Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0565620 | XP_003629873.1 | 94.022 | 184 | 11 | 0 | 1 | 184 | 1 | 184 | 7.74e-128 | 367 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0565620 | sp|O04147|CPD_ARATH | 56.497 | 177 | 77 | 0 | 7 | 183 | 5 | 181 | 3.41e-72 | 218 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0565620 | G7L7Z2 | 94.022 | 184 | 11 | 0 | 1 | 184 | 1 | 184 | 3.69e-128 | 367 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0565620 | 0.814915 | 1.207829e-51 | -8.615850e-47 |
| Msa0006290 | Msa0565620 | -0.804968 | 1.674093e-49 | -8.615850e-47 |
| Msa0006880 | Msa0565620 | -0.807654 | 4.548000e-50 | -8.615850e-47 |
| Msa0008410 | Msa0565620 | -0.801054 | 1.079167e-48 | -8.615850e-47 |
| Msa0010850 | Msa0565620 | -0.804626 | 1.973218e-49 | -8.615850e-47 |
| Msa0014830 | Msa0565620 | -0.817175 | 3.779595e-52 | -8.615850e-47 |
| Msa0021090 | Msa0565620 | 0.807613 | 4.640520e-50 | -8.615850e-47 |
| Msa0029260 | Msa0565620 | -0.861009 | 1.386214e-63 | -8.615850e-47 |
| Msa0030300 | Msa0565620 | -0.805005 | 1.645111e-49 | -8.615850e-47 |
| Msa0033880 | Msa0565620 | -0.811714 | 6.098535e-51 | -8.615850e-47 |
| Msa0036370 | Msa0565620 | -0.832657 | 8.340847e-56 | -8.615850e-47 |
| Msa0038870 | Msa0565620 | -0.801298 | 9.618448e-49 | -8.615850e-47 |
| Msa0043170 | Msa0565620 | -0.817659 | 2.939718e-52 | -8.615850e-47 |
| Msa0052860 | Msa0565620 | -0.806220 | 9.141972e-50 | -8.615850e-47 |
| Msa0068020 | Msa0565620 | -0.812501 | 4.107500e-51 | -8.615850e-47 |
| Msa0068430 | Msa0565620 | -0.803722 | 3.043176e-49 | -8.615850e-47 |
| Msa0074750 | Msa0565620 | -0.808581 | 2.886253e-50 | -8.615850e-47 |
| Msa0077900 | Msa0565620 | -0.810044 | 1.401959e-50 | -8.615850e-47 |
| Msa0081230 | Msa0565620 | -0.809486 | 1.848054e-50 | -8.615850e-47 |
| Msa0091610 | Msa0565620 | -0.802501 | 5.445428e-49 | -8.615850e-47 |
| Msa0092170 | Msa0565620 | -0.822592 | 2.181464e-53 | -8.615850e-47 |
| Msa0095010 | Msa0565620 | -0.813810 | 2.119969e-51 | -8.615850e-47 |
| Msa0100300 | Msa0565620 | -0.803378 | 3.586577e-49 | -8.615850e-47 |
| Msa0101690 | Msa0565620 | -0.803721 | 3.045008e-49 | -8.615850e-47 |
| Msa0115370 | Msa0565620 | -0.814200 | 1.739067e-51 | -8.615850e-47 |
| Msa0115460 | Msa0565620 | -0.800695 | 1.277691e-48 | -8.615850e-47 |
| Msa0115990 | Msa0565620 | -0.813647 | 2.302527e-51 | -8.615850e-47 |
| Msa0127040 | Msa0565620 | -0.829682 | 4.489361e-55 | -8.615850e-47 |
| Msa0127850 | Msa0565620 | -0.821660 | 3.588507e-53 | -8.615850e-47 |
| Msa0131450 | Msa0565620 | -0.824531 | 7.674025e-54 | -8.615850e-47 |
| Msa0140400 | Msa0565620 | -0.805503 | 1.293413e-49 | -8.615850e-47 |
| Msa0145520 | Msa0565620 | -0.820026 | 8.523907e-53 | -8.615850e-47 |
| Msa0148120 | Msa0565620 | -0.805499 | 1.296032e-49 | -8.615850e-47 |
| Msa0165950 | Msa0565620 | -0.827535 | 1.483126e-54 | -8.615850e-47 |
| Msa0165970 | Msa0565620 | -0.808893 | 2.476530e-50 | -8.615850e-47 |
| Msa0169300 | Msa0565620 | -0.859348 | 4.402772e-63 | -8.615850e-47 |
| Msa0174000 | Msa0565620 | -0.801431 | 9.031606e-49 | -8.615850e-47 |
| Msa0177700 | Msa0565620 | 0.816938 | 4.272155e-52 | -8.615850e-47 |
| Msa0180120 | Msa0565620 | -0.820946 | 5.243697e-53 | -8.615850e-47 |
| Msa0182280 | Msa0565620 | -0.823795 | 1.142494e-53 | -8.615850e-47 |
| Msa0183460 | Msa0565620 | -0.851013 | 1.170318e-60 | -8.615850e-47 |
| Msa0183870 | Msa0565620 | -0.802872 | 4.564216e-49 | -8.615850e-47 |
| Msa0186310 | Msa0565620 | -0.807782 | 4.272820e-50 | -8.615850e-47 |
| Msa0186770 | Msa0565620 | -0.819855 | 9.328577e-53 | -8.615850e-47 |
| Msa0188680 | Msa0565620 | 0.832850 | 7.470770e-56 | -8.615850e-47 |
| Msa0189520 | Msa0565620 | -0.806916 | 6.519343e-50 | -8.615850e-47 |
| Msa0199690 | Msa0565620 | -0.807934 | 3.965118e-50 | -8.615850e-47 |
| Msa0210250 | Msa0565620 | -0.811263 | 7.641565e-51 | -8.615850e-47 |
| Msa0210510 | Msa0565620 | 0.811406 | 7.112429e-51 | -8.615850e-47 |
| Msa0224030 | Msa0565620 | -0.807695 | 4.458412e-50 | -8.615850e-47 |
| Msa0231790 | Msa0565620 | -0.817158 | 3.811905e-52 | -8.615850e-47 |
| Msa0233350 | Msa0565620 | -0.805463 | 1.318852e-49 | -8.615850e-47 |
| Msa0236270 | Msa0565620 | -0.819400 | 1.184690e-52 | -8.615850e-47 |
| Msa0372660 | Msa0565620 | -0.800450 | 1.432848e-48 | -8.615850e-47 |
| Msa0372670 | Msa0565620 | -0.816126 | 6.493120e-52 | -8.615850e-47 |
| Msa0377900 | Msa0565620 | 0.846917 | 1.607064e-59 | -8.615850e-47 |
| Msa0378110 | Msa0565620 | 0.819991 | 8.683762e-53 | -8.615850e-47 |
| Msa0387910 | Msa0565620 | -0.819008 | 1.454739e-52 | -8.615850e-47 |
| Msa0392270 | Msa0565620 | -0.810292 | 1.239521e-50 | -8.615850e-47 |
| Msa0394340 | Msa0565620 | -0.801696 | 7.971483e-49 | -8.615850e-47 |
| Msa0404700 | Msa0565620 | -0.820796 | 5.674874e-53 | -8.615850e-47 |
| Msa0408390 | Msa0565620 | -0.822910 | 1.839281e-53 | -8.615850e-47 |
| Msa0419520 | Msa0565620 | -0.860996 | 1.398492e-63 | -8.615850e-47 |
| Msa0419640 | Msa0565620 | 0.846976 | 1.548205e-59 | -8.615850e-47 |
| Msa0421260 | Msa0565620 | -0.811332 | 7.381595e-51 | -8.615850e-47 |
| Msa0436190 | Msa0565620 | -0.822983 | 1.768574e-53 | -8.615850e-47 |
| Msa0439230 | Msa0565620 | -0.810341 | 1.209785e-50 | -8.615850e-47 |
| Msa0439890 | Msa0565620 | -0.853127 | 2.933860e-61 | -8.615850e-47 |
| Msa0441980 | Msa0565620 | -0.803731 | 3.030558e-49 | -8.615850e-47 |
| Msa0443430 | Msa0565620 | -0.818170 | 2.254440e-52 | -8.615850e-47 |
| Msa0458780 | Msa0565620 | -0.804567 | 2.030044e-49 | -8.615850e-47 |
| Msa0462540 | Msa0565620 | -0.819672 | 1.027048e-52 | -8.615850e-47 |
| Msa0465550 | Msa0565620 | -0.864037 | 1.622261e-64 | -8.615850e-47 |
| Msa0467260 | Msa0565620 | 0.809133 | 2.199601e-50 | -8.615850e-47 |
| Msa0473820 | Msa0565620 | 0.807065 | 6.063285e-50 | -8.615850e-47 |
| Msa0473830 | Msa0565620 | 0.813502 | 2.477806e-51 | -8.615850e-47 |
| Msa0239940 | Msa0565620 | -0.828967 | 6.696599e-55 | -8.615850e-47 |
| Msa0244980 | Msa0565620 | -0.805807 | 1.116937e-49 | -8.615850e-47 |
| Msa0250670 | Msa0565620 | -0.809547 | 1.792517e-50 | -8.615850e-47 |
| Msa0251770 | Msa0565620 | -0.824400 | 8.239424e-54 | -8.615850e-47 |
| Msa0258880 | Msa0565620 | 0.800303 | 1.535365e-48 | -8.615850e-47 |
| Msa0261720 | Msa0565620 | -0.802207 | 6.258450e-49 | -8.615850e-47 |
| Msa0264530 | Msa0565620 | -0.810406 | 1.171260e-50 | -8.615850e-47 |
| Msa0266210 | Msa0565620 | -0.805048 | 1.611454e-49 | -8.615850e-47 |
| Msa0267870 | Msa0565620 | -0.815469 | 9.096990e-52 | -8.615850e-47 |
| Msa0270220 | Msa0565620 | 0.855695 | 5.307954e-62 | -8.615850e-47 |
| Msa0271360 | Msa0565620 | -0.803761 | 2.988005e-49 | -8.615850e-47 |
| Msa0279210 | Msa0565620 | 0.803627 | 3.185597e-49 | -8.615850e-47 |
| Msa0280430 | Msa0565620 | -0.812754 | 3.615792e-51 | -8.615850e-47 |
| Msa0281480 | Msa0565620 | -0.818731 | 1.681996e-52 | -8.615850e-47 |
| Msa0284820 | Msa0565620 | -0.813637 | 2.314313e-51 | -8.615850e-47 |
| Msa0289400 | Msa0565620 | -0.813925 | 1.999378e-51 | -8.615850e-47 |
| Msa0290760 | Msa0565620 | -0.806544 | 7.814428e-50 | -8.615850e-47 |
