Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1179020 | RHN39387.1 | 44.231 | 104 | 34 | 3 | 1 | 80 | 47 | 150 | 5.17e-11 | 72.8 |
| Msa1179020 | RHN39387.1 | 81.034 | 116 | 19 | 1 | 161 | 273 | 1 | 116 | 1.03e-58 | 197 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1179020 | A0A396GKU8 | 44.231 | 104 | 34 | 3 | 1 | 80 | 47 | 150 | 2.47e-11 | 72.8 |
| Msa1179020 | A0A396GKU8 | 81.034 | 116 | 19 | 1 | 161 | 273 | 1 | 116 | 4.91e-59 | 197 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1179020 | 0.853104 | 2.978951e-61 | -8.615850e-47 |
| Msa0067150 | Msa1179020 | -0.813334 | 2.697273e-51 | -8.615850e-47 |
| Msa0100910 | Msa1179020 | -0.801496 | 8.760843e-49 | -8.615850e-47 |
| Msa0609970 | Msa1179020 | -0.814623 | 1.401975e-51 | -8.615850e-47 |
| Msa0617830 | Msa1179020 | -0.800181 | 1.625803e-48 | -8.615850e-47 |
| Msa0618010 | Msa1179020 | -0.818683 | 1.724787e-52 | -8.615850e-47 |
| Msa0620750 | Msa1179020 | -0.803823 | 2.900036e-49 | -8.615850e-47 |
| Msa0669850 | Msa1179020 | -0.805534 | 1.274441e-49 | -8.615850e-47 |
| Msa0685380 | Msa1179020 | 0.832462 | 9.323799e-56 | -8.615850e-47 |
| Msa0790390 | Msa1179020 | 0.830550 | 2.757779e-55 | -8.615850e-47 |
| Msa0820530 | Msa1179020 | 0.811590 | 6.487222e-51 | -8.615850e-47 |
| Msa0145950 | Msa1179020 | -0.809175 | 2.154257e-50 | -8.615850e-47 |
| Msa0188680 | Msa1179020 | 0.817485 | 3.218854e-52 | -8.615850e-47 |
| Msa0223290 | Msa1179020 | -0.808155 | 3.559488e-50 | -8.615850e-47 |
| Msa0236980 | Msa1179020 | -0.802591 | 5.216888e-49 | -8.615850e-47 |
| Msa0426810 | Msa1179020 | -0.822859 | 1.890868e-53 | -8.615850e-47 |
| Msa0462540 | Msa1179020 | -0.804023 | 2.635347e-49 | -8.615850e-47 |
| Msa0469910 | Msa1179020 | 0.843553 | 1.305565e-58 | -8.615850e-47 |
| Msa0982590 | Msa1179020 | -0.805237 | 1.470838e-49 | -8.615850e-47 |
| Msa1069660 | Msa1179020 | 0.812040 | 5.178267e-51 | -8.615850e-47 |
| Msa0266210 | Msa1179020 | -0.825630 | 4.221227e-54 | -8.615850e-47 |
| Msa0270220 | Msa1179020 | 0.825225 | 5.265378e-54 | -8.615850e-47 |
| Msa0275400 | Msa1179020 | 0.808995 | 2.354352e-50 | -8.615850e-47 |
| Msa0287670 | Msa1179020 | -0.818973 | 1.481639e-52 | -8.615850e-47 |
| Msa0302650 | Msa1179020 | -0.843392 | 1.441819e-58 | -8.615850e-47 |
| Msa0307830 | Msa1179020 | 0.811872 | 5.632201e-51 | -8.615850e-47 |
| Msa0308220 | Msa1179020 | -0.800143 | 1.654839e-48 | -8.615850e-47 |
| Msa0328210 | Msa1179020 | -0.805774 | 1.134967e-49 | -8.615850e-47 |
| Msa1126120 | Msa1179020 | 0.809081 | 2.256310e-50 | -8.615850e-47 |
| Msa1130210 | Msa1179020 | 0.837887 | 3.987621e-57 | -8.615850e-47 |
| Msa1171770 | Msa1179020 | 0.808911 | 2.454316e-50 | -8.615850e-47 |
| Msa1179020 | Msa1246530 | 0.820595 | 6.311302e-53 | -8.615850e-47 |
| Msa1179020 | Msa1300860 | -0.816928 | 4.294347e-52 | -8.615850e-47 |
| Msa1179020 | Msa1310660 | -0.802967 | 4.362312e-49 | -8.615850e-47 |
| Msa1179020 | Msa1350690 | -0.817806 | 2.724441e-52 | -8.615850e-47 |
| Msa1179020 | Msa1403580 | 0.837210 | 5.944638e-57 | -8.615850e-47 |
| Msa1179020 | Msa1443290 | 0.814944 | 1.190064e-51 | -8.615850e-47 |
| Msa0493920 | Msa1179020 | -0.823773 | 1.156021e-53 | -8.615850e-47 |
| Msa0505060 | Msa1179020 | -0.802877 | 4.553653e-49 | -8.615850e-47 |
| Msa0565620 | Msa1179020 | 0.802974 | 4.347955e-49 | -8.615850e-47 |
| Msa0876860 | Msa1179020 | 0.813980 | 1.944488e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1179020 | MtrunA17_Chr8g0343261 | 81.034 | 116 | 19 | 1 | 161 | 273 | 1 | 116 | 9.45e-63 | 197 |
| Msa1179020 | MtrunA17_Chr8g0343261 | 44.231 | 104 | 34 | 3 | 1 | 80 | 47 | 150 | 4.75e-15 | 72.8 |
| Msa1179020 | MtrunA17_Chr8g0343361 | 80.172 | 116 | 20 | 1 | 161 | 273 | 1 | 116 | 1.26e-62 | 197 |
| Msa1179020 | MtrunA17_Chr8g0343361 | 40.952 | 105 | 36 | 3 | 1 | 80 | 47 | 150 | 1.61e-12 | 65.9 |
| Msa1179020 | MtrunA17_Chr8g0343311 | 64.957 | 117 | 30 | 3 | 161 | 273 | 1 | 110 | 1.41e-42 | 146 |
| Msa1179020 | MtrunA17_Chr8g0343311 | 40.404 | 99 | 38 | 3 | 1 | 80 | 48 | 144 | 5.72e-11 | 61.6 |
| Msa1179020 | MtrunA17_Chr7g0235131 | 51.479 | 169 | 63 | 6 | 1 | 157 | 18 | 179 | 1.66e-41 | 141 |
| Msa1179020 | MtrunA17_Chr8g0343211 | 82.857 | 70 | 9 | 1 | 207 | 273 | 1 | 70 | 2.63e-34 | 122 |
| Msa1179020 | MtrunA17_Chr8g0343211 | 45.192 | 104 | 33 | 3 | 1 | 80 | 1 | 104 | 5.83e-16 | 73.9 |
| Msa1179020 | MtrunA17_Chr8g0343191 | 82.857 | 70 | 9 | 1 | 207 | 273 | 1 | 70 | 1.30e-33 | 121 |
| Msa1179020 | MtrunA17_Chr8g0343191 | 44.231 | 104 | 34 | 3 | 1 | 80 | 1 | 104 | 5.55e-15 | 71.6 |
| Msa1179020 | MtrunA17_Chr8g0343301 | 62.821 | 78 | 26 | 1 | 161 | 235 | 1 | 78 | 1.99e-28 | 108 |
| Msa1179020 | MtrunA17_Chr8g0343221 | 53.488 | 86 | 37 | 1 | 161 | 243 | 1 | 86 | 2.22e-23 | 95.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 71 sgRNAs with CRISPR-Local
Find 495 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGGGTTTGCGTCGGTAC+TGG | 0.250499 | 8_1:+12020525 | None:intergenic |
| CCATTTGTCCTTGTCTTTGT+AGG | 0.268520 | 8_1:+12020666 | None:intergenic |
| TTCCTCAATGGTTGGGGTTT+CGG | 0.269135 | 8_1:+12020738 | None:intergenic |
| AACTTTCTCCAACCTTTCTT+TGG | 0.286813 | 8_1:+12020715 | None:intergenic |
| AAATGTCATAGTTGCAATTA+TGG | 0.290310 | 8_1:+12028729 | None:intergenic |
| TGTGTTTGGTATTGCTATTA+TGG | 0.307706 | 8_1:-12028363 | Msa1179020:CDS |
| AGAGAACTCCAAATGGAATT+TGG | 0.310603 | 8_1:+12028395 | None:intergenic |
| GGAGGATATGAGAGGGAACT+TGG | 0.312746 | 8_1:-12020641 | Msa1179020:CDS |
| TCTTTGGTTCCTCAATGGTT+GGG | 0.315126 | 8_1:+12020731 | None:intergenic |
| TCAACCGTGGATTTACAATA+TGG | 0.315236 | 8_1:-12028501 | Msa1179020:CDS |
| GGTTGGAGAAAGTTATTAGA+AGG | 0.324218 | 8_1:-12020706 | Msa1179020:CDS |
| TTCTTTGGTTCCTCAATGGT+TGG | 0.324418 | 8_1:+12020730 | None:intergenic |
| ACAAATTTCGTCATAATTGT+TGG | 0.339063 | 8_1:+12020477 | None:intergenic |
| TCTCTTCCTGGGAATGTGTT+TGG | 0.339111 | 8_1:-12028377 | Msa1179020:CDS |
| ACCTTTCTTTGGTTCCTCAA+TGG | 0.360975 | 8_1:+12020726 | None:intergenic |
| CGCAACAATGACATTTCAAA+TGG | 0.372425 | 8_1:-12020599 | Msa1179020:CDS |
| GCGTCGGTACTGGGTGGATT+TGG | 0.375106 | 8_1:+12020535 | None:intergenic |
| TCCATTTGGAGTTCTCTTCC+TGG | 0.394499 | 8_1:-12028389 | Msa1179020:CDS |
| GGTGGGTTTGCGTCGGTACT+GGG | 0.395702 | 8_1:+12020526 | None:intergenic |
| TCGTCATAATTGTTGGCAAC+TGG | 0.396653 | 8_1:+12020484 | None:intergenic |
| CTTTGGTTCCTCAATGGTTG+GGG | 0.402745 | 8_1:+12020732 | None:intergenic |
| TTATGACGAAATTTGTACTT+TGG | 0.412313 | 8_1:-12020470 | Msa1179020:CDS |
| AGAAAGTTATTAGAAGGGAT+AGG | 0.420509 | 8_1:-12020700 | Msa1179020:CDS |
| TATTAGAAGGGATAGGGAGT+TGG | 0.423076 | 8_1:-12020693 | Msa1179020:CDS |
| GAAAGTTATTAGAAGGGATA+GGG | 0.426567 | 8_1:-12020699 | Msa1179020:CDS |
| CCATTTGGAGTTCTCTTCCT+GGG | 0.433001 | 8_1:-12028388 | Msa1179020:CDS |
| CGGTCACACCAAATTCCATT+TGG | 0.441909 | 8_1:-12028403 | Msa1179020:CDS |
| CCTGGTTCGCTTATTTGTGA+GGG | 0.445666 | 8_1:-12028303 | Msa1179020:CDS |
| ATTGTAAATCCACGGTTGAT+AGG | 0.448795 | 8_1:+12028505 | None:intergenic |
