Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1190560 | XP_013445405.1 | 96.653 | 717 | 8 | 1 | 1 | 717 | 1 | 701 | 0.0 | 1423 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1190560 | sp|Q94AN2|CHER1_ARATH | 74.048 | 709 | 166 | 3 | 1 | 708 | 1 | 692 | 0.0 | 1105 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0016440 | Msa1190560 | 0.802187 | 6.318532e-49 | -8.615850e-47 |
Msa0089540 | Msa1190560 | 0.833643 | 4.739278e-56 | -8.615850e-47 |
Msa0104740 | Msa1190560 | 0.810786 | 9.691470e-51 | -8.615850e-47 |
Msa0623310 | Msa1190560 | 0.805327 | 1.408198e-49 | -8.615850e-47 |
Msa0685610 | Msa1190560 | 0.802017 | 6.848306e-49 | -8.615850e-47 |
Msa0834200 | Msa1190560 | -0.812200 | 4.778717e-51 | -8.615850e-47 |
Msa0219840 | Msa1190560 | 0.810159 | 1.323690e-50 | -8.615850e-47 |
Msa0221460 | Msa1190560 | -0.815418 | 9.340855e-52 | -8.615850e-47 |
Msa0228690 | Msa1190560 | 0.811840 | 5.723565e-51 | -8.615850e-47 |
Msa0237180 | Msa1190560 | 0.804021 | 2.638232e-49 | -8.615850e-47 |
Msa0369040 | Msa1190560 | 0.801663 | 8.095753e-49 | -8.615850e-47 |
Msa0378620 | Msa1190560 | -0.800311 | 1.529936e-48 | -8.615850e-47 |
Msa0380590 | Msa1190560 | 0.822903 | 1.846753e-53 | -8.615850e-47 |
Msa0436440 | Msa1190560 | 0.848937 | 4.457287e-60 | -8.615850e-47 |
Msa0476730 | Msa1190560 | -0.809369 | 1.958176e-50 | -8.615850e-47 |
Msa1025220 | Msa1190560 | 0.800039 | 1.737836e-48 | -8.615850e-47 |
Msa1026710 | Msa1190560 | 0.842334 | 2.755930e-58 | -8.615850e-47 |
Msa0244820 | Msa1190560 | -0.825818 | 3.809429e-54 | -8.615850e-47 |
Msa0248430 | Msa1190560 | 0.820060 | 8.373517e-53 | -8.615850e-47 |
Msa0300670 | Msa1190560 | -0.830680 | 2.562535e-55 | -8.615850e-47 |
Msa0315660 | Msa1190560 | 0.805047 | 1.611533e-49 | -8.615850e-47 |
Msa0337760 | Msa1190560 | -0.818986 | 1.472109e-52 | -8.615850e-47 |
Msa1150860 | Msa1190560 | 0.801151 | 1.030876e-48 | -8.615850e-47 |
Msa1190560 | Msa1190770 | 0.804978 | 1.666497e-49 | -8.615850e-47 |
Msa1190560 | Msa1220580 | 0.837593 | 4.743336e-57 | -8.615850e-47 |
Msa1190560 | Msa1245070 | 0.867710 | 1.119341e-65 | -8.615850e-47 |
Msa1190560 | Msa1334560 | 0.835665 | 1.470344e-56 | -8.615850e-47 |
Msa1190560 | Msa1347610 | 0.843398 | 1.436195e-58 | -8.615850e-47 |
Msa1190560 | Msa1379940 | 0.875702 | 2.501149e-68 | -8.615850e-47 |
Msa1190560 | Msa1420830 | 0.856652 | 2.782790e-62 | -8.615850e-47 |
Msa1190560 | Msa1447900 | 0.803679 | 3.106308e-49 | -8.615850e-47 |
Msa0500420 | Msa1190560 | 0.823614 | 1.259616e-53 | -8.615850e-47 |
Msa0526150 | Msa1190560 | 0.820984 | 5.136876e-53 | -8.615850e-47 |
Msa0568290 | Msa1190560 | -0.811821 | 5.780014e-51 | -8.615850e-47 |
Msa0572360 | Msa1190560 | 0.851788 | 7.065287e-61 | -8.615850e-47 |
Msa0846300 | Msa1190560 | -0.819822 | 9.490746e-53 | -8.615850e-47 |
Msa0921860 | Msa1190560 | 0.800225 | 1.592587e-48 | -8.615850e-47 |
Msa0970040 | Msa1190560 | 0.813772 | 2.161488e-51 | -8.615850e-47 |
Msa0970100 | Msa1190560 | 0.834259 | 3.323345e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1190560 | MtrunA17_Chr8g0359941 | 96.234 | 717 | 8 | 1 | 1 | 717 | 1 | 698 | 0.0 | 1417 |
Msa1190560 | MtrunA17_Chr2g0317791 | 78.887 | 701 | 128 | 4 | 15 | 714 | 4 | 685 | 0.0 | 1152 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1190560 | AT3G15380.1 | 74.048 | 709 | 166 | 3 | 1 | 708 | 1 | 692 | 0.0 | 1105 |
Find 177 sgRNAs with CRISPR-Local
Find 466 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATCCTTACATTAATGTATT+TGG | 0.094015 | 8_1:-33627907 | Msa1190560:CDS |
CTGCTGATGATTCTCTTAAA+TGG | 0.121515 | 8_1:-33629468 | Msa1190560:CDS |
GGTCTGTTGCTTCTTATTAC+TGG | 0.145311 | 8_1:-33626990 | Msa1190560:CDS |
CAATGAAACTAGTATAATTT+TGG | 0.183726 | 8_1:-33623887 | Msa1190560:exon |
TTCACCTATTTGGGTGCTAT+TGG | 0.189622 | 8_1:-33627056 | Msa1190560:CDS |
GTTATATTTCCTAGTGTAAA+TGG | 0.218227 | 8_1:-33629313 | Msa1190560:intron |
CCTGAGTCAGACAATTTAAT+TGG | 0.224077 | 8_1:-33627350 | Msa1190560:intron |
TATATATCATTGCTGGTAAA+AGG | 0.236333 | 8_1:-33623774 | Msa1190560:three_prime_UTR |
ACAATGTTCTTCTACATAAA+AGG | 0.242040 | 8_1:-33628678 | Msa1190560:intron |
ATTTACCTCAGGCTTACTTA+TGG | 0.247768 | 8_1:-33629661 | Msa1190560:intron |
TGCTCCTCAACAGTGGTTGC+TGG | 0.264780 | 8_1:-33627012 | Msa1190560:CDS |
ATGATTGTTAATTCCAGTTT+TGG | 0.287468 | 8_1:-33630466 | Msa1190560:CDS |
ATCCTTACATTAATGTATTT+GGG | 0.295980 | 8_1:-33627906 | Msa1190560:CDS |
CTTGGTGTTCTTCAGAATCT+TGG | 0.299971 | 8_1:+33623990 | None:intergenic |
TCTGGCCAGAGCTGAATAAA+TGG | 0.306681 | 8_1:+33627202 | None:intergenic |
TCACCTATTTGGGTGCTATT+GGG | 0.318550 | 8_1:-33627055 | Msa1190560:CDS |
ATGAATAACATTCTAAAGAT+TGG | 0.318670 | 8_1:-33626141 | Msa1190560:CDS |
TTTACCTCAGGCTTACTTAT+GGG | 0.330404 | 8_1:-33629660 | Msa1190560:intron |
AAACTCCTCTCTTCAACTTC+AGG | 0.331107 | 8_1:-33629350 | Msa1190560:CDS |
TTGAAAATGAGAGGTCCTTT+AGG | 0.333028 | 8_1:-33630613 | Msa1190560:exon |
TGCTTGCAGATTGCTATAAC+TGG | 0.335742 | 8_1:-33626207 | Msa1190560:intron |
TCCTTGGTTAAAACCAAAAC+TGG | 0.339259 | 8_1:+33630453 | None:intergenic |
AGAGAGGAGTTTCTCATATC+AGG | 0.340715 | 8_1:+33629361 | None:intergenic |
GTCTGTTGCTTCTTATTACT+GGG | 0.340759 | 8_1:-33626989 | Msa1190560:CDS |
TGGTAAAAGGTGGCATCGTT+TGG | 0.342645 | 8_1:-33623761 | Msa1190560:three_prime_UTR |
TATTGTACGGCGCATCCTTA+TGG | 0.348010 | 8_1:-33627703 | Msa1190560:CDS |
GTGAATTGGAGCTCAGATAT+TGG | 0.360519 | 8_1:-33629585 | Msa1190560:CDS |
AGAGAATCATCAGCAGGAAT+AGG | 0.366569 | 8_1:+33629475 | None:intergenic |
AGAAGATGAAGAAGATGAAA+GGG | 0.373283 | 8_1:+33630690 | None:intergenic |
CTAGTTTCATTGTGATCCTT+GGG | 0.374805 | 8_1:+33623898 | None:intergenic |
ATTCATTACACACCACATAT+TGG | 0.376578 | 8_1:-33627093 | Msa1190560:CDS |
AGGAGATATCCGTCTTTCTA+TGG | 0.376800 | 8_1:-33629428 | Msa1190560:CDS |
ACTAGTTTCATTGTGATCCT+TGG | 0.378958 | 8_1:+33623897 | None:intergenic |
TAAACAAGACATACCACAAC+AGG | 0.384704 | 8_1:+33625979 | None:intergenic |
TTCTCGATCAGCTGTCTTGA+AGG | 0.389221 | 8_1:-33629085 | Msa1190560:intron |
GCATTGTAATGCAGGTATGC+TGG | 0.389620 | 8_1:-33624090 | Msa1190560:intron |
TTTACCTAAGTGGGTTTCCT+TGG | 0.391173 | 8_1:+33630437 | None:intergenic |
TGCTGATGATTCTCTTAAAT+GGG | 0.394676 | 8_1:-33629467 | Msa1190560:CDS |
TGCTTCAGTGATGTGTTTGA+TGG | 0.395457 | 8_1:+33629180 | None:intergenic |
CCAGTCTGATAAACTTGGTT+AGG | 0.395828 | 8_1:+33629556 | None:intergenic |
AGGATAGCATATGGGATGAT+TGG | 0.402260 | 8_1:+33627261 | None:intergenic |
TGGCCCAATAGCACCCAAAT+AGG | 0.408432 | 8_1:+33627052 | None:intergenic |
TCCGTCTTTCTATGGAAGAT+TGG | 0.409237 | 8_1:-33629420 | Msa1190560:CDS |
CAGGTTGCTGCAAAAGTAAT+AGG | 0.411793 | 8_1:-33627309 | Msa1190560:CDS |
TAAGTCTATTCGTCTCGTTT+TGG | 0.414465 | 8_1:+33623921 | None:intergenic |
GATGCTATTTCTCCCATCAT+TGG | 0.415661 | 8_1:-33627937 | Msa1190560:CDS |
ACATCCTGGCCTTGGTGAAT+TGG | 0.416974 | 8_1:-33629599 | Msa1190560:CDS |
TGCTCGTAGCATATGCTTGT+CGG | 0.420426 | 8_1:-33629503 | Msa1190560:CDS |
ATATGTTTATATATCATTGC+TGG | 0.421361 | 8_1:-33623781 | Msa1190560:three_prime_UTR |
GACACACACAAGTACAGTTC+TGG | 0.429035 | 8_1:-33626030 | Msa1190560:CDS |
TGGCCTGTGCTGATTGTTTG+TGG | 0.433385 | 8_1:-33628813 | Msa1190560:CDS |
CTATCCAGCTGCCATGCATA+TGG | 0.435318 | 8_1:+33626426 | None:intergenic |
GAGAATCATCAGCAGGAATA+GGG | 0.439985 | 8_1:+33629476 | None:intergenic |
AGGATCATGCTCACCAATGA+TGG | 0.442969 | 8_1:+33627924 | None:intergenic |
GCTCTCCATTTATTCAGCTC+TGG | 0.443239 | 8_1:-33627207 | Msa1190560:CDS |
TTGATGGACGAGCAATAAAC+TGG | 0.448247 | 8_1:+33629196 | None:intergenic |