| Msa0291520 | Msa0565620 | -0.815391 | 9.468252e-52 | -8.615850e-47 |
| Msa0296920 | Msa0565620 | -0.811449 | 6.961746e-51 | -8.615850e-47 |
| Msa0300120 | Msa0565620 | -0.813215 | 2.865210e-51 | -8.615850e-47 |
| Msa0304330 | Msa0565620 | -0.803623 | 3.191352e-49 | -8.615850e-47 |
| Msa0307830 | Msa0565620 | 0.842813 | 2.055431e-58 | -8.615850e-47 |
| Msa0308200 | Msa0565620 | -0.833471 | 5.233383e-56 | -8.615850e-47 |
| Msa0308220 | Msa0565620 | -0.820752 | 5.810998e-53 | -8.615850e-47 |
| Msa0309880 | Msa0565620 | -0.806984 | 6.307643e-50 | -8.615850e-47 |
| Msa0310410 | Msa0565620 | -0.821219 | 4.536093e-53 | -8.615850e-47 |
| Msa0320610 | Msa0565620 | -0.834918 | 2.269965e-56 | -8.615850e-47 |
| Msa0322590 | Msa0565620 | -0.808175 | 3.524523e-50 | -8.615850e-47 |
| Msa0327410 | Msa0565620 | -0.828214 | 1.018187e-54 | -8.615850e-47 |
| Msa0335320 | Msa0565620 | 0.803134 | 4.029135e-49 | -8.615850e-47 |
| Msa0343190 | Msa0565620 | -0.832098 | 1.147385e-55 | -8.615850e-47 |
| Msa0347610 | Msa0565620 | -0.801090 | 1.060770e-48 | -8.615850e-47 |
| Msa0359560 | Msa0565620 | -0.833708 | 4.567368e-56 | -8.615850e-47 |
| Msa0363170 | Msa0565620 | -0.818166 | 2.258747e-52 | -8.615850e-47 |
| Msa0484740 | Msa0565620 | -0.807826 | 4.181619e-50 | -8.615850e-47 |
| Msa0485120 | Msa0565620 | -0.810734 | 9.947486e-51 | -8.615850e-47 |
| Msa0489610 | Msa0565620 | -0.824121 | 9.584103e-54 | -8.615850e-47 |
| Msa0493920 | Msa0565620 | -0.827964 | 1.169329e-54 | -8.615850e-47 |
| Msa0511490 | Msa0565620 | -0.813886 | 2.039303e-51 | -8.615850e-47 |
| Msa0514180 | Msa0565620 | -0.803374 | 3.594782e-49 | -8.615850e-47 |
| Msa0518070 | Msa0565620 | 0.816768 | 4.664475e-52 | -8.615850e-47 |
| Msa0524600 | Msa0565620 | -0.831427 | 1.679955e-55 | -8.615850e-47 |
| Msa0534410 | Msa0565620 | -0.818966 | 1.487822e-52 | -8.615850e-47 |
| Msa0550570 | Msa0565620 | -0.803034 | 4.226665e-49 | -8.615850e-47 |
| Msa0552810 | Msa0565620 | -0.800891 | 1.164756e-48 | -8.615850e-47 |
| Msa0556790 | Msa0565620 | -0.805416 | 1.348857e-49 | -8.615850e-47 |
| Msa0557480 | Msa0565620 | -0.802728 | 4.888382e-49 | -8.615850e-47 |
| Msa0560470 | Msa0565620 | -0.801602 | 8.335179e-49 | -8.615850e-47 |
| Msa0565620 | Msa0581130 | -0.814660 | 1.376088e-51 | -8.615850e-47 |
| Msa0565620 | Msa0586850 | -0.815613 | 8.453556e-52 | -8.615850e-47 |
| Msa0565620 | Msa0590650 | -0.844484 | 7.345585e-59 | -8.615850e-47 |
| Msa0565620 | Msa0603670 | -0.802661 | 5.047329e-49 | -8.615850e-47 |
| Msa0565620 | Msa0609000 | -0.844135 | 9.120360e-59 | -8.615850e-47 |
| Msa0565620 | Msa0609970 | -0.805177 | 1.513888e-49 | -8.615850e-47 |
| Msa0565620 | Msa0610390 | -0.845467 | 3.989179e-59 | -8.615850e-47 |
| Msa0565620 | Msa0614510 | -0.835085 | 2.059688e-56 | -8.615850e-47 |
| Msa0565620 | Msa0614990 | -0.808269 | 3.365090e-50 | -8.615850e-47 |
| Msa0565620 | Msa0617260 | -0.809324 | 2.001872e-50 | -8.615850e-47 |
| Msa0565620 | Msa0618200 | 0.925517 | 1.648449e-90 | -8.615850e-47 |
| Msa0565620 | Msa0618930 | -0.832198 | 1.083636e-55 | -8.615850e-47 |
| Msa0565620 | Msa0618950 | -0.809255 | 2.070912e-50 | -8.615850e-47 |
| Msa0565620 | Msa0619920 | -0.813364 | 2.657778e-51 | -8.615850e-47 |
| Msa0565620 | Msa0620330 | -0.857596 | 1.465859e-62 | -8.615850e-47 |
| Msa0565620 | Msa0621080 | 0.802248 | 6.140097e-49 | -8.615850e-47 |
| Msa0565620 | Msa0628290 | -0.800459 | 1.426778e-48 | -8.615850e-47 |
| Msa0565620 | Msa0630950 | -0.812973 | 3.238051e-51 | -8.615850e-47 |
| Msa0565620 | Msa0647930 | -0.806202 | 9.222409e-50 | -8.615850e-47 |
| Msa0565620 | Msa0647950 | -0.808250 | 3.396241e-50 | -8.615850e-47 |
| Msa0565620 | Msa0650920 | -0.836245 | 1.047795e-56 | -8.615850e-47 |
| Msa0565620 | Msa0652300 | -0.816230 | 6.154992e-52 | -8.615850e-47 |
| Msa0565620 | Msa0657460 | 0.923668 | 1.959983e-89 | -8.615850e-47 |
| Msa0565620 | Msa0658390 | -0.816868 | 4.430455e-52 | -8.615850e-47 |
| Msa0565620 | Msa0659990 | -0.802287 | 6.027514e-49 | -8.615850e-47 |
| Msa0565620 | Msa0661090 | -0.805569 | 1.252947e-49 | -8.615850e-47 |
| Msa0565620 | Msa0662630 | -0.820684 | 6.022305e-53 | -8.615850e-47 |
| Msa0565620 | Msa0663900 | -0.828373 | 9.320132e-55 | -8.615850e-47 |
| Msa0565620 | Msa0669190 | -0.808493 | 3.014840e-50 | -8.615850e-47 |
| Msa0565620 | Msa0691690 | -0.803425 | 3.508384e-49 | -8.615850e-47 |
| Msa0565620 | Msa0692840 | -0.804731 | 1.876308e-49 | -8.615850e-47 |
| Msa0565620 | Msa0692940 | -0.829482 | 5.022053e-55 | -8.615850e-47 |
| Msa0565620 | Msa0693790 | -0.842486 | 2.511106e-58 | -8.615850e-47 |
| Msa0565620 | Msa0694840 | -0.815685 | 8.145948e-52 | -8.615850e-47 |
| Msa0565620 | Msa0697720 | -0.802817 | 4.686099e-49 | -8.615850e-47 |
| Msa0565620 | Msa0703110 | -0.826540 | 2.565149e-54 | -8.615850e-47 |
| Msa0565620 | Msa0705390 | -0.813012 | 3.174246e-51 | -8.615850e-47 |
| Msa0565620 | Msa0706390 | -0.824201 | 9.175315e-54 | -8.615850e-47 |
| Msa0565620 | Msa0709500 | -0.808587 | 2.879074e-50 | -8.615850e-47 |
| Msa0565620 | Msa0724830 | -0.807488 | 4.932674e-50 | -8.615850e-47 |
| Msa0565620 | Msa0726080 | -0.823796 | 1.142266e-53 | -8.615850e-47 |
| Msa0565620 | Msa0726830 | -0.811965 | 5.377802e-51 | -8.615850e-47 |
| Msa0565620 | Msa0726860 | -0.818547 | 1.851452e-52 | -8.615850e-47 |
| Msa0565620 | Msa0734960 | -0.807809 | 4.215421e-50 | -8.615850e-47 |
| Msa0565620 | Msa0738440 | -0.805998 | 1.018087e-49 | -8.615850e-47 |
| Msa0565620 | Msa0750430 | -0.814473 | 1.513652e-51 | -8.615850e-47 |
| Msa0565620 | Msa0750540 | -0.813102 | 3.034266e-51 | -8.615850e-47 |
| Msa0565620 | Msa0756930 | -0.823129 | 1.635123e-53 | -8.615850e-47 |
| Msa0565620 | Msa0774750 | -0.811335 | 7.369215e-51 | -8.615850e-47 |
| Msa0565620 | Msa0779090 | -0.814451 | 1.530347e-51 | -8.615850e-47 |
| Msa0565620 | Msa0780880 | -0.809875 | 1.524159e-50 | -8.615850e-47 |
| Msa0565620 | Msa0781270 | -0.832410 | 9.607088e-56 | -8.615850e-47 |
| Msa0565620 | Msa0790390 | 0.851443 | 8.844440e-61 | -8.615850e-47 |
| Msa0565620 | Msa0790850 | -0.804653 | 1.948056e-49 | -8.615850e-47 |
| Msa0565620 | Msa0793390 | -0.805390 | 1.366147e-49 | -8.615850e-47 |
| Msa0565620 | Msa0798000 | 0.825932 | 3.579803e-54 | -8.615850e-47 |
| Msa0565620 | Msa0802410 | -0.804794 | 1.820559e-49 | -8.615850e-47 |
| Msa0565620 | Msa0805500 | -0.812563 | 3.981349e-51 | -8.615850e-47 |
| Msa0565620 | Msa0814250 | -0.807711 | 4.422264e-50 | -8.615850e-47 |
| Msa0565620 | Msa0814630 | 0.817500 | 3.193807e-52 | -8.615850e-47 |
| Msa0565620 | Msa0819060 | -0.828557 | 8.412770e-55 | -8.615850e-47 |
| Msa0565620 | Msa0820530 | 0.831229 | 1.879031e-55 | -8.615850e-47 |
| Msa0565620 | Msa0822170 | -0.800772 | 1.232296e-48 | -8.615850e-47 |
| Msa0565620 | Msa0827280 | -0.812615 | 3.877199e-51 | -8.615850e-47 |
| Msa0565620 | Msa0830540 | -0.804739 | 1.869504e-49 | -8.615850e-47 |
| Msa0565620 | Msa0833190 | 0.800064 | 1.717469e-48 | -8.615850e-47 |
| Msa0565620 | Msa0836500 | -0.836447 | 9.308849e-57 | -8.615850e-47 |
| Msa0565620 | Msa0842830 | -0.828319 | 9.602077e-55 | -8.615850e-47 |
| Msa0565620 | Msa0844230 | -0.802104 | 6.570920e-49 | -8.615850e-47 |
