AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1190560


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1190560 MtrunA17_Chr8g0359941 96.234 717 8 1 1 717 1 698 0.0 1417
Msa1190560 MtrunA17_Chr2g0317791 78.887 701 128 4 15 714 4 685 0.0 1152
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1190560 AT3G15380.1 74.048 709 166 3 1 708 1 692 0.0 1105

Find 177 sgRNAs with CRISPR-Local

Find 466 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCCTTACATTAATGTATT+TGG 0.094015 8_1:-33627907 Msa1190560:CDS
CTGCTGATGATTCTCTTAAA+TGG 0.121515 8_1:-33629468 Msa1190560:CDS
GGTCTGTTGCTTCTTATTAC+TGG 0.145311 8_1:-33626990 Msa1190560:CDS
CAATGAAACTAGTATAATTT+TGG 0.183726 8_1:-33623887 Msa1190560:exon
TTCACCTATTTGGGTGCTAT+TGG 0.189622 8_1:-33627056 Msa1190560:CDS
GTTATATTTCCTAGTGTAAA+TGG 0.218227 8_1:-33629313 Msa1190560:intron
CCTGAGTCAGACAATTTAAT+TGG 0.224077 8_1:-33627350 Msa1190560:intron
TATATATCATTGCTGGTAAA+AGG 0.236333 8_1:-33623774 Msa1190560:three_prime_UTR
ACAATGTTCTTCTACATAAA+AGG 0.242040 8_1:-33628678 Msa1190560:intron
ATTTACCTCAGGCTTACTTA+TGG 0.247768 8_1:-33629661 Msa1190560:intron
TGCTCCTCAACAGTGGTTGC+TGG 0.264780 8_1:-33627012 Msa1190560:CDS
ATGATTGTTAATTCCAGTTT+TGG 0.287468 8_1:-33630466 Msa1190560:CDS
ATCCTTACATTAATGTATTT+GGG 0.295980 8_1:-33627906 Msa1190560:CDS
CTTGGTGTTCTTCAGAATCT+TGG 0.299971 8_1:+33623990 None:intergenic
TCTGGCCAGAGCTGAATAAA+TGG 0.306681 8_1:+33627202 None:intergenic
TCACCTATTTGGGTGCTATT+GGG 0.318550 8_1:-33627055 Msa1190560:CDS
ATGAATAACATTCTAAAGAT+TGG 0.318670 8_1:-33626141 Msa1190560:CDS
TTTACCTCAGGCTTACTTAT+GGG 0.330404 8_1:-33629660 Msa1190560:intron
AAACTCCTCTCTTCAACTTC+AGG 0.331107 8_1:-33629350 Msa1190560:CDS
TTGAAAATGAGAGGTCCTTT+AGG 0.333028 8_1:-33630613 Msa1190560:exon
TGCTTGCAGATTGCTATAAC+TGG 0.335742 8_1:-33626207 Msa1190560:intron
TCCTTGGTTAAAACCAAAAC+TGG 0.339259 8_1:+33630453 None:intergenic
AGAGAGGAGTTTCTCATATC+AGG 0.340715 8_1:+33629361 None:intergenic
GTCTGTTGCTTCTTATTACT+GGG 0.340759 8_1:-33626989 Msa1190560:CDS
TGGTAAAAGGTGGCATCGTT+TGG 0.342645 8_1:-33623761 Msa1190560:three_prime_UTR
TATTGTACGGCGCATCCTTA+TGG 0.348010 8_1:-33627703 Msa1190560:CDS
GTGAATTGGAGCTCAGATAT+TGG 0.360519 8_1:-33629585 Msa1190560:CDS
AGAGAATCATCAGCAGGAAT+AGG 0.366569 8_1:+33629475 None:intergenic
AGAAGATGAAGAAGATGAAA+GGG 0.373283 8_1:+33630690 None:intergenic
CTAGTTTCATTGTGATCCTT+GGG 0.374805 8_1:+33623898 None:intergenic
ATTCATTACACACCACATAT+TGG 0.376578 8_1:-33627093 Msa1190560:CDS
AGGAGATATCCGTCTTTCTA+TGG 0.376800 8_1:-33629428 Msa1190560:CDS
ACTAGTTTCATTGTGATCCT+TGG 0.378958 8_1:+33623897 None:intergenic
TAAACAAGACATACCACAAC+AGG 0.384704 8_1:+33625979 None:intergenic
TTCTCGATCAGCTGTCTTGA+AGG 0.389221 8_1:-33629085 Msa1190560:intron
GCATTGTAATGCAGGTATGC+TGG 0.389620 8_1:-33624090 Msa1190560:intron
TTTACCTAAGTGGGTTTCCT+TGG 0.391173 8_1:+33630437 None:intergenic
TGCTGATGATTCTCTTAAAT+GGG 0.394676 8_1:-33629467 Msa1190560:CDS
TGCTTCAGTGATGTGTTTGA+TGG 0.395457 8_1:+33629180 None:intergenic
CCAGTCTGATAAACTTGGTT+AGG 0.395828 8_1:+33629556 None:intergenic
AGGATAGCATATGGGATGAT+TGG 0.402260 8_1:+33627261 None:intergenic
TGGCCCAATAGCACCCAAAT+AGG 0.408432 8_1:+33627052 None:intergenic
TCCGTCTTTCTATGGAAGAT+TGG 0.409237 8_1:-33629420 Msa1190560:CDS
CAGGTTGCTGCAAAAGTAAT+AGG 0.411793 8_1:-33627309 Msa1190560:CDS
TAAGTCTATTCGTCTCGTTT+TGG 0.414465 8_1:+33623921 None:intergenic
GATGCTATTTCTCCCATCAT+TGG 0.415661 8_1:-33627937 Msa1190560:CDS
ACATCCTGGCCTTGGTGAAT+TGG 0.416974 8_1:-33629599 Msa1190560:CDS
TGCTCGTAGCATATGCTTGT+CGG 0.420426 8_1:-33629503 Msa1190560:CDS
ATATGTTTATATATCATTGC+TGG 0.421361 8_1:-33623781 Msa1190560:three_prime_UTR
GACACACACAAGTACAGTTC+TGG 0.429035 8_1:-33626030 Msa1190560:CDS
TGGCCTGTGCTGATTGTTTG+TGG 0.433385 8_1:-33628813 Msa1190560:CDS
CTATCCAGCTGCCATGCATA+TGG 0.435318 8_1:+33626426 None:intergenic
GAGAATCATCAGCAGGAATA+GGG 0.439985 8_1:+33629476 None:intergenic
AGGATCATGCTCACCAATGA+TGG 0.442969 8_1:+33627924 None:intergenic
GCTCTCCATTTATTCAGCTC+TGG 0.443239 8_1:-33627207 Msa1190560:CDS
TTGATGGACGAGCAATAAAC+TGG 0.448247 8_1:+33629196 None:intergenic
GTATGATCTTGTGGCAAAAC+GGG 0.450111 8_1:-33627145 Msa1190560:CDS
GAAAGACGGATATCTCCTTC+AGG 0.450186 8_1:+33629433 None:intergenic
GGTAAAAGGTGGCATCGTTT+GGG 0.451565 8_1:-33623760 Msa1190560:three_prime_UTR
TGAATAACATTCTAAAGATT+GGG 0.453993 8_1:-33626140 Msa1190560:CDS
GCTCCTCAACAGTGGTTGCT+GGG 0.454193 8_1:-33627011 Msa1190560:CDS
CCTCAGGCTTACTTATGGGC+TGG 0.458743 8_1:-33629656 Msa1190560:intron
ATGCAGGTATGCTGGGCTCT+TGG 0.459555 8_1:-33624082 Msa1190560:intron
TTATCAATCCATTTGTCAAA+AGG 0.461992 8_1:+33623734 None:intergenic
TGATTTGGCTGATGATGATT+CGG 0.463430 8_1:-33628764 Msa1190560:CDS
CTCCCAAATACATTAATGTA+AGG 0.464873 8_1:+33627904 None:intergenic
GGTCCTTTAGGTGCAGTGAT+AGG 0.466796 8_1:-33630601 Msa1190560:CDS
TGAGAAAACATTGAGAAGAT+TGG 0.466973 8_1:+33626390 None:intergenic
AAGAACGGAACAGAACTATA+TGG 0.468231 8_1:+33623817 None:intergenic
TCACTTCAATTGCTATTGTA+CGG 0.472187 8_1:-33627716 Msa1190560:CDS
CTGTGCTGATTGTTTGTGGA+GGG 0.474787 8_1:-33628809 Msa1190560:CDS
AACACGGCAAGGATAGCATA+TGG 0.475523 8_1:+33627252 None:intergenic
AAGTGATGGAGTTACTCAAA+TGG 0.475572 8_1:-33630566 Msa1190560:CDS
TTTACACTAGGAAATATAAC+AGG 0.477912 8_1:+33629316 None:intergenic
AACTCCTCTCTTCAACTTCA+GGG 0.478553 8_1:-33629349 Msa1190560:CDS
TGCAGTCATTCTGAACAATC+TGG 0.478612 8_1:+33627184 None:intergenic
CGTATGATCTTGTGGCAAAA+CGG 0.482113 8_1:-33627146 Msa1190560:CDS
TAGAAGATGAAGAAGATGAA+AGG 0.485444 8_1:+33630689 None:intergenic
ATCTCCACTCTTCCCTGTTG+TGG 0.489332 8_1:-33625992 Msa1190560:intron
AGTCTCGGATCTGTGGCTCT+TGG 0.489841 8_1:-33626524 Msa1190560:CDS
CAAACACATCACTGAAGCAT+TGG 0.492796 8_1:-33629176 Msa1190560:CDS
CATTGTAATGCAGGTATGCT+GGG 0.493936 8_1:-33624089 Msa1190560:intron
CATATGCATGGCAGCTGGAT+AGG 0.495066 8_1:-33626425 Msa1190560:CDS
CCTAACCAAGTTTATCAGAC+TGG 0.497455 8_1:-33629556 Msa1190560:CDS
TGTCATTTGTAGAATCAATC+CGG 0.498336 8_1:-33626490 Msa1190560:CDS
TCAATCCAGTCTGATAAACT+TGG 0.499093 8_1:+33629551 None:intergenic
AGTTTATCAGACTGGATTGA+AGG 0.499374 8_1:-33629548 Msa1190560:CDS
CCAGCCATATGCATGGCAGC+TGG 0.499610 8_1:-33626430 Msa1190560:CDS
GAAGAGATTCAAGCAGAAAC+CGG 0.501809 8_1:+33626471 None:intergenic
TACCGAGAGTTTCCATGAGA+AGG 0.501830 8_1:+33623945 None:intergenic
ACCGAGAGTTTCCATGAGAA+GGG 0.504178 8_1:+33623946 None:intergenic
AGTTTCTCATATCAGGTGTA+AGG 0.506174 8_1:+33629368 None:intergenic
CCAGCTGCCATGCATATGGC+TGG 0.509531 8_1:+33626430 None:intergenic
AAATCGAAATGCTTATATCA+TGG 0.509618 8_1:-33626339 Msa1190560:intron
ACTGAAGCATTGGGAGCAGA+TGG 0.512261 8_1:-33629166 Msa1190560:CDS