GTATGATCTTGTGGCAAAAC+GGG | 0.450111 | 8_1:-33627145 | Msa1190560:CDS |
GAAAGACGGATATCTCCTTC+AGG | 0.450186 | 8_1:+33629433 | None:intergenic |
GGTAAAAGGTGGCATCGTTT+GGG | 0.451565 | 8_1:-33623760 | Msa1190560:three_prime_UTR |
TGAATAACATTCTAAAGATT+GGG | 0.453993 | 8_1:-33626140 | Msa1190560:CDS |
GCTCCTCAACAGTGGTTGCT+GGG | 0.454193 | 8_1:-33627011 | Msa1190560:CDS |
CCTCAGGCTTACTTATGGGC+TGG | 0.458743 | 8_1:-33629656 | Msa1190560:intron |
ATGCAGGTATGCTGGGCTCT+TGG | 0.459555 | 8_1:-33624082 | Msa1190560:intron |
TTATCAATCCATTTGTCAAA+AGG | 0.461992 | 8_1:+33623734 | None:intergenic |
TGATTTGGCTGATGATGATT+CGG | 0.463430 | 8_1:-33628764 | Msa1190560:CDS |
CTCCCAAATACATTAATGTA+AGG | 0.464873 | 8_1:+33627904 | None:intergenic |
GGTCCTTTAGGTGCAGTGAT+AGG | 0.466796 | 8_1:-33630601 | Msa1190560:CDS |
TGAGAAAACATTGAGAAGAT+TGG | 0.466973 | 8_1:+33626390 | None:intergenic |
AAGAACGGAACAGAACTATA+TGG | 0.468231 | 8_1:+33623817 | None:intergenic |
TCACTTCAATTGCTATTGTA+CGG | 0.472187 | 8_1:-33627716 | Msa1190560:CDS |
CTGTGCTGATTGTTTGTGGA+GGG | 0.474787 | 8_1:-33628809 | Msa1190560:CDS |
AACACGGCAAGGATAGCATA+TGG | 0.475523 | 8_1:+33627252 | None:intergenic |
AAGTGATGGAGTTACTCAAA+TGG | 0.475572 | 8_1:-33630566 | Msa1190560:CDS |
TTTACACTAGGAAATATAAC+AGG | 0.477912 | 8_1:+33629316 | None:intergenic |
AACTCCTCTCTTCAACTTCA+GGG | 0.478553 | 8_1:-33629349 | Msa1190560:CDS |
TGCAGTCATTCTGAACAATC+TGG | 0.478612 | 8_1:+33627184 | None:intergenic |
CGTATGATCTTGTGGCAAAA+CGG | 0.482113 | 8_1:-33627146 | Msa1190560:CDS |
TAGAAGATGAAGAAGATGAA+AGG | 0.485444 | 8_1:+33630689 | None:intergenic |
ATCTCCACTCTTCCCTGTTG+TGG | 0.489332 | 8_1:-33625992 | Msa1190560:intron |
AGTCTCGGATCTGTGGCTCT+TGG | 0.489841 | 8_1:-33626524 | Msa1190560:CDS |
CAAACACATCACTGAAGCAT+TGG | 0.492796 | 8_1:-33629176 | Msa1190560:CDS |
CATTGTAATGCAGGTATGCT+GGG | 0.493936 | 8_1:-33624089 | Msa1190560:intron |
CATATGCATGGCAGCTGGAT+AGG | 0.495066 | 8_1:-33626425 | Msa1190560:CDS |
CCTAACCAAGTTTATCAGAC+TGG | 0.497455 | 8_1:-33629556 | Msa1190560:CDS |
TGTCATTTGTAGAATCAATC+CGG | 0.498336 | 8_1:-33626490 | Msa1190560:CDS |
TCAATCCAGTCTGATAAACT+TGG | 0.499093 | 8_1:+33629551 | None:intergenic |
AGTTTATCAGACTGGATTGA+AGG | 0.499374 | 8_1:-33629548 | Msa1190560:CDS |
CCAGCCATATGCATGGCAGC+TGG | 0.499610 | 8_1:-33626430 | Msa1190560:CDS |
GAAGAGATTCAAGCAGAAAC+CGG | 0.501809 | 8_1:+33626471 | None:intergenic |
TACCGAGAGTTTCCATGAGA+AGG | 0.501830 | 8_1:+33623945 | None:intergenic |
ACCGAGAGTTTCCATGAGAA+GGG | 0.504178 | 8_1:+33623946 | None:intergenic |
AGTTTCTCATATCAGGTGTA+AGG | 0.506174 | 8_1:+33629368 | None:intergenic |
CCAGCTGCCATGCATATGGC+TGG | 0.509531 | 8_1:+33626430 | None:intergenic |
AAATCGAAATGCTTATATCA+TGG | 0.509618 | 8_1:-33626339 | Msa1190560:intron |
ACTGAAGCATTGGGAGCAGA+TGG | 0.512261 | 8_1:-33629166 | Msa1190560:CDS |
AAACACATCACTGAAGCATT+GGG | 0.512838 | 8_1:-33629175 | Msa1190560:CDS |
AGTGATGGAGTTACTCAAAT+GGG | 0.513459 | 8_1:-33630565 | Msa1190560:CDS |
AGGCTTATGCGTTACAGTCT+CGG | 0.513581 | 8_1:-33626539 | Msa1190560:CDS |
CTTCCTATCACTGCACCTAA+AGG | 0.514840 | 8_1:+33630598 | None:intergenic |
GTGGAGATGAGGTCTTGTTA+TGG | 0.519430 | 8_1:+33626007 | None:intergenic |
AAGCATGCACATCCTGGCCT+TGG | 0.522945 | 8_1:-33629607 | Msa1190560:CDS |
GTATGCCCCACCCCTTCTCA+TGG | 0.523297 | 8_1:-33623957 | Msa1190560:CDS |
GCTTCTTATTACTGGGCCCA+CGG | 0.531465 | 8_1:-33626982 | Msa1190560:CDS |
AACTCTATTCTTTGCAGTGG+TGG | 0.533282 | 8_1:-33624047 | Msa1190560:CDS |
AGTATGGAAATTCCAATATG+TGG | 0.533807 | 8_1:+33627081 | None:intergenic |
AGCTCCAATTCACCAAGGCC+AGG | 0.534263 | 8_1:+33629595 | None:intergenic |
GTATAATTCTAACTGTCCAC+AGG | 0.536789 | 8_1:-33627328 | Msa1190560:CDS |
TGAGGACAGATGTTGCCATA+AGG | 0.541698 | 8_1:+33627688 | None:intergenic |
TGCAACTCTATTCTTTGCAG+TGG | 0.547698 | 8_1:-33624050 | Msa1190560:CDS |
TAATGCTATTATTGTGAACC+AGG | 0.552831 | 8_1:+33623632 | None:intergenic |
TTACATTAATGTATTTGGGA+GGG | 0.560226 | 8_1:-33627902 | Msa1190560:intron |
TTAACCAAGGAAACCCACTT+AGG | 0.560395 | 8_1:-33630441 | Msa1190560:intron |
AGAGTTTCCATGAGAAGGGG+TGG | 0.563587 | 8_1:+33623950 | None:intergenic |
GGTGACAAGCATGCACATCC+TGG | 0.565304 | 8_1:-33629613 | Msa1190560:CDS |
CAGAGGTACATGGCTGACAT+AGG | 0.565723 | 8_1:-33628843 | Msa1190560:CDS |
AGTTTCCATGAGAAGGGGTG+GGG | 0.567441 | 8_1:+33623952 | None:intergenic |
GGAAATATAACAGGATAACA+TGG | 0.570296 | 8_1:+33629325 | None:intergenic |
CATTTAAGAGAATCATCAGC+AGG | 0.572371 | 8_1:+33629469 | None:intergenic |
TTTGTATTTACAGAGGTACA+TGG | 0.574612 | 8_1:-33628853 | Msa1190560:intron |
CTTACATTAATGTATTTGGG+AGG | 0.574648 | 8_1:-33627903 | Msa1190560:CDS |
TGTACTTATGACCGTTGTCA+TGG | 0.578122 | 8_1:-33627751 | Msa1190560:CDS |
AATGGATTGATAACTTTGTG+AGG | 0.579154 | 8_1:-33623724 | Msa1190560:three_prime_UTR |
ACACGGCAAGGATAGCATAT+GGG | 0.579898 | 8_1:+33627253 | None:intergenic |
GGATCATGCTCACCAATGAT+GGG | 0.580422 | 8_1:+33627925 | None:intergenic |
CCCCTTCTCATGGAAACTCT+CGG | 0.580443 | 8_1:-33623947 | Msa1190560:CDS |
GAGTTTCCATGAGAAGGGGT+GGG | 0.584130 | 8_1:+33623951 | None:intergenic |
AATAGCAATTGAAGTGAGAA+CGG | 0.585718 | 8_1:+33627722 | None:intergenic |
GTTTACTCACCATTTACACT+AGG | 0.587227 | 8_1:+33629304 | None:intergenic |
CTGCTGCACGTATGATCTTG+TGG | 0.587382 | 8_1:-33627154 | Msa1190560:CDS |
CATACCACAACAGGGAAGAG+TGG | 0.590998 | 8_1:+33625988 | None:intergenic |
GCGTTACAGTCTCGGATCTG+TGG | 0.591062 | 8_1:-33626531 | Msa1190560:CDS |
ATTTACAAGCGAAGTAAGAA+CGG | 0.591473 | 8_1:+33623802 | None:intergenic |
GAAGATGAAGAAGATGAAAG+GGG | 0.592928 | 8_1:+33630691 | None:intergenic |
TATGGCAACATCTGTCCTCA+AGG | 0.593789 | 8_1:-33627685 | Msa1190560:CDS |
GTGAACTGTGACCGTTGTTG+TGG | 0.595742 | 8_1:-33627123 | Msa1190560:CDS |
AAATCATGTAAAACACGGCA+AGG | 0.596632 | 8_1:+33627241 | None:intergenic |
CCTGTGCTGATTGTTTGTGG+AGG | 0.596673 | 8_1:-33628810 | Msa1190560:CDS |
CTGAAGCATTGGGAGCAGAT+GGG | 0.598629 | 8_1:-33629165 | Msa1190560:CDS |
ATTGGGCGTCTTAATGTGAT+CGG | 0.598662 | 8_1:-33626123 | Msa1190560:CDS |
GGAGTTACTCAAATGGGTGG+TGG | 0.599196 | 8_1:-33630559 | Msa1190560:CDS |
GGAAGCTATACATCAAGTGA+TGG | 0.601826 | 8_1:-33630580 | Msa1190560:CDS |
CGTAGCGTGCTCCTCAACAG+TGG | 0.603735 | 8_1:-33627019 | Msa1190560:CDS |
AGACCCAGCAACCACTGTTG+AGG | 0.606817 | 8_1:+33627008 | None:intergenic |
CCGAGAGTTTCCATGAGAAG+GGG | 0.611882 | 8_1:+33623947 | None:intergenic |
ACTTACAGATGTTTCACCGT+GGG | 0.613683 | 8_1:+33626966 | None:intergenic |
TCCAATCTTCCATAGAAAGA+CGG | 0.615481 | 8_1:+33629419 | None:intergenic |
AAGCATTGGGAGCAGATGGG+TGG | 0.620511 | 8_1:-33629162 | Msa1190560:CDS |
AGTTGATAATTGAAAATGAG+AGG | 0.623416 | 8_1:-33630622 | Msa1190560:exon |
GCATGGCAGCTGGATAGGCA+AGG | 0.624619 | 8_1:-33626420 | Msa1190560:CDS |
ATGCAAACACGGAACTTGAG+AGG | 0.624706 | 8_1:+33626064 | None:intergenic |
GAAATATAACAGGATAACAT+GGG | 0.624718 | 8_1:+33629326 | None:intergenic |
CCTCCACAAACAATCAGCAC+AGG | 0.628839 | 8_1:+33628810 | None:intergenic |
AACAGGGAAGAGTGGAGATG+AGG | 0.629998 | 8_1:+33625996 | None:intergenic |
TAACATGAGGAATGCAAACA+CGG | 0.630797 | 8_1:+33626053 | None:intergenic |
AAAGTATCCAGCCATATGCA+TGG | 0.638580 | 8_1:-33626437 | Msa1190560:CDS |
ATATCATTGCTGGTAAAAGG+TGG | 0.646618 | 8_1:-33623771 | Msa1190560:three_prime_UTR |
AAGAGAACCACTGTTATCCA+CGG | 0.647239 | 8_1:+33628723 | None:intergenic |
GTACATGGCTGACATAGGAA+AGG | 0.648985 | 8_1:-33628838 | Msa1190560:CDS |
ACAAAGCGATGCTTGCCTTG+AGG | 0.649377 | 8_1:+33627670 | None:intergenic |
TGGGTGTGTGATTATCCTGA+AGG | 0.656934 | 8_1:-33629448 | Msa1190560:CDS |