| GGCGGATTTGCATTGGTACT+TGG | 0.452705 | 8_1:+12020505 | None:intergenic |
| GGCGTTATGTCGATTAAAGA+TGG | 0.471008 | 8_1:-12020559 | Msa1179020:CDS |
| TTTGTTGCGAATCAAACAAT+CGG | 0.472260 | 8_1:+12028657 | None:intergenic |
| TGTGAGTGTGATACACATTC+CGG | 0.474995 | 8_1:+12028468 | None:intergenic |
| GATTTGCATTGGTACTTGGT+GGG | 0.483155 | 8_1:+12020509 | None:intergenic |
| ATGTGTAGGAGAAGCTATCT+TGG | 0.484361 | 8_1:-12028626 | Msa1179020:CDS |
| GTTGGAGAAAGTTATTAGAA+GGG | 0.488203 | 8_1:-12020705 | Msa1179020:CDS |
| CCTACAAAGACAAGGACAAA+TGG | 0.497136 | 8_1:-12020666 | Msa1179020:CDS |
| GGATTTGCATTGGTACTTGG+TGG | 0.502384 | 8_1:+12020508 | None:intergenic |
| TCCTGGTTCGCTTATTTGTG+AGG | 0.506075 | 8_1:-12028304 | Msa1179020:CDS |
| CCCAGGAAGAGAACTCCAAA+TGG | 0.525070 | 8_1:+12028388 | None:intergenic |
| TTGAGGAACCAAAGAAAGGT+TGG | 0.527485 | 8_1:-12020723 | Msa1179020:CDS |
| CCCTCACAAATAAGCGAACC+AGG | 0.528019 | 8_1:+12028303 | None:intergenic |
| ACCATTGAGGAACCAAAGAA+AGG | 0.528211 | 8_1:-12020727 | Msa1179020:CDS |
| GGCAACTGGCGGATTTGCAT+TGG | 0.529223 | 8_1:+12020498 | None:intergenic |
| AACAATGAAGTGGAAAATCA+TGG | 0.532243 | 8_1:-12020769 | Msa1179020:CDS |
| GAGGATATGAGAGGGAACTT+GGG | 0.539144 | 8_1:-12020640 | Msa1179020:intron |
| GGTACTTGGTGGGTTTGCGT+CGG | 0.548143 | 8_1:+12020519 | None:intergenic |
| GCAATACCAAACACATTCCC+AGG | 0.558402 | 8_1:+12028371 | None:intergenic |
| CTAGCTTGCACAACACCACC+AGG | 0.560158 | 8_1:+12028694 | None:intergenic |
| TCATAATTGTTGGCAACTGG+CGG | 0.561689 | 8_1:+12020487 | None:intergenic |
| CTGGTTCGCTTATTTGTGAG+GGG | 0.563398 | 8_1:-12028302 | Msa1179020:intron |
| TTAATCGACATAACGCCACC+GGG | 0.566372 | 8_1:+12020565 | None:intergenic |
| GAATGGTTAAATTATATGAA+AGG | 0.568429 | 8_1:-12028772 | None:intergenic |
| TTACATGTTTGCTTCAAACA+TGG | 0.570834 | 8_1:-12028431 | Msa1179020:CDS |
| TACAACGAACCTCTATGTCC+AGG | 0.572052 | 8_1:-12020445 | None:intergenic |
| AAACATGTAAGTAAGAGATA+AGG | 0.575957 | 8_1:+12028444 | None:intergenic |
| TTTAATCGACATAACGCCAC+CGG | 0.583994 | 8_1:+12020564 | None:intergenic |
| ATAGCTTCACCTGGACATAG+AGG | 0.584451 | 8_1:+12020436 | None:intergenic |
| CAAAGACAAGGACAAATGGT+TGG | 0.585036 | 8_1:-12020662 | Msa1179020:CDS |
| AACCGAAACCCCAACCATTG+AGG | 0.590231 | 8_1:-12020740 | Msa1179020:CDS |
| AGACAAGGACAAATGGTTGG+AGG | 0.590581 | 8_1:-12020659 | Msa1179020:CDS |
| AGAGACAATGAACAATGAAG+TGG | 0.594163 | 8_1:-12020779 | Msa1179020:CDS |
| GCGTTATGTCGATTAAAGAT+GGG | 0.595589 | 8_1:-12020558 | Msa1179020:CDS |
| GGGTTTGCGTCGGTACTGGG+TGG | 0.621443 | 8_1:+12020529 | None:intergenic |
| AAAGCCATATTGTAAATCCA+CGG | 0.628630 | 8_1:+12028497 | None:intergenic |
| AAATGGTTGGAGGATATGAG+AGG | 0.629908 | 8_1:-12020649 | Msa1179020:CDS |
| AATGGTTGGAGGATATGAGA+GGG | 0.643421 | 8_1:-12020648 | Msa1179020:CDS |
| AGTGGAATTCCTATCAACCG+TGG | 0.654528 | 8_1:-12028514 | Msa1179020:CDS |
| TTGCTTCAAACATGGTCACA+CGG | 0.659886 | 8_1:-12028423 | Msa1179020:CDS |
| GCTTGCACAACACCACCAGG+TGG | 0.706334 | 8_1:+12028697 | None:intergenic |
| TTGGTTGTCCTACAAAGACA+AGG | 0.706864 | 8_1:-12020674 | Msa1179020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTAAAAAAAAAATATTAT+GGG | + | chr8_1:12023404-12023423 | None:intergenic | 0.0% |
| !! | ATATTAAAAAAAAAATATTA+TGG | + | chr8_1:12023405-12023424 | None:intergenic | 0.0% |
| !! | TATATAATATATATATATAT+AGG | - | chr8_1:12027029-12027048 | Msa1179020:intron | 0.0% |
| !! | AAGTATATATCAATTAAAAA+AGG | - | chr8_1:12021395-12021414 | Msa1179020:intron | 10.0% |
| !! | ATTTATTAAATATTGTATGT+GGG | + | chr8_1:12022681-12022700 | None:intergenic | 10.0% |
| !! | TATTTATTAAATATTGTATG+TGG | + | chr8_1:12022682-12022701 | None:intergenic | 10.0% |
| !!! | AATATTTTGAAAATATTTGT+CGG | - | chr8_1:12025035-12025054 | Msa1179020:intron | 10.0% |
| !! | TATACATTAGTTAAAAAATA+TGG | - | chr8_1:12025097-12025116 | Msa1179020:intron | 10.0% |
| !!! | TAAAAGATTTGTATTTTTTT+TGG | + | chr8_1:12026187-12026206 | None:intergenic | 10.0% |
| !! | AACAAAAAATTAATATGTGT+AGG | - | chr8_1:12020564-12020583 | Msa1179020:CDS | 15.0% |
| !! | TGTAACTATTATAAATTGTA+AGG | - | chr8_1:12021154-12021173 | Msa1179020:intron | 15.0% |
| !! | GTAACTATTATAAATTGTAA+GGG | - | chr8_1:12021155-12021174 | Msa1179020:intron | 15.0% |
| !!! | ATAGATCCTTATTTATATAT+AGG | - | chr8_1:12021485-12021504 | Msa1179020:intron | 15.0% |
| !!! | TAGATCCTTATTTATATATA+GGG | - | chr8_1:12021486-12021505 | Msa1179020:intron | 15.0% |
| !! | ATTAACCCTATATATAAATA+AGG | + | chr8_1:12021494-12021513 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr8_1:12021974-12021993 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr8_1:12021973-12021992 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | + | chr8_1:12021752-12021771 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | - | chr8_1:12021883-12021902 | Msa1179020:intron | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr8_1:12021973-12021992 | Msa1179020:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr8_1:12021974-12021993 | Msa1179020:intron | 15.0% |
| !!! | TGAATTTCATTTTAAAATTC+TGG | + | chr8_1:12022090-12022109 | None:intergenic | 15.0% |
| !! | TCAAATAAAAAAAAAAGAGA+AGG | - | chr8_1:12022113-12022132 | Msa1179020:intron | 15.0% |
| !!! | TTAATTTTTCACACAAAAAA+AGG | - | chr8_1:12022270-12022289 | Msa1179020:intron | 15.0% |
| !!! | TAATTTTTCACACAAAAAAA+GGG | - | chr8_1:12022271-12022290 | Msa1179020:intron | 15.0% |
| !! | TTTATTAAATATTGTATGTG+GGG | + | chr8_1:12022680-12022699 | None:intergenic | 15.0% |
| !!! | ATGTGTAATTATAGTATTTT+TGG | + | chr8_1:12023147-12023166 | None:intergenic | 15.0% |
| !!! | TTTTAGTGTTTGTTTTATAA+TGG | - | chr8_1:12023838-12023857 | Msa1179020:intron | 15.0% |
| !! | ATTTAGTAAAACAAAAAAGT+TGG | + | chr8_1:12023983-12024002 | None:intergenic | 15.0% |
| !! | AATTTGTATGTATTAAAGTT+CGG | - | chr8_1:12024292-12024311 | Msa1179020:intron | 15.0% |
| !! | TACTTCAAAATAGTTTAAAA+AGG | - | chr8_1:12024546-12024565 | Msa1179020:intron | 15.0% |
| !!! | ATATTTTGAAAATATTTGTC+GGG | - | chr8_1:12025036-12025055 | Msa1179020:intron | 15.0% |
| !! | TCAAAAATACCAAAATTATT+AGG | + | chr8_1:12025468-12025487 | None:intergenic | 15.0% |
| !!! | TATTTTTGAAACTTAAAACA+TGG | - | chr8_1:12025479-12025498 | Msa1179020:intron | 15.0% |
| !!! | CCAATTATTAATTTGATATA+GGG | + | chr8_1:12026144-12026163 | None:intergenic | 15.0% |
| !!! | TCCAATTATTAATTTGATAT+AGG | + | chr8_1:12026145-12026164 | None:intergenic | 15.0% |
| !! | TGACTAAAAAAATTATTGAT+GGG | + | chr8_1:12026590-12026609 | None:intergenic | 15.0% |
| !! | ATGACTAAAAAAATTATTGA+TGG | + | chr8_1:12026591-12026610 | None:intergenic | 15.0% |
| !!! | TTTTATTTTGAAATTGCATA+TGG | + | chr8_1:12026687-12026706 | None:intergenic | 15.0% |
| !! | ATAATTTCACTAAAATAAGT+TGG | + | chr8_1:12027363-12027382 | None:intergenic | 15.0% |
| !! | ATAAATAAATTTGAGTAGAA+GGG | + | chr8_1:12028030-12028049 | None:intergenic | 15.0% |
| !! | GAATGCAAAAAAAAAAAAAA+TGG | + | chr8_1:12028257-12028276 | None:intergenic | 15.0% |