AAACACATCACTGAAGCATT+GGG 0.512838 8_1:-33629175 Msa1190560:CDS
AGTGATGGAGTTACTCAAAT+GGG 0.513459 8_1:-33630565 Msa1190560:CDS
AGGCTTATGCGTTACAGTCT+CGG 0.513581 8_1:-33626539 Msa1190560:CDS
CTTCCTATCACTGCACCTAA+AGG 0.514840 8_1:+33630598 None:intergenic
GTGGAGATGAGGTCTTGTTA+TGG 0.519430 8_1:+33626007 None:intergenic
AAGCATGCACATCCTGGCCT+TGG 0.522945 8_1:-33629607 Msa1190560:CDS
GTATGCCCCACCCCTTCTCA+TGG 0.523297 8_1:-33623957 Msa1190560:CDS
GCTTCTTATTACTGGGCCCA+CGG 0.531465 8_1:-33626982 Msa1190560:CDS
AACTCTATTCTTTGCAGTGG+TGG 0.533282 8_1:-33624047 Msa1190560:CDS
AGTATGGAAATTCCAATATG+TGG 0.533807 8_1:+33627081 None:intergenic
AGCTCCAATTCACCAAGGCC+AGG 0.534263 8_1:+33629595 None:intergenic
GTATAATTCTAACTGTCCAC+AGG 0.536789 8_1:-33627328 Msa1190560:CDS
TGAGGACAGATGTTGCCATA+AGG 0.541698 8_1:+33627688 None:intergenic
TGCAACTCTATTCTTTGCAG+TGG 0.547698 8_1:-33624050 Msa1190560:CDS
TAATGCTATTATTGTGAACC+AGG 0.552831 8_1:+33623632 None:intergenic
TTACATTAATGTATTTGGGA+GGG 0.560226 8_1:-33627902 Msa1190560:intron
TTAACCAAGGAAACCCACTT+AGG 0.560395 8_1:-33630441 Msa1190560:intron
AGAGTTTCCATGAGAAGGGG+TGG 0.563587 8_1:+33623950 None:intergenic
GGTGACAAGCATGCACATCC+TGG 0.565304 8_1:-33629613 Msa1190560:CDS
CAGAGGTACATGGCTGACAT+AGG 0.565723 8_1:-33628843 Msa1190560:CDS
AGTTTCCATGAGAAGGGGTG+GGG 0.567441 8_1:+33623952 None:intergenic
GGAAATATAACAGGATAACA+TGG 0.570296 8_1:+33629325 None:intergenic
CATTTAAGAGAATCATCAGC+AGG 0.572371 8_1:+33629469 None:intergenic
TTTGTATTTACAGAGGTACA+TGG 0.574612 8_1:-33628853 Msa1190560:intron
CTTACATTAATGTATTTGGG+AGG 0.574648 8_1:-33627903 Msa1190560:CDS
TGTACTTATGACCGTTGTCA+TGG 0.578122 8_1:-33627751 Msa1190560:CDS
AATGGATTGATAACTTTGTG+AGG 0.579154 8_1:-33623724 Msa1190560:three_prime_UTR
ACACGGCAAGGATAGCATAT+GGG 0.579898 8_1:+33627253 None:intergenic
GGATCATGCTCACCAATGAT+GGG 0.580422 8_1:+33627925 None:intergenic
CCCCTTCTCATGGAAACTCT+CGG 0.580443 8_1:-33623947 Msa1190560:CDS
GAGTTTCCATGAGAAGGGGT+GGG 0.584130 8_1:+33623951 None:intergenic
AATAGCAATTGAAGTGAGAA+CGG 0.585718 8_1:+33627722 None:intergenic
GTTTACTCACCATTTACACT+AGG 0.587227 8_1:+33629304 None:intergenic
CTGCTGCACGTATGATCTTG+TGG 0.587382 8_1:-33627154 Msa1190560:CDS
CATACCACAACAGGGAAGAG+TGG 0.590998 8_1:+33625988 None:intergenic
GCGTTACAGTCTCGGATCTG+TGG 0.591062 8_1:-33626531 Msa1190560:CDS
ATTTACAAGCGAAGTAAGAA+CGG 0.591473 8_1:+33623802 None:intergenic
GAAGATGAAGAAGATGAAAG+GGG 0.592928 8_1:+33630691 None:intergenic
TATGGCAACATCTGTCCTCA+AGG 0.593789 8_1:-33627685 Msa1190560:CDS
GTGAACTGTGACCGTTGTTG+TGG 0.595742 8_1:-33627123 Msa1190560:CDS
AAATCATGTAAAACACGGCA+AGG 0.596632 8_1:+33627241 None:intergenic
CCTGTGCTGATTGTTTGTGG+AGG 0.596673 8_1:-33628810 Msa1190560:CDS
CTGAAGCATTGGGAGCAGAT+GGG 0.598629 8_1:-33629165 Msa1190560:CDS
ATTGGGCGTCTTAATGTGAT+CGG 0.598662 8_1:-33626123 Msa1190560:CDS
GGAGTTACTCAAATGGGTGG+TGG 0.599196 8_1:-33630559 Msa1190560:CDS
GGAAGCTATACATCAAGTGA+TGG 0.601826 8_1:-33630580 Msa1190560:CDS
CGTAGCGTGCTCCTCAACAG+TGG 0.603735 8_1:-33627019 Msa1190560:CDS
AGACCCAGCAACCACTGTTG+AGG 0.606817 8_1:+33627008 None:intergenic
CCGAGAGTTTCCATGAGAAG+GGG 0.611882 8_1:+33623947 None:intergenic
ACTTACAGATGTTTCACCGT+GGG 0.613683 8_1:+33626966 None:intergenic
TCCAATCTTCCATAGAAAGA+CGG 0.615481 8_1:+33629419 None:intergenic
AAGCATTGGGAGCAGATGGG+TGG 0.620511 8_1:-33629162 Msa1190560:CDS
AGTTGATAATTGAAAATGAG+AGG 0.623416 8_1:-33630622 Msa1190560:exon
GCATGGCAGCTGGATAGGCA+AGG 0.624619 8_1:-33626420 Msa1190560:CDS
ATGCAAACACGGAACTTGAG+AGG 0.624706 8_1:+33626064 None:intergenic
GAAATATAACAGGATAACAT+GGG 0.624718 8_1:+33629326 None:intergenic
CCTCCACAAACAATCAGCAC+AGG 0.628839 8_1:+33628810 None:intergenic
AACAGGGAAGAGTGGAGATG+AGG 0.629998 8_1:+33625996 None:intergenic
TAACATGAGGAATGCAAACA+CGG 0.630797 8_1:+33626053 None:intergenic
AAAGTATCCAGCCATATGCA+TGG 0.638580 8_1:-33626437 Msa1190560:CDS
ATATCATTGCTGGTAAAAGG+TGG 0.646618 8_1:-33623771 Msa1190560:three_prime_UTR
AAGAGAACCACTGTTATCCA+CGG 0.647239 8_1:+33628723 None:intergenic
GTACATGGCTGACATAGGAA+AGG 0.648985 8_1:-33628838 Msa1190560:CDS
ACAAAGCGATGCTTGCCTTG+AGG 0.649377 8_1:+33627670 None:intergenic
TGGGTGTGTGATTATCCTGA+AGG 0.656934 8_1:-33629448 Msa1190560:CDS
ACTTATGGGCTGGACTACAA+AGG 0.659219 8_1:-33629646 Msa1190560:CDS
AAGATTCTGAAGAACACCAA+GGG 0.662260 8_1:-33623988 Msa1190560:CDS
TGGGCCCTGAAGTTGAAGAG+AGG 0.674834 8_1:+33629345 None:intergenic
AACGGAACAGAACTATATGG+TGG 0.676905 8_1:+33623820 None:intergenic
CAAGATTCTGAAGAACACCA+AGG 0.690174 8_1:-33623989 Msa1190560:CDS
AACGGAAACAGCCATGACAA+CGG 0.690575 8_1:+33627740 None:intergenic
GACTACAAAGGTAATGTGTG+TGG 0.691674 8_1:-33629634 Msa1190560:CDS
TGGCTGACATAGGAAAGGCA+TGG 0.696862 8_1:-33628833 Msa1190560:CDS
GAATGCTATATCCACAACAA+CGG 0.697067 8_1:+33627112 None:intergenic
GAGACGAATAGACTTACCCA+AGG 0.697590 8_1:-33623914 Msa1190560:CDS
AGTCCAAATCATGTAAAACA+CGG 0.699466 8_1:+33627236 None:intergenic
ATCTGAGCTCCAATTCACCA+AGG 0.701858 8_1:+33629590 None:intergenic
AAACAAGACATACCACAACA+GGG 0.717527 8_1:+33625980 None:intergenic
ACTTGTGTGTGTCTAACATG+AGG 0.718763 8_1:+33626040 None:intergenic
TGCAATGCCGTGGATAACAG+TGG 0.725507 8_1:-33628730 Msa1190560:CDS
AACTTACAGATGTTTCACCG+TGG 0.729919 8_1:+33626965 None:intergenic
GATGGAGTTACTCAAATGGG+TGG 0.738226 8_1:-33630562 Msa1190560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTGAGATTATTTTTA+AGG - chr8_1:33624023-33624042 Msa1190560:CDS 10.0%
!!! TCATATTTATTTTTTTACAT+CGG + chr8_1:33625740-33625759 None:intergenic 10.0%
!! TATGAACAAAATTATAATTA+TGG + chr8_1:33625925-33625944 None:intergenic 10.0%
!!! TTAAACTATTTTCTTATTTT+TGG - chr8_1:33626786-33626805 Msa1190560:intron 10.0%
!!! AAAAGTAACAATATTTTAAT+TGG - chr8_1:33627548-33627567 Msa1190560:intron 10.0%
!! ATAAATTACATTTAATAACT+TGG + chr8_1:33627708-33627727 None:intergenic 10.0%
!! TTTATAATCATATACTTTAA+TGG - chr8_1:33628360-33628379 Msa1190560:intron 10.0%
!!! AATTTACAAAATTTCTTTTA+TGG + chr8_1:33629796-33629815 None:intergenic 10.0%
!! TAACAGAATAATATAAGAAT+AGG + chr8_1:33625972-33625991 None:intergenic 15.0%
!!! ATATCCTTTATATTCTAAAA+CGG + chr8_1:33626028-33626047 None:intergenic 15.0%
!!! AATATTTTAGTTTCTTTATC+TGG - chr8_1:33626283-33626302 Msa1190560:intron 15.0%
!! TAAGAAAATAGTTTAATGAA+AGG + chr8_1:33626782-33626801 None:intergenic 15.0%
!!! AAAATATTGTTACTTTTGAT+GGG + chr8_1:33627545-33627564 None:intergenic 15.0%
!!! TAAAATATTGTTACTTTTGA+TGG + chr8_1:33627546-33627565 None:intergenic 15.0%
!!! ATGTCTATTTCTAAAATATA+TGG + chr8_1:33628391-33628410 None:intergenic 15.0%
!!! CAACATTTAGATTTTAATTA+AGG - chr8_1:33630465-33630484 Msa1190560:CDS 15.0%
!!! TTGTTATCTTTATTGCTTTT+TGG - chr8_1:33623825-33623844 Msa1190560:three_prime_UTR 20.0%