ACTTATGGGCTGGACTACAA+AGG | 0.659219 | 8_1:-33629646 | Msa1190560:CDS |
AAGATTCTGAAGAACACCAA+GGG | 0.662260 | 8_1:-33623988 | Msa1190560:CDS |
TGGGCCCTGAAGTTGAAGAG+AGG | 0.674834 | 8_1:+33629345 | None:intergenic |
AACGGAACAGAACTATATGG+TGG | 0.676905 | 8_1:+33623820 | None:intergenic |
CAAGATTCTGAAGAACACCA+AGG | 0.690174 | 8_1:-33623989 | Msa1190560:CDS |
AACGGAAACAGCCATGACAA+CGG | 0.690575 | 8_1:+33627740 | None:intergenic |
GACTACAAAGGTAATGTGTG+TGG | 0.691674 | 8_1:-33629634 | Msa1190560:CDS |
TGGCTGACATAGGAAAGGCA+TGG | 0.696862 | 8_1:-33628833 | Msa1190560:CDS |
GAATGCTATATCCACAACAA+CGG | 0.697067 | 8_1:+33627112 | None:intergenic |
GAGACGAATAGACTTACCCA+AGG | 0.697590 | 8_1:-33623914 | Msa1190560:CDS |
AGTCCAAATCATGTAAAACA+CGG | 0.699466 | 8_1:+33627236 | None:intergenic |
ATCTGAGCTCCAATTCACCA+AGG | 0.701858 | 8_1:+33629590 | None:intergenic |
AAACAAGACATACCACAACA+GGG | 0.717527 | 8_1:+33625980 | None:intergenic |
ACTTGTGTGTGTCTAACATG+AGG | 0.718763 | 8_1:+33626040 | None:intergenic |
TGCAATGCCGTGGATAACAG+TGG | 0.725507 | 8_1:-33628730 | Msa1190560:CDS |
AACTTACAGATGTTTCACCG+TGG | 0.729919 | 8_1:+33626965 | None:intergenic |
GATGGAGTTACTCAAATGGG+TGG | 0.738226 | 8_1:-33630562 | Msa1190560:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTATTTGAGATTATTTTTA+AGG | - | chr8_1:33624023-33624042 | Msa1190560:CDS | 10.0% |
!!! | TCATATTTATTTTTTTACAT+CGG | + | chr8_1:33625740-33625759 | None:intergenic | 10.0% |
!! | TATGAACAAAATTATAATTA+TGG | + | chr8_1:33625925-33625944 | None:intergenic | 10.0% |
!!! | TTAAACTATTTTCTTATTTT+TGG | - | chr8_1:33626786-33626805 | Msa1190560:intron | 10.0% |
!!! | AAAAGTAACAATATTTTAAT+TGG | - | chr8_1:33627548-33627567 | Msa1190560:intron | 10.0% |
!! | ATAAATTACATTTAATAACT+TGG | + | chr8_1:33627708-33627727 | None:intergenic | 10.0% |
!! | TTTATAATCATATACTTTAA+TGG | - | chr8_1:33628360-33628379 | Msa1190560:intron | 10.0% |
!!! | AATTTACAAAATTTCTTTTA+TGG | + | chr8_1:33629796-33629815 | None:intergenic | 10.0% |
!! | TAACAGAATAATATAAGAAT+AGG | + | chr8_1:33625972-33625991 | None:intergenic | 15.0% |
!!! | ATATCCTTTATATTCTAAAA+CGG | + | chr8_1:33626028-33626047 | None:intergenic | 15.0% |
!!! | AATATTTTAGTTTCTTTATC+TGG | - | chr8_1:33626283-33626302 | Msa1190560:intron | 15.0% |
!! | TAAGAAAATAGTTTAATGAA+AGG | + | chr8_1:33626782-33626801 | None:intergenic | 15.0% |
!!! | AAAATATTGTTACTTTTGAT+GGG | + | chr8_1:33627545-33627564 | None:intergenic | 15.0% |
!!! | TAAAATATTGTTACTTTTGA+TGG | + | chr8_1:33627546-33627565 | None:intergenic | 15.0% |
!!! | ATGTCTATTTCTAAAATATA+TGG | + | chr8_1:33628391-33628410 | None:intergenic | 15.0% |
!!! | CAACATTTAGATTTTAATTA+AGG | - | chr8_1:33630465-33630484 | Msa1190560:CDS | 15.0% |
!!! | TTGTTATCTTTATTGCTTTT+TGG | - | chr8_1:33623825-33623844 | Msa1190560:three_prime_UTR | 20.0% |
!!! | ATTGCAAATTTTAATACATC+TGG | - | chr8_1:33623973-33623992 | Msa1190560:CDS | 20.0% |
!!! | TTTTAAGGAAAGTTTGTAAA+TGG | - | chr8_1:33624038-33624057 | Msa1190560:CDS | 20.0% |
!! | AAGAGAAAAATTGAAAATCA+TGG | + | chr8_1:33624086-33624105 | None:intergenic | 20.0% |
!!! | TTTTATTTTGACTAATGTAC+TGG | - | chr8_1:33624203-33624222 | Msa1190560:intron | 20.0% |
!!! | TTTATTTTGACTAATGTACT+GGG | - | chr8_1:33624204-33624223 | Msa1190560:intron | 20.0% |
!!! | CTTTTTTTTATATACTATCC+AGG | - | chr8_1:33624392-33624411 | Msa1190560:intron | 20.0% |
!!! | ACATAATTTTCACAACAAAA+AGG | + | chr8_1:33624605-33624624 | None:intergenic | 20.0% |
!!! | TATTTTTCTTTCTAGTTTAC+TGG | - | chr8_1:33625096-33625115 | Msa1190560:intron | 20.0% |
!!! | TAATTTTGTTCATATCTTGT+TGG | - | chr8_1:33625931-33625950 | Msa1190560:intron | 20.0% |
!! | AAACTAAAATATTACTACCT+CGG | + | chr8_1:33626276-33626295 | None:intergenic | 20.0% |
!! | ATCCTTACATTAATGTATTT+GGG | - | chr8_1:33626414-33626433 | Msa1190560:CDS | 20.0% |
!!! | ACTTCAATTTTTTTCACAAT+AGG | + | chr8_1:33626454-33626473 | None:intergenic | 20.0% |
!! | GTCATCAAAATAATGATTTA+TGG | + | chr8_1:33628033-33628052 | None:intergenic | 20.0% |
!! | ACAATATATATAACAATCAG+CGG | + | chr8_1:33628055-33628074 | None:intergenic | 20.0% |
!!! | ATGAATAACATTCTAAAGAT+TGG | - | chr8_1:33628179-33628198 | Msa1190560:intron | 20.0% |
!!! | TGAATAACATTCTAAAGATT+GGG | - | chr8_1:33628180-33628199 | Msa1190560:intron | 20.0% |
!! | TAAACACAGATTTACATTAA+TGG | - | chr8_1:33628512-33628531 | Msa1190560:intron | 20.0% |
!! | AAACACAGATTTACATTAAT+GGG | - | chr8_1:33628513-33628532 | Msa1190560:intron | 20.0% |
!! | GAAAAAAAATTTAACAGCAA+TGG | + | chr8_1:33629196-33629215 | None:intergenic | 20.0% |
!! | AGTGCAAAAGAAAAATTAAT+GGG | + | chr8_1:33629406-33629425 | None:intergenic | 20.0% |
!! | TAGTGCAAAAGAAAAATTAA+TGG | + | chr8_1:33629407-33629426 | None:intergenic | 20.0% |
!!! | AGTAAGAATTAGTCATTTTT+AGG | - | chr8_1:33629473-33629492 | Msa1190560:CDS | 20.0% |
!! | TATATATACATTTACGCTAA+TGG | - | chr8_1:33629848-33629867 | Msa1190560:intron | 20.0% |
!! | ATATATACATTTACGCTAAT+GGG | - | chr8_1:33629849-33629868 | Msa1190560:intron | 20.0% |
!!! | TCAACATTTTTTTGACAAAA+TGG | - | chr8_1:33629881-33629900 | Msa1190560:intron | 20.0% |
!!! | CAACATTTTTTTGACAAAAT+GGG | - | chr8_1:33629882-33629901 | Msa1190560:intron | 20.0% |
!!! | GTTTTAGAATTCACATTTAA+TGG | + | chr8_1:33630186-33630205 | None:intergenic | 20.0% |
!! | TATTGTCAGAACTTTATATT+TGG | - | chr8_1:33630206-33630225 | Msa1190560:intron | 20.0% |
!!! | CAATGAAACTAGTATAATTT+TGG | - | chr8_1:33630433-33630452 | Msa1190560:intron | 20.0% |
!!! | TAGTATAATTTTGGTGATTA+TGG | - | chr8_1:33630442-33630461 | Msa1190560:CDS | 20.0% |
!! | ATATGTTTATATATCATTGC+TGG | - | chr8_1:33630539-33630558 | Msa1190560:CDS | 20.0% |
!!! | AGTTGATAATTGAAAATGAG+AGG | - | chr8_1:33623698-33623717 | Msa1190560:three_prime_UTR | 25.0% |
!! | ATGATTGTTAATTCCAGTTT+TGG | - | chr8_1:33623854-33623873 | Msa1190560:three_prime_UTR | 25.0% |
!!! | TTGAACTTTTTTACCTAAGT+GGG | + | chr8_1:33623895-33623914 | None:intergenic | 25.0% |
!!! | GTTTGGTTTGTTAGTTATAA+TGG | - | chr8_1:33624273-33624292 | Msa1190560:intron | 25.0% |
!!! | AAGCATTTCTGAAACTATTT+GGG | + | chr8_1:33624482-33624501 | None:intergenic | 25.0% |
!!! | TAAGCATTTCTGAAACTATT+TGG | + | chr8_1:33624483-33624502 | None:intergenic | 25.0% |
! | GAAATATAACAGGATAACAT+GGG | + | chr8_1:33624997-33625016 | None:intergenic | 25.0% |
! | TTTACACTAGGAAATATAAC+AGG | + | chr8_1:33625007-33625026 | None:intergenic | 25.0% |
! | GTTATATTTCCTAGTGTAAA+TGG | - | chr8_1:33625007-33625026 | Msa1190560:intron | 25.0% |
! | AAGAGAAGATAAGAAATTGA+AGG | - | chr8_1:33625360-33625379 | Msa1190560:intron | 25.0% |
! | ACAATGTTCTTCTACATAAA+AGG | - | chr8_1:33625642-33625661 | Msa1190560:intron | 25.0% |
! | AGAATAACAAGTTAATCAGA+AGG | + | chr8_1:33625767-33625786 | None:intergenic | 25.0% |
!!! | ATGTAGACAATATTGATTTG+GGG | + | chr8_1:33626112-33626131 | None:intergenic | 25.0% |
!!! | GATGTAGACAATATTGATTT+GGG | + | chr8_1:33626113-33626132 | None:intergenic | 25.0% |
! | AAATGTTAAGTGGAGTATAA+TGG | + | chr8_1:33626145-33626164 | None:intergenic | 25.0% |
! | ATTTGTGACAATGGTTAATA+AGG | - | chr8_1:33626161-33626180 | Msa1190560:CDS | 25.0% |
!! | TAGTTTCTTTATCTGGATTT+TGG | - | chr8_1:33626290-33626309 | Msa1190560:intron | 25.0% |
!! | AGTTTCTTTATCTGGATTTT+GGG | - | chr8_1:33626291-33626310 | Msa1190560:intron | 25.0% |
!! | TTTTCTTACAAATTTTCAGC+TGG | - | chr8_1:33626347-33626366 | Msa1190560:CDS | 25.0% |
! | GATCCTTACATTAATGTATT+TGG | - | chr8_1:33626413-33626432 | Msa1190560:CDS | 25.0% |
! | TTACATTAATGTATTTGGGA+GGG | - | chr8_1:33626418-33626437 | Msa1190560:CDS | 25.0% |