| Msa0565620 | Msa0846230 | -0.822724 | 2.032614e-53 | -8.615850e-47 |
| Msa0565620 | Msa0855160 | 0.813689 | 2.254532e-51 | -8.615850e-47 |
| Msa0565620 | Msa0858440 | -0.809399 | 1.929152e-50 | -8.615850e-47 |
| Msa0565620 | Msa0869010 | -0.800579 | 1.349151e-48 | -8.615850e-47 |
| Msa0565620 | Msa0877710 | -0.800686 | 1.282893e-48 | -8.615850e-47 |
| Msa0565620 | Msa0879860 | -0.838089 | 3.536699e-57 | -8.615850e-47 |
| Msa0565620 | Msa0880040 | -0.800670 | 1.292797e-48 | -8.615850e-47 |
| Msa0565620 | Msa0888940 | -0.804234 | 2.382465e-49 | -8.615850e-47 |
| Msa0565620 | Msa0895310 | -0.802173 | 6.360139e-49 | -8.615850e-47 |
| Msa0565620 | Msa0899240 | 0.825133 | 5.533911e-54 | -8.615850e-47 |
| Msa0565620 | Msa0899350 | -0.826687 | 2.366139e-54 | -8.615850e-47 |
| Msa0565620 | Msa0901160 | 0.800309 | 1.531111e-48 | -8.615850e-47 |
| Msa0565620 | Msa0901450 | -0.803010 | 4.274265e-49 | -8.615850e-47 |
| Msa0565620 | Msa0921870 | -0.806407 | 8.349623e-50 | -8.615850e-47 |
| Msa0565620 | Msa0924150 | 0.840148 | 1.034960e-57 | -8.615850e-47 |
| Msa0565620 | Msa0930140 | -0.852929 | 3.342134e-61 | -8.615850e-47 |
| Msa0565620 | Msa0932570 | -0.810847 | 9.402530e-51 | -8.615850e-47 |
| Msa0565620 | Msa0942560 | 0.809563 | 1.779169e-50 | -8.615850e-47 |
| Msa0565620 | Msa0957450 | 0.806392 | 8.409562e-50 | -8.615850e-47 |
| Msa0565620 | Msa0960830 | -0.838953 | 2.116406e-57 | -8.615850e-47 |
| Msa0565620 | Msa0963090 | 0.811171 | 8.000634e-51 | -8.615850e-47 |
| Msa0565620 | Msa0966720 | 0.819991 | 8.683762e-53 | -8.615850e-47 |
| Msa0565620 | Msa0970530 | -0.811175 | 7.985555e-51 | -8.615850e-47 |
| Msa0565620 | Msa0970600 | -0.833381 | 5.509145e-56 | -8.615850e-47 |
| Msa0565620 | Msa0974810 | -0.819125 | 1.368451e-52 | -8.615850e-47 |
| Msa0565620 | Msa0976330 | -0.802269 | 6.078064e-49 | -8.615850e-47 |
| Msa0565620 | Msa0980940 | -0.832616 | 8.541254e-56 | -8.615850e-47 |
| Msa0565620 | Msa0983320 | 0.809311 | 2.014556e-50 | -8.615850e-47 |
| Msa0565620 | Msa1001350 | -0.818548 | 1.851238e-52 | -8.615850e-47 |
| Msa0565620 | Msa1002600 | 0.807898 | 4.037190e-50 | -8.615850e-47 |
| Msa0565620 | Msa1013040 | -0.801088 | 1.061876e-48 | -8.615850e-47 |
| Msa0565620 | Msa1025940 | -0.839703 | 1.352048e-57 | -8.615850e-47 |
| Msa0565620 | Msa1029970 | -0.809020 | 2.326054e-50 | -8.615850e-47 |
| Msa0565620 | Msa1048750 | 0.823778 | 1.153184e-53 | -8.615850e-47 |
| Msa0565620 | Msa1069660 | 0.806324 | 8.691776e-50 | -8.615850e-47 |
| Msa0565620 | Msa1070390 | -0.810546 | 1.092277e-50 | -8.615850e-47 |
| Msa0565620 | Msa1087510 | 0.830971 | 2.174427e-55 | -8.615850e-47 |
| Msa0565620 | Msa1088250 | 0.807186 | 5.716218e-50 | -8.615850e-47 |
| Msa0565620 | Msa1088290 | -0.802530 | 5.371067e-49 | -8.615850e-47 |
| Msa0565620 | Msa1089320 | -0.819003 | 1.458582e-52 | -8.615850e-47 |
| Msa0565620 | Msa1096230 | -0.810857 | 9.355436e-51 | -8.615850e-47 |
| Msa0565620 | Msa1100520 | 0.817307 | 3.529376e-52 | -8.615850e-47 |
| Msa0565620 | Msa1100530 | 0.825519 | 4.485885e-54 | -8.615850e-47 |
| Msa0565620 | Msa1100720 | -0.831734 | 1.411543e-55 | -8.615850e-47 |
| Msa0565620 | Msa1103660 | 0.812248 | 4.665174e-51 | -8.615850e-47 |
| Msa0565620 | Msa1126120 | 0.832525 | 8.995174e-56 | -8.615850e-47 |
| Msa0565620 | Msa1126850 | -0.805186 | 1.507724e-49 | -8.615850e-47 |
| Msa0565620 | Msa1130210 | 0.806589 | 7.644143e-50 | -8.615850e-47 |
| Msa0565620 | Msa1133400 | -0.805603 | 1.232738e-49 | -8.615850e-47 |
| Msa0565620 | Msa1135800 | 0.850330 | 1.820888e-60 | -8.615850e-47 |
| Msa0565620 | Msa1135810 | 0.859996 | 2.808871e-63 | -8.615850e-47 |
| Msa0565620 | Msa1152520 | -0.804614 | 1.984704e-49 | -8.615850e-47 |
| Msa0565620 | Msa1154490 | -0.815808 | 7.645919e-52 | -8.615850e-47 |
| Msa0565620 | Msa1158230 | -0.830684 | 2.557080e-55 | -8.615850e-47 |
| Msa0565620 | Msa1160360 | -0.814068 | 1.859973e-51 | -8.615850e-47 |
| Msa0565620 | Msa1163870 | -0.800998 | 1.107683e-48 | -8.615850e-47 |
| Msa0565620 | Msa1165960 | -0.813152 | 2.958137e-51 | -8.615850e-47 |
| Msa0565620 | Msa1169850 | 0.802488 | 5.478076e-49 | -8.615850e-47 |
| Msa0565620 | Msa1171360 | -0.807317 | 5.362300e-50 | -8.615850e-47 |
| Msa0565620 | Msa1171830 | -0.843419 | 1.417416e-58 | -8.615850e-47 |
| Msa0565620 | Msa1179020 | 0.802974 | 4.347955e-49 | -8.615850e-47 |
| Msa0565620 | Msa1192850 | -0.833589 | 4.890856e-56 | -8.615850e-47 |
| Msa0565620 | Msa1193950 | 0.807837 | 4.159244e-50 | -8.615850e-47 |
| Msa0565620 | Msa1199710 | -0.821434 | 4.045721e-53 | -8.615850e-47 |
| Msa0565620 | Msa1201830 | -0.818673 | 1.733484e-52 | -8.615850e-47 |
| Msa0565620 | Msa1203880 | -0.814522 | 1.475876e-51 | -8.615850e-47 |
| Msa0565620 | Msa1211050 | 0.831259 | 1.847154e-55 | -8.615850e-47 |
| Msa0565620 | Msa1216720 | -0.801982 | 6.964233e-49 | -8.615850e-47 |
| Msa0565620 | Msa1223810 | 0.827380 | 1.615272e-54 | -8.615850e-47 |
| Msa0565620 | Msa1246530 | 0.804293 | 2.315797e-49 | -8.615850e-47 |
| Msa0565620 | Msa1252740 | -0.803270 | 3.777322e-49 | -8.615850e-47 |
| Msa0565620 | Msa1255040 | 0.830685 | 2.555265e-55 | -8.615850e-47 |
| Msa0565620 | Msa1279590 | -0.803730 | 3.032492e-49 | -8.615850e-47 |
| Msa0565620 | Msa1294840 | -0.808940 | 2.418752e-50 | -8.615850e-47 |
| Msa0565620 | Msa1295110 | -0.807683 | 4.483105e-50 | -8.615850e-47 |
| Msa0565620 | Msa1295490 | 0.862328 | 5.479980e-64 | -8.615850e-47 |
| Msa0565620 | Msa1295930 | -0.802892 | 4.520676e-49 | -8.615850e-47 |
| Msa0565620 | Msa1296300 | -0.808041 | 3.762643e-50 | -8.615850e-47 |
| Msa0565620 | Msa1299820 | 0.805080 | 1.586313e-49 | -8.615850e-47 |
| Msa0565620 | Msa1300860 | -0.814050 | 1.876709e-51 | -8.615850e-47 |
| Msa0565620 | Msa1302190 | 0.806539 | 7.833578e-50 | -8.615850e-47 |
| Msa0565620 | Msa1306390 | -0.846064 | 2.746584e-59 | -8.615850e-47 |
| Msa0565620 | Msa1327490 | -0.840836 | 6.841329e-58 | -8.615850e-47 |
| Msa0565620 | Msa1339190 | -0.810179 | 1.310853e-50 | -8.615850e-47 |
| Msa0565620 | Msa1344850 | -0.808522 | 2.972273e-50 | -8.615850e-47 |
| Msa0565620 | Msa1350690 | -0.801642 | 8.176873e-49 | -8.615850e-47 |
| Msa0565620 | Msa1351550 | -0.804651 | 1.950429e-49 | -8.615850e-47 |
| Msa0565620 | Msa1355700 | -0.803299 | 3.724421e-49 | -8.615850e-47 |
| Msa0565620 | Msa1362420 | -0.808707 | 2.712875e-50 | -8.615850e-47 |
| Msa0565620 | Msa1364210 | -0.818432 | 1.966644e-52 | -8.615850e-47 |
| Msa0565620 | Msa1365860 | -0.826864 | 2.147005e-54 | -8.615850e-47 |
| Msa0565620 | Msa1366650 | -0.844720 | 6.346448e-59 | -8.615850e-47 |
| Msa0565620 | Msa1371090 | -0.810408 | 1.170174e-50 | -8.615850e-47 |
| Msa0565620 | Msa1372310 | -0.813924 | 2.000657e-51 | -8.615850e-47 |
| Msa0565620 | Msa1376130 | -0.805995 | 1.019952e-49 | -8.615850e-47 |
| Msa0565620 | Msa1383350 | -0.801536 | 8.596915e-49 | -8.615850e-47 |
| Msa0565620 | Msa1392010 | 0.805131 | 1.548161e-49 | -8.615850e-47 |
| Msa0565620 | Msa1397940 | -0.807739 | 4.362427e-50 | -8.615850e-47 |
| Msa0565620 | Msa1403580 | 0.860265 | 2.330847e-63 | -8.615850e-47 |
| Msa0565620 | Msa1408760 | 0.817880 | 2.621283e-52 | -8.615850e-47 |