| !!! | ATTTTGCTATTTTTTTCAGT+TGG | + | chr8_1:12021195-12021214 | None:intergenic | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | + | chr8_1:12021622-12021641 | None:intergenic | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | + | chr8_1:12021623-12021642 | None:intergenic | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | + | chr8_1:12021717-12021736 | None:intergenic | 20.0% |
| !!! | GGTTTTCATCATATATATAA+GGG | + | chr8_1:12022048-12022067 | None:intergenic | 20.0% |
| !! | AAAAAAAAATTATGAGCAAG+AGG | - | chr8_1:12022308-12022327 | Msa1179020:intron | 20.0% |
| !! | TTGAATACAATTTCTCTATT+TGG | + | chr8_1:12022585-12022604 | None:intergenic | 20.0% |
| !!! | CCAATTTTAATCCTATAATT+GGG | + | chr8_1:12023864-12023883 | None:intergenic | 20.0% |
| !! | ATTTGTATGTATTAAAGTTC+GGG | - | chr8_1:12024293-12024312 | Msa1179020:intron | 20.0% |
| !! | TTTAAAAAGGAACAAATTGA+AGG | - | chr8_1:12024559-12024578 | Msa1179020:intron | 20.0% |
| !! | TTAAAAAGGAACAAATTGAA+GGG | - | chr8_1:12024560-12024579 | Msa1179020:intron | 20.0% |
| !! | TAAAATCAATTTGAGTAGAA+GGG | + | chr8_1:12024855-12024874 | None:intergenic | 20.0% |
| !! | ATAAAATCAATTTGAGTAGA+AGG | + | chr8_1:12024856-12024875 | None:intergenic | 20.0% |
| !!! | ATTTTATCTTTCTGCTTATT+AGG | - | chr8_1:12024869-12024888 | Msa1179020:intron | 20.0% |
| !!! | TTTTATCTTTCTGCTTATTA+GGG | - | chr8_1:12024870-12024889 | Msa1179020:intron | 20.0% |
| !!! | ATTGGACATGTATTTTATAA+CGG | - | chr8_1:12025156-12025175 | Msa1179020:intron | 20.0% |
| !! | CCATTAGTCAAATAAATAAT+GGG | + | chr8_1:12025355-12025374 | None:intergenic | 20.0% |
| !! | ACCATTAGTCAAATAAATAA+TGG | + | chr8_1:12025356-12025375 | None:intergenic | 20.0% |
| !! | AAATACCAAAATTATTAGGT+CGG | + | chr8_1:12025464-12025483 | None:intergenic | 20.0% |
| !!! | ATTGAGTTTCTTTTCTATAA+TGG | + | chr8_1:12025749-12025768 | None:intergenic | 20.0% |
| !!! | AAAAACACTTAACTACTTTT+TGG | - | chr8_1:12025803-12025822 | Msa1179020:intron | 20.0% |
| !! | GAAAAAAAAATGAGTTGTTA+AGG | + | chr8_1:12025855-12025874 | None:intergenic | 20.0% |
| !!! | TCTATCTTTTGTCATATTAA+AGG | - | chr8_1:12026029-12026048 | Msa1179020:intron | 20.0% |
| !! | TAATTTGATATAGGGTAATT+AGG | + | chr8_1:12026136-12026155 | None:intergenic | 20.0% |
| !! | CCCTATATCAAATTAATAAT+TGG | - | chr8_1:12026141-12026160 | Msa1179020:intron | 20.0% |
| !! | AAACATGATTATAAATGGTT+AGG | + | chr8_1:12026565-12026584 | None:intergenic | 20.0% |
| !! | TAGTATCATTTGCAAATATT+TGG | + | chr8_1:12026728-12026747 | None:intergenic | 20.0% |
| !!! | GTTATTTTTTTTTCAATCGT+GGG | + | chr8_1:12026885-12026904 | None:intergenic | 20.0% |
| !!! | TGTTATTTTTTTTTCAATCG+TGG | + | chr8_1:12026886-12026905 | None:intergenic | 20.0% |
| !! | GATAAATAGACATTTACTTA+TGG | - | chr8_1:12027169-12027188 | Msa1179020:intron | 20.0% |
| !! | AAAAAAAAAACTTGTACCTA+CGG | + | chr8_1:12027274-12027293 | None:intergenic | 20.0% |
| !! | GATAAATAAATTTGAGTAGA+AGG | + | chr8_1:12028031-12028050 | None:intergenic | 20.0% |
| !! | GAAAATAAATTTGAGTAGAA+GGG | + | chr8_1:12028107-12028126 | None:intergenic | 20.0% |
| !! | AGAAAATAAATTTGAGTAGA+AGG | + | chr8_1:12028108-12028127 | None:intergenic | 20.0% |
| !!! | TACTCAAATTTATTTTCTCT+TGG | - | chr8_1:12028110-12028129 | Msa1179020:intron | 20.0% |
| !!! | TTTTTTGCATTCAAAGTAAT+AGG | - | chr8_1:12028265-12028284 | Msa1179020:intron | 20.0% |
| !! | CAATGATCTTTAATATTTCA+TGG | - | chr8_1:12028390-12028409 | Msa1179020:CDS | 20.0% |
| ! | AAATGTCATAGTTGCAATTA+TGG | + | chr8_1:12020478-12020497 | None:intergenic | 25.0% |
| ! | AAACATGTAAGTAAGAGATA+AGG | + | chr8_1:12020763-12020782 | None:intergenic | 25.0% |
| !!! | AATTGTTTTTACTTTTCTCC+TGG | - | chr8_1:12020883-12020902 | Msa1179020:intron | 25.0% |
| ! | AGTTTGAGGAAAAAAAATTG+TGG | + | chr8_1:12021298-12021317 | None:intergenic | 25.0% |
| !!! | TCAAAAAAACTTTAGCCTTA+AGG | + | chr8_1:12021331-12021350 | None:intergenic | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | + | chr8_1:12021589-12021608 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | - | chr8_1:12021911-12021930 | Msa1179020:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | - | chr8_1:12021912-12021931 | Msa1179020:intron | 25.0% |
| !! | GGGTTTTCATCATATATATA+AGG | + | chr8_1:12022049-12022068 | None:intergenic | 25.0% |
| ! | AAAAGAGAAGGAAATTTGAA+TGG | - | chr8_1:12022125-12022144 | Msa1179020:intron | 25.0% |
| !!! | CAAGGTCGTTTTATATTTTT+AGG | + | chr8_1:12022156-12022175 | None:intergenic | 25.0% |
| ! | TAAATAGAGTAATACGTAGA+CGG | - | chr8_1:12022522-12022541 | Msa1179020:intron | 25.0% |
| !!! | ATGTTGATTTATGACTGTTT+TGG | + | chr8_1:12022752-12022771 | None:intergenic | 25.0% |
| ! | ACATCTCATAAAAAACTCAA+AGG | - | chr8_1:12022859-12022878 | Msa1179020:intron | 25.0% |
| ! | TCCAAAATAAATGCATAGAA+AGG | - | chr8_1:12022952-12022971 | Msa1179020:intron | 25.0% |
| !! | TCCTTTCTATGCATTTATTT+TGG | + | chr8_1:12022956-12022975 | None:intergenic | 25.0% |
| !!! | TTTTATTTTGAATCTCCTGT+TGG | - | chr8_1:12023565-12023584 | Msa1179020:intron | 25.0% |
| !!! | TTTTATTTTGAATCTCCTGT+TGG | - | chr8_1:12023565-12023584 | Msa1179020:intron | 25.0% |
| !! | TTTTATAATGGCCCAATTAT+AGG | - | chr8_1:12023850-12023869 | Msa1179020:intron | 25.0% |
| ! | CCCAATTATAGGATTAAAAT+TGG | - | chr8_1:12023861-12023880 | Msa1179020:intron | 25.0% |
| !!! | GCCAATTTTAATCCTATAAT+TGG | + | chr8_1:12023865-12023884 | None:intergenic | 25.0% |
| !!! | TAAAACAAAAAAGTTGGTGT+GGG | + | chr8_1:12023977-12023996 | None:intergenic | 25.0% |
| ! | CACAAAGTTACAAACATATT+GGG | + | chr8_1:12024221-12024240 | None:intergenic | 25.0% |
| ! | TCACAAAGTTACAAACATAT+TGG | + | chr8_1:12024222-12024241 | None:intergenic | 25.0% |
| ! | TTACCAGTTGAAAATGATAA+AGG | - | chr8_1:12024242-12024261 | Msa1179020:intron | 25.0% |
| !! | ATTCCTTTATCATTTTCAAC+TGG | + | chr8_1:12024248-12024267 | None:intergenic | 25.0% |
| ! | TGCCACTAAAAAAAAAAGTT+CGG | - | chr8_1:12024316-12024335 | Msa1179020:intron | 25.0% |
| !!! | TAATGATGGACCAAATTAAT+GGG | + | chr8_1:12024500-12024519 | None:intergenic | 25.0% |
| !!! | TTAATGATGGACCAAATTAA+TGG | + | chr8_1:12024501-12024520 | None:intergenic | 25.0% |
| ! | AGAAAAAGAAACAAAGCAAT+AGG | - | chr8_1:12024894-12024913 | Msa1179020:intron | 25.0% |
| ! | ATAGTGCAAATTGCAAAAAT+TGG | - | chr8_1:12025138-12025157 | Msa1179020:intron | 25.0% |
| ! | AAGTTGAAAAGATTCAATCA+TGG | + | chr8_1:12025283-12025302 | None:intergenic | 25.0% |
| !!! | GTCAAATAAATAATGGGTAA+GGG | + | chr8_1:12025349-12025368 | None:intergenic | 25.0% |
| !!! | AGTCAAATAAATAATGGGTA+AGG | + | chr8_1:12025350-12025369 | None:intergenic | 25.0% |
| ! | CCCATTATTTATTTGACTAA+TGG | - | chr8_1:12025352-12025371 | Msa1179020:intron | 25.0% |
| !!! | TTTTGAAACTTAAAACATGG+TGG | - | chr8_1:12025482-12025501 | Msa1179020:intron | 25.0% |
| ! | ATGTTCGAACTTATTAGTTA+TGG | + | chr8_1:12025544-12025563 | None:intergenic | 25.0% |
| !!! | ATCTGCTATTTTATCCATTT+GGG | + | chr8_1:12025642-12025661 | None:intergenic | 25.0% |
| !!! | TATCTGCTATTTTATCCATT+TGG | + | chr8_1:12025643-12025662 | None:intergenic | 25.0% |
