0%
TTCGCTCTTAACTAAAGTTT+AGG - chr5_4:60710336-60710355 Msa0861400:CDS 30.0%
CAGTGTAAAGTTATTTAAGG+GGG - chr5_4:60710693-60710712 Msa0861400:intron 30.0%
AGTGTTTATCAGACTATGCA+GGG - chr5_4:60706065-60706084 Msa0861400:three_prime_UTR 35.0%
TCCGATATCGATATCTTATG+CGG - chr5_4:60706220-60706239 Msa0861400:three_prime_UTR 35.0%
ACCGCATAAGATATCGATAT+CGG + chr5_4:60706224-60706243 None:intergenic 35.0%
TGCTAAGAAATATTGCAGGT+AGG - chr5_4:60706455-60706474 Msa0861400:intron 35.0%
CAGTTACTTGCATTCTTTGT+TGG - chr5_4:60706534-60706553 Msa0861400:intron 35.0%
AATATGGTAAAGTGGCATCA+TGG + chr5_4:60706900-60706919 None:intergenic 35.0%
! CACTTGTGCATTCTATCTTT+TGG - chr5_4:60707053-60707072 Msa0861400:intron 35.0%
AGATTATGTCCAGGTATCAA+TGG - chr5_4:60707145-60707164 Msa0861400:intron 35.0%
CAGTAGGAGTTCAAATTTCA+TGG - chr5_4:60707186-60707205 Msa0861400:intron 35.0%
TCAACATGCGTAACATAACA+CGG - chr5_4:60707259-60707278 Msa0861400:intron 35.0%
CCGTTTCTCTTAAATCAAAG+TGG - chr5_4:60707308-60707327 Msa0861400:intron 35.0%
! CAATGTGATTTTGTTGCAGT+TGG - chr5_4:60707435-60707454 Msa0861400:intron 35.0%
AGCTATATAGGCAATCAGAA+GGG + chr5_4:60707483-60707502 None:intergenic 35.0%
ATCTGAAGAACGAGCTATAT+AGG + chr5_4:60707495-60707514 None:intergenic 35.0%
TTGAATGTAAGCACATGCTT+CGG - chr5_4:60707796-60707815 Msa0861400:intron 35.0%
! CGCTTTATTGGTGCAATTAA+TGG - chr5_4:60707881-60707900 Msa0861400:CDS 35.0%
! ATTAATGGGGTTCTAGTAGT+TGG - chr5_4:60707896-60707915 Msa0861400:CDS 35.0%
TTAGATTAGACGGTTGAGAT+TGG - chr5_4:60708378-60708397 Msa0861400:intron 35.0%
CTATATTAGACAGTTGCAAG+TGG - chr5_4:60708545-60708564 Msa0861400:intron 35.0%
! ACAAATGAGAGTGCGATAAT+CGG + chr5_4:60708629-60708648 None:intergenic 35.0%
CATACTAGGAACAGAATAAG+TGG + chr5_4:60708933-60708952 None:intergenic 35.0%
CACTTATTCTGTTCCTAGTA+TGG - chr5_4:60708931-60708950 Msa0861400:CDS 35.0%
ATTCTGTTCCTAGTATGGAA+TGG - chr5_4:60708936-60708955 Msa0861400:CDS 35.0%
!! TGTAATGGATCTAATCCCAT+TGG + chr5_4:60708990-60709009 None:intergenic 35.0%
GAAGATCTCAACTGTTGTAA+TGG + chr5_4:60709005-60709024 None:intergenic 35.0%
CAACAGTTGAGATCTTCAAA+TGG - chr5_4:60709008-60709027 Msa0861400:intron 35.0%
AGGCTGCAGAATCAAATTAA+GGG + chr5_4:60709124-60709143 None:intergenic 35.0%
TAGGCTGCAGAATCAAATTA+AGG + chr5_4:60709125-60709144 None:intergenic 35.0%
AGTGAGAAGATCTCAACTAT+AGG + chr5_4:60709144-60709163 None:intergenic 35.0%