| Msa0565620 | Msa1412930 | 0.920866 | 7.433276e-88 | -8.615850e-47 |
| Msa0565620 | Msa1423910 | -0.809379 | 1.948454e-50 | -8.615850e-47 |
| Msa0565620 | Msa1424780 | -0.806806 | 6.878990e-50 | -8.615850e-47 |
| Msa0565620 | Msa1425340 | -0.816216 | 6.199041e-52 | -8.615850e-47 |
| Msa0565620 | Msa1426920 | -0.812837 | 3.467388e-51 | -8.615850e-47 |
| Msa0565620 | Msa1436520 | -0.810743 | 9.905165e-51 | -8.615850e-47 |
| Msa0565620 | Msa1438640 | -0.806848 | 6.739330e-50 | -8.615850e-47 |
| Msa0565620 | Msa1443290 | 0.840244 | 9.770862e-58 | -8.615850e-47 |
| Msa0565620 | Msa1443610 | -0.806937 | 6.453122e-50 | -8.615850e-47 |
| Msa0565620 | Msa1458810 | -0.847442 | 1.153500e-59 | -8.615850e-47 |
| Msa0565620 | Msa1461280 | -0.829848 | 4.090355e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0565620 | MtrunA17_Chr8g0380011 | 94.022 | 184 | 11 | 0 | 1 | 184 | 1 | 184 | 7.11e-132 | 367 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0565620 | AT4G18930.1 | 56.497 | 177 | 77 | 0 | 7 | 183 | 5 | 181 | 3.46e-73 | 218 |
| Msa0565620 | AT4G18940.1 | 46.328 | 177 | 90 | 2 | 7 | 181 | 21 | 194 | 1.31e-53 | 169 |
Find 86 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGACCGAAGAGGGAATA+TGG | 0.228778 | 4_1:-66494081 | Msa0565620:five_prime_UTR |
| TCATCCCACCCCTCAGATTC+TGG | 0.259300 | 4_1:-66493679 | Msa0565620:CDS |
| CGGTCATGTGGGGTTCGAAC+TGG | 0.275943 | 4_1:+66493841 | None:intergenic |
| AACAAAGAAGGAGGTTTATT+CGG | 0.336401 | 4_1:-66493943 | Msa0565620:CDS |
| GTGGTGTTGGCAAGCTAGTT+TGG | 0.341344 | 4_1:+66492317 | None:intergenic |
| GAACTGGGGTCCACCGAATT+CGG | 0.348912 | 4_1:+66493857 | None:intergenic |
| TTTCCGCGTCATGTCATCTA+TGG | 0.349231 | 4_1:+66492075 | None:intergenic |
| AAGACAAATCTCTTAAATCT+TGG | 0.349286 | 4_1:-66492367 | Msa0565620:CDS |
| TTGAATTGTTATAACCGAAA+TGG | 0.353367 | 4_1:+66493634 | None:intergenic |
| GGTCATGTGGGGTTCGAACT+GGG | 0.353795 | 4_1:+66493842 | None:intergenic |
| AGTTTGTTGAGTGCATCGTC+TGG | 0.357178 | 4_1:+66493795 | None:intergenic |
| GCACACTGCTGCACCCATTT+CGG | 0.374682 | 4_1:-66493648 | Msa0565620:CDS |
| AGGCGGTCGCATACGTCTTC+CGG | 0.404707 | 4_1:+66493906 | None:intergenic |
| ACCGCCCTCCGATCCGAATT+CGG | 0.405972 | 4_1:-66493870 | Msa0565620:CDS |
| TGAATTGTTATAACCGAAAT+GGG | 0.412619 | 4_1:+66493635 | None:intergenic |
| AGACATACAGACAATATTAG+AGG | 0.431901 | 4_1:+66492234 | None:intergenic |
| AGACAAATCTCTTAAATCTT+GGG | 0.434674 | 4_1:-66492366 | Msa0565620:CDS |
| GTTTGTTGAGTGCATCGTCT+GGG | 0.440660 | 4_1:+66493796 | None:intergenic |
| ATATTCCCATATTCCCTCTT+CGG | 0.442010 | 4_1:+66494075 | None:intergenic |
| GAATCTGAGGGGTGGGATGA+AGG | 0.444860 | 4_1:+66493682 | None:intergenic |
| AAATATAAATTTGATGTAAG+TGG | 0.459228 | 4_1:-66494109 | Msa0565620:five_prime_UTR |
| TGGACAATTGACATGTTTCA+AGG | 0.465068 | 4_1:-66494035 | Msa0565620:five_prime_UTR |
| CAACACGGTCAACGGTGACT+TGG | 0.470908 | 4_1:+66493742 | None:intergenic |
| AATATAAATTTGATGTAAGT+GGG | 0.473291 | 4_1:-66494108 | Msa0565620:five_prime_UTR |
| TGCTCCCACGACGGTCATGT+GGG | 0.482469 | 4_1:+66493830 | None:intergenic |
| TTGCTCCCACGACGGTCATG+TGG | 0.500012 | 4_1:+66493829 | None:intergenic |
| GAAGACCGAAGAGGGAATAT+GGG | 0.501026 | 4_1:-66494080 | Msa0565620:five_prime_UTR |
| TTCGGTGTGGGCGATCCCAC+CGG | 0.504778 | 4_1:-66493925 | Msa0565620:CDS |
| TCTGAGGGGTGGGATGAAGG+AGG | 0.506267 | 4_1:+66493685 | None:intergenic |
| GAGTGATGAAGAGAAGCAAA+AGG | 0.529008 | 4_1:-66492477 | Msa0565620:CDS |
| TCGGAGGGCGGTCATGAGCT+TGG | 0.530142 | 4_1:+66493881 | None:intergenic |
| CCACACGTGAGCCTTCTGTA+TGG | 0.533433 | 4_1:-66492506 | Msa0565620:CDS |
| ACCGTTGACCGTGTTGCCGC+TGG | 0.533920 | 4_1:-66493735 | Msa0565620:CDS |
| GTCCACCGAATTCGGATCGG+AGG | 0.536297 | 4_1:+66493865 | None:intergenic |
| CATTGGTTTCCAGAATCTGA+GGG | 0.544773 | 4_1:+66493670 | None:intergenic |
| GTTTCCAGAATCTGAGGGGT+GGG | 0.544896 | 4_1:+66493675 | None:intergenic |
| GCATTGGTTTCCAGAATCTG+AGG | 0.548716 | 4_1:+66493669 | None:intergenic |
| GAAGGAGGTTTATTCGGTGT+GGG | 0.549645 | 4_1:-66493937 | Msa0565620:CDS |
| ATAAACACACTGATAAAAGA+AGG | 0.557198 | 4_1:+66493710 | None:intergenic |
| GTCATGTGGGGTTCGAACTG+GGG | 0.558588 | 4_1:+66493843 | None:intergenic |
| GCTTACTTATCTGAAAGCTC+AGG | 0.559929 | 4_1:+66492414 | None:intergenic |
| GGCAACATCAACAACAAAGA+AGG | 0.562958 | 4_1:-66493955 | Msa0565620:CDS |
| CGGTCGCATACGTCTTCCGG+TGG | 0.566606 | 4_1:+66493909 | None:intergenic |
| AGAAGGAGGTTTATTCGGTG+TGG | 0.570758 | 4_1:-66493938 | Msa0565620:CDS |
| TCCACCGAATTCGGATCGGA+GGG | 0.574564 | 4_1:+66493866 | None:intergenic |
| ACCAGCGGCAACACGGTCAA+CGG | 0.575403 | 4_1:+66493734 | None:intergenic |
| GGACAATTGACATGTTTCAA+GGG | 0.579784 | 4_1:-66494034 | Msa0565620:five_prime_UTR |
| CACTCAAATCTCCATACAGA+AGG | 0.585673 | 4_1:+66492495 | None:intergenic |
| CGGTCATGAGCTTGGTGAGG+CGG | 0.586534 | 4_1:+66493889 | None:intergenic |
| GGGTGAGTGAAGACCGAAGA+GGG | 0.588478 | 4_1:-66494088 | Msa0565620:five_prime_UTR |
| TGAAGTTGTGATGGTATAAG+TGG | 0.589557 | 4_1:+66492298 | None:intergenic |
| TGTGATGGTATAAGTGGTGT+TGG | 0.591568 | 4_1:+66492304 | None:intergenic |
| ATGGGTGCAGCAGTGTGCAT+TGG | 0.592009 | 4_1:+66493653 | None:intergenic |
| ATGGGAATATGCGGAGCATG+TGG | 0.593174 | 4_1:-66494062 | Msa0565620:five_prime_UTR |
| GGTTTCCAGAATCTGAGGGG+TGG | 0.595287 | 4_1:+66493674 | None:intergenic |
| TATGCGGAGCATGTGGCACA+TGG | 0.601063 | 4_1:-66494055 | Msa0565620:five_prime_UTR |
| ATAAATAGAACACAAGGCAG+TGG | 0.601235 | 4_1:+66492191 | None:intergenic |
| ACCGAATTCGGATCGGAGGG+CGG | 0.604262 | 4_1:+66493869 | None:intergenic |
| TTTGTTGAGTGCATCGTCTG+GGG | 0.606981 | 4_1:+66493797 | None:intergenic |
| TTGTTGTTGTCACAATCACA+AGG | 0.608163 | 4_1:+66494002 | None:intergenic |
| AAACTCCGATCAGCTTCTGA+AGG | 0.608276 | 4_1:-66493777 | Msa0565620:CDS |
| CAGAATATAAATAGAACACA+AGG | 0.610463 | 4_1:+66492185 | None:intergenic |
| TAACACCTTCAGAAGCTGAT+CGG | 0.616481 | 4_1:+66493772 | None:intergenic |
| GGGCGGTCATGAGCTTGGTG+AGG | 0.619509 | 4_1:+66493886 | None:intergenic |
| GCCCTCCGATCCGAATTCGG+TGG | 0.623631 | 4_1:-66493867 | Msa0565620:CDS |
| GGTCGCATACGTCTTCCGGT+GGG | 0.624642 | 4_1:+66493910 | None:intergenic |
| AGAAGGTACCAGCGGCAACA+CGG | 0.629802 | 4_1:+66493727 | None:intergenic |
| GGGGTCCACCGAATTCGGAT+CGG | 0.635044 | 4_1:+66493862 | None:intergenic |
| CAACACTTGTGAAGTTGTGA+TGG | 0.638158 | 4_1:+66492289 | None:intergenic |
| GCTCCCACGACGGTCATGTG+GGG | 0.646603 | 4_1:+66493831 | None:intergenic |
| AAGGAGAGGTGATTGATACT+CGG | 0.647076 | 4_1:-66493981 | Msa0565620:five_prime_UTR |
| GAGGTGATTGATACTCGGAA+TGG | 0.647720 | 4_1:-66493976 | Msa0565620:exon |
| GAACCCCACATGACCGTCGT+GGG | 0.656303 | 4_1:-66493834 | Msa0565620:CDS |
| AGAGGGAATATGGGAATATG+CGG | 0.657315 | 4_1:-66494071 | Msa0565620:five_prime_UTR |
| CGAACCCCACATGACCGTCG+TGG | 0.660724 | 4_1:-66493835 | Msa0565620:CDS |
| AACATCAACAACAAAGAAGG+AGG | 0.663933 | 4_1:-66493952 | Msa0565620:CDS |
| TGTTGTTGTCACAATCACAA+GGG | 0.667741 | 4_1:+66494003 | None:intergenic |
| TTGTGATTGTGACAACAACA+AGG | 0.668771 | 4_1:-66494000 | Msa0565620:five_prime_UTR |