!!! ATTGCAAATTTTAATACATC+TGG - chr8_1:33623973-33623992 Msa1190560:CDS 20.0%
!!! TTTTAAGGAAAGTTTGTAAA+TGG - chr8_1:33624038-33624057 Msa1190560:CDS 20.0%
!! AAGAGAAAAATTGAAAATCA+TGG + chr8_1:33624086-33624105 None:intergenic 20.0%
!!! TTTTATTTTGACTAATGTAC+TGG - chr8_1:33624203-33624222 Msa1190560:intron 20.0%
!!! TTTATTTTGACTAATGTACT+GGG - chr8_1:33624204-33624223 Msa1190560:intron 20.0%
!!! CTTTTTTTTATATACTATCC+AGG - chr8_1:33624392-33624411 Msa1190560:intron 20.0%
!!! ACATAATTTTCACAACAAAA+AGG + chr8_1:33624605-33624624 None:intergenic 20.0%
!!! TATTTTTCTTTCTAGTTTAC+TGG - chr8_1:33625096-33625115 Msa1190560:intron 20.0%
!!! TAATTTTGTTCATATCTTGT+TGG - chr8_1:33625931-33625950 Msa1190560:intron 20.0%
!! AAACTAAAATATTACTACCT+CGG + chr8_1:33626276-33626295 None:intergenic 20.0%
!! ATCCTTACATTAATGTATTT+GGG - chr8_1:33626414-33626433 Msa1190560:CDS 20.0%
!!! ACTTCAATTTTTTTCACAAT+AGG + chr8_1:33626454-33626473 None:intergenic 20.0%
!! GTCATCAAAATAATGATTTA+TGG + chr8_1:33628033-33628052 None:intergenic 20.0%
!! ACAATATATATAACAATCAG+CGG + chr8_1:33628055-33628074 None:intergenic 20.0%
!!! ATGAATAACATTCTAAAGAT+TGG - chr8_1:33628179-33628198 Msa1190560:intron 20.0%
!!! TGAATAACATTCTAAAGATT+GGG - chr8_1:33628180-33628199 Msa1190560:intron 20.0%
!! TAAACACAGATTTACATTAA+TGG - chr8_1:33628512-33628531 Msa1190560:intron 20.0%
!! AAACACAGATTTACATTAAT+GGG - chr8_1:33628513-33628532 Msa1190560:intron 20.0%
!! GAAAAAAAATTTAACAGCAA+TGG + chr8_1:33629196-33629215 None:intergenic 20.0%
!! AGTGCAAAAGAAAAATTAAT+GGG + chr8_1:33629406-33629425 None:intergenic 20.0%
!! TAGTGCAAAAGAAAAATTAA+TGG + chr8_1:33629407-33629426 None:intergenic 20.0%
!!! AGTAAGAATTAGTCATTTTT+AGG - chr8_1:33629473-33629492 Msa1190560:CDS 20.0%
!! TATATATACATTTACGCTAA+TGG - chr8_1:33629848-33629867 Msa1190560:intron 20.0%
!! ATATATACATTTACGCTAAT+GGG - chr8_1:33629849-33629868 Msa1190560:intron 20.0%
!!! TCAACATTTTTTTGACAAAA+TGG - chr8_1:33629881-33629900 Msa1190560:intron 20.0%
!!! CAACATTTTTTTGACAAAAT+GGG - chr8_1:33629882-33629901 Msa1190560:intron 20.0%
!!! GTTTTAGAATTCACATTTAA+TGG + chr8_1:33630186-33630205 None:intergenic 20.0%
!! TATTGTCAGAACTTTATATT+TGG - chr8_1:33630206-33630225 Msa1190560:intron 20.0%
!!! CAATGAAACTAGTATAATTT+TGG - chr8_1:33630433-33630452 Msa1190560:intron 20.0%
!!! TAGTATAATTTTGGTGATTA+TGG - chr8_1:33630442-33630461 Msa1190560:CDS 20.0%
!! ATATGTTTATATATCATTGC+TGG - chr8_1:33630539-33630558 Msa1190560:CDS 20.0%
!!! AGTTGATAATTGAAAATGAG+AGG - chr8_1:33623698-33623717 Msa1190560:three_prime_UTR 25.0%
!! ATGATTGTTAATTCCAGTTT+TGG - chr8_1:33623854-33623873 Msa1190560:three_prime_UTR 25.0%
!!! TTGAACTTTTTTACCTAAGT+GGG + chr8_1:33623895-33623914 None:intergenic 25.0%
!!! GTTTGGTTTGTTAGTTATAA+TGG - chr8_1:33624273-33624292 Msa1190560:intron 25.0%
!!! AAGCATTTCTGAAACTATTT+GGG + chr8_1:33624482-33624501 None:intergenic 25.0%
!!! TAAGCATTTCTGAAACTATT+TGG + chr8_1:33624483-33624502 None:intergenic 25.0%
! GAAATATAACAGGATAACAT+GGG + chr8_1:33624997-33625016 None:intergenic 25.0%
! TTTACACTAGGAAATATAAC+AGG + chr8_1:33625007-33625026 None:intergenic 25.0%
! GTTATATTTCCTAGTGTAAA+TGG - chr8_1:33625007-33625026 Msa1190560:intron 25.0%
! AAGAGAAGATAAGAAATTGA+AGG - chr8_1:33625360-33625379 Msa1190560:intron 25.0%
! ACAATGTTCTTCTACATAAA+AGG - chr8_1:33625642-33625661 Msa1190560:intron 25.0%
! AGAATAACAAGTTAATCAGA+AGG + chr8_1:33625767-33625786 None:intergenic 25.0%
!!! ATGTAGACAATATTGATTTG+GGG + chr8_1:33626112-33626131 None:intergenic 25.0%
!!! GATGTAGACAATATTGATTT+GGG + chr8_1:33626113-33626132 None:intergenic 25.0%
! AAATGTTAAGTGGAGTATAA+TGG + chr8_1:33626145-33626164 None:intergenic 25.0%
! ATTTGTGACAATGGTTAATA+AGG - chr8_1:33626161-33626180 Msa1190560:CDS 25.0%
!! TAGTTTCTTTATCTGGATTT+TGG - chr8_1:33626290-33626309 Msa1190560:intron 25.0%
!! AGTTTCTTTATCTGGATTTT+GGG - chr8_1:33626291-33626310 Msa1190560:intron 25.0%
!! TTTTCTTACAAATTTTCAGC+TGG - chr8_1:33626347-33626366 Msa1190560:CDS 25.0%
! GATCCTTACATTAATGTATT+TGG - chr8_1:33626413-33626432 Msa1190560:CDS 25.0%
! TTACATTAATGTATTTGGGA+GGG - chr8_1:33626418-33626437 Msa1190560:CDS 25.0%
! AACAAAATGATTTCACTTTC+AGG - chr8_1:33626521-33626540 Msa1190560:CDS 25.0%
!! TGATACATATTTTACCAATG+AGG + chr8_1:33627401-33627420 None:intergenic 25.0%
! AAAAAAGCTTAATCAGTAGA+CGG + chr8_1:33627655-33627674 None:intergenic 25.0%
! AAATCGAAATGCTTATATCA+TGG - chr8_1:33627981-33628000 Msa1190560:intron 25.0%
! AGTTATCAAATTGAGTTTGT+CGG + chr8_1:33628587-33628606 None:intergenic 25.0%
!!! GTTAGAGAAAAAGTTTTATC+TGG + chr8_1:33628677-33628696 None:intergenic 25.0%
! GTTTATTCCTTGTGAAAAAT+CGG - chr8_1:33628718-33628737 Msa1190560:CDS 25.0%
! TTTATTCCTTGTGAAAAATC+GGG - chr8_1:33628719-33628738 Msa1190560:CDS 25.0%
!! ATTGTTAGATCTAGAGTTAA+GGG + chr8_1:33628857-33628876 None:intergenic 25.0%
!! TATTGTTAGATCTAGAGTTA+AGG + chr8_1:33628858-33628877 None:intergenic 25.0%
!! TTTGAAACAAACAACGAAAT+GGG + chr8_1:33630073-33630092 None:intergenic 25.0%
! TATATATCATTGCTGGTAAA+AGG - chr8_1:33630546-33630565 Msa1190560:CDS 25.0%
! TTATCAATCCATTTGTCAAA+AGG + chr8_1:33630589-33630608 None:intergenic 25.0%
AGAAGATGAAGAAGATGAAA+GGG + chr8_1:33623633-33623652 None:intergenic 30.0%
TAGAAGATGAAGAAGATGAA+AGG + chr8_1:33623634-33623653 None:intergenic 30.0%
!!! GTTGAACTTTTTTACCTAAG+TGG + chr8_1:33623896-33623915 None:intergenic 30.0%
GTGTATGTTCTTCTGTTATT+TGG - chr8_1:33623919-33623938 Msa1190560:CDS 30.0%
!! TTATTTGGTGTTTCTGCAAT+TGG - chr8_1:33623934-33623953 Msa1190560:CDS 30.0%
ATTACAGTACTAGTTCAAGA+AGG - chr8_1:33624237-33624256 Msa1190560:intron 30.0%
TTACAGTACTAGTTCAAGAA+GGG - chr8_1:33624238-33624257 Msa1190560:intron 30.0%
! AAGGGATCAATCTTTTTGTT+TGG - chr8_1:33624256-33624275 Msa1190560:intron 30.0%
! ATAATGGCTGGTTAAGAATT+TGG - chr8_1:33624289-33624308 Msa1190560:intron 30.0%
TCAAATAAGCAAATTCAAGC+AGG - chr8_1:33624518-33624537 Msa1190560:intron 30.0%
TGCTGATGATTCTCTTAAAT+GGG - chr8_1:33624853-33624872 Msa1190560:intron 30.0%
GGAAATATAACAGGATAACA+TGG + chr8_1:33624998-33625017 None:intergenic 30.0%
AAACATCAATGTGCATCATA+AGG + chr8_1:33625046-33625065 None:intergenic 30.0%
!! CAACTTCCTACTACTTTTAT+TGG - chr8_1:33625269-33625288 Msa1190560:intron 30.0%
AGAACACCAATAAAAGTAGT+AGG + chr8_1:33625278-33625297 None:intergenic 30.0%
TCTGATTGTAACTTTGTACA+AGG - chr8_1:33625295-33625314 Msa1190560:intron 30.0%
AGCGTTGTGTATATTATTGT+AGG - chr8_1:33625420-33625439 Msa1190560:intron 30.0%
! GTTTCGATTTGTATTTACAG+AGG - chr8_1:33625460-33625479 Msa1190560:intron 30.0%
! TTTGTATTTACAGAGGTACA+TGG - chr8_1:33625467-33625486 Msa1190560:intron 30.0%
GTTCTTCTACATAAAAGGTT+AGG - chr8_1:33625647-33625666 Msa1190560:intron 30.0%