! | AACAAAATGATTTCACTTTC+AGG | - | chr8_1:33626521-33626540 | Msa1190560:CDS | 25.0% |
!! | TGATACATATTTTACCAATG+AGG | + | chr8_1:33627401-33627420 | None:intergenic | 25.0% |
! | AAAAAAGCTTAATCAGTAGA+CGG | + | chr8_1:33627655-33627674 | None:intergenic | 25.0% |
! | AAATCGAAATGCTTATATCA+TGG | - | chr8_1:33627981-33628000 | Msa1190560:intron | 25.0% |
! | AGTTATCAAATTGAGTTTGT+CGG | + | chr8_1:33628587-33628606 | None:intergenic | 25.0% |
!!! | GTTAGAGAAAAAGTTTTATC+TGG | + | chr8_1:33628677-33628696 | None:intergenic | 25.0% |
! | GTTTATTCCTTGTGAAAAAT+CGG | - | chr8_1:33628718-33628737 | Msa1190560:CDS | 25.0% |
! | TTTATTCCTTGTGAAAAATC+GGG | - | chr8_1:33628719-33628738 | Msa1190560:CDS | 25.0% |
!! | ATTGTTAGATCTAGAGTTAA+GGG | + | chr8_1:33628857-33628876 | None:intergenic | 25.0% |
!! | TATTGTTAGATCTAGAGTTA+AGG | + | chr8_1:33628858-33628877 | None:intergenic | 25.0% |
!! | TTTGAAACAAACAACGAAAT+GGG | + | chr8_1:33630073-33630092 | None:intergenic | 25.0% |
! | TATATATCATTGCTGGTAAA+AGG | - | chr8_1:33630546-33630565 | Msa1190560:CDS | 25.0% |
! | TTATCAATCCATTTGTCAAA+AGG | + | chr8_1:33630589-33630608 | None:intergenic | 25.0% |
AGAAGATGAAGAAGATGAAA+GGG | + | chr8_1:33623633-33623652 | None:intergenic | 30.0% | |
TAGAAGATGAAGAAGATGAA+AGG | + | chr8_1:33623634-33623653 | None:intergenic | 30.0% | |
!!! | GTTGAACTTTTTTACCTAAG+TGG | + | chr8_1:33623896-33623915 | None:intergenic | 30.0% |
GTGTATGTTCTTCTGTTATT+TGG | - | chr8_1:33623919-33623938 | Msa1190560:CDS | 30.0% | |
!! | TTATTTGGTGTTTCTGCAAT+TGG | - | chr8_1:33623934-33623953 | Msa1190560:CDS | 30.0% |
ATTACAGTACTAGTTCAAGA+AGG | - | chr8_1:33624237-33624256 | Msa1190560:intron | 30.0% | |
TTACAGTACTAGTTCAAGAA+GGG | - | chr8_1:33624238-33624257 | Msa1190560:intron | 30.0% | |
! | AAGGGATCAATCTTTTTGTT+TGG | - | chr8_1:33624256-33624275 | Msa1190560:intron | 30.0% |
! | ATAATGGCTGGTTAAGAATT+TGG | - | chr8_1:33624289-33624308 | Msa1190560:intron | 30.0% |
TCAAATAAGCAAATTCAAGC+AGG | - | chr8_1:33624518-33624537 | Msa1190560:intron | 30.0% | |
TGCTGATGATTCTCTTAAAT+GGG | - | chr8_1:33624853-33624872 | Msa1190560:intron | 30.0% | |
GGAAATATAACAGGATAACA+TGG | + | chr8_1:33624998-33625017 | None:intergenic | 30.0% | |
AAACATCAATGTGCATCATA+AGG | + | chr8_1:33625046-33625065 | None:intergenic | 30.0% | |
!! | CAACTTCCTACTACTTTTAT+TGG | - | chr8_1:33625269-33625288 | Msa1190560:intron | 30.0% |
AGAACACCAATAAAAGTAGT+AGG | + | chr8_1:33625278-33625297 | None:intergenic | 30.0% | |
TCTGATTGTAACTTTGTACA+AGG | - | chr8_1:33625295-33625314 | Msa1190560:intron | 30.0% | |
AGCGTTGTGTATATTATTGT+AGG | - | chr8_1:33625420-33625439 | Msa1190560:intron | 30.0% | |
! | GTTTCGATTTGTATTTACAG+AGG | - | chr8_1:33625460-33625479 | Msa1190560:intron | 30.0% |
! | TTTGTATTTACAGAGGTACA+TGG | - | chr8_1:33625467-33625486 | Msa1190560:intron | 30.0% |
GTTCTTCTACATAAAAGGTT+AGG | - | chr8_1:33625647-33625666 | Msa1190560:intron | 30.0% | |
! | GACTCTAGAAATACTGAAAT+AGG | + | chr8_1:33625684-33625703 | None:intergenic | 30.0% |
TACAACGATACTTTCATAAG+AGG | + | chr8_1:33625717-33625736 | None:intergenic | 30.0% | |
! | TCTAAAACGGCACATAATTT+GGG | + | chr8_1:33626015-33626034 | None:intergenic | 30.0% |
!! | TTCTAAAACGGCACATAATT+TGG | + | chr8_1:33626016-33626035 | None:intergenic | 30.0% |
!!! | TGTGCCGTTTTAGAATATAA+AGG | - | chr8_1:33626021-33626040 | Msa1190560:CDS | 30.0% |
!! | TGTAGACAATATTGATTTGG+GGG | + | chr8_1:33626111-33626130 | None:intergenic | 30.0% |
! | CGATGTAGACAATATTGATT+TGG | + | chr8_1:33626114-33626133 | None:intergenic | 30.0% |
CTCCCAAATACATTAATGTA+AGG | + | chr8_1:33626419-33626438 | None:intergenic | 30.0% | |
CTTACATTAATGTATTTGGG+AGG | - | chr8_1:33626417-33626436 | Msa1190560:CDS | 30.0% | |
AATAGCAATTGAAGTGAGAA+CGG | + | chr8_1:33626601-33626620 | None:intergenic | 30.0% | |
! | TCACTTCAATTGCTATTGTA+CGG | - | chr8_1:33626604-33626623 | Msa1190560:intron | 30.0% |
TTGTTTAACATTGTGACAAC+TGG | + | chr8_1:33626857-33626876 | None:intergenic | 30.0% | |
AGTCCAAATCATGTAAAACA+CGG | + | chr8_1:33627087-33627106 | None:intergenic | 30.0% | |
ATTCATTACACACCACATAT+TGG | - | chr8_1:33627227-33627246 | Msa1190560:CDS | 30.0% | |
AGTATGGAAATTCCAATATG+TGG | + | chr8_1:33627242-33627261 | None:intergenic | 30.0% | |
!!! | TCCATACTTTTTCACCTATT+TGG | - | chr8_1:33627254-33627273 | Msa1190560:CDS | 30.0% |
!!! | CCATACTTTTTCACCTATTT+GGG | - | chr8_1:33627255-33627274 | Msa1190560:CDS | 30.0% |
! | AACATCTGTAAGTTGCTATT+TGG | - | chr8_1:33627364-33627383 | Msa1190560:intron | 30.0% |
! | TGTCATTTGTAGAATCAATC+CGG | - | chr8_1:33627830-33627849 | Msa1190560:intron | 30.0% |
TGAGAAAACATTGAGAAGAT+TGG | + | chr8_1:33627933-33627952 | None:intergenic | 30.0% | |
! | AATCTTCTCAATGTTTTCTC+AGG | - | chr8_1:33627932-33627951 | Msa1190560:CDS | 30.0% |
ATTAGCACCATACAATTTGA+TGG | + | chr8_1:33628475-33628494 | None:intergenic | 30.0% | |
CAAGGAATAAACATTGAAGT+GGG | + | chr8_1:33628710-33628729 | None:intergenic | 30.0% | |
ACAAGGAATAAACATTGAAG+TGG | + | chr8_1:33628711-33628730 | None:intergenic | 30.0% | |
!! | GAAGTTGTTTTGCGATATTT+AGG | + | chr8_1:33628766-33628785 | None:intergenic | 30.0% |
TCGTCTGCAAAAATTTATTG+AGG | + | chr8_1:33628799-33628818 | None:intergenic | 30.0% | |
TATGACAATAAGTGCTTGTA+CGG | - | chr8_1:33629031-33629050 | Msa1190560:intron | 30.0% | |
ATTAATCAACCTTCGTCAAA+GGG | + | chr8_1:33629141-33629160 | None:intergenic | 30.0% | |
AATTAATCAACCTTCGTCAA+AGG | + | chr8_1:33629142-33629161 | None:intergenic | 30.0% | |
!! | AAAAGTGGTGTTATTGGAAA+GGG | + | chr8_1:33629348-33629367 | None:intergenic | 30.0% |
!! | TTAATGGGTTCGTCTAATTA+TGG | + | chr8_1:33629391-33629410 | None:intergenic | 30.0% |
! | AATTTTTCTTTTGCACTACC+AGG | - | chr8_1:33629409-33629428 | Msa1190560:CDS | 30.0% |
TTCTTACTAATCCAACAAGT+CGG | + | chr8_1:33629461-33629480 | None:intergenic | 30.0% | |
!! | CATTTTTAGGAACAACAAAG+TGG | - | chr8_1:33629486-33629505 | Msa1190560:CDS | 30.0% |
ACTCGTAAACTATCTACATA+AGG | - | chr8_1:33629918-33629937 | Msa1190560:intron | 30.0% | |
CAAGTTCTCAAATCAAACAA+TGG | - | chr8_1:33629977-33629996 | Msa1190560:intron | 30.0% | |
TTGAAACAAACAACGAAATG+GGG | + | chr8_1:33630072-33630091 | None:intergenic | 30.0% | |
!! | CTTTGAAACAAACAACGAAA+TGG | + | chr8_1:33630074-33630093 | None:intergenic | 30.0% |
ATTTACAAGCGAAGTAAGAA+CGG | + | chr8_1:33630521-33630540 | None:intergenic | 30.0% | |
!! | AATGGATTGATAACTTTGTG+AGG | - | chr8_1:33630596-33630615 | Msa1190560:CDS | 30.0% |
!! | GGATTTTGAGAATTTTGAGT+TGG | - | chr8_1:33630617-33630636 | Msa1190560:exon | 30.0% |
!!! | GTTATTTTTTGAGGGAAAAG+GGG | + | chr8_1:33630669-33630688 | None:intergenic | 30.0% |
!!! | GGTTATTTTTTGAGGGAAAA+GGG | + | chr8_1:33630670-33630689 | None:intergenic | 30.0% |
!!! | AGGTTATTTTTTGAGGGAAA+AGG | + | chr8_1:33630671-33630690 | None:intergenic | 30.0% |
! | TTTTCCCTCAAAAAATAACC+TGG | - | chr8_1:33630670-33630689 | Msa1190560:five_prime_UTR | 30.0% |
!!! | TGAACCAGGTTATTTTTTGA+GGG | + | chr8_1:33630677-33630696 | None:intergenic | 30.0% |
TAATGCTATTATTGTGAACC+AGG | + | chr8_1:33630691-33630710 | None:intergenic | 30.0% | |
GAAGATGAAGAAGATGAAAG+GGG | + | chr8_1:33623632-33623651 | None:intergenic | 35.0% | |
TTGAAAATGAGAGGTCCTTT+AGG | - | chr8_1:33623707-33623726 | Msa1190560:three_prime_UTR | 35.0% | |
! | AAGTGATGGAGTTACTCAAA+TGG | - | chr8_1:33623754-33623773 | Msa1190560:three_prime_UTR | 35.0% |
! | AGTGATGGAGTTACTCAAAT+GGG | - | chr8_1:33623755-33623774 | Msa1190560:three_prime_UTR | 35.0% |
!!! | TCCAGTTTTGGTTTTAACCA+AGG | - | chr8_1:33623866-33623885 | Msa1190560:three_prime_UTR | 35.0% |
