Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0834200 | XP_003611333.2 | 96.144 | 389 | 14 | 1 | 1 | 389 | 1 | 388 | 0.0 | 752 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0834200 | sp|Q8W4K5|VAB_ARATH | 37.013 | 308 | 145 | 6 | 105 | 379 | 189 | 480 | 1.38e-26 | 114 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0834200 | G7JXD4 | 96.144 | 389 | 14 | 1 | 1 | 389 | 1 | 388 | 0.0 | 752 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005630 | Msa0834200 | 0.849373 | 3.371895e-60 | -8.615850e-47 |
| Msa0011060 | Msa0834200 | 0.801625 | 8.242494e-49 | -8.615850e-47 |
| Msa0011100 | Msa0834200 | 0.808730 | 2.682442e-50 | -8.615850e-47 |
| Msa0021980 | Msa0834200 | 0.810263 | 1.257345e-50 | -8.615850e-47 |
| Msa0034100 | Msa0834200 | 0.824510 | 7.763599e-54 | -8.615850e-47 |
| Msa0041780 | Msa0834200 | 0.853827 | 1.846633e-61 | -8.615850e-47 |
| Msa0044530 | Msa0834200 | 0.830106 | 3.540535e-55 | -8.615850e-47 |
| Msa0050320 | Msa0834200 | 0.808119 | 3.621582e-50 | -8.615850e-47 |
| Msa0081790 | Msa0834200 | 0.809064 | 2.276047e-50 | -8.615850e-47 |
| Msa0085580 | Msa0834200 | 0.801292 | 9.647041e-49 | -8.615850e-47 |
| Msa0089540 | Msa0834200 | -0.813861 | 2.065630e-51 | -8.615850e-47 |
| Msa0090350 | Msa0834200 | 0.819811 | 9.547527e-53 | -8.615850e-47 |
| Msa0091220 | Msa0834200 | 0.840016 | 1.120530e-57 | -8.615850e-47 |
| Msa0091240 | Msa0834200 | 0.829996 | 3.765267e-55 | -8.615850e-47 |
| Msa0096570 | Msa0834200 | 0.857142 | 1.995935e-62 | -8.615850e-47 |
| Msa0117300 | Msa0834200 | 0.819972 | 8.769163e-53 | -8.615850e-47 |
| Msa0608940 | Msa0834200 | 0.835157 | 1.975575e-56 | -8.615850e-47 |
| Msa0619320 | Msa0834200 | 0.802954 | 4.389871e-49 | -8.615850e-47 |
| Msa0623360 | Msa0834200 | 0.831207 | 1.902924e-55 | -8.615850e-47 |
| Msa0630850 | Msa0834200 | 0.882270 | 1.199433e-70 | -8.615850e-47 |
| Msa0631900 | Msa0834200 | -0.813011 | 3.176264e-51 | -8.615850e-47 |
| Msa0648200 | Msa0834200 | 0.828270 | 9.870738e-55 | -8.615850e-47 |
| Msa0649530 | Msa0834200 | 0.821259 | 4.440062e-53 | -8.615850e-47 |
| Msa0659020 | Msa0834200 | 0.843242 | 1.580820e-58 | -8.615850e-47 |
| Msa0680450 | Msa0834200 | -0.804287 | 2.322801e-49 | -8.615850e-47 |
| Msa0681880 | Msa0834200 | 0.881554 | 2.178908e-70 | -8.615850e-47 |
| Msa0685390 | Msa0834200 | 0.809018 | 2.327499e-50 | -8.615850e-47 |
| Msa0687320 | Msa0834200 | 0.810041 | 1.403712e-50 | -8.615850e-47 |
| Msa0691740 | Msa0834200 | 0.819938 | 8.929114e-53 | -8.615850e-47 |
| Msa0704780 | Msa0834200 | 0.859535 | 3.866813e-63 | -8.615850e-47 |
| Msa0705050 | Msa0834200 | 0.821463 | 3.983896e-53 | -8.615850e-47 |