! GACTCTAGAAATACTGAAAT+AGG + chr8_1:33625684-33625703 None:intergenic 30.0%
TACAACGATACTTTCATAAG+AGG + chr8_1:33625717-33625736 None:intergenic 30.0%
! TCTAAAACGGCACATAATTT+GGG + chr8_1:33626015-33626034 None:intergenic 30.0%
!! TTCTAAAACGGCACATAATT+TGG + chr8_1:33626016-33626035 None:intergenic 30.0%
!!! TGTGCCGTTTTAGAATATAA+AGG - chr8_1:33626021-33626040 Msa1190560:CDS 30.0%
!! TGTAGACAATATTGATTTGG+GGG + chr8_1:33626111-33626130 None:intergenic 30.0%
! CGATGTAGACAATATTGATT+TGG + chr8_1:33626114-33626133 None:intergenic 30.0%
CTCCCAAATACATTAATGTA+AGG + chr8_1:33626419-33626438 None:intergenic 30.0%
CTTACATTAATGTATTTGGG+AGG - chr8_1:33626417-33626436 Msa1190560:CDS 30.0%
AATAGCAATTGAAGTGAGAA+CGG + chr8_1:33626601-33626620 None:intergenic 30.0%
! TCACTTCAATTGCTATTGTA+CGG - chr8_1:33626604-33626623 Msa1190560:intron 30.0%
TTGTTTAACATTGTGACAAC+TGG + chr8_1:33626857-33626876 None:intergenic 30.0%
AGTCCAAATCATGTAAAACA+CGG + chr8_1:33627087-33627106 None:intergenic 30.0%
ATTCATTACACACCACATAT+TGG - chr8_1:33627227-33627246 Msa1190560:CDS 30.0%
AGTATGGAAATTCCAATATG+TGG + chr8_1:33627242-33627261 None:intergenic 30.0%
!!! TCCATACTTTTTCACCTATT+TGG - chr8_1:33627254-33627273 Msa1190560:CDS 30.0%
!!! CCATACTTTTTCACCTATTT+GGG - chr8_1:33627255-33627274 Msa1190560:CDS 30.0%
! AACATCTGTAAGTTGCTATT+TGG - chr8_1:33627364-33627383 Msa1190560:intron 30.0%
! TGTCATTTGTAGAATCAATC+CGG - chr8_1:33627830-33627849 Msa1190560:intron 30.0%
TGAGAAAACATTGAGAAGAT+TGG + chr8_1:33627933-33627952 None:intergenic 30.0%
! AATCTTCTCAATGTTTTCTC+AGG - chr8_1:33627932-33627951 Msa1190560:CDS 30.0%
ATTAGCACCATACAATTTGA+TGG + chr8_1:33628475-33628494 None:intergenic 30.0%
CAAGGAATAAACATTGAAGT+GGG + chr8_1:33628710-33628729 None:intergenic 30.0%
ACAAGGAATAAACATTGAAG+TGG + chr8_1:33628711-33628730 None:intergenic 30.0%
!! GAAGTTGTTTTGCGATATTT+AGG + chr8_1:33628766-33628785 None:intergenic 30.0%
TCGTCTGCAAAAATTTATTG+AGG + chr8_1:33628799-33628818 None:intergenic 30.0%
TATGACAATAAGTGCTTGTA+CGG - chr8_1:33629031-33629050 Msa1190560:intron 30.0%
ATTAATCAACCTTCGTCAAA+GGG + chr8_1:33629141-33629160 None:intergenic 30.0%
AATTAATCAACCTTCGTCAA+AGG + chr8_1:33629142-33629161 None:intergenic 30.0%
!! AAAAGTGGTGTTATTGGAAA+GGG + chr8_1:33629348-33629367 None:intergenic 30.0%
!! TTAATGGGTTCGTCTAATTA+TGG + chr8_1:33629391-33629410 None:intergenic 30.0%
! AATTTTTCTTTTGCACTACC+AGG - chr8_1:33629409-33629428 Msa1190560:CDS 30.0%
TTCTTACTAATCCAACAAGT+CGG + chr8_1:33629461-33629480 None:intergenic 30.0%
!! CATTTTTAGGAACAACAAAG+TGG - chr8_1:33629486-33629505 Msa1190560:CDS 30.0%
ACTCGTAAACTATCTACATA+AGG - chr8_1:33629918-33629937 Msa1190560:intron 30.0%
CAAGTTCTCAAATCAAACAA+TGG - chr8_1:33629977-33629996 Msa1190560:intron 30.0%
TTGAAACAAACAACGAAATG+GGG + chr8_1:33630072-33630091 None:intergenic 30.0%
!! CTTTGAAACAAACAACGAAA+TGG + chr8_1:33630074-33630093 None:intergenic 30.0%
ATTTACAAGCGAAGTAAGAA+CGG + chr8_1:33630521-33630540 None:intergenic 30.0%
!! AATGGATTGATAACTTTGTG+AGG - chr8_1:33630596-33630615 Msa1190560:CDS 30.0%
!! GGATTTTGAGAATTTTGAGT+TGG - chr8_1:33630617-33630636 Msa1190560:exon 30.0%
!!! GTTATTTTTTGAGGGAAAAG+GGG + chr8_1:33630669-33630688 None:intergenic 30.0%
!!! GGTTATTTTTTGAGGGAAAA+GGG + chr8_1:33630670-33630689 None:intergenic 30.0%
!!! AGGTTATTTTTTGAGGGAAA+AGG + chr8_1:33630671-33630690 None:intergenic 30.0%
! TTTTCCCTCAAAAAATAACC+TGG - chr8_1:33630670-33630689 Msa1190560:five_prime_UTR 30.0%
!!! TGAACCAGGTTATTTTTTGA+GGG + chr8_1:33630677-33630696 None:intergenic 30.0%
TAATGCTATTATTGTGAACC+AGG + chr8_1:33630691-33630710 None:intergenic 30.0%
GAAGATGAAGAAGATGAAAG+GGG + chr8_1:33623632-33623651 None:intergenic 35.0%
TTGAAAATGAGAGGTCCTTT+AGG - chr8_1:33623707-33623726 Msa1190560:three_prime_UTR 35.0%
! AAGTGATGGAGTTACTCAAA+TGG - chr8_1:33623754-33623773 Msa1190560:three_prime_UTR 35.0%
! AGTGATGGAGTTACTCAAAT+GGG - chr8_1:33623755-33623774 Msa1190560:three_prime_UTR 35.0%
!!! TCCAGTTTTGGTTTTAACCA+AGG - chr8_1:33623866-33623885 Msa1190560:three_prime_UTR 35.0%
TCCTTGGTTAAAACCAAAAC+TGG + chr8_1:33623870-33623889 None:intergenic 35.0%
ATCTGGTACTTTCTCTTGAT+GGG - chr8_1:33623990-33624009 Msa1190560:CDS 35.0%
! ATGGATGCATTTTTCTTCCT+AGG - chr8_1:33624057-33624076 Msa1190560:CDS 35.0%
! TGGATGCATTTTTCTTCCTA+GGG - chr8_1:33624058-33624077 Msa1190560:CDS 35.0%
!! GGTTTGTTAGTTATAATGGC+TGG - chr8_1:33624277-33624296 Msa1190560:intron 35.0%
ATAAGCCGTTTATCCAAACA+GGG + chr8_1:33624316-33624335 None:intergenic 35.0%
GCTTATGAACATGTCATAAG+CGG - chr8_1:33624442-33624461 Msa1190560:intron 35.0%
!! TTTCTGAAACTATTTGGGAG+AGG + chr8_1:33624477-33624496 None:intergenic 35.0%
CTAGCAATATGATTTACCTC+AGG - chr8_1:33624648-33624667 Msa1190560:intron 35.0%
ATTTACCTCAGGCTTACTTA+TGG - chr8_1:33624659-33624678 Msa1190560:intron 35.0%
TTTACCTCAGGCTTACTTAT+GGG - chr8_1:33624660-33624679 Msa1190560:intron 35.0%
TCAATCCAGTCTGATAAACT+TGG + chr8_1:33624772-33624791 None:intergenic 35.0%
AGTTTATCAGACTGGATTGA+AGG - chr8_1:33624772-33624791 Msa1190560:intron 35.0%
CATTTAAGAGAATCATCAGC+AGG + chr8_1:33624854-33624873 None:intergenic 35.0%
CTGCTGATGATTCTCTTAAA+TGG - chr8_1:33624852-33624871 Msa1190560:intron 35.0%
TCCAATCTTCCATAGAAAGA+CGG + chr8_1:33624904-33624923 None:intergenic 35.0%
AGTTTCTCATATCAGGTGTA+AGG + chr8_1:33624955-33624974 None:intergenic 35.0%
GTTTACTCACCATTTACACT+AGG + chr8_1:33625019-33625038 None:intergenic 35.0%
TTTCATTACACGTTGTCGAA+AGG + chr8_1:33625073-33625092 None:intergenic 35.0%
TTTCGACAACGTGTAATGAA+AGG - chr8_1:33625072-33625091 Msa1190560:intron 35.0%
TTCGACAACGTGTAATGAAA+GGG - chr8_1:33625073-33625092 Msa1190560:intron 35.0%
! AAACACATCACTGAAGCATT+GGG - chr8_1:33625145-33625164 Msa1190560:intron 35.0%
CAAATCACAGACAGAAAAAG+AGG + chr8_1:33625543-33625562 None:intergenic 35.0%
! CTCTTTTTCTGTCTGTGATT+TGG - chr8_1:33625541-33625560 Msa1190560:intron 35.0%
! TGATTTGGCTGATGATGATT+CGG - chr8_1:33625556-33625575 Msa1190560:intron 35.0%
TAAAAGGTTAGGATCTCTCA+TGG - chr8_1:33625658-33625677 Msa1190560:intron 35.0%
! TGTTGCTGTTATGTGTATTG+TGG - chr8_1:33625852-33625871 Msa1190560:intron 35.0%
!! TGGAGTATGCTTGATGATTT+TGG - chr8_1:33625872-33625891 Msa1190560:intron 35.0%
!! GGAGTATGCTTGATGATTTT+GGG - chr8_1:33625873-33625892 Msa1190560:intron 35.0%
! GCACATAATTTGGGATAAAC+TGG + chr8_1:33626006-33626025 None:intergenic 35.0%
! AGCGAAACGATACTCATTTT+TGG + chr8_1:33626051-33626070 None:intergenic 35.0%
!! TATTGATTTGGGGGTAGAAT+TGG + chr8_1:33626102-33626121 None:intergenic 35.0%
CCATTGTCACAAATGTTAAG+TGG + chr8_1:33626155-33626174 None:intergenic 35.0%
CCACTTAACATTTGTGACAA+TGG - chr8_1:33626152-33626171 Msa1190560:CDS 35.0%