GCAATTGCTACATCTTACAT+TGG - chr5_4:60709168-60709187 Msa0861400:intron 35.0%
TATCTAATGAAAGCGAGTGT+CGG - chr5_4:60709370-60709389 Msa0861400:CDS 35.0%
! TGGCTAATGTGCACAAATTT+TGG + chr5_4:60709528-60709547 None:intergenic 35.0%
TTTGTAATGGTCTTTGCCTT+TGG - chr5_4:60709657-60709676 Msa0861400:CDS 35.0%
TTATGCAATGTTGTCAACTG+TGG - chr5_4:60709704-60709723 Msa0861400:intron 35.0%
! AATTTGCTCAAATACCACTG+TGG - chr5_4:60709821-60709840 Msa0861400:intron 35.0%
AGCCTAAAGTTGTCAAATAG+CGG + chr5_4:60709882-60709901 None:intergenic 35.0%
TTGGTTATTAAGCATGCAAG+AGG + chr5_4:60709923-60709942 None:intergenic 35.0%
AAAGTCAGTATGTATGGAAG+AGG + chr5_4:60710059-60710078 None:intergenic 35.0%
GGAACTAAAGTCAGTATGTA+TGG + chr5_4:60710065-60710084 None:intergenic 35.0%
TAGTTAAGAGCGAATTGTTC+GGG + chr5_4:60710330-60710349 None:intergenic 35.0%
AAACTACCTGAAATAGTTCC+AGG - chr5_4:60710495-60710514 Msa0861400:intron 35.0%
ATAACCCTACTAATGGTTCT+TGG - chr5_4:60710525-60710544 Msa0861400:intron 35.0%
ACAACCAAGAACCATTAGTA+GGG + chr5_4:60710532-60710551 None:intergenic 35.0%
AACAACCAAGAACCATTAGT+AGG + chr5_4:60710533-60710552 None:intergenic 35.0%
!!! AGGGGGTATTTTAGAGAAAA+TGG - chr5_4:60710710-60710729 Msa0861400:intron 35.0%
GAAGGTCAATAGAAACAGAT+TGG + chr5_4:60710758-60710777 None:intergenic 35.0%
TAGTCTGATAAACACTGCTC+AGG + chr5_4:60706061-60706080 None:intergenic 40.0%
CAGTGTTTATCAGACTATGC+AGG - chr5_4:60706064-60706083 Msa0861400:three_prime_UTR 40.0%
GTTGAGTACACTTCAGATGA+AGG - chr5_4:60706087-60706106 Msa0861400:three_prime_UTR 40.0%
!! GAAGGCGTATTTGTTGTTTG+AGG - chr5_4:60706105-60706124 Msa0861400:three_prime_UTR 40.0%
! ATGATGCACTGACACAAACA+TGG + chr5_4:60706249-60706268 None:intergenic 40.0%
AATGCATAGCTGCAAAACGT+GGG - chr5_4:60706355-60706374 Msa0861400:CDS 40.0%
AAATATTGCAGGTAGGTGCA+GGG - chr5_4:60706462-60706481 Msa0861400:intron 40.0%
CATTCTTTGTTGGGCATTCA+TGG - chr5_4:60706544-60706563 Msa0861400:intron 40.0%
TCAATGGCCAGAAGAACTTT+AGG - chr5_4:60707161-60707180 Msa0861400:intron 40.0%
CAATGGCCAGAAGAACTTTA+GGG - chr5_4:60707162-60707181 Msa0861400:intron 40.0%
TACTGTCCCTAAAGTTCTTC+TGG + chr5_4:60707171-60707190 None:intergenic 40.0%
! AGAAGAACTTTAGGGACAGT+AGG - chr5_4:60707170-60707189 Msa0861400:intron 40.0%
TTAAGAGAAACGGGAACAAC+TGG + chr5_4:60707301-60707320 None:intergenic 40.0%