| ! | AGAAATAGAGAGAAAGTAAA+AGG | - | chr8_1:12026336-12026355 | Msa1179020:intron | 25.0% |
| ! | TTGCATATGGAATTATTGAT+GGG | + | chr8_1:12026674-12026693 | None:intergenic | 25.0% |
| ! | ATTGCATATGGAATTATTGA+TGG | + | chr8_1:12026675-12026694 | None:intergenic | 25.0% |
| ! | AACATGTTTATCAATCTAAG+TGG | + | chr8_1:12027107-12027126 | None:intergenic | 25.0% |
| ! | GTAAATGTCTATTTATCTGT+AGG | + | chr8_1:12027166-12027185 | None:intergenic | 25.0% |
| !! | TGATTTTTGTGAATTCAACT+TGG | - | chr8_1:12027905-12027924 | Msa1179020:intron | 25.0% |
| ! | AGAAAAAGAAAGAAAGCAAT+AGG | - | chr8_1:12028068-12028087 | Msa1179020:intron | 25.0% |
| !!! | ATATTTCATGGTTGTTTTGA+AGG | - | chr8_1:12028402-12028421 | Msa1179020:CDS | 25.0% |
| ! | ACAAATTTCGTCATAATTGT+TGG | + | chr8_1:12028730-12028749 | None:intergenic | 25.0% |
| ! | TTATGACGAAATTTGTACTT+TGG | - | chr8_1:12028734-12028753 | Msa1179020:CDS | 25.0% |
| TTTGTTGCGAATCAAACAAT+CGG | + | chr8_1:12020550-12020569 | None:intergenic | 30.0% | |
| AAAGCCATATTGTAAATCCA+CGG | + | chr8_1:12020710-12020729 | None:intergenic | 30.0% | |
| ! | ACAATATGGCTTTTATCAAC+CGG | - | chr8_1:12020717-12020736 | Msa1179020:CDS | 30.0% |
| TTACATGTTTGCTTCAAACA+TGG | - | chr8_1:12020773-12020792 | Msa1179020:CDS | 30.0% | |
| ! | TGTGTTTGGTATTGCTATTA+TGG | - | chr8_1:12020841-12020860 | Msa1179020:intron | 30.0% |
| TCATCATTTGTAGCATCTAT+TGG | + | chr8_1:12020930-12020949 | None:intergenic | 30.0% | |
| ! | TTAGTACCTTTGTTTGTGTT+TGG | - | chr8_1:12021064-12021083 | Msa1179020:intron | 30.0% |
| AAAACTAGAGTTGAATCTAG+TGG | - | chr8_1:12021110-12021129 | Msa1179020:intron | 30.0% | |
| AAACTCATCAATGAACCTTA+AGG | - | chr8_1:12021313-12021332 | Msa1179020:intron | 30.0% | |
| GATATATACTTACATTGCAG+TGG | + | chr8_1:12021386-12021405 | None:intergenic | 30.0% | |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr8_1:12022005-12022024 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr8_1:12022004-12022023 | None:intergenic | 30.0% |
| CAGTGCAGAAAAACAAAATT+AGG | + | chr8_1:12021590-12021609 | None:intergenic | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | + | chr8_1:12021849-12021868 | None:intergenic | 30.0% | |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr8_1:12022004-12022023 | Msa1179020:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr8_1:12022005-12022024 | Msa1179020:intron | 30.0% |
| ATAAAACGACCTTGAATTGA+TGG | - | chr8_1:12022162-12022181 | Msa1179020:intron | 30.0% | |
| ! | CTTGCTATCAACAATATACT+GGG | - | chr8_1:12022237-12022256 | Msa1179020:intron | 30.0% |
| ! | TTTTCACACAAAAAAAGGGA+CGG | - | chr8_1:12022275-12022294 | Msa1179020:intron | 30.0% |
| ATGCAATAACCATTGGATTT+AGG | - | chr8_1:12022468-12022487 | Msa1179020:intron | 30.0% | |
| ATGTTCAAGGAGTTACAAAT+AGG | - | chr8_1:12022622-12022641 | Msa1179020:intron | 30.0% | |
| TGTTCAAGGAGTTACAAATA+GGG | - | chr8_1:12022623-12022642 | Msa1179020:intron | 30.0% | |
| ATAATCATAAAAAGTCGCAG+CGG | - | chr8_1:12022770-12022789 | Msa1179020:intron | 30.0% | |
| ATGAGATGTATCTGAGAATT+TGG | + | chr8_1:12022848-12022867 | None:intergenic | 30.0% | |
| AATGCATAGAAAGGATGAAT+AGG | - | chr8_1:12022961-12022980 | Msa1179020:intron | 30.0% | |
| CACATCATAAATCTACTAGA+GGG | - | chr8_1:12023032-12023051 | Msa1179020:intron | 30.0% | |
| ! | GAACTCAAGCATATCATTTT+AGG | - | chr8_1:12023085-12023104 | Msa1179020:intron | 30.0% |
| TGAATGATGTATATTCGACT+TGG | + | chr8_1:12023237-12023256 | None:intergenic | 30.0% | |
| ! | TTGTGTAATTGTGATGATGA+TGG | + | chr8_1:12023270-12023289 | None:intergenic | 30.0% |
| !! | AATAATTTCTAGTAGCCTAG+CGG | - | chr8_1:12023473-12023492 | Msa1179020:intron | 30.0% |
| !!! | TCATTTTAAAACACACCAAC+AGG | + | chr8_1:12023583-12023602 | None:intergenic | 30.0% |
| !!! | TCATTTTAAAACACACCAAC+AGG | + | chr8_1:12023583-12023602 | None:intergenic | 30.0% |
| !! | GTAAAACAAAAAAGTTGGTG+TGG | + | chr8_1:12023978-12023997 | None:intergenic | 30.0% |
| ACAGAGTCAATTTCAGAATT+TGG | - | chr8_1:12024088-12024107 | Msa1179020:intron | 30.0% | |
| TTAAGAGAAAATGTTGATCG+AGG | + | chr8_1:12024134-12024153 | None:intergenic | 30.0% | |
| GCCACTAAAAAAAAAAGTTC+GGG | - | chr8_1:12024317-12024336 | Msa1179020:intron | 30.0% | |
| !!! | ACCCGAACTTTTTTTTTTAG+TGG | + | chr8_1:12024321-12024340 | None:intergenic | 30.0% |
| ATTCACTAGACCCATTAATT+TGG | - | chr8_1:12024487-12024506 | Msa1179020:intron | 30.0% | |
| ATGAAAATGCAAAAAGGACA+AGG | + | chr8_1:12024633-12024652 | None:intergenic | 30.0% | |
| CTTTGCATGAAAATGCAAAA+AGG | + | chr8_1:12024639-12024658 | None:intergenic | 30.0% | |
| CTCTCCTTTCCTTATATAAA+GGG | - | chr8_1:12024731-12024750 | Msa1179020:intron | 30.0% | |
| TCTCCTTTCCTTATATAAAG+GGG | - | chr8_1:12024732-12024751 | Msa1179020:intron | 30.0% | |
| !! | GACATGTATTTTATAACGGA+GGG | - | chr8_1:12025160-12025179 | Msa1179020:intron | 30.0% |
| !! | GCACTAATGTGTTATTTCTA+AGG | + | chr8_1:12025255-12025274 | None:intergenic | 30.0% |
| ! | ATCTTTTCAACTTTGTCCTT+TGG | - | chr8_1:12025290-12025309 | Msa1179020:intron | 30.0% |
| AAACTCATACACAAAAGTGA+AGG | - | chr8_1:12025409-12025428 | Msa1179020:intron | 30.0% | |
| AACTCATACACAAAAGTGAA+GGG | - | chr8_1:12025410-12025429 | Msa1179020:intron | 30.0% | |
| ATGGAAACGAGTGTTTAATT+TGG | + | chr8_1:12025525-12025544 | None:intergenic | 30.0% | |
| TACCTATGAATCTATGATGA+AGG | + | chr8_1:12025610-12025629 | None:intergenic | 30.0% | |
| !!! | TCTGCTATTTTATCCATTTG+GGG | + | chr8_1:12025641-12025660 | None:intergenic | 30.0% |
| ATGGATAAAATAGCAGATAG+TGG | - | chr8_1:12025644-12025663 | Msa1179020:intron | 30.0% | |
| TGGATAAAATAGCAGATAGT+GGG | - | chr8_1:12025645-12025664 | Msa1179020:intron | 30.0% | |
| !!! | ACACTTAACTACTTTTTGGT+CGG | - | chr8_1:12025807-12025826 | Msa1179020:intron | 30.0% |
| TAAGAAAGAATATTGAGGAG+AGG | + | chr8_1:12026111-12026130 | None:intergenic | 30.0% | |
| AGGCTTAAGAAAGAATATTG+AGG | + | chr8_1:12026116-12026135 | None:intergenic | 30.0% | |
| !! | GTAGACATTTCTAGTGTATT+TGG | - | chr8_1:12026211-12026230 | Msa1179020:intron | 30.0% |
| GTATAATTTAGCTGTCCAAA+AGG | + | chr8_1:12026285-12026304 | None:intergenic | 30.0% | |
| TTTCAAATACTATGTGTGTG+TGG | + | chr8_1:12026449-12026468 | None:intergenic | 30.0% | |
| ATGAAAATCTTAACTGAGTG+AGG | - | chr8_1:12026472-12026491 | Msa1179020:intron | 30.0% | |
| ! | GTTGATGTTTTCTTCTTCTA+TGG | + | chr8_1:12026541-12026560 | None:intergenic | 30.0% |
| GGGCTAAACATGATTATAAA+TGG | + | chr8_1:12026570-12026589 | None:intergenic | 30.0% | |
| AAAAAATAACAACTTCGACC+TGG | - | chr8_1:12026895-12026914 | Msa1179020:intron | 30.0% | |
| TTTATCAATCTAAGTGGTGT+TGG | + | chr8_1:12027101-12027120 | None:intergenic | 30.0% | |
| ATTAAATGTCCTTTCTTCGT+AGG | + | chr8_1:12027239-12027258 | None:intergenic | 30.0% | |
| GAAGAAAGGACATTTAATGA+CGG | - | chr8_1:12027241-12027260 | Msa1179020:intron | 30.0% | |
| GGTCTCAAAATTTGAAGAAA+AGG | + | chr8_1:12027303-12027322 | None:intergenic | 30.0% | |
| !! | TAAAATAAGTTGGTGCATCA+AGG | + | chr8_1:12027353-12027372 | None:intergenic | 30.0% |