TCCTTGGTTAAAACCAAAAC+TGG | + | chr8_1:33623870-33623889 | None:intergenic | 35.0% | |
ATCTGGTACTTTCTCTTGAT+GGG | - | chr8_1:33623990-33624009 | Msa1190560:CDS | 35.0% | |
! | ATGGATGCATTTTTCTTCCT+AGG | - | chr8_1:33624057-33624076 | Msa1190560:CDS | 35.0% |
! | TGGATGCATTTTTCTTCCTA+GGG | - | chr8_1:33624058-33624077 | Msa1190560:CDS | 35.0% |
!! | GGTTTGTTAGTTATAATGGC+TGG | - | chr8_1:33624277-33624296 | Msa1190560:intron | 35.0% |
ATAAGCCGTTTATCCAAACA+GGG | + | chr8_1:33624316-33624335 | None:intergenic | 35.0% | |
GCTTATGAACATGTCATAAG+CGG | - | chr8_1:33624442-33624461 | Msa1190560:intron | 35.0% | |
!! | TTTCTGAAACTATTTGGGAG+AGG | + | chr8_1:33624477-33624496 | None:intergenic | 35.0% |
CTAGCAATATGATTTACCTC+AGG | - | chr8_1:33624648-33624667 | Msa1190560:intron | 35.0% | |
ATTTACCTCAGGCTTACTTA+TGG | - | chr8_1:33624659-33624678 | Msa1190560:intron | 35.0% | |
TTTACCTCAGGCTTACTTAT+GGG | - | chr8_1:33624660-33624679 | Msa1190560:intron | 35.0% | |
TCAATCCAGTCTGATAAACT+TGG | + | chr8_1:33624772-33624791 | None:intergenic | 35.0% | |
AGTTTATCAGACTGGATTGA+AGG | - | chr8_1:33624772-33624791 | Msa1190560:intron | 35.0% | |
CATTTAAGAGAATCATCAGC+AGG | + | chr8_1:33624854-33624873 | None:intergenic | 35.0% | |
CTGCTGATGATTCTCTTAAA+TGG | - | chr8_1:33624852-33624871 | Msa1190560:intron | 35.0% | |
TCCAATCTTCCATAGAAAGA+CGG | + | chr8_1:33624904-33624923 | None:intergenic | 35.0% | |
AGTTTCTCATATCAGGTGTA+AGG | + | chr8_1:33624955-33624974 | None:intergenic | 35.0% | |
GTTTACTCACCATTTACACT+AGG | + | chr8_1:33625019-33625038 | None:intergenic | 35.0% | |
TTTCATTACACGTTGTCGAA+AGG | + | chr8_1:33625073-33625092 | None:intergenic | 35.0% | |
TTTCGACAACGTGTAATGAA+AGG | - | chr8_1:33625072-33625091 | Msa1190560:intron | 35.0% | |
TTCGACAACGTGTAATGAAA+GGG | - | chr8_1:33625073-33625092 | Msa1190560:intron | 35.0% | |
! | AAACACATCACTGAAGCATT+GGG | - | chr8_1:33625145-33625164 | Msa1190560:intron | 35.0% |
CAAATCACAGACAGAAAAAG+AGG | + | chr8_1:33625543-33625562 | None:intergenic | 35.0% | |
! | CTCTTTTTCTGTCTGTGATT+TGG | - | chr8_1:33625541-33625560 | Msa1190560:intron | 35.0% |
! | TGATTTGGCTGATGATGATT+CGG | - | chr8_1:33625556-33625575 | Msa1190560:intron | 35.0% |
TAAAAGGTTAGGATCTCTCA+TGG | - | chr8_1:33625658-33625677 | Msa1190560:intron | 35.0% | |
! | TGTTGCTGTTATGTGTATTG+TGG | - | chr8_1:33625852-33625871 | Msa1190560:intron | 35.0% |
!! | TGGAGTATGCTTGATGATTT+TGG | - | chr8_1:33625872-33625891 | Msa1190560:intron | 35.0% |
!! | GGAGTATGCTTGATGATTTT+GGG | - | chr8_1:33625873-33625892 | Msa1190560:intron | 35.0% |
! | GCACATAATTTGGGATAAAC+TGG | + | chr8_1:33626006-33626025 | None:intergenic | 35.0% |
! | AGCGAAACGATACTCATTTT+TGG | + | chr8_1:33626051-33626070 | None:intergenic | 35.0% |
!! | TATTGATTTGGGGGTAGAAT+TGG | + | chr8_1:33626102-33626121 | None:intergenic | 35.0% |
CCATTGTCACAAATGTTAAG+TGG | + | chr8_1:33626155-33626174 | None:intergenic | 35.0% | |
CCACTTAACATTTGTGACAA+TGG | - | chr8_1:33626152-33626171 | Msa1190560:CDS | 35.0% | |
! | CTTACAAATTTTCAGCTGGA+TGG | - | chr8_1:33626351-33626370 | Msa1190560:CDS | 35.0% |
! | AAATTTTCAGCTGGATGGAT+TGG | - | chr8_1:33626356-33626375 | Msa1190560:CDS | 35.0% |
!! | TTCTCTAAAACTTTCTGTGC+TGG | - | chr8_1:33626719-33626738 | Msa1190560:intron | 35.0% |
AAATTGTCTGACTCAGGTAA+TGG | + | chr8_1:33626967-33626986 | None:intergenic | 35.0% | |
CCAATTAAATTGTCTGACTC+AGG | + | chr8_1:33626973-33626992 | None:intergenic | 35.0% | |
CCTGAGTCAGACAATTTAAT+TGG | - | chr8_1:33626970-33626989 | Msa1190560:intron | 35.0% | |
GTATAATTCTAACTGTCCAC+AGG | - | chr8_1:33626992-33627011 | Msa1190560:CDS | 35.0% | |
AAATCATGTAAAACACGGCA+AGG | + | chr8_1:33627082-33627101 | None:intergenic | 35.0% | |
! | TTGCCGTGTTTTACATGATT+TGG | - | chr8_1:33627081-33627100 | Msa1190560:CDS | 35.0% |
GAATGCTATATCCACAACAA+CGG | + | chr8_1:33627211-33627230 | None:intergenic | 35.0% | |
CCCAAATAGGTGAAAAAGTA+TGG | + | chr8_1:33627258-33627277 | None:intergenic | 35.0% | |
! | GTCTGTTGCTTCTTATTACT+GGG | - | chr8_1:33627331-33627350 | Msa1190560:CDS | 35.0% |
AACTGCTTACATCAACAACT+TGG | - | chr8_1:33627489-33627508 | Msa1190560:intron | 35.0% | |
! | ACAGACGCTGGTATTTATTT+TGG | - | chr8_1:33627614-33627633 | Msa1190560:intron | 35.0% |
GAGGAAAAAACTGACAGAAA+TGG | + | chr8_1:33627754-33627773 | None:intergenic | 35.0% | |
!!! | CAGTTTTTTCCTCCATGAAA+AGG | - | chr8_1:33627761-33627780 | Msa1190560:CDS | 35.0% |
TAACATGAGGAATGCAAACA+CGG | + | chr8_1:33628270-33628289 | None:intergenic | 35.0% | |
AAACAAGACATACCACAACA+GGG | + | chr8_1:33628343-33628362 | None:intergenic | 35.0% | |
TAAACAAGACATACCACAAC+AGG | + | chr8_1:33628344-33628363 | None:intergenic | 35.0% | |
CTTTGCACCATCAAATTGTA+TGG | - | chr8_1:33628465-33628484 | Msa1190560:intron | 35.0% | |
TAGATATGCTGTTATGGCAT+TGG | + | chr8_1:33628834-33628853 | None:intergenic | 35.0% | |
TAAGGGTAGATATGCTGTTA+TGG | + | chr8_1:33628840-33628859 | None:intergenic | 35.0% | |
!!! | AGCTTCTTATTTTCCAAGCA+AGG | - | chr8_1:33628884-33628903 | Msa1190560:intron | 35.0% |
!!! | GCTTCTTATTTTCCAAGCAA+GGG | - | chr8_1:33628885-33628904 | Msa1190560:intron | 35.0% |
CACTTATTGTCATAGGAAGT+GGG | + | chr8_1:33629025-33629044 | None:intergenic | 35.0% | |
GTACAAGCACTTATTGTCAT+AGG | + | chr8_1:33629032-33629051 | None:intergenic | 35.0% | |
CAACTAAGAATCTTTCTGTG+TGG | + | chr8_1:33629228-33629247 | None:intergenic | 35.0% | |
CACACAGAAAGATTCTTAGT+TGG | - | chr8_1:33629226-33629245 | Msa1190560:intron | 35.0% | |
GATGAGACGAATTATAAGAC+TGG | - | chr8_1:33629261-33629280 | Msa1190560:intron | 35.0% | |
TCAAGAATTGAAGAAGGACA+AGG | + | chr8_1:33629323-33629342 | None:intergenic | 35.0% | |
!! | AAAGTGGTGTTATTGGAAAG+GGG | + | chr8_1:33629347-33629366 | None:intergenic | 35.0% |
!! | CAAAAGTGGTGTTATTGGAA+AGG | + | chr8_1:33629349-33629368 | None:intergenic | 35.0% |
!! | CTGTTCAAAAGTGGTGTTAT+TGG | + | chr8_1:33629354-33629373 | None:intergenic | 35.0% |
!!! | TTTTGAACAGCTTTAGACCA+TGG | - | chr8_1:33629364-33629383 | Msa1190560:CDS | 35.0% |
AAACTGAACAGTGAGTACAA+TGG | - | chr8_1:33629592-33629611 | Msa1190560:CDS | 35.0% | |
! | TTGATTTGAGAACTTGATGC+CGG | + | chr8_1:33629973-33629992 | None:intergenic | 35.0% |
AATGCAGCTAAGTTAGAAAC+AGG | + | chr8_1:33630013-33630032 | None:intergenic | 35.0% | |
!! | TATTTGGTGCATTGTAATGC+AGG | - | chr8_1:33630222-33630241 | Msa1190560:intron | 35.0% |
! | AAGATTCTGAAGAACACCAA+GGG | - | chr8_1:33630332-33630351 | Msa1190560:intron | 35.0% |
! | TAAGTCTATTCGTCTCGTTT+TGG | + | chr8_1:33630402-33630421 | None:intergenic | 35.0% |
CTAGTTTCATTGTGATCCTT+GGG | + | chr8_1:33630425-33630444 | None:intergenic | 35.0% | |
! | ACTAGTTTCATTGTGATCCT+TGG | + | chr8_1:33630426-33630445 | None:intergenic | 35.0% |
AAGAACGGAACAGAACTATA+TGG | + | chr8_1:33630506-33630525 | None:intergenic | 35.0% | |
ATATCATTGCTGGTAAAAGG+TGG | - | chr8_1:33630549-33630568 | Msa1190560:CDS | 35.0% | |
! | TTGGGTTACCTTTTGACAAA+TGG | - | chr8_1:33630578-33630597 | Msa1190560:CDS | 35.0% |
! | AGGGGATTTTATCATGGTAA+AGG | + | chr8_1:33630651-33630670 | None:intergenic | 35.0% |
!!! | GTGAACCAGGTTATTTTTTG+AGG | + | chr8_1:33630678-33630697 | None:intergenic | 35.0% |
! | AAAGGGGTTAGTAGAGAATG+AGG | + | chr8_1:33623616-33623635 | None:intergenic | 40.0% |
GGAAGCTATACATCAAGTGA+TGG | - | chr8_1:33623740-33623759 | Msa1190560:three_prime_UTR | 40.0% | |
TTAACCAAGGAAACCCACTT+AGG | - | chr8_1:33623879-33623898 | Msa1190560:three_prime_UTR | 40.0% | |
! | TTTACCTAAGTGGGTTTCCT+TGG | + | chr8_1:33623886-33623905 | None:intergenic | 40.0% |