| ATTCTTGATGACAGTCTCAG+TGG | 0.668867 | 4_1:-66492437 | Msa0565620:CDS |
| CCATACAGAAGGCTCACGTG+TGG | 0.675755 | 4_1:+66492506 | None:intergenic |
| ATTGGTTTCCAGAATCTGAG+GGG | 0.690122 | 4_1:+66493671 | None:intergenic |
| CTGATAAAAGAAGGTACCAG+CGG | 0.694151 | 4_1:+66493719 | None:intergenic |
| TAACTCTATTGCTCCCACGA+CGG | 0.696694 | 4_1:+66493821 | None:intergenic |
| ATTGTGACAACAACAAGGAG+AGG | 0.732687 | 4_1:-66493995 | Msa0565620:five_prime_UTR |
| GTGCCATAGATGACATGACG+CGG | 0.733710 | 4_1:-66492078 | Msa0565620:three_prime_UTR |
| TGGGTGAGTGAAGACCGAAG+AGG | 0.751231 | 4_1:-66494089 | Msa0565620:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATAAATTTGATGTAAG+TGG | - | chr4_1:66492063-66492082 | Msa0565620:three_prime_UTR | 15.0% |
| !! | AATATAAATTTGATGTAAGT+GGG | - | chr4_1:66492064-66492083 | Msa0565620:three_prime_UTR | 15.0% |
| !!! | GAGTTTTTTTTTATACTTTT+TGG | - | chr4_1:66493551-66493570 | Msa0565620:intron | 15.0% |
| !! | AAATATAAATTTGATGTAAG+TGG | - | chr4_1:66492063-66492082 | Msa0565620:three_prime_UTR | 15.0% |
| !! | AATATAAATTTGATGTAAGT+GGG | - | chr4_1:66492064-66492083 | Msa0565620:three_prime_UTR | 15.0% |
| !!! | GAGTTTTTTTTTATACTTTT+TGG | - | chr4_1:66493551-66493570 | Msa0565620:intron | 15.0% |
| !!! | ATATAAAGCGTATATTTTGA+TGG | - | chr4_1:66492621-66492640 | Msa0565620:intron | 20.0% |
| !!! | TATAAAGCGTATATTTTGAT+GGG | - | chr4_1:66492622-66492641 | Msa0565620:intron | 20.0% |
| !! | AGTCATATAAAAACATTACT+TGG | + | chr4_1:66494059-66494078 | None:intergenic | 20.0% |
| !!! | ATATAAAGCGTATATTTTGA+TGG | - | chr4_1:66492621-66492640 | Msa0565620:intron | 20.0% |
| !!! | TATAAAGCGTATATTTTGAT+GGG | - | chr4_1:66492622-66492641 | Msa0565620:intron | 20.0% |
| !! | AGTCATATAAAAACATTACT+TGG | + | chr4_1:66494059-66494078 | None:intergenic | 20.0% |
| ! | ATAAACACACTGATAAAAGA+AGG | + | chr4_1:66492465-66492484 | None:intergenic | 25.0% |
| ! | TGAATTGTTATAACCGAAAT+GGG | + | chr4_1:66492540-66492559 | None:intergenic | 25.0% |
| ! | TTGAATTGTTATAACCGAAA+TGG | + | chr4_1:66492541-66492560 | None:intergenic | 25.0% |
| ! | AAAATGAGTATGAGAGTAAA+AGG | + | chr4_1:66492580-66492599 | None:intergenic | 25.0% |
| ! | TTATAGTATCTGTTAGTGTT+TGG | + | chr4_1:66492692-66492711 | None:intergenic | 25.0% |
| ! | GATCAAATTCTACAAAGATA+TGG | + | chr4_1:66492717-66492736 | None:intergenic | 25.0% |
| ! | ACAAAATAAATAGTGTATCG+CGG | + | chr4_1:66492754-66492773 | None:intergenic | 25.0% |
| ! | TGTACAAAATATCGTCAAAT+AGG | - | chr4_1:66492771-66492790 | Msa0565620:intron | 25.0% |
| ! | TGAGATTTGAAAATCTCATT+AGG | + | chr4_1:66492998-66493017 | None:intergenic | 25.0% |
| !! | AATGAGATTTTCAAATCTCA+AGG | - | chr4_1:66492998-66493017 | Msa0565620:intron | 25.0% |
| !! | ATGAGATTTTCAAATCTCAA+GGG | - | chr4_1:66492999-66493018 | Msa0565620:intron | 25.0% |
| !!! | TTTTTTTGATTGATTCACCA+GGG | + | chr4_1:66493133-66493152 | None:intergenic | 25.0% |
| ! | CTTGGAACATAAATTGTTAT+CGG | - | chr4_1:66493313-66493332 | Msa0565620:intron | 25.0% |
| ! | TTGGAACATAAATTGTTATC+GGG | - | chr4_1:66493314-66493333 | Msa0565620:intron | 25.0% |
| ! | ATATATCTATCTTCCTTCAT+TGG | + | chr4_1:66493352-66493371 | None:intergenic | 25.0% |
| ! | AATTATGTAGCAATAGCATT+AGG | - | chr4_1:66493465-66493484 | Msa0565620:intron | 25.0% |
| ! | ATTATGTAGCAATAGCATTA+GGG | - | chr4_1:66493466-66493485 | Msa0565620:intron | 25.0% |
| ! | CATTAAAACAATGTACACAT+TGG | + | chr4_1:66493633-66493652 | None:intergenic | 25.0% |
| ! | AAGACAAATCTCTTAAATCT+TGG | - | chr4_1:66493805-66493824 | Msa0565620:CDS | 25.0% |
| ! | AGACAAATCTCTTAAATCTT+GGG | - | chr4_1:66493806-66493825 | Msa0565620:CDS | 25.0% |
| ! | CAGAATATAAATAGAACACA+AGG | + | chr4_1:66493990-66494009 | None:intergenic | 25.0% |
| ! | ATAAACACACTGATAAAAGA+AGG | + | chr4_1:66492465-66492484 | None:intergenic | 25.0% |
| ! | TGAATTGTTATAACCGAAAT+GGG | + | chr4_1:66492540-66492559 | None:intergenic | 25.0% |
| ! | TTGAATTGTTATAACCGAAA+TGG | + | chr4_1:66492541-66492560 | None:intergenic | 25.0% |
| ! | AAAATGAGTATGAGAGTAAA+AGG | + | chr4_1:66492580-66492599 | None:intergenic | 25.0% |
| ! | TTATAGTATCTGTTAGTGTT+TGG | + | chr4_1:66492692-66492711 | None:intergenic | 25.0% |
| ! | GATCAAATTCTACAAAGATA+TGG | + | chr4_1:66492717-66492736 | None:intergenic | 25.0% |
| ! | ACAAAATAAATAGTGTATCG+CGG | + | chr4_1:66492754-66492773 | None:intergenic | 25.0% |
| ! | TGTACAAAATATCGTCAAAT+AGG | - | chr4_1:66492771-66492790 | Msa0565620:intron | 25.0% |
| ! | TGAGATTTGAAAATCTCATT+AGG | + | chr4_1:66492998-66493017 | None:intergenic | 25.0% |
| !! | AATGAGATTTTCAAATCTCA+AGG | - | chr4_1:66492998-66493017 | Msa0565620:intron | 25.0% |
| !! | ATGAGATTTTCAAATCTCAA+GGG | - | chr4_1:66492999-66493018 | Msa0565620:intron | 25.0% |
| !!! | TTTTTTTGATTGATTCACCA+GGG | + | chr4_1:66493133-66493152 | None:intergenic | 25.0% |
| ! | CTTGGAACATAAATTGTTAT+CGG | - | chr4_1:66493313-66493332 | Msa0565620:intron | 25.0% |
| ! | TTGGAACATAAATTGTTATC+GGG | - | chr4_1:66493314-66493333 | Msa0565620:intron | 25.0% |
| ! | ATATATCTATCTTCCTTCAT+TGG | + | chr4_1:66493352-66493371 | None:intergenic | 25.0% |
| ! | AATTATGTAGCAATAGCATT+AGG | - | chr4_1:66493465-66493484 | Msa0565620:intron | 25.0% |
| ! | ATTATGTAGCAATAGCATTA+GGG | - | chr4_1:66493466-66493485 | Msa0565620:intron | 25.0% |
| ! | CATTAAAACAATGTACACAT+TGG | + | chr4_1:66493633-66493652 | None:intergenic | 25.0% |
| ! | AAGACAAATCTCTTAAATCT+TGG | - | chr4_1:66493805-66493824 | Msa0565620:CDS | 25.0% |
| ! | AGACAAATCTCTTAAATCTT+GGG | - | chr4_1:66493806-66493825 | Msa0565620:CDS | 25.0% |
| ! | CAGAATATAAATAGAACACA+AGG | + | chr4_1:66493990-66494009 | None:intergenic | 25.0% |
| AACAAAGAAGGAGGTTTATT+CGG | - | chr4_1:66492229-66492248 | Msa0565620:three_prime_UTR | 30.0% | |
| AAAGTTGTCAATTGTAGACT+GGG | + | chr4_1:66492847-66492866 | None:intergenic | 30.0% | |
| TAATCAAGTAGCAAAGAGTT+TGG | - | chr4_1:66492892-66492911 | Msa0565620:intron | 30.0% | |
| TCATTGCGATTGAATTCATA+TGG | - | chr4_1:66493104-66493123 | Msa0565620:intron | 30.0% | |
| !!! | GTTTTTTTGATTGATTCACC+AGG | + | chr4_1:66493134-66493153 | None:intergenic | 30.0% |
| !! | TCTGTTTAAGAAAAGTACTG+AGG | - | chr4_1:66493186-66493205 | Msa0565620:intron | 30.0% |
| GTAGATTGAATTGAACTCAA+GGG | + | chr4_1:66493288-66493307 | None:intergenic | 30.0% | |
| AGTAGATTGAATTGAACTCA+AGG | + | chr4_1:66493289-66493308 | None:intergenic | 30.0% | |
| CAATTCAATCTACTTTCTCT+TGG | - | chr4_1:66493295-66493314 | Msa0565620:intron | 30.0% | |
| TGGAACATAAATTGTTATCG+GGG | - | chr4_1:66493315-66493334 | Msa0565620:intron | 30.0% | |
| TACTTCAACTCAAACTTGTA+TGG | + | chr4_1:66493497-66493516 | None:intergenic | 30.0% | |
| AGACATACAGACAATATTAG+AGG | + | chr4_1:66493941-66493960 | None:intergenic | 30.0% | |
| AACAAAGAAGGAGGTTTATT+CGG | - | chr4_1:66492229-66492248 | Msa0565620:three_prime_UTR | 30.0% | |
| AAAGTTGTCAATTGTAGACT+GGG | + | chr4_1:66492847-66492866 | None:intergenic | 30.0% | |
| TAATCAAGTAGCAAAGAGTT+TGG | - | chr4_1:66492892-66492911 | Msa0565620:intron | 30.0% | |
| TCATTGCGATTGAATTCATA+TGG | - | chr4_1:66493104-66493123 | Msa0565620:intron | 30.0% | |