! CTTACAAATTTTCAGCTGGA+TGG - chr8_1:33626351-33626370 Msa1190560:CDS 35.0%
! AAATTTTCAGCTGGATGGAT+TGG - chr8_1:33626356-33626375 Msa1190560:CDS 35.0%
!! TTCTCTAAAACTTTCTGTGC+TGG - chr8_1:33626719-33626738 Msa1190560:intron 35.0%
AAATTGTCTGACTCAGGTAA+TGG + chr8_1:33626967-33626986 None:intergenic 35.0%
CCAATTAAATTGTCTGACTC+AGG + chr8_1:33626973-33626992 None:intergenic 35.0%
CCTGAGTCAGACAATTTAAT+TGG - chr8_1:33626970-33626989 Msa1190560:intron 35.0%
GTATAATTCTAACTGTCCAC+AGG - chr8_1:33626992-33627011 Msa1190560:CDS 35.0%
AAATCATGTAAAACACGGCA+AGG + chr8_1:33627082-33627101 None:intergenic 35.0%
! TTGCCGTGTTTTACATGATT+TGG - chr8_1:33627081-33627100 Msa1190560:CDS 35.0%
GAATGCTATATCCACAACAA+CGG + chr8_1:33627211-33627230 None:intergenic 35.0%
CCCAAATAGGTGAAAAAGTA+TGG + chr8_1:33627258-33627277 None:intergenic 35.0%
! GTCTGTTGCTTCTTATTACT+GGG - chr8_1:33627331-33627350 Msa1190560:CDS 35.0%
AACTGCTTACATCAACAACT+TGG - chr8_1:33627489-33627508 Msa1190560:intron 35.0%
! ACAGACGCTGGTATTTATTT+TGG - chr8_1:33627614-33627633 Msa1190560:intron 35.0%
GAGGAAAAAACTGACAGAAA+TGG + chr8_1:33627754-33627773 None:intergenic 35.0%
!!! CAGTTTTTTCCTCCATGAAA+AGG - chr8_1:33627761-33627780 Msa1190560:CDS 35.0%
TAACATGAGGAATGCAAACA+CGG + chr8_1:33628270-33628289 None:intergenic 35.0%
AAACAAGACATACCACAACA+GGG + chr8_1:33628343-33628362 None:intergenic 35.0%
TAAACAAGACATACCACAAC+AGG + chr8_1:33628344-33628363 None:intergenic 35.0%
CTTTGCACCATCAAATTGTA+TGG - chr8_1:33628465-33628484 Msa1190560:intron 35.0%
TAGATATGCTGTTATGGCAT+TGG + chr8_1:33628834-33628853 None:intergenic 35.0%
TAAGGGTAGATATGCTGTTA+TGG + chr8_1:33628840-33628859 None:intergenic 35.0%
!!! AGCTTCTTATTTTCCAAGCA+AGG - chr8_1:33628884-33628903 Msa1190560:intron 35.0%
!!! GCTTCTTATTTTCCAAGCAA+GGG - chr8_1:33628885-33628904 Msa1190560:intron 35.0%
CACTTATTGTCATAGGAAGT+GGG + chr8_1:33629025-33629044 None:intergenic 35.0%
GTACAAGCACTTATTGTCAT+AGG + chr8_1:33629032-33629051 None:intergenic 35.0%
CAACTAAGAATCTTTCTGTG+TGG + chr8_1:33629228-33629247 None:intergenic 35.0%
CACACAGAAAGATTCTTAGT+TGG - chr8_1:33629226-33629245 Msa1190560:intron 35.0%
GATGAGACGAATTATAAGAC+TGG - chr8_1:33629261-33629280 Msa1190560:intron 35.0%
TCAAGAATTGAAGAAGGACA+AGG + chr8_1:33629323-33629342 None:intergenic 35.0%
!! AAAGTGGTGTTATTGGAAAG+GGG + chr8_1:33629347-33629366 None:intergenic 35.0%
!! CAAAAGTGGTGTTATTGGAA+AGG + chr8_1:33629349-33629368 None:intergenic 35.0%
!! CTGTTCAAAAGTGGTGTTAT+TGG + chr8_1:33629354-33629373 None:intergenic 35.0%
!!! TTTTGAACAGCTTTAGACCA+TGG - chr8_1:33629364-33629383 Msa1190560:CDS 35.0%
AAACTGAACAGTGAGTACAA+TGG - chr8_1:33629592-33629611 Msa1190560:CDS 35.0%
! TTGATTTGAGAACTTGATGC+CGG + chr8_1:33629973-33629992 None:intergenic 35.0%
AATGCAGCTAAGTTAGAAAC+AGG + chr8_1:33630013-33630032 None:intergenic 35.0%
!! TATTTGGTGCATTGTAATGC+AGG - chr8_1:33630222-33630241 Msa1190560:intron 35.0%
! AAGATTCTGAAGAACACCAA+GGG - chr8_1:33630332-33630351 Msa1190560:intron 35.0%
! TAAGTCTATTCGTCTCGTTT+TGG + chr8_1:33630402-33630421 None:intergenic 35.0%
CTAGTTTCATTGTGATCCTT+GGG + chr8_1:33630425-33630444 None:intergenic 35.0%
! ACTAGTTTCATTGTGATCCT+TGG + chr8_1:33630426-33630445 None:intergenic 35.0%
AAGAACGGAACAGAACTATA+TGG + chr8_1:33630506-33630525 None:intergenic 35.0%
ATATCATTGCTGGTAAAAGG+TGG - chr8_1:33630549-33630568 Msa1190560:CDS 35.0%
! TTGGGTTACCTTTTGACAAA+TGG - chr8_1:33630578-33630597 Msa1190560:CDS 35.0%
! AGGGGATTTTATCATGGTAA+AGG + chr8_1:33630651-33630670 None:intergenic 35.0%
!!! GTGAACCAGGTTATTTTTTG+AGG + chr8_1:33630678-33630697 None:intergenic 35.0%
! AAAGGGGTTAGTAGAGAATG+AGG + chr8_1:33623616-33623635 None:intergenic 40.0%
GGAAGCTATACATCAAGTGA+TGG - chr8_1:33623740-33623759 Msa1190560:three_prime_UTR 40.0%
TTAACCAAGGAAACCCACTT+AGG - chr8_1:33623879-33623898 Msa1190560:three_prime_UTR 40.0%
! TTTACCTAAGTGGGTTTCCT+TGG + chr8_1:33623886-33623905 None:intergenic 40.0%
CATCTGGTACTTTCTCTTGA+TGG - chr8_1:33623989-33624008 Msa1190560:CDS 40.0%
! GGATGCATTTTTCTTCCTAG+GGG - chr8_1:33624059-33624078 Msa1190560:CDS 40.0%
ATTGAAAATCATGGACCCCT+AGG + chr8_1:33624077-33624096 None:intergenic 40.0%
TTAAGAATTTGGCCCCTGTT+TGG - chr8_1:33624300-33624319 Msa1190560:intron 40.0%
TAAGCCGTTTATCCAAACAG+GGG + chr8_1:33624315-33624334 None:intergenic 40.0%
GATAAGCCGTTTATCCAAAC+AGG + chr8_1:33624317-33624336 None:intergenic 40.0%
ATACTATCCAGGAGAGCTTA+TGG - chr8_1:33624403-33624422 Msa1190560:intron 40.0%
CTTATTTCCATAAGCTCTCC+TGG + chr8_1:33624413-33624432 None:intergenic 40.0%
AAGCCCTACTTCCTAGTATA+CGG + chr8_1:33624545-33624564 None:intergenic 40.0%
GACTACAAAGGTAATGTGTG+TGG - chr8_1:33624686-33624705 Msa1190560:intron 40.0%
GTGAATTGGAGCTCAGATAT+TGG - chr8_1:33624735-33624754 Msa1190560:intron 40.0%
CCAGTCTGATAAACTTGGTT+AGG + chr8_1:33624767-33624786 None:intergenic 40.0%
CCTAACCAAGTTTATCAGAC+TGG - chr8_1:33624764-33624783 Msa1190560:intron 40.0%
GAGAATCATCAGCAGGAATA+GGG + chr8_1:33624847-33624866 None:intergenic 40.0%
AGAGAATCATCAGCAGGAAT+AGG + chr8_1:33624848-33624867 None:intergenic 40.0%
AGGAGATATCCGTCTTTCTA+TGG - chr8_1:33624892-33624911 Msa1190560:intron 40.0%
TCCGTCTTTCTATGGAAGAT+TGG - chr8_1:33624900-33624919 Msa1190560:intron 40.0%
AGAGAGGAGTTTCTCATATC+AGG + chr8_1:33624962-33624981 None:intergenic 40.0%
AAACTCCTCTCTTCAACTTC+AGG - chr8_1:33624970-33624989 Msa1190560:intron 40.0%
AACTCCTCTCTTCAACTTCA+GGG - chr8_1:33624971-33624990 Msa1190560:intron 40.0%
! TTGATGGACGAGCAATAAAC+TGG + chr8_1:33625127-33625146 None:intergenic 40.0%
TGCTTCAGTGATGTGTTTGA+TGG + chr8_1:33625143-33625162 None:intergenic 40.0%
CAAACACATCACTGAAGCAT+TGG - chr8_1:33625144-33625163 Msa1190560:intron 40.0%
GAAGCAAAAAATTCGTGCCA+GGG - chr8_1:33625382-33625401 Msa1190560:intron 40.0%
CACAACGCTGAATATGCATA+AGG + chr8_1:33625409-33625428 None:intergenic 40.0%
AAGAGAACCACTGTTATCCA+CGG + chr8_1:33625600-33625619 None:intergenic 40.0%
TCTACGTTCTGTGTGTTTCA+TGG - chr8_1:33625789-33625808 Msa1190560:intron 40.0%
CTACGTTCTGTGTGTTTCAT+GGG - chr8_1:33625790-33625809 Msa1190560:intron 40.0%
!! TCATGGGTTAGACACAAGTT+AGG - chr8_1:33625806-33625825 Msa1190560:intron 40.0%
!!! CAACACTTATTTTGTGACCG+AGG - chr8_1:33626256-33626275 Msa1190560:intron 40.0%
!! GATGCTATTTCTCCCATCAT+TGG - chr8_1:33626383-33626402 Msa1190560:CDS 40.0%
TGTACTTATGACCGTTGTCA+TGG - chr8_1:33626569-33626588 Msa1190560:CDS 40.0%
!! ATTACTTTTGCAGCAACCTG+TGG + chr8_1:33627011-33627030 None:intergenic 40.0%
CAGGTTGCTGCAAAAGTAAT+AGG - chr8_1:33627011-33627030 Msa1190560:CDS 40.0%
AGGATAGCATATGGGATGAT+TGG + chr8_1:33627062-33627081 None:intergenic 40.0%
TGCAGTCATTCTGAACAATC+TGG + chr8_1:33627139-33627158 None:intergenic 40.0%