| TTGCTAGATTGAAATAGTGA+TGG | + | chr8_1:12027408-12027427 | None:intergenic | 30.0% | |
| TATGAAATGACCGTAGTAAT+GGG | + | chr8_1:12027435-12027454 | None:intergenic | 30.0% | |
| TTATGAAATGACCGTAGTAA+TGG | + | chr8_1:12027436-12027455 | None:intergenic | 30.0% | |
| TCTTATCACACTAAGCAAAA+AGG | - | chr8_1:12027479-12027498 | Msa1179020:intron | 30.0% | |
| CTTATCACACTAAGCAAAAA+GGG | - | chr8_1:12027480-12027499 | Msa1179020:intron | 30.0% | |
| AATTCACAAAAATCACGTAG+TGG | + | chr8_1:12027900-12027919 | None:intergenic | 30.0% | |
| TACAACAACAATTTGACCTA+TGG | + | chr8_1:12028299-12028318 | None:intergenic | 30.0% | |
| AACAATGAAGTGGAAAATCA+TGG | - | chr8_1:12028435-12028454 | Msa1179020:CDS | 30.0% | |
| GTTGGAGAAAGTTATTAGAA+GGG | - | chr8_1:12028499-12028518 | Msa1179020:CDS | 30.0% | |
| AGAAAGTTATTAGAAGGGAT+AGG | - | chr8_1:12028504-12028523 | Msa1179020:CDS | 30.0% | |
| GAAAGTTATTAGAAGGGATA+GGG | - | chr8_1:12028505-12028524 | Msa1179020:CDS | 30.0% | |
| ! | ACATTTTCACTTAATCCACC+TGG | - | chr8_1:12020492-12020511 | Msa1179020:CDS | 35.0% |
| ! | GTTATTCTCTTGCTTGTTAG+TGG | - | chr8_1:12020672-12020691 | Msa1179020:CDS | 35.0% |
| ATTGTAAATCCACGGTTGAT+AGG | + | chr8_1:12020702-12020721 | None:intergenic | 35.0% | |
| TCAACCGTGGATTTACAATA+TGG | - | chr8_1:12020703-12020722 | Msa1179020:CDS | 35.0% | |
| AGAGAACTCCAAATGGAATT+TGG | + | chr8_1:12020812-12020831 | None:intergenic | 35.0% | |
| TTACCATCAATTGTGTCTTG+TGG | - | chr8_1:12020968-12020987 | Msa1179020:intron | 35.0% | |
| AAACCACAAGACACAATTGA+TGG | + | chr8_1:12020974-12020993 | None:intergenic | 35.0% | |
| ! | GGTGGTTCGTTTGAAATAAA+TGG | - | chr8_1:12021085-12021104 | Msa1179020:intron | 35.0% |
| AAGGTTCATTGATGAGTTTG+AGG | + | chr8_1:12021312-12021331 | None:intergenic | 35.0% | |
| AGGAGAAATGAGAAAAAGAG+AGG | - | chr8_1:12021415-12021434 | Msa1179020:intron | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | + | chr8_1:12021989-12022008 | None:intergenic | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | - | chr8_1:12021989-12022008 | Msa1179020:intron | 35.0% | |
| ATGAAAACCCTATAGAAGAG+AGG | - | chr8_1:12022059-12022078 | Msa1179020:intron | 35.0% | |
| !! | TAAGTGCTGGTTGGAAATAT+AGG | - | chr8_1:12022208-12022227 | Msa1179020:intron | 35.0% |
| !! | CCAGTATATTGTTGATAGCA+AGG | + | chr8_1:12022239-12022258 | None:intergenic | 35.0% |
| ! | CCTTGCTATCAACAATATAC+TGG | - | chr8_1:12022236-12022255 | Msa1179020:intron | 35.0% |
| TTTCACACAAAAAAAGGGAC+GGG | - | chr8_1:12022276-12022295 | Msa1179020:intron | 35.0% | |
| AAAAATTATGAGCAAGAGGC+TGG | - | chr8_1:12022312-12022331 | Msa1179020:intron | 35.0% | |
| TCCTTGCTCAAATGTATCAT+GGG | + | chr8_1:12022383-12022402 | None:intergenic | 35.0% | |
| TTCCTTGCTCAAATGTATCA+TGG | + | chr8_1:12022384-12022403 | None:intergenic | 35.0% | |
| TGAGCAAGGAAAAAGCTTAA+TGG | - | chr8_1:12022393-12022412 | Msa1179020:intron | 35.0% | |
| GAAAAAGCTTAATGGTACGA+TGG | - | chr8_1:12022401-12022420 | Msa1179020:intron | 35.0% | |
| ATATGATCCTATAGTTGCAG+TGG | + | chr8_1:12022450-12022469 | None:intergenic | 35.0% | |
| GGATCATATGCAATAACCAT+TGG | - | chr8_1:12022461-12022480 | Msa1179020:intron | 35.0% | |
| AAAACACAGCCTAAATCCAA+TGG | + | chr8_1:12022480-12022499 | None:intergenic | 35.0% | |
| ACCAACTGAATACATGTTCA+AGG | - | chr8_1:12022609-12022628 | Msa1179020:intron | 35.0% | |
| TCCTTGAACATGTATTCAGT+TGG | + | chr8_1:12022613-12022632 | None:intergenic | 35.0% | |
| ATATTGTATGTGGGGTTTGA+GGG | + | chr8_1:12022672-12022691 | None:intergenic | 35.0% | |
| AATATTGTATGTGGGGTTTG+AGG | + | chr8_1:12022673-12022692 | None:intergenic | 35.0% | |
| CATATATTCACCGAAGTTCA+AGG | - | chr8_1:12022708-12022727 | Msa1179020:intron | 35.0% | |
| !!! | TGACTGTTTTGGATTAGTGA+TGG | + | chr8_1:12022741-12022760 | None:intergenic | 35.0% |
| ACGAGATGTATCTGAGAATT+TGG | + | chr8_1:12022823-12022842 | None:intergenic | 35.0% | |
| CTAGTAGATTTATGATGTGC+AGG | + | chr8_1:12023031-12023050 | None:intergenic | 35.0% | |
| GCACATCATAAATCTACTAG+AGG | - | chr8_1:12023031-12023050 | Msa1179020:intron | 35.0% | |
| TATTATGGGCCCCAAAAATT+GGG | + | chr8_1:12023390-12023409 | None:intergenic | 35.0% | |
| ATATTATGGGCCCCAAAAAT+TGG | + | chr8_1:12023391-12023410 | None:intergenic | 35.0% | |
| AGATTCAAACTTGCAACCAA+AGG | + | chr8_1:12023519-12023538 | None:intergenic | 35.0% | |
| TTGCAAGTTTGAATCTCTGT+TGG | - | chr8_1:12023523-12023542 | Msa1179020:intron | 35.0% | |
| TGGAGAGGATATTCTACATA+GGG | + | chr8_1:12024059-12024078 | None:intergenic | 35.0% | |
| ATGGAGAGGATATTCTACAT+AGG | + | chr8_1:12024060-12024079 | None:intergenic | 35.0% | |
| ! | ATTGACTCTGTAGATTGAGA+TGG | + | chr8_1:12024079-12024098 | None:intergenic | 35.0% |
| TGAGTTTGCATTGGAATCAA+TGG | + | chr8_1:12024345-12024364 | None:intergenic | 35.0% | |
| TATTCTTGCTGAGTTTGCAT+TGG | + | chr8_1:12024354-12024373 | None:intergenic | 35.0% | |
| CAAACTCAGCAAGAATAAAG+TGG | - | chr8_1:12024357-12024376 | Msa1179020:intron | 35.0% | |
| GTTCTGTTGCATACTCTTAA+AGG | + | chr8_1:12024598-12024617 | None:intergenic | 35.0% | |
| TCATGCAAAGATTTCATGCA+TGG | - | chr8_1:12024649-12024668 | Msa1179020:intron | 35.0% | |
| CATGCAAAGATTTCATGCAT+GGG | - | chr8_1:12024650-12024669 | Msa1179020:intron | 35.0% | |
| !!! | CTTACTGCTATGGTTTTAAG+TGG | + | chr8_1:12024693-12024712 | None:intergenic | 35.0% |
| CACTTAAAACCATAGCAGTA+AGG | - | chr8_1:12024691-12024710 | Msa1179020:intron | 35.0% | |
| GATTCATTACCTTACTGCTA+TGG | + | chr8_1:12024703-12024722 | None:intergenic | 35.0% | |
| GCTCTCCTTTCCTTATATAA+AGG | - | chr8_1:12024730-12024749 | Msa1179020:intron | 35.0% | |
| !! | GTTTTGAGCCCCTTTATATA+AGG | + | chr8_1:12024743-12024762 | None:intergenic | 35.0% |
| AGAAACAAAGCAATAGGTGT+TGG | - | chr8_1:12024900-12024919 | Msa1179020:intron | 35.0% | |
| CACGACTGTGTTAAATTAAG+TGG | - | chr8_1:12024968-12024987 | Msa1179020:intron | 35.0% | |
| ACAAAGTGAAATGCTTTCTC+GGG | + | chr8_1:12025011-12025030 | None:intergenic | 35.0% | |
| CACAAAGTGAAATGCTTTCT+CGG | + | chr8_1:12025012-12025031 | None:intergenic | 35.0% | |
| ! | GGACATGTATTTTATAACGG+AGG | - | chr8_1:12025159-12025178 | Msa1179020:intron | 35.0% |
| GACTATGCATAGTTATCCAA+AGG | + | chr8_1:12025309-12025328 | None:intergenic | 35.0% | |
| ACTCATACACAAAAGTGAAG+GGG | - | chr8_1:12025411-12025430 | Msa1179020:intron | 35.0% | |
| ! | GATGTCCGACCTAATAATTT+TGG | - | chr8_1:12025456-12025475 | Msa1179020:intron | 35.0% |
| !! | TTTAATTTGGATGAGTGGTG+AGG | + | chr8_1:12025512-12025531 | None:intergenic | 35.0% |
| !! | GAGTGTTTAATTTGGATGAG+TGG | + | chr8_1:12025517-12025536 | None:intergenic | 35.0% |
| CTCCTTCATCATAGATTCAT+AGG | - | chr8_1:12025605-12025624 | Msa1179020:intron | 35.0% | |
| !!! | CTGCTATTTTATCCATTTGG+GGG | + | chr8_1:12025640-12025659 | None:intergenic | 35.0% |
| CCTACACTGCTTAATATTTC+TGG | + | chr8_1:12025717-12025736 | None:intergenic | 35.0% | |
| CCAGAAATATTAAGCAGTGT+AGG | - | chr8_1:12025714-12025733 | Msa1179020:intron | 35.0% | |
| ! | CTTTTCTATAATGGTGTGTG+TGG | + | chr8_1:12025740-12025759 | None:intergenic | 35.0% |
| CAAAAGGTTGTCACAAGAAA+TGG | + | chr8_1:12026269-12026288 | None:intergenic | 35.0% | |