| !!! | GTTTTTTTGATTGATTCACC+AGG | + | chr4_1:66493134-66493153 | None:intergenic | 30.0% |
| !! | TCTGTTTAAGAAAAGTACTG+AGG | - | chr4_1:66493186-66493205 | Msa0565620:intron | 30.0% |
| GTAGATTGAATTGAACTCAA+GGG | + | chr4_1:66493288-66493307 | None:intergenic | 30.0% | |
| AGTAGATTGAATTGAACTCA+AGG | + | chr4_1:66493289-66493308 | None:intergenic | 30.0% | |
| CAATTCAATCTACTTTCTCT+TGG | - | chr4_1:66493295-66493314 | Msa0565620:intron | 30.0% | |
| TGGAACATAAATTGTTATCG+GGG | - | chr4_1:66493315-66493334 | Msa0565620:intron | 30.0% | |
| TACTTCAACTCAAACTTGTA+TGG | + | chr4_1:66493497-66493516 | None:intergenic | 30.0% | |
| AGACATACAGACAATATTAG+AGG | + | chr4_1:66493941-66493960 | None:intergenic | 30.0% | |
| ATATTCCCATATTCCCTCTT+CGG | + | chr4_1:66492100-66492119 | None:intergenic | 35.0% | |
| TGGACAATTGACATGTTTCA+AGG | - | chr4_1:66492137-66492156 | Msa0565620:three_prime_UTR | 35.0% | |
| GGACAATTGACATGTTTCAA+GGG | - | chr4_1:66492138-66492157 | Msa0565620:three_prime_UTR | 35.0% | |
| TGTTGTTGTCACAATCACAA+GGG | + | chr4_1:66492172-66492191 | None:intergenic | 35.0% | |
| ! | TTGTTGTTGTCACAATCACA+AGG | + | chr4_1:66492173-66492192 | None:intergenic | 35.0% |
| TTGTGATTGTGACAACAACA+AGG | - | chr4_1:66492172-66492191 | Msa0565620:three_prime_UTR | 35.0% | |
| AACATCAACAACAAAGAAGG+AGG | - | chr4_1:66492220-66492239 | Msa0565620:three_prime_UTR | 35.0% | |
| !!! | AAAGCGTATATTTTGATGGG+TGG | - | chr4_1:66492625-66492644 | Msa0565620:intron | 35.0% |
| !!! | AAGCGTATATTTTGATGGGT+GGG | - | chr4_1:66492626-66492645 | Msa0565620:intron | 35.0% |
| AAGTTGTCAATTGTAGACTG+GGG | + | chr4_1:66492846-66492865 | None:intergenic | 35.0% | |
| CAAAGTTGTCAATTGTAGAC+TGG | + | chr4_1:66492848-66492867 | None:intergenic | 35.0% | |
| CAACTAATCCAAGGATATGA+AGG | + | chr4_1:66492972-66492991 | None:intergenic | 35.0% | |
| !! | CTTCATATCCTTGGATTAGT+TGG | - | chr4_1:66492970-66492989 | Msa0565620:intron | 35.0% |
| ! | TACCTTTAAGAACAAGTTGC+AGG | - | chr4_1:66493037-66493056 | Msa0565620:intron | 35.0% |
| ! | AACCTGCAACTTGTTCTTAA+AGG | + | chr4_1:66493042-66493061 | None:intergenic | 35.0% |
| !!! | GTGTGTGTGTGTATTTTGAT+AGG | - | chr4_1:66493597-66493616 | Msa0565620:intron | 35.0% |
| ACAATGTACACATTGGTACT+TGG | + | chr4_1:66493626-66493645 | None:intergenic | 35.0% | |
| TGAAGTTGTGATGGTATAAG+TGG | + | chr4_1:66493877-66493896 | None:intergenic | 35.0% | |
| ATAAATAGAACACAAGGCAG+TGG | + | chr4_1:66493984-66494003 | None:intergenic | 35.0% | |
| ATATTCCCATATTCCCTCTT+CGG | + | chr4_1:66492100-66492119 | None:intergenic | 35.0% | |
| TGGACAATTGACATGTTTCA+AGG | - | chr4_1:66492137-66492156 | Msa0565620:three_prime_UTR | 35.0% | |
| GGACAATTGACATGTTTCAA+GGG | - | chr4_1:66492138-66492157 | Msa0565620:three_prime_UTR | 35.0% | |
| TGTTGTTGTCACAATCACAA+GGG | + | chr4_1:66492172-66492191 | None:intergenic | 35.0% | |
| ! | TTGTTGTTGTCACAATCACA+AGG | + | chr4_1:66492173-66492192 | None:intergenic | 35.0% |
| TTGTGATTGTGACAACAACA+AGG | - | chr4_1:66492172-66492191 | Msa0565620:three_prime_UTR | 35.0% | |
| AACATCAACAACAAAGAAGG+AGG | - | chr4_1:66492220-66492239 | Msa0565620:three_prime_UTR | 35.0% | |
| !!! | AAAGCGTATATTTTGATGGG+TGG | - | chr4_1:66492625-66492644 | Msa0565620:intron | 35.0% |
| !!! | AAGCGTATATTTTGATGGGT+GGG | - | chr4_1:66492626-66492645 | Msa0565620:intron | 35.0% |
| AAGTTGTCAATTGTAGACTG+GGG | + | chr4_1:66492846-66492865 | None:intergenic | 35.0% | |
| CAAAGTTGTCAATTGTAGAC+TGG | + | chr4_1:66492848-66492867 | None:intergenic | 35.0% | |
| CAACTAATCCAAGGATATGA+AGG | + | chr4_1:66492972-66492991 | None:intergenic | 35.0% | |
| !! | CTTCATATCCTTGGATTAGT+TGG | - | chr4_1:66492970-66492989 | Msa0565620:intron | 35.0% |
| ! | TACCTTTAAGAACAAGTTGC+AGG | - | chr4_1:66493037-66493056 | Msa0565620:intron | 35.0% |
| ! | AACCTGCAACTTGTTCTTAA+AGG | + | chr4_1:66493042-66493061 | None:intergenic | 35.0% |
| !!! | GTGTGTGTGTGTATTTTGAT+AGG | - | chr4_1:66493597-66493616 | Msa0565620:intron | 35.0% |
| ACAATGTACACATTGGTACT+TGG | + | chr4_1:66493626-66493645 | None:intergenic | 35.0% | |
| TGAAGTTGTGATGGTATAAG+TGG | + | chr4_1:66493877-66493896 | None:intergenic | 35.0% | |
| ATAAATAGAACACAAGGCAG+TGG | + | chr4_1:66493984-66494003 | None:intergenic | 35.0% | |
| AGAGGGAATATGGGAATATG+CGG | - | chr4_1:66492101-66492120 | Msa0565620:three_prime_UTR | 40.0% | |
| ATTGTGACAACAACAAGGAG+AGG | - | chr4_1:66492177-66492196 | Msa0565620:three_prime_UTR | 40.0% | |
| AAGGAGAGGTGATTGATACT+CGG | - | chr4_1:66492191-66492210 | Msa0565620:three_prime_UTR | 40.0% | |
| GGCAACATCAACAACAAAGA+AGG | - | chr4_1:66492217-66492236 | Msa0565620:three_prime_UTR | 40.0% | |
| TAACACCTTCAGAAGCTGAT+CGG | + | chr4_1:66492403-66492422 | None:intergenic | 40.0% | |
| !! | CTGATAAAAGAAGGTACCAG+CGG | + | chr4_1:66492456-66492475 | None:intergenic | 40.0% |
| ! | ATTGGTTTCCAGAATCTGAG+GGG | + | chr4_1:66492504-66492523 | None:intergenic | 40.0% |
| !! | CATTGGTTTCCAGAATCTGA+GGG | + | chr4_1:66492505-66492524 | None:intergenic | 40.0% |
| AATTCAAGACTTTGCCCGAA+GGG | + | chr4_1:66492920-66492939 | None:intergenic | 40.0% | |
| TAATTCAAGACTTTGCCCGA+AGG | + | chr4_1:66492921-66492940 | None:intergenic | 40.0% | |
| ATCCAAGGATATGAAGGACT+CGG | + | chr4_1:66492966-66492985 | None:intergenic | 40.0% | |
| ATTAGGCTCCAACTAATCCA+AGG | + | chr4_1:66492981-66493000 | None:intergenic | 40.0% | |
| TTGAATTCATATGGCAACCC+TGG | - | chr4_1:66493113-66493132 | Msa0565620:intron | 40.0% | |
| GGTAAAACTTCGTACTCCAA+TGG | - | chr4_1:66493207-66493226 | Msa0565620:intron | 40.0% | |
| GGTGTTAGCTAATCCAATGA+AGG | - | chr4_1:66493336-66493355 | Msa0565620:intron | 40.0% | |
| AGAGGTGACTACATCACTTA+TGG | + | chr4_1:66493383-66493402 | None:intergenic | 40.0% | |
| CACTCAAATCTCCATACAGA+AGG | + | chr4_1:66493680-66493699 | None:intergenic | 40.0% | |
| GAGTGATGAAGAGAAGCAAA+AGG | - | chr4_1:66493695-66493714 | Msa0565620:CDS | 40.0% | |
| ! | ATTCTTGATGACAGTCTCAG+TGG | - | chr4_1:66493735-66493754 | Msa0565620:CDS | 40.0% |
| GCTTACTTATCTGAAAGCTC+AGG | + | chr4_1:66493761-66493780 | None:intergenic | 40.0% | |
| TGTGATGGTATAAGTGGTGT+TGG | + | chr4_1:66493871-66493890 | None:intergenic | 40.0% | |
| CAACACTTGTGAAGTTGTGA+TGG | + | chr4_1:66493886-66493905 | None:intergenic | 40.0% | |
| AGAGGGAATATGGGAATATG+CGG | - | chr4_1:66492101-66492120 | Msa0565620:three_prime_UTR | 40.0% | |
| ATTGTGACAACAACAAGGAG+AGG | - | chr4_1:66492177-66492196 | Msa0565620:three_prime_UTR | 40.0% | |
| AAGGAGAGGTGATTGATACT+CGG | - | chr4_1:66492191-66492210 | Msa0565620:three_prime_UTR | 40.0% | |
| GGCAACATCAACAACAAAGA+AGG | - | chr4_1:66492217-66492236 | Msa0565620:three_prime_UTR | 40.0% | |
| TAACACCTTCAGAAGCTGAT+CGG | + | chr4_1:66492403-66492422 | None:intergenic | 40.0% | |
| !! | CTGATAAAAGAAGGTACCAG+CGG | + | chr4_1:66492456-66492475 | None:intergenic | 40.0% |
| ! | ATTGGTTTCCAGAATCTGAG+GGG | + | chr4_1:66492504-66492523 | None:intergenic | 40.0% |
| !! | CATTGGTTTCCAGAATCTGA+GGG | + | chr4_1:66492505-66492524 | None:intergenic | 40.0% |
| AATTCAAGACTTTGCCCGAA+GGG | + | chr4_1:66492920-66492939 | None:intergenic | 40.0% | |