| Msa0705130 | Msa0834200 | 0.815370 | 9.572639e-52 | -8.615850e-47 |
| Msa0712910 | Msa0834200 | 0.800348 | 1.503077e-48 | -8.615850e-47 |
| Msa0714060 | Msa0834200 | 0.828231 | 1.008271e-54 | -8.615850e-47 |
| Msa0714200 | Msa0834200 | 0.825844 | 3.756050e-54 | -8.615850e-47 |
| Msa0733240 | Msa0834200 | 0.825918 | 3.607028e-54 | -8.615850e-47 |
| Msa0734190 | Msa0834200 | 0.823307 | 1.486343e-53 | -8.615850e-47 |
| Msa0741600 | Msa0834200 | 0.800790 | 1.221657e-48 | -8.615850e-47 |
| Msa0756440 | Msa0834200 | 0.836690 | 8.072047e-57 | -8.615850e-47 |
| Msa0763350 | Msa0834200 | 0.820055 | 8.396141e-53 | -8.615850e-47 |
| Msa0774360 | Msa0834200 | 0.815049 | 1.128199e-51 | -8.615850e-47 |
| Msa0775420 | Msa0834200 | 0.827715 | 1.342272e-54 | -8.615850e-47 |
| Msa0776590 | Msa0834200 | 0.802513 | 5.412973e-49 | -8.615850e-47 |
| Msa0796460 | Msa0834200 | 0.842737 | 2.153379e-58 | -8.615850e-47 |
| Msa0812020 | Msa0834200 | 0.826400 | 2.769566e-54 | -8.615850e-47 |
| Msa0812800 | Msa0834200 | 0.830117 | 3.517624e-55 | -8.615850e-47 |
| Msa0834200 | Msa0834240 | 0.961288 | 1.577036e-119 | -8.615850e-47 |
| Msa0834200 | Msa0835550 | 0.837749 | 4.325216e-57 | -8.615850e-47 |
| Msa0834200 | Msa0846300 | 0.827010 | 1.981109e-54 | -8.615850e-47 |
| Msa0834200 | Msa0852090 | 0.818458 | 1.939689e-52 | -8.615850e-47 |
| Msa0834200 | Msa0853150 | 0.821878 | 3.195131e-53 | -8.615850e-47 |
| Msa0834200 | Msa0861480 | 0.831944 | 1.252207e-55 | -8.615850e-47 |
| Msa0834200 | Msa0861560 | 0.806697 | 7.252051e-50 | -8.615850e-47 |
| Msa0834200 | Msa0863470 | 0.829267 | 5.664773e-55 | -8.615850e-47 |
| Msa0834200 | Msa0871310 | 0.833197 | 6.123915e-56 | -8.615850e-47 |
| Msa0834200 | Msa0927890 | 0.801943 | 7.094282e-49 | -8.615850e-47 |
| Msa0834200 | Msa0961200 | 0.807885 | 4.061922e-50 | -8.615850e-47 |
| Msa0834200 | Msa0967250 | 0.800983 | 1.115904e-48 | -8.615850e-47 |
| Msa0834200 | Msa0967260 | 0.816398 | 5.644480e-52 | -8.615850e-47 |
| Msa0834200 | Msa0999590 | 0.827584 | 1.443113e-54 | -8.615850e-47 |
| Msa0834200 | Msa1026710 | -0.818833 | 1.594315e-52 | -8.615850e-47 |
| Msa0834200 | Msa1031530 | 0.816341 | 5.813398e-52 | -8.615850e-47 |
| Msa0834200 | Msa1038110 | 0.860443 | 2.057823e-63 | -8.615850e-47 |
| Msa0834200 | Msa1041550 | 0.806866 | 6.680369e-50 | -8.615850e-47 |
| Msa0834200 | Msa1071310 | 0.824043 | 9.997265e-54 | -8.615850e-47 |
| Msa0834200 | Msa1071460 | 0.825519 | 4.485885e-54 | -8.615850e-47 |
| Msa0834200 | Msa1089130 | 0.804056 | 2.594095e-49 | -8.615850e-47 |
| Msa0834200 | Msa1093190 | 0.813297 | 2.749370e-51 | -8.615850e-47 |