| ! | CATTTCTTGTGACAACCTTT+TGG | - | chr8_1:12026267-12026286 | Msa1179020:intron | 35.0% |
| ATTATTGATGGGATCCTTGT+TGG | + | chr8_1:12026663-12026682 | None:intergenic | 35.0% | |
| TTGTTCTGCAATAATACACC+AGG | + | chr8_1:12026916-12026935 | None:intergenic | 35.0% | |
| GCTATAGCACAATTGTTTAG+TGG | + | chr8_1:12026956-12026975 | None:intergenic | 35.0% | |
| ! | AGACTTTTACCTACGAAGAA+AGG | - | chr8_1:12027227-12027246 | Msa1179020:intron | 35.0% |
| !!! | TAATGACGGATTTTATCCGT+AGG | - | chr8_1:12027255-12027274 | Msa1179020:intron | 35.0% |
| GCACATGTCTCAAACTTAAA+GGG | + | chr8_1:12027324-12027343 | None:intergenic | 35.0% | |
| CTAGATTGAAATAGTGATGG+TGG | + | chr8_1:12027405-12027424 | None:intergenic | 35.0% | |
| CTAAGCAAAAAGGGAAATGT+TGG | - | chr8_1:12027489-12027508 | Msa1179020:intron | 35.0% | |
| AGAAAGAAAGCAATAGGTGT+TGG | - | chr8_1:12028074-12028093 | Msa1179020:intron | 35.0% | |
| !! | GTAATAGGTGTTGTTTCCAT+AGG | - | chr8_1:12028280-12028299 | Msa1179020:intron | 35.0% |
| CATACTTACAAAGTGAGACT+TGG | + | chr8_1:12028337-12028356 | None:intergenic | 35.0% | |
| AGAGACAATGAACAATGAAG+TGG | - | chr8_1:12028425-12028444 | Msa1179020:CDS | 35.0% | |
| AACTTTCTCCAACCTTTCTT+TGG | + | chr8_1:12028492-12028511 | None:intergenic | 35.0% | |
| GGTTGGAGAAAGTTATTAGA+AGG | - | chr8_1:12028498-12028517 | Msa1179020:CDS | 35.0% | |
| CGCAACAATGACATTTCAAA+TGG | - | chr8_1:12028605-12028624 | Msa1179020:CDS | 35.0% | |
| !!! | CAAATGGTTTTAAATCCACC+CGG | - | chr8_1:12028621-12028640 | Msa1179020:CDS | 35.0% |
| ! | GCGTTATGTCGATTAAAGAT+GGG | - | chr8_1:12028646-12028665 | Msa1179020:CDS | 35.0% |
| ! | TTTTCACTTAATCCACCTGG+TGG | - | chr8_1:12020495-12020514 | Msa1179020:CDS | 40.0% |
| ATGTGTAGGAGAAGCTATCT+TGG | - | chr8_1:12020578-12020597 | Msa1179020:CDS | 40.0% | |
| TGTGAGTGTGATACACATTC+CGG | + | chr8_1:12020739-12020758 | None:intergenic | 40.0% | |
| TTGCTTCAAACATGGTCACA+CGG | - | chr8_1:12020781-12020800 | Msa1179020:CDS | 40.0% | |
| ! | GTCTTGTGGTTTGAGATATG+TGG | - | chr8_1:12020982-12021001 | Msa1179020:intron | 40.0% |
| ! | GTACCTTTGTTTGTGTTTGG+TGG | - | chr8_1:12021067-12021086 | Msa1179020:intron | 40.0% |
| GAACCACCAAACACAAACAA+AGG | + | chr8_1:12021073-12021092 | None:intergenic | 40.0% | |
| AGAGTTGAATCTAGTGGAAG+TGG | - | chr8_1:12021116-12021135 | Msa1179020:intron | 40.0% | |
| ! | GGAAGTGGTTGATGTACAAA+AGG | - | chr8_1:12021131-12021150 | Msa1179020:intron | 40.0% |
| GGTTCATCCTCTCTTCTATA+GGG | + | chr8_1:12022069-12022088 | None:intergenic | 40.0% | |
| TGGTTCATCCTCTCTTCTAT+AGG | + | chr8_1:12022070-12022089 | None:intergenic | 40.0% | |
| TATCTCTCGCCATCAATTCA+AGG | + | chr8_1:12022174-12022193 | None:intergenic | 40.0% | |
| TCCCATGATACATTTGAGCA+AGG | - | chr8_1:12022379-12022398 | Msa1179020:intron | 40.0% | |
| AACGAATCCACTGCAACTAT+AGG | - | chr8_1:12022440-12022459 | Msa1179020:intron | 40.0% | |
| GAGAATTTGGAGACTATGAG+AGG | + | chr8_1:12022810-12022829 | None:intergenic | 40.0% | |
| TTGACATGCTAATCAGAGCA+CGG | - | chr8_1:12022919-12022938 | Msa1179020:intron | 40.0% | |
| GATTTATGATGTGCAGGTTG+AGG | + | chr8_1:12023025-12023044 | None:intergenic | 40.0% | |
| ATCTTCACATAGGTTCACAC+AGG | - | chr8_1:12023321-12023340 | Msa1179020:intron | 40.0% | |
| TCTTCACATAGGTTCACACA+GGG | - | chr8_1:12023322-12023341 | Msa1179020:intron | 40.0% | |
| GGATTAAAATTGGCCCAACA+TGG | - | chr8_1:12023871-12023890 | Msa1179020:intron | 40.0% | |
| ! | TTTTCGTTGGACACCATGTT+GGG | + | chr8_1:12023887-12023906 | None:intergenic | 40.0% |
| ! | GCTCAATGTGTAGTTTTCGT+TGG | + | chr8_1:12023900-12023919 | None:intergenic | 40.0% |
| CTACATAGGGATGAATATCG+AGG | + | chr8_1:12024046-12024065 | None:intergenic | 40.0% | |
| GAGAAAATGTTGATCGAGGA+TGG | + | chr8_1:12024130-12024149 | None:intergenic | 40.0% | |
| CAATGACAGTGTTCCCAAAT+GGG | - | chr8_1:12024170-12024189 | Msa1179020:intron | 40.0% | |
| AATGACAGTGTTCCCAAATG+GGG | - | chr8_1:12024171-12024190 | Msa1179020:intron | 40.0% | |
| AAGATTTCATGCATGGGACA+TGG | - | chr8_1:12024656-12024675 | Msa1179020:intron | 40.0% | |
| AGATTTCATGCATGGGACAT+GGG | - | chr8_1:12024657-12024676 | Msa1179020:intron | 40.0% | |
| GAGCCCCTTTATATAAGGAA+AGG | + | chr8_1:12024738-12024757 | None:intergenic | 40.0% | |
| !! | CACGAGAGATTACTTTTGCT+GGG | + | chr8_1:12024798-12024817 | None:intergenic | 40.0% |
| !! | TCACGAGAGATTACTTTTGC+TGG | + | chr8_1:12024799-12024818 | None:intergenic | 40.0% |
| AGTAGAAGGGATATTTACCG+TGG | + | chr8_1:12024842-12024861 | None:intergenic | 40.0% | |
| !! | CAAAGCAATAGGTGTTGGTA+AGG | - | chr8_1:12024905-12024924 | Msa1179020:intron | 40.0% |
| GCTAAAAGCGAAACGACATT+GGG | + | chr8_1:12025219-12025238 | None:intergenic | 40.0% | |
| TGCTAAAAGCGAAACGACAT+TGG | + | chr8_1:12025220-12025239 | None:intergenic | 40.0% | |
| !! | ATGTCGTTTCGCTTTTAGCA+AGG | - | chr8_1:12025220-12025239 | Msa1179020:intron | 40.0% |
| !! | TTCGCTTTTAGCAAGGTACA+CGG | - | chr8_1:12025227-12025246 | Msa1179020:intron | 40.0% |
| ATCTATGATGAAGGAGCAGT+TGG | + | chr8_1:12025601-12025620 | None:intergenic | 40.0% | |
| ATAATAGCTACCATCAGCGA+CGG | - | chr8_1:12025689-12025708 | Msa1179020:intron | 40.0% | |
| ! | TGGTAGTGTTTATCTGGTAG+TGG | + | chr8_1:12026429-12026448 | None:intergenic | 40.0% |
| ! | TGTGTGTGGTAGTGTTTATC+TGG | + | chr8_1:12026435-12026454 | None:intergenic | 40.0% |
| TTCTTCTTCTATGGTAGCCA+GGG | + | chr8_1:12026532-12026551 | None:intergenic | 40.0% | |
| TTTCTTCTTCTATGGTAGCC+AGG | + | chr8_1:12026533-12026552 | None:intergenic | 40.0% | |
| TGAATGGCGGCATTATTGAT+GGG | + | chr8_1:12026638-12026657 | None:intergenic | 40.0% | |
| TGTTGTAGAGTGCGTAGTAT+GGG | + | chr8_1:12026797-12026816 | None:intergenic | 40.0% | |
| GGCACATGTCTCAAACTTAA+AGG | + | chr8_1:12027325-12027344 | None:intergenic | 40.0% | |
| ! | AAGTTTGAGACATGTGCCAA+AGG | - | chr8_1:12027327-12027346 | Msa1179020:intron | 40.0% |
| TAGCAACCTTCCCATTACTA+CGG | - | chr8_1:12027422-12027441 | Msa1179020:intron | 40.0% | |
| ! | AAATGACCGTAGTAATGGGA+AGG | + | chr8_1:12027431-12027450 | None:intergenic | 40.0% |
| GCAAAAAGGGAAATGTTGGT+TGG | - | chr8_1:12027493-12027512 | Msa1179020:intron | 40.0% | |
| ! | GGATATCACGAGAGGAATTT+TGG | + | chr8_1:12027979-12027998 | None:intergenic | 40.0% |
| AGTAGAAGGGATATTTACCG+TGG | + | chr8_1:12024842-12024861 | None:intergenic | 40.0% | |
| ! | TCTTTGGTTCCTCAATGGTT+GGG | + | chr8_1:12028476-12028495 | None:intergenic | 40.0% |
| ! | TTCTTTGGTTCCTCAATGGT+TGG | + | chr8_1:12028477-12028496 | None:intergenic | 40.0% |
| ACCATTGAGGAACCAAAGAA+AGG | - | chr8_1:12028477-12028496 | Msa1179020:CDS | 40.0% | |
| ! | ACCTTTCTTTGGTTCCTCAA+TGG | + | chr8_1:12028481-12028500 | None:intergenic | 40.0% |
| TTGAGGAACCAAAGAAAGGT+TGG | - | chr8_1:12028481-12028500 | Msa1179020:CDS | 40.0% | |
| TATTAGAAGGGATAGGGAGT+TGG | - | chr8_1:12028511-12028530 | Msa1179020:CDS | 40.0% | |
| TTGGTTGTCCTACAAAGACA+AGG | - | chr8_1:12028530-12028549 | Msa1179020:intron | 40.0% | |
| CCATTTGTCCTTGTCTTTGT+AGG | + | chr8_1:12028541-12028560 | None:intergenic | 40.0% | |