| TAATTCAAGACTTTGCCCGA+AGG | + | chr4_1:66492921-66492940 | None:intergenic | 40.0% | |
| ATCCAAGGATATGAAGGACT+CGG | + | chr4_1:66492966-66492985 | None:intergenic | 40.0% | |
| ATTAGGCTCCAACTAATCCA+AGG | + | chr4_1:66492981-66493000 | None:intergenic | 40.0% | |
| TTGAATTCATATGGCAACCC+TGG | - | chr4_1:66493113-66493132 | Msa0565620:intron | 40.0% | |
| GGTAAAACTTCGTACTCCAA+TGG | - | chr4_1:66493207-66493226 | Msa0565620:intron | 40.0% | |
| GGTGTTAGCTAATCCAATGA+AGG | - | chr4_1:66493336-66493355 | Msa0565620:intron | 40.0% | |
| AGAGGTGACTACATCACTTA+TGG | + | chr4_1:66493383-66493402 | None:intergenic | 40.0% | |
| CACTCAAATCTCCATACAGA+AGG | + | chr4_1:66493680-66493699 | None:intergenic | 40.0% | |
| GAGTGATGAAGAGAAGCAAA+AGG | - | chr4_1:66493695-66493714 | Msa0565620:CDS | 40.0% | |
| ! | ATTCTTGATGACAGTCTCAG+TGG | - | chr4_1:66493735-66493754 | Msa0565620:CDS | 40.0% |
| GCTTACTTATCTGAAAGCTC+AGG | + | chr4_1:66493761-66493780 | None:intergenic | 40.0% | |
| TGTGATGGTATAAGTGGTGT+TGG | + | chr4_1:66493871-66493890 | None:intergenic | 40.0% | |
| CAACACTTGTGAAGTTGTGA+TGG | + | chr4_1:66493886-66493905 | None:intergenic | 40.0% | |
| TGAAGACCGAAGAGGGAATA+TGG | - | chr4_1:66492091-66492110 | Msa0565620:three_prime_UTR | 45.0% | |
| GAAGACCGAAGAGGGAATAT+GGG | - | chr4_1:66492092-66492111 | Msa0565620:three_prime_UTR | 45.0% | |
| GAGGTGATTGATACTCGGAA+TGG | - | chr4_1:66492196-66492215 | Msa0565620:three_prime_UTR | 45.0% | |
| ! | AGAAGGAGGTTTATTCGGTG+TGG | - | chr4_1:66492234-66492253 | Msa0565620:three_prime_UTR | 45.0% |
| !! | GAAGGAGGTTTATTCGGTGT+GGG | - | chr4_1:66492235-66492254 | Msa0565620:three_prime_UTR | 45.0% |
| TAACTCTATTGCTCCCACGA+CGG | + | chr4_1:66492354-66492373 | None:intergenic | 45.0% | |
| TTTGTTGAGTGCATCGTCTG+GGG | + | chr4_1:66492378-66492397 | None:intergenic | 45.0% | |
| ! | GTTTGTTGAGTGCATCGTCT+GGG | + | chr4_1:66492379-66492398 | None:intergenic | 45.0% |
| !! | AGTTTGTTGAGTGCATCGTC+TGG | + | chr4_1:66492380-66492399 | None:intergenic | 45.0% |
| AAACTCCGATCAGCTTCTGA+AGG | - | chr4_1:66492395-66492414 | Msa0565620:CDS | 45.0% | |
| !! | GCATTGGTTTCCAGAATCTG+AGG | + | chr4_1:66492506-66492525 | None:intergenic | 45.0% |
| !!! | CGTATATTTTGATGGGTGGG+TGG | - | chr4_1:66492629-66492648 | Msa0565620:intron | 45.0% |
| ! | TCGTCAAATAGGTGCTACAG+TGG | - | chr4_1:66492782-66492801 | Msa0565620:intron | 45.0% |
| ! | GCAAAGAGTTTGGTTCCCTT+CGG | - | chr4_1:66492902-66492921 | Msa0565620:intron | 45.0% |
| ! | CAAAGAGTTTGGTTCCCTTC+GGG | - | chr4_1:66492903-66492922 | Msa0565620:intron | 45.0% |
| TTGCAGGTTCAAGCGCAATA+TGG | - | chr4_1:66493053-66493072 | Msa0565620:intron | 45.0% | |
| AAGTGACAAGTGTTCGCCAT+TGG | + | chr4_1:66493226-66493245 | None:intergenic | 45.0% | |
| ! | CGAACACTTGTCACTTCACT+TGG | - | chr4_1:66493230-66493249 | Msa0565620:intron | 45.0% |
| TTTCCGCGTCATGTCATCTA+TGG | + | chr4_1:66494100-66494119 | None:intergenic | 45.0% | |
| TGAAGACCGAAGAGGGAATA+TGG | - | chr4_1:66492091-66492110 | Msa0565620:three_prime_UTR | 45.0% | |
| GAAGACCGAAGAGGGAATAT+GGG | - | chr4_1:66492092-66492111 | Msa0565620:three_prime_UTR | 45.0% | |
| GAGGTGATTGATACTCGGAA+TGG | - | chr4_1:66492196-66492215 | Msa0565620:three_prime_UTR | 45.0% | |
| ! | AGAAGGAGGTTTATTCGGTG+TGG | - | chr4_1:66492234-66492253 | Msa0565620:three_prime_UTR | 45.0% |
| !! | GAAGGAGGTTTATTCGGTGT+GGG | - | chr4_1:66492235-66492254 | Msa0565620:three_prime_UTR | 45.0% |
| TAACTCTATTGCTCCCACGA+CGG | + | chr4_1:66492354-66492373 | None:intergenic | 45.0% | |
| TTTGTTGAGTGCATCGTCTG+GGG | + | chr4_1:66492378-66492397 | None:intergenic | 45.0% | |
| ! | GTTTGTTGAGTGCATCGTCT+GGG | + | chr4_1:66492379-66492398 | None:intergenic | 45.0% |
| !! | AGTTTGTTGAGTGCATCGTC+TGG | + | chr4_1:66492380-66492399 | None:intergenic | 45.0% |
| AAACTCCGATCAGCTTCTGA+AGG | - | chr4_1:66492395-66492414 | Msa0565620:CDS | 45.0% | |
| !! | GCATTGGTTTCCAGAATCTG+AGG | + | chr4_1:66492506-66492525 | None:intergenic | 45.0% |
| !!! | CGTATATTTTGATGGGTGGG+TGG | - | chr4_1:66492629-66492648 | Msa0565620:intron | 45.0% |
| ! | TCGTCAAATAGGTGCTACAG+TGG | - | chr4_1:66492782-66492801 | Msa0565620:intron | 45.0% |
| ! | GCAAAGAGTTTGGTTCCCTT+CGG | - | chr4_1:66492902-66492921 | Msa0565620:intron | 45.0% |
| ! | CAAAGAGTTTGGTTCCCTTC+GGG | - | chr4_1:66492903-66492922 | Msa0565620:intron | 45.0% |
| TTGCAGGTTCAAGCGCAATA+TGG | - | chr4_1:66493053-66493072 | Msa0565620:intron | 45.0% | |
| AAGTGACAAGTGTTCGCCAT+TGG | + | chr4_1:66493226-66493245 | None:intergenic | 45.0% | |
| ! | CGAACACTTGTCACTTCACT+TGG | - | chr4_1:66493230-66493249 | Msa0565620:intron | 45.0% |
| TTTCCGCGTCATGTCATCTA+TGG | + | chr4_1:66494100-66494119 | None:intergenic | 45.0% | |
| ATGGGAATATGCGGAGCATG+TGG | - | chr4_1:66492110-66492129 | Msa0565620:three_prime_UTR | 50.0% | |
| GTTTCCAGAATCTGAGGGGT+GGG | + | chr4_1:66492500-66492519 | None:intergenic | 50.0% | |
| TGCCGAGTCCTTCATATCCT+TGG | - | chr4_1:66492961-66492980 | Msa0565620:intron | 50.0% | |
| ! | AGTCACCTCTGAAGACTCTG+CGG | - | chr4_1:66493393-66493412 | Msa0565620:intron | 50.0% |
| ACACACACACACACAGACAC+TGG | + | chr4_1:66493589-66493608 | None:intergenic | 50.0% | |
| !! | GTGGTGTTGGCAAGCTAGTT+TGG | + | chr4_1:66493858-66493877 | None:intergenic | 50.0% |
| GTGCCATAGATGACATGACG+CGG | - | chr4_1:66494094-66494113 | Msa0565620:five_prime_UTR | 50.0% | |
| ATGGGAATATGCGGAGCATG+TGG | - | chr4_1:66492110-66492129 | Msa0565620:three_prime_UTR | 50.0% | |
| GTTTCCAGAATCTGAGGGGT+GGG | + | chr4_1:66492500-66492519 | None:intergenic | 50.0% | |
| TGCCGAGTCCTTCATATCCT+TGG | - | chr4_1:66492961-66492980 | Msa0565620:intron | 50.0% | |
| ! | AGTCACCTCTGAAGACTCTG+CGG | - | chr4_1:66493393-66493412 | Msa0565620:intron | 50.0% |
| ACACACACACACACAGACAC+TGG | + | chr4_1:66493589-66493608 | None:intergenic | 50.0% | |
| !! | GTGGTGTTGGCAAGCTAGTT+TGG | + | chr4_1:66493858-66493877 | None:intergenic | 50.0% |
| GTGCCATAGATGACATGACG+CGG | - | chr4_1:66494094-66494113 | Msa0565620:five_prime_UTR | 50.0% | |
| TGGGTGAGTGAAGACCGAAG+AGG | - | chr4_1:66492083-66492102 | Msa0565620:three_prime_UTR | 55.0% | |
| GGGTGAGTGAAGACCGAAGA+GGG | - | chr4_1:66492084-66492103 | Msa0565620:three_prime_UTR | 55.0% | |
| TATGCGGAGCATGTGGCACA+TGG | - | chr4_1:66492117-66492136 | Msa0565620:three_prime_UTR | 55.0% | |
| TCCACCGAATTCGGATCGGA+GGG | + | chr4_1:66492309-66492328 | None:intergenic | 55.0% | |
| GAACTGGGGTCCACCGAATT+CGG | + | chr4_1:66492318-66492337 | None:intergenic | 55.0% | |
| GTCATGTGGGGTTCGAACTG+GGG | + | chr4_1:66492332-66492351 | None:intergenic | 55.0% | |
| GGTCATGTGGGGTTCGAACT+GGG | + | chr4_1:66492333-66492352 | None:intergenic | 55.0% | |
| CAACACGGTCAACGGTGACT+TGG | + | chr4_1:66492433-66492452 | None:intergenic | 55.0% | |
| !! | AGAAGGTACCAGCGGCAACA+CGG | + | chr4_1:66492448-66492467 | None:intergenic | 55.0% |
| GAATCTGAGGGGTGGGATGA+AGG | + | chr4_1:66492493-66492512 | None:intergenic | 55.0% | |
| TCATCCCACCCCTCAGATTC+TGG | - | chr4_1:66492493-66492512 | Msa0565620:CDS | 55.0% | |
| GGTTTCCAGAATCTGAGGGG+TGG | + | chr4_1:66492501-66492520 | None:intergenic | 55.0% | |