CATCTGGTACTTTCTCTTGA+TGG | - | chr8_1:33623989-33624008 | Msa1190560:CDS | 40.0% | |
! | GGATGCATTTTTCTTCCTAG+GGG | - | chr8_1:33624059-33624078 | Msa1190560:CDS | 40.0% |
ATTGAAAATCATGGACCCCT+AGG | + | chr8_1:33624077-33624096 | None:intergenic | 40.0% | |
TTAAGAATTTGGCCCCTGTT+TGG | - | chr8_1:33624300-33624319 | Msa1190560:intron | 40.0% | |
TAAGCCGTTTATCCAAACAG+GGG | + | chr8_1:33624315-33624334 | None:intergenic | 40.0% | |
GATAAGCCGTTTATCCAAAC+AGG | + | chr8_1:33624317-33624336 | None:intergenic | 40.0% | |
ATACTATCCAGGAGAGCTTA+TGG | - | chr8_1:33624403-33624422 | Msa1190560:intron | 40.0% | |
CTTATTTCCATAAGCTCTCC+TGG | + | chr8_1:33624413-33624432 | None:intergenic | 40.0% | |
AAGCCCTACTTCCTAGTATA+CGG | + | chr8_1:33624545-33624564 | None:intergenic | 40.0% | |
GACTACAAAGGTAATGTGTG+TGG | - | chr8_1:33624686-33624705 | Msa1190560:intron | 40.0% | |
GTGAATTGGAGCTCAGATAT+TGG | - | chr8_1:33624735-33624754 | Msa1190560:intron | 40.0% | |
CCAGTCTGATAAACTTGGTT+AGG | + | chr8_1:33624767-33624786 | None:intergenic | 40.0% | |
CCTAACCAAGTTTATCAGAC+TGG | - | chr8_1:33624764-33624783 | Msa1190560:intron | 40.0% | |
GAGAATCATCAGCAGGAATA+GGG | + | chr8_1:33624847-33624866 | None:intergenic | 40.0% | |
AGAGAATCATCAGCAGGAAT+AGG | + | chr8_1:33624848-33624867 | None:intergenic | 40.0% | |
AGGAGATATCCGTCTTTCTA+TGG | - | chr8_1:33624892-33624911 | Msa1190560:intron | 40.0% | |
TCCGTCTTTCTATGGAAGAT+TGG | - | chr8_1:33624900-33624919 | Msa1190560:intron | 40.0% | |
AGAGAGGAGTTTCTCATATC+AGG | + | chr8_1:33624962-33624981 | None:intergenic | 40.0% | |
AAACTCCTCTCTTCAACTTC+AGG | - | chr8_1:33624970-33624989 | Msa1190560:intron | 40.0% | |
AACTCCTCTCTTCAACTTCA+GGG | - | chr8_1:33624971-33624990 | Msa1190560:intron | 40.0% | |
! | TTGATGGACGAGCAATAAAC+TGG | + | chr8_1:33625127-33625146 | None:intergenic | 40.0% |
TGCTTCAGTGATGTGTTTGA+TGG | + | chr8_1:33625143-33625162 | None:intergenic | 40.0% | |
CAAACACATCACTGAAGCAT+TGG | - | chr8_1:33625144-33625163 | Msa1190560:intron | 40.0% | |
GAAGCAAAAAATTCGTGCCA+GGG | - | chr8_1:33625382-33625401 | Msa1190560:intron | 40.0% | |
CACAACGCTGAATATGCATA+AGG | + | chr8_1:33625409-33625428 | None:intergenic | 40.0% | |
AAGAGAACCACTGTTATCCA+CGG | + | chr8_1:33625600-33625619 | None:intergenic | 40.0% | |
TCTACGTTCTGTGTGTTTCA+TGG | - | chr8_1:33625789-33625808 | Msa1190560:intron | 40.0% | |
CTACGTTCTGTGTGTTTCAT+GGG | - | chr8_1:33625790-33625809 | Msa1190560:intron | 40.0% | |
!! | TCATGGGTTAGACACAAGTT+AGG | - | chr8_1:33625806-33625825 | Msa1190560:intron | 40.0% |
!!! | CAACACTTATTTTGTGACCG+AGG | - | chr8_1:33626256-33626275 | Msa1190560:intron | 40.0% |
!! | GATGCTATTTCTCCCATCAT+TGG | - | chr8_1:33626383-33626402 | Msa1190560:CDS | 40.0% |
TGTACTTATGACCGTTGTCA+TGG | - | chr8_1:33626569-33626588 | Msa1190560:CDS | 40.0% | |
!! | ATTACTTTTGCAGCAACCTG+TGG | + | chr8_1:33627011-33627030 | None:intergenic | 40.0% |
CAGGTTGCTGCAAAAGTAAT+AGG | - | chr8_1:33627011-33627030 | Msa1190560:CDS | 40.0% | |
AGGATAGCATATGGGATGAT+TGG | + | chr8_1:33627062-33627081 | None:intergenic | 40.0% | |
TGCAGTCATTCTGAACAATC+TGG | + | chr8_1:33627139-33627158 | None:intergenic | 40.0% | |
CGTATGATCTTGTGGCAAAA+CGG | - | chr8_1:33627174-33627193 | Msa1190560:CDS | 40.0% | |
GTATGATCTTGTGGCAAAAC+GGG | - | chr8_1:33627175-33627194 | Msa1190560:CDS | 40.0% | |
! | TTCACCTATTTGGGTGCTAT+TGG | - | chr8_1:33627264-33627283 | Msa1190560:CDS | 40.0% |
!! | TCACCTATTTGGGTGCTATT+GGG | - | chr8_1:33627265-33627284 | Msa1190560:CDS | 40.0% |
! | GGTCTGTTGCTTCTTATTAC+TGG | - | chr8_1:33627330-33627349 | Msa1190560:CDS | 40.0% |
ACTTACAGATGTTTCACCGT+GGG | + | chr8_1:33627357-33627376 | None:intergenic | 40.0% | |
AACTTACAGATGTTTCACCG+TGG | + | chr8_1:33627358-33627377 | None:intergenic | 40.0% | |
! | TGGCTCAAGTTTTTCCTCAT+TGG | - | chr8_1:33627384-33627403 | Msa1190560:intron | 40.0% |
TGTTTATCTGTCGCACAATG+AGG | + | chr8_1:33627444-33627463 | None:intergenic | 40.0% | |
! | GTAACGCATAAGCCTTTTCA+TGG | + | chr8_1:33627776-33627795 | None:intergenic | 40.0% |
GAAGAGATTCAAGCAGAAAC+CGG | + | chr8_1:33627852-33627871 | None:intergenic | 40.0% | |
! | AAAGTATCCAGCCATATGCA+TGG | - | chr8_1:33627883-33627902 | Msa1190560:intron | 40.0% |
! | GTTTTCTCAGGTGTATTGAG+TGG | - | chr8_1:33627944-33627963 | Msa1190560:CDS | 40.0% |
TGCTTGCAGATTGCTATAAC+TGG | - | chr8_1:33628113-33628132 | Msa1190560:intron | 40.0% | |
ATTGGGCGTCTTAATGTGAT+CGG | - | chr8_1:33628197-33628216 | Msa1190560:intron | 40.0% | |
!!! | GGAGATGTCATTTTGTTCCT+TGG | - | chr8_1:33628218-33628237 | Msa1190560:intron | 40.0% |
ACTTGTGTGTGTCTAACATG+AGG | + | chr8_1:33628283-33628302 | None:intergenic | 40.0% | |
GAGCTAATGTCGGATCAAAA+TGG | + | chr8_1:33628442-33628461 | None:intergenic | 40.0% | |
TGCAAAGCATGAGCTAATGT+CGG | + | chr8_1:33628452-33628471 | None:intergenic | 40.0% | |
TTCCTTGTGAAAAATCGGGT+TGG | - | chr8_1:33628723-33628742 | Msa1190560:CDS | 40.0% | |
! | TTCCAACCCGATTTTTCACA+AGG | + | chr8_1:33628728-33628747 | None:intergenic | 40.0% |
TTGTGAGCAAGAGTAACATG+AGG | - | chr8_1:33628960-33628979 | Msa1190560:intron | 40.0% | |
!! | GAGAGGTGCTTCAAAATGAA+TGG | + | chr8_1:33628993-33629012 | None:intergenic | 40.0% |
GCACTTATTGTCATAGGAAG+TGG | + | chr8_1:33629026-33629045 | None:intergenic | 40.0% | |
TCACCACCTTGTTCTTCTTT+AGG | - | chr8_1:33629081-33629100 | Msa1190560:intron | 40.0% | |
CACCACCTTGTTCTTCTTTA+GGG | - | chr8_1:33629082-33629101 | Msa1190560:intron | 40.0% | |
TGTAGCCCTAAAGAAGAACA+AGG | + | chr8_1:33629090-33629109 | None:intergenic | 40.0% | |
CTAAGAATCTTTCTGTGTGG+TGG | + | chr8_1:33629225-33629244 | None:intergenic | 40.0% | |
GAAGAAGGACAAGGAAACTT+AGG | + | chr8_1:33629314-33629333 | None:intergenic | 40.0% | |
AGGGGTTCAAGAATTGAAGA+AGG | + | chr8_1:33629329-33629348 | None:intergenic | 40.0% | |
! | GGTCTAAAGCTGTTCAAAAG+TGG | + | chr8_1:33629363-33629382 | None:intergenic | 40.0% |
GTTCGTCTAATTATGGTCCA+TGG | + | chr8_1:33629384-33629403 | None:intergenic | 40.0% | |
! | TCTGGTTTCATATCTACTCC+TGG | + | chr8_1:33629430-33629449 | None:intergenic | 40.0% |
ATATCTGGCCGAAATTGAAC+AGG | - | chr8_1:33629643-33629662 | Msa1190560:CDS | 40.0% | |
TATCTGGCCGAAATTGAACA+GGG | - | chr8_1:33629644-33629663 | Msa1190560:CDS | 40.0% | |
TGTTCAGTGCTGCATTTGAT+TGG | - | chr8_1:33629699-33629718 | Msa1190560:intron | 40.0% | |
!! | ATTTACGCTAATGGGCTTGT+GGG | - | chr8_1:33629857-33629876 | Msa1190560:intron | 40.0% |
CATCTAGTTGATTGTATCGC+CGG | - | chr8_1:33629951-33629970 | Msa1190560:intron | 40.0% | |
CATTGTAATGCAGGTATGCT+GGG | - | chr8_1:33630231-33630250 | Msa1190560:intron | 40.0% | |
TGCAACTCTATTCTTTGCAG+TGG | - | chr8_1:33630270-33630289 | Msa1190560:intron | 40.0% | |
AACTCTATTCTTTGCAGTGG+TGG | - | chr8_1:33630273-33630292 | Msa1190560:intron | 40.0% | |
!! | CTTGGTGTTCTTCAGAATCT+TGG | + | chr8_1:33630333-33630352 | None:intergenic | 40.0% |
! | CAAGATTCTGAAGAACACCA+AGG | - | chr8_1:33630331-33630350 | Msa1190560:intron | 40.0% |
AACGGAACAGAACTATATGG+TGG | + | chr8_1:33630503-33630522 | None:intergenic | 40.0% | |
! | GGGAAAAGGGGATTTTATCA+TGG | + | chr8_1:33630657-33630676 | None:intergenic | 40.0% |
CTTCCTATCACTGCACCTAA+AGG | + | chr8_1:33623725-33623744 | None:intergenic | 45.0% | |
GATGGAGTTACTCAAATGGG+TGG | - | chr8_1:33623758-33623777 | Msa1190560:three_prime_UTR | 45.0% | |
TTGGCCCCTGTTTGGATAAA+CGG | - | chr8_1:33624308-33624327 | Msa1190560:intron | 45.0% | |
AGCCCTACTTCCTAGTATAC+GGG | + | chr8_1:33624544-33624563 | None:intergenic | 45.0% | |
!! | ACTTATGGGCTGGACTACAA+AGG | - | chr8_1:33624674-33624693 | Msa1190560:intron | 45.0% |