CGTATGATCTTGTGGCAAAA+CGG - chr8_1:33627174-33627193 Msa1190560:CDS 40.0%
GTATGATCTTGTGGCAAAAC+GGG - chr8_1:33627175-33627194 Msa1190560:CDS 40.0%
! TTCACCTATTTGGGTGCTAT+TGG - chr8_1:33627264-33627283 Msa1190560:CDS 40.0%
!! TCACCTATTTGGGTGCTATT+GGG - chr8_1:33627265-33627284 Msa1190560:CDS 40.0%
! GGTCTGTTGCTTCTTATTAC+TGG - chr8_1:33627330-33627349 Msa1190560:CDS 40.0%
ACTTACAGATGTTTCACCGT+GGG + chr8_1:33627357-33627376 None:intergenic 40.0%
AACTTACAGATGTTTCACCG+TGG + chr8_1:33627358-33627377 None:intergenic 40.0%
! TGGCTCAAGTTTTTCCTCAT+TGG - chr8_1:33627384-33627403 Msa1190560:intron 40.0%
TGTTTATCTGTCGCACAATG+AGG + chr8_1:33627444-33627463 None:intergenic 40.0%
! GTAACGCATAAGCCTTTTCA+TGG + chr8_1:33627776-33627795 None:intergenic 40.0%
GAAGAGATTCAAGCAGAAAC+CGG + chr8_1:33627852-33627871 None:intergenic 40.0%
! AAAGTATCCAGCCATATGCA+TGG - chr8_1:33627883-33627902 Msa1190560:intron 40.0%
! GTTTTCTCAGGTGTATTGAG+TGG - chr8_1:33627944-33627963 Msa1190560:CDS 40.0%
TGCTTGCAGATTGCTATAAC+TGG - chr8_1:33628113-33628132 Msa1190560:intron 40.0%
ATTGGGCGTCTTAATGTGAT+CGG - chr8_1:33628197-33628216 Msa1190560:intron 40.0%
!!! GGAGATGTCATTTTGTTCCT+TGG - chr8_1:33628218-33628237 Msa1190560:intron 40.0%
ACTTGTGTGTGTCTAACATG+AGG + chr8_1:33628283-33628302 None:intergenic 40.0%
GAGCTAATGTCGGATCAAAA+TGG + chr8_1:33628442-33628461 None:intergenic 40.0%
TGCAAAGCATGAGCTAATGT+CGG + chr8_1:33628452-33628471 None:intergenic 40.0%
TTCCTTGTGAAAAATCGGGT+TGG - chr8_1:33628723-33628742 Msa1190560:CDS 40.0%
! TTCCAACCCGATTTTTCACA+AGG + chr8_1:33628728-33628747 None:intergenic 40.0%
TTGTGAGCAAGAGTAACATG+AGG - chr8_1:33628960-33628979 Msa1190560:intron 40.0%
!! GAGAGGTGCTTCAAAATGAA+TGG + chr8_1:33628993-33629012 None:intergenic 40.0%
GCACTTATTGTCATAGGAAG+TGG + chr8_1:33629026-33629045 None:intergenic 40.0%
TCACCACCTTGTTCTTCTTT+AGG - chr8_1:33629081-33629100 Msa1190560:intron 40.0%
CACCACCTTGTTCTTCTTTA+GGG - chr8_1:33629082-33629101 Msa1190560:intron 40.0%
TGTAGCCCTAAAGAAGAACA+AGG + chr8_1:33629090-33629109 None:intergenic 40.0%
CTAAGAATCTTTCTGTGTGG+TGG + chr8_1:33629225-33629244 None:intergenic 40.0%
GAAGAAGGACAAGGAAACTT+AGG + chr8_1:33629314-33629333 None:intergenic 40.0%
AGGGGTTCAAGAATTGAAGA+AGG + chr8_1:33629329-33629348 None:intergenic 40.0%
! GGTCTAAAGCTGTTCAAAAG+TGG + chr8_1:33629363-33629382 None:intergenic 40.0%
GTTCGTCTAATTATGGTCCA+TGG + chr8_1:33629384-33629403 None:intergenic 40.0%
! TCTGGTTTCATATCTACTCC+TGG + chr8_1:33629430-33629449 None:intergenic 40.0%
ATATCTGGCCGAAATTGAAC+AGG - chr8_1:33629643-33629662 Msa1190560:CDS 40.0%
TATCTGGCCGAAATTGAACA+GGG - chr8_1:33629644-33629663 Msa1190560:CDS 40.0%
TGTTCAGTGCTGCATTTGAT+TGG - chr8_1:33629699-33629718 Msa1190560:intron 40.0%
!! ATTTACGCTAATGGGCTTGT+GGG - chr8_1:33629857-33629876 Msa1190560:intron 40.0%
CATCTAGTTGATTGTATCGC+CGG - chr8_1:33629951-33629970 Msa1190560:intron 40.0%
CATTGTAATGCAGGTATGCT+GGG - chr8_1:33630231-33630250 Msa1190560:intron 40.0%
TGCAACTCTATTCTTTGCAG+TGG - chr8_1:33630270-33630289 Msa1190560:intron 40.0%
AACTCTATTCTTTGCAGTGG+TGG - chr8_1:33630273-33630292 Msa1190560:intron 40.0%
!! CTTGGTGTTCTTCAGAATCT+TGG + chr8_1:33630333-33630352 None:intergenic 40.0%
! CAAGATTCTGAAGAACACCA+AGG - chr8_1:33630331-33630350 Msa1190560:intron 40.0%
AACGGAACAGAACTATATGG+TGG + chr8_1:33630503-33630522 None:intergenic 40.0%
! GGGAAAAGGGGATTTTATCA+TGG + chr8_1:33630657-33630676 None:intergenic 40.0%
CTTCCTATCACTGCACCTAA+AGG + chr8_1:33623725-33623744 None:intergenic 45.0%
GATGGAGTTACTCAAATGGG+TGG - chr8_1:33623758-33623777 Msa1190560:three_prime_UTR 45.0%
TTGGCCCCTGTTTGGATAAA+CGG - chr8_1:33624308-33624327 Msa1190560:intron 45.0%
AGCCCTACTTCCTAGTATAC+GGG + chr8_1:33624544-33624563 None:intergenic 45.0%
!! ACTTATGGGCTGGACTACAA+AGG - chr8_1:33624674-33624693 Msa1190560:intron 45.0%
ATCTGAGCTCCAATTCACCA+AGG + chr8_1:33624733-33624752 None:intergenic 45.0%
TGCTCGTAGCATATGCTTGT+CGG - chr8_1:33624817-33624836 Msa1190560:intron 45.0%
TGGGTGTGTGATTATCCTGA+AGG - chr8_1:33624872-33624891 Msa1190560:intron 45.0%
GAAAGACGGATATCTCCTTC+AGG + chr8_1:33624890-33624909 None:intergenic 45.0%
TTCTCGATCAGCTGTCTTGA+AGG - chr8_1:33625235-33625254 Msa1190560:intron 45.0%
GGAAGCAAAAAATTCGTGCC+AGG - chr8_1:33625381-33625400 Msa1190560:intron 45.0%
CTGAATATGCATAAGGTCCC+TGG + chr8_1:33625402-33625421 None:intergenic 45.0%
GTACATGGCTGACATAGGAA+AGG - chr8_1:33625482-33625501 Msa1190560:intron 45.0%
!! CTGTGCTGATTGTTTGTGGA+GGG - chr8_1:33625511-33625530 Msa1190560:intron 45.0%
! ATTTTGTTGCTGCAATGCCG+TGG - chr8_1:33625580-33625599 Msa1190560:intron 45.0%
! TGGGTTAGACACAAGTTAGG+CGG - chr8_1:33625809-33625828 Msa1190560:intron 45.0%
GGATCATGCTCACCAATGAT+GGG + chr8_1:33626398-33626417 None:intergenic 45.0%
AGGATCATGCTCACCAATGA+TGG + chr8_1:33626399-33626418 None:intergenic 45.0%
AACGGAAACAGCCATGACAA+CGG + chr8_1:33626583-33626602 None:intergenic 45.0%
TATTGTACGGCGCATCCTTA+TGG - chr8_1:33626617-33626636 Msa1190560:intron 45.0%
TGAGGACAGATGTTGCCATA+AGG + chr8_1:33626635-33626654 None:intergenic 45.0%
TATGGCAACATCTGTCCTCA+AGG - chr8_1:33626635-33626654 Msa1190560:intron 45.0%
ACACGGCAAGGATAGCATAT+GGG + chr8_1:33627070-33627089 None:intergenic 45.0%
AACACGGCAAGGATAGCATA+TGG + chr8_1:33627071-33627090 None:intergenic 45.0%
GCTCTCCATTTATTCAGCTC+TGG - chr8_1:33627113-33627132 Msa1190560:CDS 45.0%
TCTGGCCAGAGCTGAATAAA+TGG + chr8_1:33627121-33627140 None:intergenic 45.0%
GCACGCTACGAAAAATTGTG+TGG + chr8_1:33627291-33627310 None:intergenic 45.0%
!! GTAGACGGTCTTGTTCAAGT+CGG + chr8_1:33627640-33627659 None:intergenic 45.0%
! ACGCATAAGCCTTTTCATGG+AGG + chr8_1:33627773-33627792 None:intergenic 45.0%
AGGCTTATGCGTTACAGTCT+CGG - chr8_1:33627781-33627800 Msa1190560:intron 45.0%
ATGCAAACACGGAACTTGAG+AGG + chr8_1:33628259-33628278 None:intergenic 45.0%
GACACACACAAGTACAGTTC+TGG - chr8_1:33628290-33628309 Msa1190560:intron 45.0%
!! GTGGAGATGAGGTCTTGTTA+TGG + chr8_1:33628316-33628335 None:intergenic 45.0%
GTTTGTCGGAAACAGCTTGA+GGG + chr8_1:33628573-33628592 None:intergenic 45.0%
AGTTTGTCGGAAACAGCTTG+AGG + chr8_1:33628574-33628593 None:intergenic 45.0%
TGAGCAAGAGTAACATGAGG+AGG - chr8_1:33628963-33628982 Msa1190560:intron 45.0%
TGATCATTGAGGCAGCATCA+AGG + chr8_1:33629064-33629083 None:intergenic 45.0%
GAACAAGGTGGTGATCATTG+AGG + chr8_1:33629075-33629094 None:intergenic 45.0%
AGCCCTAAAGAAGAACAAGG+TGG + chr8_1:33629087-33629106 None:intergenic 45.0%
GAAGTAGAACCCTTTGACGA+AGG - chr8_1:33629129-33629148 Msa1190560:CDS 45.0%
AACAAGTCGGTCTCTTTCTC+TGG + chr8_1:33629448-33629467 None:intergenic 45.0%
!! AGAGAAAGAGACCGACTTGT+TGG - chr8_1:33629447-33629466 Msa1190560:CDS 45.0%