| ATGGGTGCAGCAGTGTGCAT+TGG | + | chr4_1:66492522-66492541 | None:intergenic | 55.0% | |
| GCACACTGCTGCACCCATTT+CGG | - | chr4_1:66492524-66492543 | Msa0565620:intron | 55.0% | |
| ACAGTGGCGCTATTGCGTAG+TGG | - | chr4_1:66492798-66492817 | Msa0565620:intron | 55.0% | |
| CAAGTCCGCAGAGTCTTCAG+AGG | + | chr4_1:66493401-66493420 | None:intergenic | 55.0% | |
| ! | CTCTGAAGACTCTGCGGACT+TGG | - | chr4_1:66493399-66493418 | Msa0565620:intron | 55.0% |
| CCATACAGAAGGCTCACGTG+TGG | + | chr4_1:66493669-66493688 | None:intergenic | 55.0% | |
| CCACACGTGAGCCTTCTGTA+TGG | - | chr4_1:66493666-66493685 | Msa0565620:CDS | 55.0% | |
| TGGGTGAGTGAAGACCGAAG+AGG | - | chr4_1:66492083-66492102 | Msa0565620:three_prime_UTR | 55.0% | |
| GGGTGAGTGAAGACCGAAGA+GGG | - | chr4_1:66492084-66492103 | Msa0565620:three_prime_UTR | 55.0% | |
| TATGCGGAGCATGTGGCACA+TGG | - | chr4_1:66492117-66492136 | Msa0565620:three_prime_UTR | 55.0% | |
| TCCACCGAATTCGGATCGGA+GGG | + | chr4_1:66492309-66492328 | None:intergenic | 55.0% | |
| GAACTGGGGTCCACCGAATT+CGG | + | chr4_1:66492318-66492337 | None:intergenic | 55.0% | |
| GTCATGTGGGGTTCGAACTG+GGG | + | chr4_1:66492332-66492351 | None:intergenic | 55.0% | |
| GGTCATGTGGGGTTCGAACT+GGG | + | chr4_1:66492333-66492352 | None:intergenic | 55.0% | |
| CAACACGGTCAACGGTGACT+TGG | + | chr4_1:66492433-66492452 | None:intergenic | 55.0% | |
| !! | AGAAGGTACCAGCGGCAACA+CGG | + | chr4_1:66492448-66492467 | None:intergenic | 55.0% |
| GAATCTGAGGGGTGGGATGA+AGG | + | chr4_1:66492493-66492512 | None:intergenic | 55.0% | |
| TCATCCCACCCCTCAGATTC+TGG | - | chr4_1:66492493-66492512 | Msa0565620:CDS | 55.0% | |
| GGTTTCCAGAATCTGAGGGG+TGG | + | chr4_1:66492501-66492520 | None:intergenic | 55.0% | |
| ATGGGTGCAGCAGTGTGCAT+TGG | + | chr4_1:66492522-66492541 | None:intergenic | 55.0% | |
| GCACACTGCTGCACCCATTT+CGG | - | chr4_1:66492524-66492543 | Msa0565620:intron | 55.0% | |
| ACAGTGGCGCTATTGCGTAG+TGG | - | chr4_1:66492798-66492817 | Msa0565620:intron | 55.0% | |
| CAAGTCCGCAGAGTCTTCAG+AGG | + | chr4_1:66493401-66493420 | None:intergenic | 55.0% | |
| ! | CTCTGAAGACTCTGCGGACT+TGG | - | chr4_1:66493399-66493418 | Msa0565620:intron | 55.0% |
| CCATACAGAAGGCTCACGTG+TGG | + | chr4_1:66493669-66493688 | None:intergenic | 55.0% | |
| CCACACGTGAGCCTTCTGTA+TGG | - | chr4_1:66493666-66493685 | Msa0565620:CDS | 55.0% | |
| GGTCGCATACGTCTTCCGGT+GGG | + | chr4_1:66492265-66492284 | None:intergenic | 60.0% | |
| AGGCGGTCGCATACGTCTTC+CGG | + | chr4_1:66492269-66492288 | None:intergenic | 60.0% | |
| ! | CGGTCATGAGCTTGGTGAGG+CGG | + | chr4_1:66492286-66492305 | None:intergenic | 60.0% |
| ACCGCCCTCCGATCCGAATT+CGG | - | chr4_1:66492302-66492321 | Msa0565620:three_prime_UTR | 60.0% | |
| ACCGAATTCGGATCGGAGGG+CGG | + | chr4_1:66492306-66492325 | None:intergenic | 60.0% | |
| GTCCACCGAATTCGGATCGG+AGG | + | chr4_1:66492310-66492329 | None:intergenic | 60.0% | |
| GGGGTCCACCGAATTCGGAT+CGG | + | chr4_1:66492313-66492332 | None:intergenic | 60.0% | |
| CGGTCATGTGGGGTTCGAAC+TGG | + | chr4_1:66492334-66492353 | None:intergenic | 60.0% | |
| GAACCCCACATGACCGTCGT+GGG | - | chr4_1:66492338-66492357 | Msa0565620:CDS | 60.0% | |
| TGCTCCCACGACGGTCATGT+GGG | + | chr4_1:66492345-66492364 | None:intergenic | 60.0% | |
| TTGCTCCCACGACGGTCATG+TGG | + | chr4_1:66492346-66492365 | None:intergenic | 60.0% | |
| ACCAGCGGCAACACGGTCAA+CGG | + | chr4_1:66492441-66492460 | None:intergenic | 60.0% | |
| TCTGAGGGGTGGGATGAAGG+AGG | + | chr4_1:66492490-66492509 | None:intergenic | 60.0% | |
| GGTCGCATACGTCTTCCGGT+GGG | + | chr4_1:66492265-66492284 | None:intergenic | 60.0% | |
| AGGCGGTCGCATACGTCTTC+CGG | + | chr4_1:66492269-66492288 | None:intergenic | 60.0% | |
| ! | CGGTCATGAGCTTGGTGAGG+CGG | + | chr4_1:66492286-66492305 | None:intergenic | 60.0% |
| ACCGCCCTCCGATCCGAATT+CGG | - | chr4_1:66492302-66492321 | Msa0565620:three_prime_UTR | 60.0% | |
| ACCGAATTCGGATCGGAGGG+CGG | + | chr4_1:66492306-66492325 | None:intergenic | 60.0% | |
| GTCCACCGAATTCGGATCGG+AGG | + | chr4_1:66492310-66492329 | None:intergenic | 60.0% | |
| GGGGTCCACCGAATTCGGAT+CGG | + | chr4_1:66492313-66492332 | None:intergenic | 60.0% | |
| CGGTCATGTGGGGTTCGAAC+TGG | + | chr4_1:66492334-66492353 | None:intergenic | 60.0% | |
| GAACCCCACATGACCGTCGT+GGG | - | chr4_1:66492338-66492357 | Msa0565620:CDS | 60.0% | |
| TGCTCCCACGACGGTCATGT+GGG | + | chr4_1:66492345-66492364 | None:intergenic | 60.0% | |
| TTGCTCCCACGACGGTCATG+TGG | + | chr4_1:66492346-66492365 | None:intergenic | 60.0% | |
| ACCAGCGGCAACACGGTCAA+CGG | + | chr4_1:66492441-66492460 | None:intergenic | 60.0% | |
| TCTGAGGGGTGGGATGAAGG+AGG | + | chr4_1:66492490-66492509 | None:intergenic | 60.0% | |
| ! | TTCGGTGTGGGCGATCCCAC+CGG | - | chr4_1:66492247-66492266 | Msa0565620:three_prime_UTR | 65.0% |
| CGGTCGCATACGTCTTCCGG+TGG | + | chr4_1:66492266-66492285 | None:intergenic | 65.0% | |
| ! | GGGCGGTCATGAGCTTGGTG+AGG | + | chr4_1:66492289-66492308 | None:intergenic | 65.0% |
| TCGGAGGGCGGTCATGAGCT+TGG | + | chr4_1:66492294-66492313 | None:intergenic | 65.0% | |
| GCCCTCCGATCCGAATTCGG+TGG | - | chr4_1:66492305-66492324 | Msa0565620:three_prime_UTR | 65.0% | |
| CGAACCCCACATGACCGTCG+TGG | - | chr4_1:66492337-66492356 | Msa0565620:CDS | 65.0% | |
| GCTCCCACGACGGTCATGTG+GGG | + | chr4_1:66492344-66492363 | None:intergenic | 65.0% | |
| ACCGTTGACCGTGTTGCCGC+TGG | - | chr4_1:66492437-66492456 | Msa0565620:CDS | 65.0% | |
| ! | TTCGGTGTGGGCGATCCCAC+CGG | - | chr4_1:66492247-66492266 | Msa0565620:three_prime_UTR | 65.0% |
| CGGTCGCATACGTCTTCCGG+TGG | + | chr4_1:66492266-66492285 | None:intergenic | 65.0% | |
| ! | GGGCGGTCATGAGCTTGGTG+AGG | + | chr4_1:66492289-66492308 | None:intergenic | 65.0% |
| TCGGAGGGCGGTCATGAGCT+TGG | + | chr4_1:66492294-66492313 | None:intergenic | 65.0% | |
| GCCCTCCGATCCGAATTCGG+TGG | - | chr4_1:66492305-66492324 | Msa0565620:three_prime_UTR | 65.0% | |
| CGAACCCCACATGACCGTCG+TGG | - | chr4_1:66492337-66492356 | Msa0565620:CDS | 65.0% | |
| GCTCCCACGACGGTCATGTG+GGG | + | chr4_1:66492344-66492363 | None:intergenic | 65.0% | |
| ACCGTTGACCGTGTTGCCGC+TGG | - | chr4_1:66492437-66492456 | Msa0565620:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 66492060 | 66494134 | 66492060 | ID=Msa0565620;Name=Msa0565620 |
| chr4_1 | mRNA | 66492060 | 66494134 | 66492060 | ID=Msa0565620-mRNA-1;Parent=Msa0565620;Name=Msa0565620-mRNA-1;_AED=0.01;_eAED=0.01;_QI=155|1|1|1|1|1|2|271|184 |
| chr4_1 | exon | 66492060 | 66492536 | 66492060 | ID=Msa0565620-mRNA-1:exon:21619;Parent=Msa0565620-mRNA-1 |
| chr4_1 | exon | 66493631 | 66494134 | 66493631 | ID=Msa0565620-mRNA-1:exon:21618;Parent=Msa0565620-mRNA-1 |
| chr4_1 | five_prime_UTR | 66493980 | 66494134 | 66493980 | ID=Msa0565620-mRNA-1:five_prime_utr;Parent=Msa0565620-mRNA-1 |
| chr4_1 | CDS | 66493631 | 66493979 | 66493631 | ID=Msa0565620-mRNA-1:cds;Parent=Msa0565620-mRNA-1 |
| chr4_1 | CDS | 66492331 | 66492536 | 66492331 | ID=Msa0565620-mRNA-1:cds;Parent=Msa0565620-mRNA-1 |
| chr4_1 | three_prime_UTR | 66492060 | 66492330 | 66492060 | ID=Msa0565620-mRNA-1:three_prime_utr;Parent=Msa0565620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