ATCTGAGCTCCAATTCACCA+AGG | + | chr8_1:33624733-33624752 | None:intergenic | 45.0% | |
TGCTCGTAGCATATGCTTGT+CGG | - | chr8_1:33624817-33624836 | Msa1190560:intron | 45.0% | |
TGGGTGTGTGATTATCCTGA+AGG | - | chr8_1:33624872-33624891 | Msa1190560:intron | 45.0% | |
GAAAGACGGATATCTCCTTC+AGG | + | chr8_1:33624890-33624909 | None:intergenic | 45.0% | |
TTCTCGATCAGCTGTCTTGA+AGG | - | chr8_1:33625235-33625254 | Msa1190560:intron | 45.0% | |
GGAAGCAAAAAATTCGTGCC+AGG | - | chr8_1:33625381-33625400 | Msa1190560:intron | 45.0% | |
CTGAATATGCATAAGGTCCC+TGG | + | chr8_1:33625402-33625421 | None:intergenic | 45.0% | |
GTACATGGCTGACATAGGAA+AGG | - | chr8_1:33625482-33625501 | Msa1190560:intron | 45.0% | |
!! | CTGTGCTGATTGTTTGTGGA+GGG | - | chr8_1:33625511-33625530 | Msa1190560:intron | 45.0% |
! | ATTTTGTTGCTGCAATGCCG+TGG | - | chr8_1:33625580-33625599 | Msa1190560:intron | 45.0% |
! | TGGGTTAGACACAAGTTAGG+CGG | - | chr8_1:33625809-33625828 | Msa1190560:intron | 45.0% |
GGATCATGCTCACCAATGAT+GGG | + | chr8_1:33626398-33626417 | None:intergenic | 45.0% | |
AGGATCATGCTCACCAATGA+TGG | + | chr8_1:33626399-33626418 | None:intergenic | 45.0% | |
AACGGAAACAGCCATGACAA+CGG | + | chr8_1:33626583-33626602 | None:intergenic | 45.0% | |
TATTGTACGGCGCATCCTTA+TGG | - | chr8_1:33626617-33626636 | Msa1190560:intron | 45.0% | |
TGAGGACAGATGTTGCCATA+AGG | + | chr8_1:33626635-33626654 | None:intergenic | 45.0% | |
TATGGCAACATCTGTCCTCA+AGG | - | chr8_1:33626635-33626654 | Msa1190560:intron | 45.0% | |
ACACGGCAAGGATAGCATAT+GGG | + | chr8_1:33627070-33627089 | None:intergenic | 45.0% | |
AACACGGCAAGGATAGCATA+TGG | + | chr8_1:33627071-33627090 | None:intergenic | 45.0% | |
GCTCTCCATTTATTCAGCTC+TGG | - | chr8_1:33627113-33627132 | Msa1190560:CDS | 45.0% | |
TCTGGCCAGAGCTGAATAAA+TGG | + | chr8_1:33627121-33627140 | None:intergenic | 45.0% | |
GCACGCTACGAAAAATTGTG+TGG | + | chr8_1:33627291-33627310 | None:intergenic | 45.0% | |
!! | GTAGACGGTCTTGTTCAAGT+CGG | + | chr8_1:33627640-33627659 | None:intergenic | 45.0% |
! | ACGCATAAGCCTTTTCATGG+AGG | + | chr8_1:33627773-33627792 | None:intergenic | 45.0% |
AGGCTTATGCGTTACAGTCT+CGG | - | chr8_1:33627781-33627800 | Msa1190560:intron | 45.0% | |
ATGCAAACACGGAACTTGAG+AGG | + | chr8_1:33628259-33628278 | None:intergenic | 45.0% | |
GACACACACAAGTACAGTTC+TGG | - | chr8_1:33628290-33628309 | Msa1190560:intron | 45.0% | |
!! | GTGGAGATGAGGTCTTGTTA+TGG | + | chr8_1:33628316-33628335 | None:intergenic | 45.0% |
GTTTGTCGGAAACAGCTTGA+GGG | + | chr8_1:33628573-33628592 | None:intergenic | 45.0% | |
AGTTTGTCGGAAACAGCTTG+AGG | + | chr8_1:33628574-33628593 | None:intergenic | 45.0% | |
TGAGCAAGAGTAACATGAGG+AGG | - | chr8_1:33628963-33628982 | Msa1190560:intron | 45.0% | |
TGATCATTGAGGCAGCATCA+AGG | + | chr8_1:33629064-33629083 | None:intergenic | 45.0% | |
GAACAAGGTGGTGATCATTG+AGG | + | chr8_1:33629075-33629094 | None:intergenic | 45.0% | |
AGCCCTAAAGAAGAACAAGG+TGG | + | chr8_1:33629087-33629106 | None:intergenic | 45.0% | |
GAAGTAGAACCCTTTGACGA+AGG | - | chr8_1:33629129-33629148 | Msa1190560:CDS | 45.0% | |
AACAAGTCGGTCTCTTTCTC+TGG | + | chr8_1:33629448-33629467 | None:intergenic | 45.0% | |
!! | AGAGAAAGAGACCGACTTGT+TGG | - | chr8_1:33629447-33629466 | Msa1190560:CDS | 45.0% |
TGAGCTGCTGTGCTCTTATT+TGG | + | chr8_1:33629520-33629539 | None:intergenic | 45.0% | |
GCTCAAACAATGGTGGTTCA+TGG | - | chr8_1:33629535-33629554 | Msa1190560:CDS | 45.0% | |
CTGAACAGTGAGTACAATGG+TGG | - | chr8_1:33629595-33629614 | Msa1190560:CDS | 45.0% | |
AACAGTGAGTACAATGGTGG+TGG | - | chr8_1:33629598-33629617 | Msa1190560:CDS | 45.0% | |
CCATCGACCCTGTTCAATTT+CGG | + | chr8_1:33629654-33629673 | None:intergenic | 45.0% | |
AAATTGAACAGGGTCGATGG+AGG | - | chr8_1:33629654-33629673 | Msa1190560:intron | 45.0% | |
!! | GGCAACATGTTTTGTTCCTC+CGG | + | chr8_1:33629775-33629794 | None:intergenic | 45.0% |
!! | CATTTACGCTAATGGGCTTG+TGG | - | chr8_1:33629856-33629875 | Msa1190560:intron | 45.0% |
GCATTGTAATGCAGGTATGC+TGG | - | chr8_1:33630230-33630249 | Msa1190560:intron | 45.0% | |
ACCGAGAGTTTCCATGAGAA+GGG | + | chr8_1:33630377-33630396 | None:intergenic | 45.0% | |
TACCGAGAGTTTCCATGAGA+AGG | + | chr8_1:33630378-33630397 | None:intergenic | 45.0% | |
GAGACGAATAGACTTACCCA+AGG | - | chr8_1:33630406-33630425 | Msa1190560:intron | 45.0% | |
TGGTAAAAGGTGGCATCGTT+TGG | - | chr8_1:33630559-33630578 | Msa1190560:CDS | 45.0% | |
GGTAAAAGGTGGCATCGTTT+GGG | - | chr8_1:33630560-33630579 | Msa1190560:CDS | 45.0% | |
!!! | TTTATTATTTTACTTAATTA+AGG | - | chr8_1:33624114-33624133 | Msa1190560:intron | 5.0% |
!! | TAAGAAAATAATTTAATAAT+TGG | + | chr8_1:33626681-33626700 | None:intergenic | 5.0% |
GGTCCTTTAGGTGCAGTGAT+AGG | - | chr8_1:33623719-33623738 | Msa1190560:three_prime_UTR | 50.0% | |
GGAGTTACTCAAATGGGTGG+TGG | - | chr8_1:33623761-33623780 | Msa1190560:three_prime_UTR | 50.0% | |
TTCAAGCAGGCCCGTATACT+AGG | - | chr8_1:33624531-33624550 | Msa1190560:intron | 50.0% | |
AGGCCCGTATACTAGGAAGT+AGG | - | chr8_1:33624538-33624557 | Msa1190560:intron | 50.0% | |
GGCCCGTATACTAGGAAGTA+GGG | - | chr8_1:33624539-33624558 | Msa1190560:intron | 50.0% | |
CTTGAATGCGTAGCAGGATG+TGG | - | chr8_1:33624562-33624581 | Msa1190560:intron | 50.0% | |
!! | ACATCCTGGCCTTGGTGAAT+TGG | - | chr8_1:33624721-33624740 | Msa1190560:intron | 50.0% |
!! | ACTGAAGCATTGGGAGCAGA+TGG | - | chr8_1:33625154-33625173 | Msa1190560:intron | 50.0% |
!! | CTGAAGCATTGGGAGCAGAT+GGG | - | chr8_1:33625155-33625174 | Msa1190560:intron | 50.0% |
! | CAGAGGTACATGGCTGACAT+AGG | - | chr8_1:33625477-33625496 | Msa1190560:intron | 50.0% |
TGGCTGACATAGGAAAGGCA+TGG | - | chr8_1:33625487-33625506 | Msa1190560:intron | 50.0% | |
!! | TGGCCTGTGCTGATTGTTTG+TGG | - | chr8_1:33625507-33625526 | Msa1190560:intron | 50.0% |
CCTCCACAAACAATCAGCAC+AGG | + | chr8_1:33625513-33625532 | None:intergenic | 50.0% | |
!! | CCTGTGCTGATTGTTTGTGG+AGG | - | chr8_1:33625510-33625529 | Msa1190560:intron | 50.0% |
TGCAATGCCGTGGATAACAG+TGG | - | chr8_1:33625590-33625609 | Msa1190560:intron | 50.0% | |
ACAAAGCGATGCTTGCCTTG+AGG | + | chr8_1:33626653-33626672 | None:intergenic | 50.0% | |
CTGCTGCACGTATGATCTTG+TGG | - | chr8_1:33627166-33627185 | Msa1190560:CDS | 50.0% | |
GTGAACTGTGACCGTTGTTG+TGG | - | chr8_1:33627197-33627216 | Msa1190560:CDS | 50.0% | |
TGGCCCAATAGCACCCAAAT+AGG | + | chr8_1:33627271-33627290 | None:intergenic | 50.0% | |
GCTTCTTATTACTGGGCCCA+CGG | - | chr8_1:33627338-33627357 | Msa1190560:CDS | 50.0% | |
CTATCCAGCTGCCATGCATA+TGG | + | chr8_1:33627897-33627916 | None:intergenic | 50.0% | |
CATATGCATGGCAGCTGGAT+AGG | - | chr8_1:33627895-33627914 | Msa1190560:intron | 50.0% | |
! | GGCTGACACACAGTTTTCCA+AGG | + | chr8_1:33628238-33628257 | None:intergenic | 50.0% |
AACAGGGAAGAGTGGAGATG+AGG | + | chr8_1:33628327-33628346 | None:intergenic | 50.0% | |
ATCTCCACTCTTCCCTGTTG+TGG | - | chr8_1:33628328-33628347 | Msa1190560:intron | 50.0% | |
CATACCACAACAGGGAAGAG+TGG | + | chr8_1:33628335-33628354 | None:intergenic | 50.0% | |
AAGGGTGACAGACTGCTGTT+AGG | - | chr8_1:33628903-33628922 | Msa1190560:intron | 50.0% | |
CATCTTGCCTGAGCAACCAA+GGG | + | chr8_1:33628934-33628953 | None:intergenic | 50.0% | |
ACATCTTGCCTGAGCAACCA+AGG | + | chr8_1:33628935-33628954 | None:intergenic | 50.0% | |
GAAGTGGGCACACAAAAGAG+AGG | + | chr8_1:33629010-33629029 | None:intergenic | 50.0% | |
GAGCACAGCAGCTCAAACAA+TGG | - | chr8_1:33629525-33629544 | Msa1190560:CDS | 50.0% | |
CACAGCAGCTCAAACAATGG+TGG | - | chr8_1:33629528-33629547 | Msa1190560:CDS | 50.0% | |
CAATGGTGGTTCATGGAAGC+TGG | - | chr8_1:33629542-33629561 | Msa1190560:CDS | 50.0% | |