TGCAATAGTTAGGGTTACAG+AGG - chr5_4:60707351-60707370 Msa0861400:intron 40.0%
GCAATAGTTAGGGTTACAGA+GGG - chr5_4:60707352-60707371 Msa0861400:intron 40.0%
GAGCTATATAGGCAATCAGA+AGG + chr5_4:60707484-60707503 None:intergenic 40.0%
! CTAGTTAGTGGCTTGTACAT+GGG + chr5_4:60707542-60707561 None:intergenic 40.0%
! TTTGGAGGCATATGCTACTT+TGG - chr5_4:60707659-60707678 Msa0861400:CDS 40.0%
GGAGACACCGGTAATAATTT+AGG - chr5_4:60707760-60707779 Msa0861400:intron 40.0%
CTCTAGTCTCTCACACATAA+CGG + chr5_4:60707829-60707848 None:intergenic 40.0%
ATTTGTAGCCAGCGCTTTAT+TGG - chr5_4:60707869-60707888 Msa0861400:CDS 40.0%
TAATTGCACCAATAAAGCGC+TGG + chr5_4:60707880-60707899 None:intergenic 40.0%
!! GATATTATTTTGCGGCTGGA+CGG - chr5_4:60708323-60708342 Msa0861400:intron 40.0%
GCGATAATCGGTATACTCAT+TGG + chr5_4:60708617-60708636 None:intergenic 40.0%
TGGAGATTAAGGAAGTTACC+TGG + chr5_4:60708655-60708674 None:intergenic 40.0%
! TGCAGGAGTGCAATAATACT+AGG - chr5_4:60708897-60708916 Msa0861400:intron 40.0%
AGTGCAATAATACTAGGCAC+TGG - chr5_4:60708903-60708922 Msa0861400:intron 40.0%
GGATAACACCATTCCATACT+AGG + chr5_4:60708947-60708966 None:intergenic 40.0%
!! GTATGGAATGGTGTTATCCT+AGG - chr5_4:60708948-60708967 Msa0861400:CDS 40.0%
!! AACTGTTGGTGACAATCCAA+TGG - chr5_4:60708971-60708990 Msa0861400:intron 40.0%
!! ACTGTTGGTGACAATCCAAT+GGG - chr5_4:60708972-60708991 Msa0861400:intron 40.0%
GAGTGTGTCAGACATATTTC+TGG + chr5_4:60709311-60709330 None:intergenic 40.0%
CGACCGTAATCATGTGTTAT+AGG - chr5_4:60709632-60709651 Msa0861400:intron 40.0%
ATGTTGTCAACTGTGGATAG+TGG - chr5_4:60709711-60709730 Msa0861400:intron 40.0%
!! CTGTGGATAGTGGAAAATAG+CGG - chr5_4:60709721-60709740 Msa0861400:intron 40.0%
TCAAATACCACTGTGGTCTA+CGG - chr5_4:60709828-60709847 Msa0861400:intron 40.0%
AGCCGCTATTTGACAACTTT+AGG - chr5_4:60709877-60709896 Msa0861400:intron 40.0%
TCAGTGTTAAATCTCCCAAC+AGG - chr5_4:60710023-60710042 Msa0861400:intron 40.0%
! TTTAAAGCCTTGGACTTTGC+TGG - chr5_4:60710122-60710141 Msa0861400:CDS 40.0%
ATATGTTCCAGCAAAGTCCA+AGG + chr5_4:60710132-60710151 None:intergenic 40.0%
TTGGACTTTGCTGGAACATA+TGG - chr5_4:60710131-60710150 Msa0861400:CDS 40.0%
TTTATCTCACAGACGAACTC+CGG + chr5_4:60710259-60710278 None:intergenic 40.0%
TTTCAGCCTGAATTCGAACT+CGG - chr5_4:60710299-60710318 Msa0861400:CDS 40.0%
TTATTCCAGCTGCAATGTCT+TGG - chr5_4:60710439-60710458 Msa0861400:intron 40.0%