TGAGCTGCTGTGCTCTTATT+TGG + chr8_1:33629520-33629539 None:intergenic 45.0%
GCTCAAACAATGGTGGTTCA+TGG - chr8_1:33629535-33629554 Msa1190560:CDS 45.0%
CTGAACAGTGAGTACAATGG+TGG - chr8_1:33629595-33629614 Msa1190560:CDS 45.0%
AACAGTGAGTACAATGGTGG+TGG - chr8_1:33629598-33629617 Msa1190560:CDS 45.0%
CCATCGACCCTGTTCAATTT+CGG + chr8_1:33629654-33629673 None:intergenic 45.0%
AAATTGAACAGGGTCGATGG+AGG - chr8_1:33629654-33629673 Msa1190560:intron 45.0%
!! GGCAACATGTTTTGTTCCTC+CGG + chr8_1:33629775-33629794 None:intergenic 45.0%
!! CATTTACGCTAATGGGCTTG+TGG - chr8_1:33629856-33629875 Msa1190560:intron 45.0%
GCATTGTAATGCAGGTATGC+TGG - chr8_1:33630230-33630249 Msa1190560:intron 45.0%
ACCGAGAGTTTCCATGAGAA+GGG + chr8_1:33630377-33630396 None:intergenic 45.0%
TACCGAGAGTTTCCATGAGA+AGG + chr8_1:33630378-33630397 None:intergenic 45.0%
GAGACGAATAGACTTACCCA+AGG - chr8_1:33630406-33630425 Msa1190560:intron 45.0%
TGGTAAAAGGTGGCATCGTT+TGG - chr8_1:33630559-33630578 Msa1190560:CDS 45.0%
GGTAAAAGGTGGCATCGTTT+GGG - chr8_1:33630560-33630579 Msa1190560:CDS 45.0%
!!! TTTATTATTTTACTTAATTA+AGG - chr8_1:33624114-33624133 Msa1190560:intron 5.0%
!! TAAGAAAATAATTTAATAAT+TGG + chr8_1:33626681-33626700 None:intergenic 5.0%
GGTCCTTTAGGTGCAGTGAT+AGG - chr8_1:33623719-33623738 Msa1190560:three_prime_UTR 50.0%
GGAGTTACTCAAATGGGTGG+TGG - chr8_1:33623761-33623780 Msa1190560:three_prime_UTR 50.0%
TTCAAGCAGGCCCGTATACT+AGG - chr8_1:33624531-33624550 Msa1190560:intron 50.0%
AGGCCCGTATACTAGGAAGT+AGG - chr8_1:33624538-33624557 Msa1190560:intron 50.0%
GGCCCGTATACTAGGAAGTA+GGG - chr8_1:33624539-33624558 Msa1190560:intron 50.0%
CTTGAATGCGTAGCAGGATG+TGG - chr8_1:33624562-33624581 Msa1190560:intron 50.0%
!! ACATCCTGGCCTTGGTGAAT+TGG - chr8_1:33624721-33624740 Msa1190560:intron 50.0%
!! ACTGAAGCATTGGGAGCAGA+TGG - chr8_1:33625154-33625173 Msa1190560:intron 50.0%
!! CTGAAGCATTGGGAGCAGAT+GGG - chr8_1:33625155-33625174 Msa1190560:intron 50.0%
! CAGAGGTACATGGCTGACAT+AGG - chr8_1:33625477-33625496 Msa1190560:intron 50.0%
TGGCTGACATAGGAAAGGCA+TGG - chr8_1:33625487-33625506 Msa1190560:intron 50.0%
!! TGGCCTGTGCTGATTGTTTG+TGG - chr8_1:33625507-33625526 Msa1190560:intron 50.0%
CCTCCACAAACAATCAGCAC+AGG + chr8_1:33625513-33625532 None:intergenic 50.0%
!! CCTGTGCTGATTGTTTGTGG+AGG - chr8_1:33625510-33625529 Msa1190560:intron 50.0%
TGCAATGCCGTGGATAACAG+TGG - chr8_1:33625590-33625609 Msa1190560:intron 50.0%
ACAAAGCGATGCTTGCCTTG+AGG + chr8_1:33626653-33626672 None:intergenic 50.0%
CTGCTGCACGTATGATCTTG+TGG - chr8_1:33627166-33627185 Msa1190560:CDS 50.0%
GTGAACTGTGACCGTTGTTG+TGG - chr8_1:33627197-33627216 Msa1190560:CDS 50.0%
TGGCCCAATAGCACCCAAAT+AGG + chr8_1:33627271-33627290 None:intergenic 50.0%
GCTTCTTATTACTGGGCCCA+CGG - chr8_1:33627338-33627357 Msa1190560:CDS 50.0%
CTATCCAGCTGCCATGCATA+TGG + chr8_1:33627897-33627916 None:intergenic 50.0%
CATATGCATGGCAGCTGGAT+AGG - chr8_1:33627895-33627914 Msa1190560:intron 50.0%
! GGCTGACACACAGTTTTCCA+AGG + chr8_1:33628238-33628257 None:intergenic 50.0%
AACAGGGAAGAGTGGAGATG+AGG + chr8_1:33628327-33628346 None:intergenic 50.0%
ATCTCCACTCTTCCCTGTTG+TGG - chr8_1:33628328-33628347 Msa1190560:intron 50.0%
CATACCACAACAGGGAAGAG+TGG + chr8_1:33628335-33628354 None:intergenic 50.0%
AAGGGTGACAGACTGCTGTT+AGG - chr8_1:33628903-33628922 Msa1190560:intron 50.0%
CATCTTGCCTGAGCAACCAA+GGG + chr8_1:33628934-33628953 None:intergenic 50.0%
ACATCTTGCCTGAGCAACCA+AGG + chr8_1:33628935-33628954 None:intergenic 50.0%
GAAGTGGGCACACAAAAGAG+AGG + chr8_1:33629010-33629029 None:intergenic 50.0%
GAGCACAGCAGCTCAAACAA+TGG - chr8_1:33629525-33629544 Msa1190560:CDS 50.0%
CACAGCAGCTCAAACAATGG+TGG - chr8_1:33629528-33629547 Msa1190560:CDS 50.0%
CAATGGTGGTTCATGGAAGC+TGG - chr8_1:33629542-33629561 Msa1190560:CDS 50.0%
! GCGGCAGAGAAGAGTATATC+TGG - chr8_1:33629628-33629647 Msa1190560:CDS 50.0%
CCGAAATTGAACAGGGTCGA+TGG - chr8_1:33629651-33629670 Msa1190560:CDS 50.0%
CAGTGCTGCATTTGATTGGC+TGG - chr8_1:33629703-33629722 Msa1190560:intron 50.0%
AGTTTCCATGAGAAGGGGTG+GGG + chr8_1:33630371-33630390 None:intergenic 50.0%
GAGTTTCCATGAGAAGGGGT+GGG + chr8_1:33630372-33630391 None:intergenic 50.0%
AGAGTTTCCATGAGAAGGGG+TGG + chr8_1:33630373-33630392 None:intergenic 50.0%
CCGAGAGTTTCCATGAGAAG+GGG + chr8_1:33630376-33630395 None:intergenic 50.0%
CCCCTTCTCATGGAAACTCT+CGG - chr8_1:33630373-33630392 Msa1190560:intron 50.0%
GTAGGGCTTGAATGCGTAGC+AGG - chr8_1:33624556-33624575 Msa1190560:intron 55.0%
CCAGCCCATAAGTAAGCCTG+AGG + chr8_1:33624667-33624686 None:intergenic 55.0%
CCTCAGGCTTACTTATGGGC+TGG - chr8_1:33624664-33624683 Msa1190560:intron 55.0%
GGTGACAAGCATGCACATCC+TGG - chr8_1:33624707-33624726 Msa1190560:intron 55.0%
AAGCATGCACATCCTGGCCT+TGG - chr8_1:33624713-33624732 Msa1190560:intron 55.0%
AGCTCCAATTCACCAAGGCC+AGG + chr8_1:33624728-33624747 None:intergenic 55.0%
TGGGCCCTGAAGTTGAAGAG+AGG + chr8_1:33624978-33624997 None:intergenic 55.0%
!! AAGCATTGGGAGCAGATGGG+TGG - chr8_1:33625158-33625177 Msa1190560:intron 55.0%
GCAACGCAACACATGGAGGT+AGG + chr8_1:33626824-33626843 None:intergenic 55.0%
ACACGCAACGCAACACATGG+AGG + chr8_1:33626828-33626847 None:intergenic 55.0%
TGCACACGCAACGCAACACA+TGG + chr8_1:33626831-33626850 None:intergenic 55.0%
TGCTCCTCAACAGTGGTTGC+TGG - chr8_1:33627308-33627327 Msa1190560:CDS 55.0%
GCTCCTCAACAGTGGTTGCT+GGG - chr8_1:33627309-33627328 Msa1190560:CDS 55.0%
AGACCCAGCAACCACTGTTG+AGG + chr8_1:33627315-33627334 None:intergenic 55.0%
GCGTTACAGTCTCGGATCTG+TGG - chr8_1:33627789-33627808 Msa1190560:intron 55.0%
AGTCTCGGATCTGTGGCTCT+TGG - chr8_1:33627796-33627815 Msa1190560:intron 55.0%
AGCAGTCTGTCACCCTTGCT+TGG + chr8_1:33628900-33628919 None:intergenic 55.0%
GGTGACAGACTGCTGTTAGG+AGG - chr8_1:33628906-33628925 Msa1190560:intron 55.0%
CTGCTGTTAGGAGGTTCCCT+TGG - chr8_1:33628915-33628934 Msa1190560:intron 55.0%
TTTCAACCACCATCGCTGCC+GGG + chr8_1:33629575-33629594 None:intergenic 55.0%
GTTTCAACCACCATCGCTGC+CGG + chr8_1:33629576-33629595 None:intergenic 55.0%
!! CAATGGTGGTGGCAGACATG+CGG - chr8_1:33629609-33629628 Msa1190560:CDS 55.0%
AACAGGGTCGATGGAGGTTG+TGG - chr8_1:33629660-33629679 Msa1190560:intron 55.0%
! TTTGATTGGCTGGCCAGCAG+TGG - chr8_1:33629713-33629732 Msa1190560:intron 55.0%
ATGCAGGTATGCTGGGCTCT+TGG - chr8_1:33630238-33630257 Msa1190560:intron 55.0%
CGTAGCGTGCTCCTCAACAG+TGG - chr8_1:33627301-33627320 Msa1190560:CDS 60.0%
CCAGCTGCCATGCATATGGC+TGG + chr8_1:33627893-33627912 None:intergenic 60.0%
CCAGCCATATGCATGGCAGC+TGG - chr8_1:33627890-33627909 Msa1190560:intron 60.0%
GCATGGCAGCTGGATAGGCA+AGG - chr8_1:33627900-33627919 Msa1190560:intron 60.0%
GGAGGTTCCCTTGGTTGCTC+AGG - chr8_1:33628924-33628943 Msa1190560:intron 60.0%