! | GCGGCAGAGAAGAGTATATC+TGG | - | chr8_1:33629628-33629647 | Msa1190560:CDS | 50.0% |
CCGAAATTGAACAGGGTCGA+TGG | - | chr8_1:33629651-33629670 | Msa1190560:CDS | 50.0% | |
CAGTGCTGCATTTGATTGGC+TGG | - | chr8_1:33629703-33629722 | Msa1190560:intron | 50.0% | |
AGTTTCCATGAGAAGGGGTG+GGG | + | chr8_1:33630371-33630390 | None:intergenic | 50.0% | |
GAGTTTCCATGAGAAGGGGT+GGG | + | chr8_1:33630372-33630391 | None:intergenic | 50.0% | |
AGAGTTTCCATGAGAAGGGG+TGG | + | chr8_1:33630373-33630392 | None:intergenic | 50.0% | |
CCGAGAGTTTCCATGAGAAG+GGG | + | chr8_1:33630376-33630395 | None:intergenic | 50.0% | |
CCCCTTCTCATGGAAACTCT+CGG | - | chr8_1:33630373-33630392 | Msa1190560:intron | 50.0% | |
GTAGGGCTTGAATGCGTAGC+AGG | - | chr8_1:33624556-33624575 | Msa1190560:intron | 55.0% | |
CCAGCCCATAAGTAAGCCTG+AGG | + | chr8_1:33624667-33624686 | None:intergenic | 55.0% | |
CCTCAGGCTTACTTATGGGC+TGG | - | chr8_1:33624664-33624683 | Msa1190560:intron | 55.0% | |
GGTGACAAGCATGCACATCC+TGG | - | chr8_1:33624707-33624726 | Msa1190560:intron | 55.0% | |
AAGCATGCACATCCTGGCCT+TGG | - | chr8_1:33624713-33624732 | Msa1190560:intron | 55.0% | |
AGCTCCAATTCACCAAGGCC+AGG | + | chr8_1:33624728-33624747 | None:intergenic | 55.0% | |
TGGGCCCTGAAGTTGAAGAG+AGG | + | chr8_1:33624978-33624997 | None:intergenic | 55.0% | |
!! | AAGCATTGGGAGCAGATGGG+TGG | - | chr8_1:33625158-33625177 | Msa1190560:intron | 55.0% |
GCAACGCAACACATGGAGGT+AGG | + | chr8_1:33626824-33626843 | None:intergenic | 55.0% | |
ACACGCAACGCAACACATGG+AGG | + | chr8_1:33626828-33626847 | None:intergenic | 55.0% | |
TGCACACGCAACGCAACACA+TGG | + | chr8_1:33626831-33626850 | None:intergenic | 55.0% | |
TGCTCCTCAACAGTGGTTGC+TGG | - | chr8_1:33627308-33627327 | Msa1190560:CDS | 55.0% | |
GCTCCTCAACAGTGGTTGCT+GGG | - | chr8_1:33627309-33627328 | Msa1190560:CDS | 55.0% | |
AGACCCAGCAACCACTGTTG+AGG | + | chr8_1:33627315-33627334 | None:intergenic | 55.0% | |
GCGTTACAGTCTCGGATCTG+TGG | - | chr8_1:33627789-33627808 | Msa1190560:intron | 55.0% | |
AGTCTCGGATCTGTGGCTCT+TGG | - | chr8_1:33627796-33627815 | Msa1190560:intron | 55.0% | |
AGCAGTCTGTCACCCTTGCT+TGG | + | chr8_1:33628900-33628919 | None:intergenic | 55.0% | |
GGTGACAGACTGCTGTTAGG+AGG | - | chr8_1:33628906-33628925 | Msa1190560:intron | 55.0% | |
CTGCTGTTAGGAGGTTCCCT+TGG | - | chr8_1:33628915-33628934 | Msa1190560:intron | 55.0% | |
TTTCAACCACCATCGCTGCC+GGG | + | chr8_1:33629575-33629594 | None:intergenic | 55.0% | |
GTTTCAACCACCATCGCTGC+CGG | + | chr8_1:33629576-33629595 | None:intergenic | 55.0% | |
!! | CAATGGTGGTGGCAGACATG+CGG | - | chr8_1:33629609-33629628 | Msa1190560:CDS | 55.0% |
AACAGGGTCGATGGAGGTTG+TGG | - | chr8_1:33629660-33629679 | Msa1190560:intron | 55.0% | |
! | TTTGATTGGCTGGCCAGCAG+TGG | - | chr8_1:33629713-33629732 | Msa1190560:intron | 55.0% |
ATGCAGGTATGCTGGGCTCT+TGG | - | chr8_1:33630238-33630257 | Msa1190560:intron | 55.0% | |
CGTAGCGTGCTCCTCAACAG+TGG | - | chr8_1:33627301-33627320 | Msa1190560:CDS | 60.0% | |
CCAGCTGCCATGCATATGGC+TGG | + | chr8_1:33627893-33627912 | None:intergenic | 60.0% | |
CCAGCCATATGCATGGCAGC+TGG | - | chr8_1:33627890-33627909 | Msa1190560:intron | 60.0% | |
GCATGGCAGCTGGATAGGCA+AGG | - | chr8_1:33627900-33627919 | Msa1190560:intron | 60.0% | |
GGAGGTTCCCTTGGTTGCTC+AGG | - | chr8_1:33628924-33628943 | Msa1190560:intron | 60.0% | |
GGTGGTTCATGGAAGCTGGC+CGG | - | chr8_1:33629546-33629565 | Msa1190560:CDS | 60.0% | |
CACCATTGCCTCACCACTGC+TGG | + | chr8_1:33629729-33629748 | None:intergenic | 60.0% | |
CAGTGGTGAGGCAATGGTGC+CGG | - | chr8_1:33629730-33629749 | Msa1190560:intron | 60.0% | |
!! | TGCACGTTGACTCCCACCTC+CGG | + | chr8_1:33629752-33629771 | None:intergenic | 60.0% |
AGGTGGGAGTCAACGTGCAC+CGG | - | chr8_1:33629753-33629772 | Msa1190560:intron | 60.0% | |
GGGCATACTGTGCTGTCCCT+TGG | + | chr8_1:33630351-33630370 | None:intergenic | 60.0% | |
GTATGCCCCACCCCTTCTCA+TGG | - | chr8_1:33630363-33630382 | Msa1190560:intron | 60.0% | |
ATGGAAGCTGGCCGGAGTCC+CGG | - | chr8_1:33629554-33629573 | Msa1190560:CDS | 65.0% | |
! | TTGGCTGGCCAGCAGTGGTG+AGG | - | chr8_1:33629718-33629737 | Msa1190560:intron | 65.0% |
GGCCAGCAGTGGTGAGGCAA+TGG | - | chr8_1:33629724-33629743 | Msa1190560:intron | 65.0% | |
! | TGGTGAGGCAATGGTGCCGG+AGG | - | chr8_1:33629733-33629752 | Msa1190560:intron | 65.0% |
! | TGAGGCAATGGTGCCGGAGG+TGG | - | chr8_1:33629736-33629755 | Msa1190560:intron | 65.0% |
! | GAGGCAATGGTGCCGGAGGT+GGG | - | chr8_1:33629737-33629756 | Msa1190560:intron | 65.0% |
TGGGAGTCAACGTGCACCGG+AGG | - | chr8_1:33629756-33629775 | Msa1190560:intron | 65.0% | |
CACCATCGCTGCCGGGACTC+CGG | + | chr8_1:33629568-33629587 | None:intergenic | 70.0% | |
CGGAGTCCCGGCAGCGATGG+TGG | - | chr8_1:33629566-33629585 | Msa1190560:CDS | 75.0% | |
! | GGCCGGAGTCCCGGCAGCGA+TGG | - | chr8_1:33629563-33629582 | Msa1190560:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 33623613 | 33630729 | 33623613 | ID=Msa1190560;Name=Msa1190560 |
chr8_1 | mRNA | 33623613 | 33630729 | 33623613 | ID=Msa1190560-mRNA-1;Parent=Msa1190560;Name=Msa1190560-mRNA-1;_AED=0.03;_eAED=0.03;_QI=100|0.88|0.8|1|0.88|0.8|10|291|717 |
chr8_1 | exon | 33623613 | 33624098 | 33623613 | ID=Msa1190560-mRNA-1:exon:11313;Parent=Msa1190560-mRNA-1 |
chr8_1 | exon | 33625993 | 33626220 | 33625993 | ID=Msa1190560-mRNA-1:exon:11312;Parent=Msa1190560-mRNA-1 |
chr8_1 | exon | 33626340 | 33626600 | 33626340 | ID=Msa1190560-mRNA-1:exon:11311;Parent=Msa1190560-mRNA-1 |
chr8_1 | exon | 33626972 | 33627362 | 33626972 | ID=Msa1190560-mRNA-1:exon:11310;Parent=Msa1190560-mRNA-1 |
chr8_1 | exon | 33627672 | 33627799 | 33627672 | ID=Msa1190560-mRNA-1:exon:11309;Parent=Msa1190560-mRNA-1 |
chr8_1 | exon | 33627903 | 33627976 | 33627903 | ID=Msa1190560-mRNA-1:exon:11308;Parent=Msa1190560-mRNA-1 |
chr8_1 | exon | 33628679 | 33628862 | 33628679 | ID=Msa1190560-mRNA-1:exon:11307;Parent=Msa1190560-mRNA-1 |
chr8_1 | exon | 33629086 | 33629231 | 33629086 | ID=Msa1190560-mRNA-1:exon:11306;Parent=Msa1190560-mRNA-1 |
chr8_1 | exon | 33629314 | 33629672 | 33629314 | ID=Msa1190560-mRNA-1:exon:11305;Parent=Msa1190560-mRNA-1 |
chr8_1 | exon | 33630442 | 33630729 | 33630442 | ID=Msa1190560-mRNA-1:exon:11304;Parent=Msa1190560-mRNA-1 |
chr8_1 | five_prime_UTR | 33630630 | 33630729 | 33630630 | ID=Msa1190560-mRNA-1:five_prime_utr;Parent=Msa1190560-mRNA-1 |
chr8_1 | CDS | 33630442 | 33630629 | 33630442 | ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1 |
chr8_1 | CDS | 33629314 | 33629672 | 33629314 | ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1 |
chr8_1 | CDS | 33629086 | 33629231 | 33629086 | ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1 |
chr8_1 | CDS | 33628679 | 33628862 | 33628679 | ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1 |
chr8_1 | CDS | 33627903 | 33627976 | 33627903 | ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1 |
chr8_1 | CDS | 33627672 | 33627799 | 33627672 | ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1 |
chr8_1 | CDS | 33626972 | 33627362 | 33626972 | ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1 |
chr8_1 | CDS | 33626340 | 33626600 | 33626340 | ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1 |
chr8_1 | CDS | 33625993 | 33626220 | 33625993 | ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1 |
chr8_1 | CDS | 33623904 | 33624098 | 33623904 | ID=Msa1190560-mRNA-1:cds;Parent=Msa1190560-mRNA-1 |
chr8_1 | three_prime_UTR | 33623613 | 33623903 | 33623613 | ID=Msa1190560-mRNA-1:three_prime_utr;Parent=Msa1190560-mRNA-1 |
Gene Sequence |
Protein sequence |