| CCTACAAAGACAAGGACAAA+TGG | - | chr8_1:12028538-12028557 | Msa1179020:intron | 40.0% | |
| CAAAGACAAGGACAAATGGT+TGG | - | chr8_1:12028542-12028561 | Msa1179020:CDS | 40.0% | |
| AAATGGTTGGAGGATATGAG+AGG | - | chr8_1:12028555-12028574 | Msa1179020:CDS | 40.0% | |
| AATGGTTGGAGGATATGAGA+GGG | - | chr8_1:12028556-12028575 | Msa1179020:CDS | 40.0% | |
| TTTAATCGACATAACGCCAC+CGG | + | chr8_1:12028643-12028662 | None:intergenic | 40.0% | |
| ! | GGCGTTATGTCGATTAAAGA+TGG | - | chr8_1:12028645-12028664 | Msa1179020:CDS | 40.0% |
| ! | GATTTGCATTGGTACTTGGT+GGG | + | chr8_1:12028698-12028717 | None:intergenic | 40.0% |
| TCATAATTGTTGGCAACTGG+CGG | + | chr8_1:12028720-12028739 | None:intergenic | 40.0% | |
| TCGTCATAATTGTTGGCAAC+TGG | + | chr8_1:12028723-12028742 | None:intergenic | 40.0% | |
| AGTGGAATTCCTATCAACCG+TGG | - | chr8_1:12020690-12020709 | Msa1179020:CDS | 45.0% | |
| CGGTCACACCAAATTCCATT+TGG | - | chr8_1:12020801-12020820 | Msa1179020:intron | 45.0% | |
| ! | TCCATTTGGAGTTCTCTTCC+TGG | - | chr8_1:12020815-12020834 | Msa1179020:intron | 45.0% |
| ! | CCATTTGGAGTTCTCTTCCT+GGG | - | chr8_1:12020816-12020835 | Msa1179020:intron | 45.0% |
| TCTCTTCCTGGGAATGTGTT+TGG | - | chr8_1:12020827-12020846 | Msa1179020:intron | 45.0% | |
| GCAATACCAAACACATTCCC+AGG | + | chr8_1:12020836-12020855 | None:intergenic | 45.0% | |
| ! | TCCTGGTTCGCTTATTTGTG+AGG | - | chr8_1:12020900-12020919 | Msa1179020:intron | 45.0% |
| ! | CCTGGTTCGCTTATTTGTGA+GGG | - | chr8_1:12020901-12020920 | Msa1179020:intron | 45.0% |
| ! | CTGGTTCGCTTATTTGTGAG+GGG | - | chr8_1:12020902-12020921 | Msa1179020:intron | 45.0% |
| !! | TTGATGGCGAGAGATAACAC+AGG | - | chr8_1:12022178-12022197 | Msa1179020:intron | 45.0% |
| ! | TGATGGCGAGAGATAACACA+GGG | - | chr8_1:12022179-12022198 | Msa1179020:intron | 45.0% |
| AATAGGCATCAAGCCGTCAT+CGG | - | chr8_1:12022978-12022997 | Msa1179020:intron | 45.0% | |
| AACACGAACACACATAGCTC+TGG | - | chr8_1:12023294-12023313 | Msa1179020:intron | 45.0% | |
| CTCTGGACACATCTTCACAT+AGG | - | chr8_1:12023311-12023330 | Msa1179020:intron | 45.0% | |
| ! | TTTCTAGTAGCCTAGCGGTA+TGG | - | chr8_1:12023478-12023497 | Msa1179020:intron | 45.0% |
| ! | GTTTTCGTTGGACACCATGT+TGG | + | chr8_1:12023888-12023907 | None:intergenic | 45.0% |
| GTTGATTGTGTACGCTTGCT+TGG | + | chr8_1:12023937-12023956 | None:intergenic | 45.0% | |
| !! | CAAAAAAGTTGGTGTGGGAG+TGG | + | chr8_1:12023972-12023991 | None:intergenic | 45.0% |
| GACAAACTCTTAGCGCAAGA+GGG | + | chr8_1:12024011-12024030 | None:intergenic | 45.0% | |
| TGACAAACTCTTAGCGCAAG+AGG | + | chr8_1:12024012-12024031 | None:intergenic | 45.0% | |
| CTCTGTAGATTGAGATGGAG+AGG | + | chr8_1:12024074-12024093 | None:intergenic | 45.0% | |
| TTGGGAACACTGTCATTGGA+TGG | + | chr8_1:12024168-12024187 | None:intergenic | 45.0% | |
| CCATTTGGGAACACTGTCAT+TGG | + | chr8_1:12024172-12024191 | None:intergenic | 45.0% | |
| CCAATGACAGTGTTCCCAAA+TGG | - | chr8_1:12024169-12024188 | Msa1179020:intron | 45.0% | |
| TTCCCAAATGGGGCTGAAAA+TGG | - | chr8_1:12024181-12024200 | Msa1179020:intron | 45.0% | |
| ! | GACCATTTTCAGCCCCATTT+GGG | + | chr8_1:12024186-12024205 | None:intergenic | 45.0% |
| ! | AGACCATTTTCAGCCCCATT+TGG | + | chr8_1:12024187-12024206 | None:intergenic | 45.0% |
| TAAGGAAAGGAGAGCAGCAT+TGG | + | chr8_1:12024725-12024744 | None:intergenic | 45.0% | |
| TATTTACCGTGGAGGGGTTT+GGG | + | chr8_1:12024831-12024850 | None:intergenic | 45.0% | |
| ATATTTACCGTGGAGGGGTT+TGG | + | chr8_1:12024832-12024851 | None:intergenic | 45.0% | |
| AAGGGATATTTACCGTGGAG+GGG | + | chr8_1:12024837-12024856 | None:intergenic | 45.0% | |
| GAAGGGATATTTACCGTGGA+GGG | + | chr8_1:12024838-12024857 | None:intergenic | 45.0% | |
| AGAAGGGATATTTACCGTGG+AGG | + | chr8_1:12024839-12024858 | None:intergenic | 45.0% | |
| ! | TTCTCGGGACAAAGTGGATT+GGG | + | chr8_1:12024996-12025015 | None:intergenic | 45.0% |
| TTTCTCGGGACAAAGTGGAT+TGG | + | chr8_1:12024997-12025016 | None:intergenic | 45.0% | |
| AATGCTTTCTCGGGACAAAG+TGG | + | chr8_1:12025002-12025021 | None:intergenic | 45.0% | |
| AGGTACAAGTATCCCCCAAA+TGG | - | chr8_1:12025625-12025644 | Msa1179020:intron | 45.0% | |
| TCTTAACTGAGTGAGGTCCA+AGG | - | chr8_1:12026479-12026498 | Msa1179020:intron | 45.0% | |
| ! | ACCCACTTGTTGCACTATGT+GGG | + | chr8_1:12026505-12026524 | None:intergenic | 45.0% |
| GTGAATGGCGGCATTATTGA+TGG | + | chr8_1:12026639-12026658 | None:intergenic | 45.0% | |
| ATCCTTGTTGGAGTGAATGG+CGG | + | chr8_1:12026651-12026670 | None:intergenic | 45.0% | |
| ! | AGTATGGGAGTGCAATTGGA+AGG | + | chr8_1:12026782-12026801 | None:intergenic | 45.0% |
| GTGTTGTAGAGTGCGTAGTA+TGG | + | chr8_1:12026798-12026817 | None:intergenic | 45.0% | |
| !! | TCACGAGAGGAATTTTGGTG+AGG | + | chr8_1:12027974-12027993 | None:intergenic | 45.0% |
| TATTTACCGTGGAGGGGTTT+GGG | + | chr8_1:12024831-12024850 | None:intergenic | 45.0% | |
| ATATTTACCGTGGAGGGGTT+TGG | + | chr8_1:12024832-12024851 | None:intergenic | 45.0% | |
| AAGGGATATTTACCGTGGAG+GGG | + | chr8_1:12024837-12024856 | None:intergenic | 45.0% | |
| GAAGGGATATTTACCGTGGA+GGG | + | chr8_1:12024838-12024857 | None:intergenic | 45.0% | |
| AGAAGGGATATTTACCGTGG+AGG | + | chr8_1:12024839-12024858 | None:intergenic | 45.0% | |
| TTCCTCAATGGTTGGGGTTT+CGG | + | chr8_1:12028469-12028488 | None:intergenic | 45.0% | |
| ! | CTTTGGTTCCTCAATGGTTG+GGG | + | chr8_1:12028475-12028494 | None:intergenic | 45.0% |
| AGACAAGGACAAATGGTTGG+AGG | - | chr8_1:12028545-12028564 | Msa1179020:CDS | 45.0% | |
| GAGGATATGAGAGGGAACTT+GGG | - | chr8_1:12028564-12028583 | Msa1179020:CDS | 45.0% | |
| !!! | ATGGTTTTAAATCCACCCGG+TGG | - | chr8_1:12028624-12028643 | Msa1179020:CDS | 45.0% |
| TTAATCGACATAACGCCACC+GGG | + | chr8_1:12028642-12028661 | None:intergenic | 45.0% | |
| ! | GGATTTGCATTGGTACTTGG+TGG | + | chr8_1:12028699-12028718 | None:intergenic | 45.0% |
| !!! | ATAAGTAAATTTTTTTTTAT+AGG | - | chr8_1:12021944-12021963 | Msa1179020:intron | 5.0% |
| !!! | TAAGTAAATTTTTTTTTATA+GGG | - | chr8_1:12021945-12021964 | Msa1179020:intron | 5.0% |
| !!! | TAAAAAAAAAATTATTGTTT+TGG | - | chr8_1:12023609-12023628 | Msa1179020:intron | 5.0% |
| !!! | TAAAAAAAAAATTATTGTTT+TGG | - | chr8_1:12023609-12023628 | Msa1179020:intron | 5.0% |
| !!! | AAAAAAAAAAATTATTGTTT+TGG | - | chr8_1:12023774-12023793 | Msa1179020:intron | 5.0% |
| !! | AAATTTAAAAATATTAATGA+TGG | + | chr8_1:12024514-12024533 | None:intergenic | 5.0% |
| CCCAGGAAGAGAACTCCAAA+TGG | + | chr8_1:12020819-12020838 | None:intergenic | 50.0% | |
| CCCTCACAAATAAGCGAACC+AGG | + | chr8_1:12020904-12020923 | None:intergenic | 50.0% | |
| CACAGGGACATGATAAGTGC+TGG | - | chr8_1:12022195-12022214 | Msa1179020:intron | 50.0% | |
| !! | GGGACATGATAAGTGCTGGT+TGG | - | chr8_1:12022199-12022218 | Msa1179020:intron | 50.0% |
| ! | AGAGGCTGGTGTTAGTGGTA+TGG | - | chr8_1:12022326-12022345 | Msa1179020:intron | 50.0% |
| !! | AGCCACACCAAGCTTTGAAC+AGG | - | chr8_1:12022353-12022372 | Msa1179020:intron | 50.0% |
| ! | GACCTGTTCAAAGCTTGGTG+TGG | + | chr8_1:12022358-12022377 | None:intergenic | 50.0% |