GGTGGTTCATGGAAGCTGGC+CGG - chr8_1:33629546-33629565 Msa1190560:CDS 60.0%
CACCATTGCCTCACCACTGC+TGG + chr8_1:33629729-33629748 None:intergenic 60.0%
CAGTGGTGAGGCAATGGTGC+CGG - chr8_1:33629730-33629749 Msa1190560:intron 60.0%
!! TGCACGTTGACTCCCACCTC+CGG + chr8_1:33629752-33629771 None:intergenic 60.0%
AGGTGGGAGTCAACGTGCAC+CGG - chr8_1:33629753-33629772 Msa1190560:intron 60.0%
GGGCATACTGTGCTGTCCCT+TGG + chr8_1:33630351-33630370 None:intergenic 60.0%
GTATGCCCCACCCCTTCTCA+TGG - chr8_1:33630363-33630382 Msa1190560:intron 60.0%
ATGGAAGCTGGCCGGAGTCC+CGG - chr8_1:33629554-33629573 Msa1190560:CDS 65.0%
! TTGGCTGGCCAGCAGTGGTG+AGG - chr8_1:33629718-33629737 Msa1190560:intron 65.0%
GGCCAGCAGTGGTGAGGCAA+TGG - chr8_1:33629724-33629743 Msa1190560:intron 65.0%
! TGGTGAGGCAATGGTGCCGG+AGG - chr8_1:33629733-33629752 Msa1190560:intron 65.0%
! TGAGGCAATGGTGCCGGAGG+TGG - chr8_1:33629736-33629755 Msa1190560:intron 65.0%
! GAGGCAATGGTGCCGGAGGT+GGG - chr8_1:33629737-33629756 Msa1190560:intron 65.0%
TGGGAGTCAACGTGCACCGG+AGG - chr8_1:33629756-33629775 Msa1190560:intron 65.0%
CACCATCGCTGCCGGGACTC+CGG + chr8_1:33629568-33629587 None:intergenic 70.0%
CGGAGTCCCGGCAGCGATGG+TGG - chr8_1:33629566-33629585 Msa1190560:CDS 75.0%
! GGCCGGAGTCCCGGCAGCGA+TGG - chr8_1:33629563-33629582 Msa1190560:CDS 80.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 33623613 33630729 33623613 ID=Msa1190560;Name=Msa1190560
chr8_1 mRNA 33623613 33630729 33623613 ID=Msa1190560-mRNA-1;Parent=Msa1190560;Name=Msa1190560-mRNA-1;_AED=0.03;_eAED=0.03;_QI=100|0.88|0.8|1|0.88|0.8|10|291|717
chr8_1 exon 33623613 33624098 33623613 ID=Msa1190560-mRNA-1:exon:11313;Parent=Msa1190560-mRNA-1
chr8_1 exon 33625993 33626220 33625993 ID=Msa1190560-mRNA-1:exon:11312;Parent=Msa1190560-mRNA-1
chr8_1 exon 33626340 33626600 33626340 ID=Msa1190560-mRNA-1:exon:11311;Parent=Msa1190560-mRNA-1
chr8_1 exon 33626972 33627362 33626972 ID=Msa1190560-mRNA-1:exon:11310;Parent=Msa1190560-mRNA-1
chr8_1 exon 33627672 33627799 33627672 ID=Msa1190560-mRNA-1:exon:11309;Parent=Msa1190560-mRNA-1
chr8_1 exon 33627903 33627976 33627903 ID=Msa1190560-mRNA-1:exon:11308;Parent=Msa1190560-mRNA-1
chr8_1 exon 33628679 33628862 33628679 ID=Msa1190560-mRNA-1:exon:11307;Parent=Msa1190560-mRNA-1
chr8_1 exon 33629086 33629231 33629086 ID=Msa1190560-mRNA-1:exon:11306;Parent=Msa1190560-mRNA-1
chr8_1 exon 33629314 33629672 33629314 ID=Msa1190560-mRNA-1:exon:11305;Parent=Msa1190560-mRNA-1
chr8_1 exon 33630442 33630729 33630442 ID=Msa1190560-mRNA-1:exon:11304;Parent=Msa1190560-mRNA-1
chr8_1 five_prime_UTR 33630630 33630729 33630630 ID=Msa1190560-mRNA-1:five_prime_utr;Parent=Msa1190560-mRNA-1
chr8_1 CDS 33630442 33630629 33630442 ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1
chr8_1 CDS 33629314 33629672 33629314 ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1
chr8_1 CDS 33629086 33629231 33629086 ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1
chr8_1 CDS 33628679 33628862 33628679 ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1
chr8_1 CDS 33627903 33627976 33627903 ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1
chr8_1 CDS 33627672 33627799 33627672 ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1
chr8_1 CDS 33626972 33627362 33626972 ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1
chr8_1 CDS 33626340 33626600 33626340 ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1
chr8_1 CDS 33625993 33626220 33625993 ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1
chr8_1 CDS 33623904 33624098 33623904 ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1
chr8_1 three_prime_UTR 33623613 33623903 33623613 ID=Msa1190560-mRNA-1:three_prime_utr;Parent=Msa1190560-mRNA-1
Gene Sequence

>Msa1190560

ATGAGAGGTCCTTTAGGTGCAGTGATAGGAAGCTATACATCAAGTGATGGAGTTACTCAAATGGGTGGTGGAATCATTAAGCATAATAGAAAATGTAGAGATATCACTGCTCTTGTTATCTTTATTGCTTTTTGGATTGCAATGATTGTTAATTCCAGTTTTGGTTTTAACCAAGGAAACCCACTTAGGCTTACTTATGGGCTGGACTACAAAGGTAATGTGTGTGGTGACAAGCATGCACATCCTGGCCTTGGTGAATTGGAGCTCAGATATTGGCAGAATCCTAACCAAGTTTATCAGACTGGATTGAAGGATAGTCAATTCAAACTAGTCAATGCTCGTAGCATATGCTTGTCGGAATGCCCTATTCCTGCTGATGATTCTCTTAAATGGGTGTGTGATTATCCTGAAGGAGATATCCGTCTTTCTATGGAAGATTGGATCAAGAGTGACTATGATTATTATCAGTTCCTTACACCTGATATGAGAAACTCCTCTCTTCAACTTCAGGGCCCATGTTATCCTGTTATATTTCCTAGTGTAAATGTTTACTGGAGTTGCCAGTTTATTGCTCGTCCATCAAACACATCACTGAAGCATTGGGAGCAGATGGGTGGAGTTAGCATCAATGAAGACATTGTTATTGATAAATCAATTCACAAGTCTATTAATTCTCGATCAGCTGTCTTGAAGAGGTACATGGCTGACATAGGAAAGGCATGGCCTGTGCTGATTGTTTGTGGAGGGATTTTACCTCTTTTTCTGTCTGTGATTTGGCTGATGATGATTCGGCATTTTGTTGCTGCAATGCCGTGGATAACAGTGGTTCTCTTTAATGTTCTAATAATAGCAGTCACAATGTTCTTCTACATAAAAGCTGGATGGATTGGAAATGATGCTATTTCTCCCATCATTGGTGAGCATGATCCTTACATTAATGTATTTGGGAGGGAGTTGACTCATCTACGTGTTGTCACTGTACTTATGACCGTTGTCATGGCTGTTTCCGTTCTCACTTCAATTGCTATTGTACGGCGCATCCTTATGGCAACATCTGTCCTCAAGGCAAGCATCGCTTTACAATTTAATTGGTATAATTCTAACTGTCCACAGGTTGCTGCAAAAGTAATAGGAGAAGTTCAAGCACTCATAATTTTTCCAATCATCCCATATGCTATCCTTGCCGTGTTTTACATGATTTGGACTTCAGCTGCTCTCCATTTATTCAGCTCTGGCCAGATTGTTCAGAATGACTGCAACTCTAACTGCTGCACGTATGATCTTGTGGCAAAACGGGTGAACTGTGACCGTTGTTGTGGATATAGCATTCATTACACACCACATATTGGAATTTCCATACTTTTTCACCTATTTGGGTGCTATTGGGCCACACAATTTTTCGTAGCGTGCTCCTCAACAGTGGTTGCTGGGTCTGTTGCTTCTTATTACTGGGCCCACGGTGAAACATCTCATGAAATTCCATTTCTGTCAGTTTTTTCCTCCATGAAAAGGCTTATGCGTTACAGTCTCGGATCTGTGGCTCTTGGTTCTCTGATAGTGTCATTTGTAGAATCAATCCGGTTTCTGCTTGAATCTCTTCGTCGCAAACTAAAAGTATCCAGCCATATGCATGGCAGCTGGATAGGCAAGGCTGCACACCAATCTTCTCAATGTTTTCTCAGGTGTATTGAGTGGACAATCAAATCAGTAAATCGAAATGCTTATATCATGATTGCTATAACTGGCAAAAGTTTCTTTAGCTCGTCTTCTATAGCAACAGATTTGATCATGAATAACATTCTAAAGATTGGGCGTCTTAATGTGATCGGAGATGTCATTTTGTTCCTTGGAAAACTGTGTGTCAGCCTCTCAAGTTCCGTGTTTGCATTCCTCATGTTAGACACACACAAGTACAGTTCTGGCCATAACAAGACCTCATCTCCACTCTTCCCTGTTGTGGTATGCTGGGCTCTTGGATATACTGTTGCAACTCTATTCTTTGCAGTGGTGGAGATGTCAATTGATACAATAGTTCTCTCATTCTGCCAAGATTCTGAAGAACACCAAGGGACAGCACAGTATGCCCCACCCCTTCTCATGGAAACTCTCGGTAACCAAAACGAGACGAATAGACTTACCCAAGGATCACAATGA

Protein sequence

>Msa1190560

MRGPLGAVIGSYTSSDGVTQMGGGIIKHNRKCRDITALVIFIAFWIAMIVNSSFGFNQGNPLRLTYGLDYKGNVCGDKHAHPGLGELELRYWQNPNQVYQTGLKDSQFKLVNARSICLSECPIPADDSLKWVCDYPEGDIRLSMEDWIKSDYDYYQFLTPDMRNSSLQLQGPCYPVIFPSVNVYWSCQFIARPSNTSLKHWEQMGGVSINEDIVIDKSIHKSINSRSAVLKRYMADIGKAWPVLIVCGGILPLFLSVIWLMMIRHFVAAMPWITVVLFNVLIIAVTMFFYIKAGWIGNDAISPIIGEHDPYINVFGRELTHLRVVTVLMTVVMAVSVLTSIAIVRRILMATSVLKASIALQFNWYNSNCPQVAAKVIGEVQALIIFPIIPYAILAVFYMIWTSAALHLFSSGQIVQNDCNSNCCTYDLVAKRVNCDRCCGYSIHYTPHIGISILFHLFGCYWATQFFVACSSTVVAGSVASYYWAHGETSHEIPFLSVFSSMKRLMRYSLGSVALGSLIVSFVESIRFLLESLRRKLKVSSHMHGSWIGKAAHQSSQCFLRCIEWTIKSVNRNAYIMIAITGKSFFSSSSIATDLIMNNILKIGRLNVIGDVILFLGKLCVSLSSSVFAFLMLDTHKYSSGHNKTSSPLFPVVVCWALGYTVATLFFAVVEMSIDTIVLSFCQDSEEHQGTAQYAPPLLMETLGNQNETNRLTQGSQ*