AGGAAGGATAACCCTACTAA+TGG - chr5_4:60710518-60710537 Msa0861400:intron 40.0%
CTAATGGTTCTTGGTTGTTC+AGG - chr5_4:60710534-60710553 Msa0861400:intron 40.0%
CAATGCATAGCTGCAAAACG+TGG - chr5_4:60706354-60706373 Msa0861400:CDS 45.0%
GAAATATTGCAGGTAGGTGC+AGG - chr5_4:60706461-60706480 Msa0861400:intron 45.0%
CATCTGATGAGAAATCCTGC+AGG - chr5_4:60706681-60706700 Msa0861400:intron 45.0%
GTCAACACCATGTGTGATCT+CGG - chr5_4:60706736-60706755 Msa0861400:CDS 45.0%
TTCTTCTGGCCATTGATACC+TGG + chr5_4:60707157-60707176 None:intergenic 45.0%
! CCTAGTTAGTGGCTTGTACA+TGG + chr5_4:60707543-60707562 None:intergenic 45.0%
CCATGTACAAGCCACTAACT+AGG - chr5_4:60707540-60707559 Msa0861400:intron 45.0%
CTTTGTCAGGAGGCTAATAC+CGG - chr5_4:60707591-60707610 Msa0861400:intron 45.0%
!!! ACCGGCATTTTGGTTACAGA+TGG - chr5_4:60707609-60707628 Msa0861400:intron 45.0%
CCCATCTGTAACCAAAATGC+CGG + chr5_4:60707613-60707632 None:intergenic 45.0%
!!! CCGGCATTTTGGTTACAGAT+GGG - chr5_4:60707610-60707629 Msa0861400:intron 45.0%
!! GAGGCATATGCTACTTTGGA+AGG - chr5_4:60707663-60707682 Msa0861400:CDS 45.0%
!!! CAGCTTTTTTGCAGCTCTTG+TGG - chr5_4:60707925-60707944 Msa0861400:CDS 45.0%
!! TCGGGATATTATTTTGCGGC+TGG - chr5_4:60708319-60708338 Msa0861400:intron 45.0%
TGCGTGATGAAGTTACTGCA+TGG - chr5_4:60708405-60708424 Msa0861400:intron 45.0%
TGCATGGAATCTGTTTCCAG+CGG - chr5_4:60708421-60708440 Msa0861400:intron 45.0%
GTATACTCATTGGAGCTGCT+TGG + chr5_4:60708607-60708626 None:intergenic 45.0%
CGCACTCTCATTTGTTTACC+AGG - chr5_4:60708634-60708653 Msa0861400:intron 45.0%
! GGTGTTATCCTAGGAACTGT+TGG - chr5_4:60708957-60708976 Msa0861400:CDS 45.0%
GATTGTCACCAACAGTTCCT+AGG + chr5_4:60708968-60708987 None:intergenic 45.0%
GACACATGCTAGACTACCAA+AGG + chr5_4:60709676-60709695 None:intergenic 45.0%
! TGTATGGAAGAGGCCTGTTT+TGG + chr5_4:60710049-60710068 None:intergenic 45.0%
GACTTTGCTGGAACATATGG+AGG - chr5_4:60710134-60710153 Msa0861400:intron 45.0%
TCCTTAACCCTCCAGTTTCT+TGG - chr5_4:60710214-60710233 Msa0861400:intron 45.0%
CCTTAACCCTCCAGTTTCTT+GGG - chr5_4:60710215-60710234 Msa0861400:intron 45.0%
CTTAACCCTCCAGTTTCTTG+GGG - chr5_4:60710216-60710235 Msa0861400:intron 45.0%
TTCAGCCTGAATTCGAACTC+GGG - chr5_4:60710300-60710319 Msa0861400:CDS 45.0%
GAAAACCCGAGTTCGAATTC+AGG + chr5_4:60710308-60710327 None:intergenic 45.0%
!!! CTGATAGTGCTGCTGCTTTT+CGG - chr5_4:60710414-60710433 Msa0861400:intron 45.0%