| GGGAAGACCTGTTCAAAGCT+TGG | + | chr8_1:12022363-12022382 | None:intergenic | 50.0% | |
| !! | GGGGTTTGAGGGTGTTACAT+AGG | + | chr8_1:12022661-12022680 | None:intergenic | 50.0% |
| TGGCGTAGCACCTTGAACTT+CGG | + | chr8_1:12022721-12022740 | None:intergenic | 50.0% | |
| ATAGGCATCAAGCCGTCATC+GGG | - | chr8_1:12022979-12022998 | Msa1179020:intron | 50.0% | |
| ! | CACTGGGCCTCCCAATTTTT+GGG | - | chr8_1:12023377-12023396 | Msa1179020:intron | 50.0% |
| ! | ACTGGGCCTCCCAATTTTTG+GGG | - | chr8_1:12023378-12023397 | Msa1179020:intron | 50.0% |
| TATGGGCCCCAAAAATTGGG+AGG | + | chr8_1:12023387-12023406 | None:intergenic | 50.0% | |
| TGTGTACGCTTGCTTGGCTT+GGG | + | chr8_1:12023931-12023950 | None:intergenic | 50.0% | |
| TTGTGTACGCTTGCTTGGCT+TGG | + | chr8_1:12023932-12023951 | None:intergenic | 50.0% | |
| ATTTACCGTGGAGGGGTTTG+GGG | + | chr8_1:12024830-12024849 | None:intergenic | 50.0% | |
| !! | CGCGAGAAAGCATTTCACGA+CGG | - | chr8_1:12024942-12024961 | Msa1179020:intron | 50.0% |
| ! | ATTTCTGGATCCGTCGCTGA+TGG | + | chr8_1:12025702-12025721 | None:intergenic | 50.0% |
| TTGTTGCACTATGTGGGCCT+TGG | + | chr8_1:12026499-12026518 | None:intergenic | 50.0% | |
| GCCCACATAGTGCAACAAGT+GGG | - | chr8_1:12026501-12026520 | Msa1179020:intron | 50.0% | |
| ! | GACCCACTTGTTGCACTATG+TGG | + | chr8_1:12026506-12026525 | None:intergenic | 50.0% |
| TCTTCTATGGTAGCCAGGGA+TGG | + | chr8_1:12026528-12026547 | None:intergenic | 50.0% | |
| GGGATCCTTGTTGGAGTGAA+TGG | + | chr8_1:12026654-12026673 | None:intergenic | 50.0% | |
| ! | GCGTAGTATGGGAGTGCAAT+TGG | + | chr8_1:12026786-12026805 | None:intergenic | 50.0% |
| ! | AGTTGGTGCATCAAGGCCTT+TGG | + | chr8_1:12027346-12027365 | None:intergenic | 50.0% |
| ATTTACCGTGGAGGGGTTTG+GGG | + | chr8_1:12024830-12024849 | None:intergenic | 50.0% | |
| AACCGAAACCCCAACCATTG+AGG | - | chr8_1:12028464-12028483 | Msa1179020:CDS | 50.0% | |
| GGAGGATATGAGAGGGAACT+TGG | - | chr8_1:12028563-12028582 | Msa1179020:CDS | 50.0% | |
| ! | GGCGGATTTGCATTGGTACT+TGG | + | chr8_1:12028702-12028721 | None:intergenic | 50.0% |
| ! | CTAGCTTGCACAACACCACC+AGG | + | chr8_1:12020513-12020532 | None:intergenic | 55.0% |
| ! | GAGCAAGAGGCTGGTGTTAG+TGG | - | chr8_1:12022321-12022340 | Msa1179020:intron | 55.0% |
| ! | ATGTGCAGGTTGAGGACGCT+TGG | + | chr8_1:12023017-12023036 | None:intergenic | 55.0% |
| CACATAGGTTCACACAGGGC+CGG | - | chr8_1:12023326-12023345 | Msa1179020:intron | 55.0% | |
| CCAAAAATTGGGAGGCCCAG+TGG | + | chr8_1:12023379-12023398 | None:intergenic | 55.0% | |
| ! | CCACTGGGCCTCCCAATTTT+TGG | - | chr8_1:12023376-12023395 | Msa1179020:intron | 55.0% |
| !! | TTGCTTGGCTTGGGGTTCTG+GGG | + | chr8_1:12023922-12023941 | None:intergenic | 55.0% |
| !! | CTTGCTTGGCTTGGGGTTCT+GGG | + | chr8_1:12023923-12023942 | None:intergenic | 55.0% |
| ! | GTGTACGCTTGCTTGGCTTG+GGG | + | chr8_1:12023930-12023949 | None:intergenic | 55.0% |
| ! | AGTTGGTGTGGGAGTGGATG+AGG | + | chr8_1:12023966-12023985 | None:intergenic | 55.0% |
| GGCCCACATAGTGCAACAAG+TGG | - | chr8_1:12026500-12026519 | Msa1179020:intron | 55.0% | |
| TGCCGCCATTCACTCCAACA+AGG | - | chr8_1:12026646-12026665 | Msa1179020:intron | 55.0% | |
| TGGGGACTGGATATCACGAG+AGG | + | chr8_1:12024812-12024831 | None:intergenic | 55.0% | |
| !! | GGTACTTGGTGGGTTTGCGT+CGG | + | chr8_1:12028688-12028707 | None:intergenic | 55.0% |
| !! | GGCAACTGGCGGATTTGCAT+TGG | + | chr8_1:12028709-12028728 | None:intergenic | 55.0% |
| GCTTGCACAACACCACCAGG+TGG | + | chr8_1:12020510-12020529 | None:intergenic | 60.0% | |
| TCGGCGTGAGTTCCCGATGA+CGG | + | chr8_1:12022994-12023013 | None:intergenic | 60.0% | |
| ! | GCAGGTTGAGGACGCTTGGT+CGG | + | chr8_1:12023013-12023032 | None:intergenic | 60.0% |
| TGGTCTAGCCCAACCTCGAC+GGG | + | chr8_1:12023359-12023378 | None:intergenic | 60.0% | |
| GTGGTCTAGCCCAACCTCGA+CGG | + | chr8_1:12023360-12023379 | None:intergenic | 60.0% | |
| ! | TCGAGGTTGGGCTAGACCAC+TGG | - | chr8_1:12023360-12023379 | Msa1179020:intron | 60.0% |
| ! | CGAGGTTGGGCTAGACCACT+GGG | - | chr8_1:12023361-12023380 | Msa1179020:intron | 60.0% |
| GTGCTGCGCGTGTATGCCTT+TGG | - | chr8_1:12023500-12023519 | Msa1179020:intron | 60.0% | |
| !! | GCTTGCTTGGCTTGGGGTTC+TGG | + | chr8_1:12023924-12023943 | None:intergenic | 60.0% |
| TGGTGTGGGAGTGGATGAGG+TGG | + | chr8_1:12023963-12023982 | None:intergenic | 60.0% | |
| GCAACAAGTGGGTCCATCCC+TGG | - | chr8_1:12026512-12026531 | Msa1179020:intron | 60.0% | |
| ATCGACATAACGCCACCGGG+TGG | + | chr8_1:12028639-12028658 | None:intergenic | 60.0% | |
| ! | GCGTCGGTACTGGGTGGATT+TGG | + | chr8_1:12028672-12028691 | None:intergenic | 60.0% |
| ! | GGTGGGTTTGCGTCGGTACT+GGG | + | chr8_1:12028681-12028700 | None:intergenic | 60.0% |
| !! | TGGTGGGTTTGCGTCGGTAC+TGG | + | chr8_1:12028682-12028701 | None:intergenic | 60.0% |
| !! | AACCTCGACGGGCTATGGGC+CGG | + | chr8_1:12023348-12023367 | None:intergenic | 65.0% |
| GCCCATAGCCCGTCGAGGTT+GGG | - | chr8_1:12023348-12023367 | Msa1179020:intron | 65.0% | |
| !! | GCCCAACCTCGACGGGCTAT+GGG | + | chr8_1:12023352-12023371 | None:intergenic | 65.0% |
| !! | AGCCCAACCTCGACGGGCTA+TGG | + | chr8_1:12023353-12023372 | None:intergenic | 65.0% |
| ACGCGCAGCACCATACCGCT+AGG | + | chr8_1:12023491-12023510 | None:intergenic | 65.0% | |
| CCAGTCCCCAAACCCCTCCA+CGG | - | chr8_1:12024822-12024841 | Msa1179020:intron | 65.0% | |
| CCAGTCCCCAAACCCCTCCA+CGG | - | chr8_1:12024822-12024841 | Msa1179020:intron | 65.0% | |
| ! | GGGTTTGCGTCGGTACTGGG+TGG | + | chr8_1:12028678-12028697 | None:intergenic | 65.0% |
| GGCCCATAGCCCGTCGAGGT+TGG | - | chr8_1:12023347-12023366 | Msa1179020:intron | 70.0% | |
| CCGTGGAGGGGTTTGGGGAC+TGG | + | chr8_1:12024825-12024844 | None:intergenic | 70.0% | |
| CCGTGGAGGGGTTTGGGGAC+TGG | + | chr8_1:12024825-12024844 | None:intergenic | 70.0% | |
| ! | GGCCGGCCCATAGCCCGTCG+AGG | - | chr8_1:12023343-12023362 | Msa1179020:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 12020447 | 12028779 | 12020447 | ID=Msa1179020;Name=Msa1179020 |
| chr8_1 | mRNA | 12020447 | 12028779 | 12020447 | ID=Msa1179020-mRNA-1;Parent=Msa1179020;Name=Msa1179020-mRNA-1;_AED=0.24;_eAED=0.34;_QI=0|0|0|1|0|0|4|0|273 |
| chr8_1 | exon | 12028540 | 12028779 | 12028540 | ID=Msa1179020-mRNA-1:exon:4267;Parent=Msa1179020-mRNA-1 |
| chr8_1 | exon | 12028303 | 12028534 | 12028303 | ID=Msa1179020-mRNA-1:exon:4266;Parent=Msa1179020-mRNA-1 |
| chr8_1 | exon | 12020641 | 12020802 | 12020641 | ID=Msa1179020-mRNA-1:exon:4265;Parent=Msa1179020-mRNA-1 |
| chr8_1 | exon | 12020447 | 12020631 | 12020447 | ID=Msa1179020-mRNA-1:exon:4264;Parent=Msa1179020-mRNA-1 |
| chr8_1 | CDS | 12028540 | 12028779 | 12028540 | ID=Msa1179020-mRNA-1:cds;Parent=Msa1179020-mRNA-1 |
| chr8_1 | CDS | 12028303 | 12028534 | 12028303 | ID=Msa1179020-mRNA-1:cds;Parent=Msa1179020-mRNA-1 |
| chr8_1 | CDS | 12020641 | 12020802 | 12020641 | ID=Msa1179020-mRNA-1:cds;Parent=Msa1179020-mRNA-1 |
| chr8_1 | CDS | 12020447 | 12020631 | 12020447 | ID=Msa1179020-mRNA-1:cds;Parent=Msa1179020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