CTGCAATGTCTTGGTCAGAT+AGG - chr5_4:60710448-60710467 Msa0861400:intron 45.0%
CTACCTGAAATAGTTCCAGG+AGG - chr5_4:60710498-60710517 Msa0861400:intron 45.0%
CTTCCTCCTGGAACTATTTC+AGG + chr5_4:60710504-60710523 None:intergenic 45.0%
CTGAAATAGTTCCAGGAGGA+AGG - chr5_4:60710502-60710521 Msa0861400:intron 45.0%
! CCTGATTCTTGTGTCACTGC+AGG + chr5_4:60706500-60706519 None:intergenic 50.0%
CCTGCAGTGACACAAGAATC+AGG - chr5_4:60706497-60706516 Msa0861400:intron 50.0%
GAAATCCTGCAGGTTGTGAC+AGG - chr5_4:60706691-60706710 Msa0861400:intron 50.0%
AACACGGCTTCATCAGAGCT+CGG - chr5_4:60707275-60707294 Msa0861400:intron 50.0%
! AGGCAATCAGAAGGGCGTAA+TGG + chr5_4:60707475-60707494 None:intergenic 50.0%
! GGAGGCTAATACCGGCATTT+TGG - chr5_4:60707599-60707618 Msa0861400:intron 50.0%
CTGACACAGTGACACTGACA+CGG - chr5_4:60707739-60707758 Msa0861400:intron 50.0%
CATTGGAGCTGCTTGGAAGT+TGG + chr5_4:60708600-60708619 None:intergenic 50.0%
ATACCACTGTGGTCTACGGA+CGG - chr5_4:60709832-60709851 Msa0861400:intron 50.0%
ATCTCCCAACAGGCCAAAAC+AGG - chr5_4:60710033-60710052 Msa0861400:intron 50.0%
CCCAAGAAACTGGAGGGTTA+AGG + chr5_4:60710218-60710237 None:intergenic 50.0%
TCCTTCCCCAAGAAACTGGA+GGG + chr5_4:60710224-60710243 None:intergenic 50.0%
AGACGAACTCCGGATTCTCA+GGG + chr5_4:60710249-60710268 None:intergenic 50.0%
TCTGACCAAGACATTGCAGC+TGG + chr5_4:60710447-60710466 None:intergenic 50.0%
AGTAGGGTTATCCTTCCTCC+TGG + chr5_4:60710516-60710535 None:intergenic 50.0%
GCAAACCTGTCACAACCTGC+AGG + chr5_4:60706699-60706718 None:intergenic 55.0%
ACCATGTGTGATCTCGGCTC+TGG - chr5_4:60706742-60706761 Msa0861400:CDS 55.0%
! ATGTGTGATCTCGGCTCTGG+CGG - chr5_4:60706745-60706764 Msa0861400:CDS 55.0%
TGACACTGACACGGAGACAC+CGG - chr5_4:60707748-60707767 Msa0861400:intron 55.0%
ATACCGTCCGTAGACCACAG+TGG + chr5_4:60709838-60709857 None:intergenic 55.0%
!!! GAGGCCTGTTTTGGCCTGTT+GGG + chr5_4:60710040-60710059 None:intergenic 55.0%
!!! AGAGGCCTGTTTTGGCCTGT+TGG + chr5_4:60710041-60710060 None:intergenic 55.0%
ACCCTCCAGTTTCTTGGGGA+AGG - chr5_4:60710220-60710239 Msa0861400:intron 55.0%
CTCCTTCCCCAAGAAACTGG+AGG + chr5_4:60710225-60710244 None:intergenic 55.0%
CTCCAGTTTCTTGGGGAAGG+AGG - chr5_4:60710223-60710242 Msa0861400:intron 55.0%
CAGACGAACTCCGGATTCTC+AGG + chr5_4:60710250-60710269 None:intergenic 55.0%
GCCAGAGCCGAGATCACACA+TGG + chr5_4:60706746-60706765 None:intergenic 60.0%
! CGGCTCTGGCGGTGTATCAT+TGG - chr5_4:60706756-60706775 Msa0861400:CDS 60.0%
GGCCTCCTTCCCCAAGAAAC+TGG + chr5_4:60710228-60710247 None:intergenic 60.0%
GGAAGGAGGCCCTGAGAATC+CGG - chr5_4:60710237-60710256 Msa0861400:intron 60.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 60706034 60710819 60706034 ID=Msa0861400;Name=Msa0861400
chr5_4 mRNA 60706034 60710819 60706034 ID=Msa0861400-mRNA-1;Parent=Msa0861400;Name=Msa0861400-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0.91|0.92|1|1|1|13|217|405
chr5_4 exon 60706034 60706432 60706034 ID=Msa0861400-mRNA-1:exon:18751;Parent=Msa0861400-mRNA-1
chr5_4 exon 60706698 60706826 60706698 ID=Msa0861400-mRNA-1:exon:18750;Parent=Msa0861400-mRNA-1
chr5_4 exon 60707628 60707712 60707628 ID=Msa0861400-mRNA-1:exon:18749;Parent=Msa0861400-mRNA-1
chr5_4 exon 60707813 60707951 60707813 ID=Msa0861400-mRNA-1:exon:18748;Parent=Msa0861400-mRNA-1
chr5_4 exon 60708071 60708123 60708071 ID=Msa0861400-mRNA-1:exon:18747;Parent=Msa0861400-mRNA-1
chr5_4 exon 60708198 60708299 60708198 ID=Msa0861400-mRNA-1:exon:18746;Parent=Msa0861400-mRNA-1
chr5_4 exon 60708907 60708976 60708907 ID=Msa0861400-mRNA-1:exon:18745;Parent=Msa0861400-mRNA-1
chr5_4 exon 60709169 60709225 60709169 ID=Msa0861400-mRNA-1:exon:18744;Parent=Msa0861400-mRNA-1
chr5_4 exon 60709310 60709399 60709310 ID=Msa0861400-mRNA-1:exon:18743;Parent=Msa0861400-mRNA-1
chr5_4 exon 60709646 60709695 60709646 ID=Msa0861400-mRNA-1:exon:18742;Parent=Msa0861400-mRNA-1
chr5_4 exon 60710076 60710150 60710076 ID=Msa0861400-mRNA-1:exon:18741;Parent=Msa0861400-mRNA-1
chr5_4 exon 60710288 60710380 60710288 ID=Msa0861400-mRNA-1:exon:18740;Parent=Msa0861400-mRNA-1
chr5_4 exon 60710727 60710819 60710727 ID=Msa0861400-mRNA-1:exon:18739;Parent=Msa0861400-mRNA-1
chr5_4 CDS 60710727 60710819 60710727 ID=Msa0861400-mRNA-1:cds;Parent=Msa0861400-mRNA-1
chr5_4 CDS 60710288 60710380 60710288 ID=Msa0861400-mRNA-1:cds;Parent=Msa0861400-mRNA-1
chr5_4 CDS 60710076 60710150 60710076 ID=Msa0861400-mRNA-1:cds;Parent=Msa0861400-mRNA-1
chr5_4 CDS 60709646 60709695 60709646 ID=Msa0861400-mRNA-1:cds;Parent=Msa0861400-mRNA-1
chr5_4 CDS 60709310 60709399 60709310 ID=Msa0861400-mRNA-1:cds;Parent=Msa0861400-mRNA-1
chr5_4 CDS 60709169 60709225 60709169 ID=Msa0861400-mRNA-1:cds;Parent=Msa0861400-mRNA-1
chr5_4 CDS 60708907 60708976 60708907 ID=Msa0861400-mRNA-1:cds;Parent=Msa0861400-mRNA-1
chr5_4 CDS 60708198 60708299 60708198 ID=Msa0861400-mRNA-1:cds;Parent=Msa0861400-mRNA-1
chr5_4 CDS 60708071 60708123 60708071 ID=Msa0861400-mRNA-1:cds;Parent=Msa0861400-mRNA-1
chr5_4 CDS 60707813 60707951 60707813 ID=Msa0861400-mRNA-1:cds;Parent=Msa0861400-mRNA-1
chr5_4 CDS 60707628 60707712 60707628 ID=Msa0861400-mRNA-1:cds;Parent=Msa0861400-mRNA-1
chr5_4 CDS 60706698 60706826 60706698 ID=Msa0861400-mRNA-1:cds;Parent=Msa0861400-mRNA-1
chr5_4 CDS 60706251 60706432 60706251 ID=Msa0861400-mRNA-1:cds;Parent=Msa0861400-mRNA-1
chr5_4 three_prime_UTR 60706034 60706250 60706034 ID=Msa0861400-mRNA-1:three_prime_utr;Parent=Msa0861400-mRNA-1
Gene Sequence

>Msa0861400

ATGGAGGGAGTATTAGTTACTAGACCTGAGCAGTGTTTATCAGACTATGCAGGGTTGAGTACACTTCAGATGAAGGCGTATTTGTTGTTTGAGGTAGGTGCAGGGATACTTGCAATTCCTGCAGTGACACAAGAATCAGGCTTTTTAGCATCAACAGTTACTTGCATTCTTTGTTGGGCATTCATGGTTGTGACAGGTTTGCTCGTTGCAGAAGTAAATGTCAACACCATGTGTGATCTCGGCTCTGGCGGTGTATCATTGGTATCAATGGCCAGAAGAACTTTAGGGACAGTAGGAGTTCAAATTTCATGTTGGTCATACATCTTCATCCATTACGCCCTTCTGATTGCCTATATAGCTCGTTCTTCAGATATCTTGACGAATTTTCTTGGCATTCCCATATGGGAAAGTGCAACTTTGTTTTCATTGATTTTTGGAGGCATATGCTACTTTGGAAGCCAGCGCTTTATTGGTGCAATTAATGGGGTTCTAGTAGTTGGAATCATCAGCTTTTTTGCAGCTCTTGTGACAGTTGCAAGTGGAAACCTGCATTTTGATGCTCTTTTAAAAGCCAACTTCCAAGCAGCTCCAATGAGTATACCGATTATCGCACTCTCATTTGTTTACCAGAATGTAGTACCTGTTCTTTGTACAAATCTTGAAGGAGACTTGTTAAAAGTAAGGAGTGCAATAATACTAGGCACTGGTATACCACTTATTCTGTTCCTAGTATGGAATGGTGTTATCCTAGGAACTGTTGGTGACAATCCAATGGGATTAGATCCATTACAACAGTTGAGATCTTCAAATGGAACAATTGGACCTATAGTTGAGATCTTCTCACTGCTTGCAATTGCTACATCTTACATTGGATTTGTTTTGGGTTTGACAGACTTCCTTGCAGACTTGTTAAATCTCCCAACAGGCCAAAACAGGCCTCTTCCATACATACTGACTTTAGTTCCACCACTTATACTCTCATTATTGGACCCTGAAATATTTTTTAAAGCCTTGGACTTTGCTGGAACATATGGAGTGCTGCTGCTTTTCGGAGTTATTCCAGCTGCAATGTCTTGGTCAGATAGGAACTCAAATTCAACTTCATCTGTGAAACTACCTGAAATAGTTCCAGGAGGAAGGATAACCCTACTAATGGTTCTTGGTTGTTCAGGATATGTTATTCTTTCTGAATTATTTGAGAACTTGCAGCACCTTTGA

Protein sequence

>Msa0861400

MEGVLVTRPEQCLSDYAGLSTLQMKAYLLFEVGAGILAIPAVTQESGFLASTVTCILCWAFMVVTGLLVAEVNVNTMCDLGSGGVSLVSMARRTLGTVGVQISCWSYIFIHYALLIAYIARSSDILTNFLGIPIWESATLFSLIFGGICYFGSQRFIGAINGVLVVGIISFFAALVTVASGNLHFDALLKANFQAAPMSIPIIALSFVYQNVVPVLCTNLEGDLLKVRSAIILGTGIPLILFLVWNGVILGTVGDNPMGLDPLQQLRSSNGTIGPIVEIFSLLAIATSYIGFVLGLTDFLADLLNLPTGQNRPLPYILTLVPPLILSLLDPEIFFKALDFAGTYGVLLLFGVIPAAMSWSDRNSNSTSSVKLPEIVPGGRITLLMVLGCSGYVILSELFENLQHL*