| Msa0834200 | Msa1101300 | 0.819689 | 1.017724e-52 | -8.615850e-47 |
| Msa0834200 | Msa1101610 | 0.878859 | 1.996212e-69 | -8.615850e-47 |
| Msa0834200 | Msa1104020 | 0.800389 | 1.474938e-48 | -8.615850e-47 |
| Msa0834200 | Msa1129660 | 0.887212 | 1.740069e-72 | -8.615850e-47 |
| Msa0834200 | Msa1133440 | 0.818201 | 2.217761e-52 | -8.615850e-47 |
| Msa0834200 | Msa1147600 | 0.811580 | 6.520724e-51 | -8.615850e-47 |
| Msa0834200 | Msa1150860 | -0.800075 | 1.708179e-48 | -8.615850e-47 |
| Msa0834200 | Msa1182400 | 0.801073 | 1.069612e-48 | -8.615850e-47 |
| Msa0834200 | Msa1190560 | -0.812200 | 4.778717e-51 | -8.615850e-47 |
| Msa0834200 | Msa1194170 | -0.813061 | 3.096491e-51 | -8.615850e-47 |
| Msa0834200 | Msa1199580 | 0.863334 | 2.681465e-64 | -8.615850e-47 |
| Msa0834200 | Msa1204110 | 0.801379 | 9.259773e-49 | -8.615850e-47 |
| Msa0834200 | Msa1207710 | 0.822622 | 2.146742e-53 | -8.615850e-47 |
| Msa0834200 | Msa1207760 | 0.810795 | 9.651494e-51 | -8.615850e-47 |
| Msa0834200 | Msa1216700 | 0.822911 | 1.838519e-53 | -8.615850e-47 |
| Msa0834200 | Msa1216900 | 0.811122 | 8.199103e-51 | -8.615850e-47 |
| Msa0834200 | Msa1223620 | -0.810688 | 1.018076e-50 | -8.615850e-47 |
| Msa0834200 | Msa1229770 | 0.802695 | 4.966028e-49 | -8.615850e-47 |
| Msa0834200 | Msa1230190 | 0.822050 | 2.914349e-53 | -8.615850e-47 |
| Msa0834200 | Msa1240240 | 0.802858 | 4.594390e-49 | -8.615850e-47 |
| Msa0834200 | Msa1243630 | 0.807563 | 4.756220e-50 | -8.615850e-47 |
| Msa0834200 | Msa1244220 | 0.807029 | 6.172164e-50 | -8.615850e-47 |
| Msa0834200 | Msa1257930 | 0.815868 | 7.414729e-52 | -8.615850e-47 |
| Msa0834200 | Msa1257960 | 0.825257 | 5.173806e-54 | -8.615850e-47 |
| Msa0834200 | Msa1259560 | -0.816786 | 4.622189e-52 | -8.615850e-47 |
| Msa0834200 | Msa1262740 | 0.809509 | 1.826861e-50 | -8.615850e-47 |
| Msa0834200 | Msa1263610 | 0.832364 | 9.859763e-56 | -8.615850e-47 |
| Msa0834200 | Msa1272770 | 0.821860 | 3.225442e-53 | -8.615850e-47 |
| Msa0834200 | Msa1286950 | 0.820045 | 8.439471e-53 | -8.615850e-47 |
| Msa0834200 | Msa1295210 | 0.801448 | 8.961048e-49 | -8.615850e-47 |
| Msa0834200 | Msa1298980 | 0.826943 | 2.054812e-54 | -8.615850e-47 |
| Msa0834200 | Msa1299280 | -0.829898 | 3.978704e-55 | -8.615850e-47 |
| Msa0834200 | Msa1301410 | 0.806622 | 7.523445e-50 | -8.615850e-47 |
| Msa0834200 | Msa1319230 | 0.825440 | 4.681310e-54 | -8.615850e-47 |
| Msa0834200 | Msa1320530 | -0.801769 | 7.701016e-49 | -8.615850e-47 |
| Msa0834200 | Msa1328630 | 0.858421 | 8.336684e-63 | -8.615850e-47 |
| Msa0834200 | Msa1328720 | 0.864602 | 1.080474e-64 | -8.615850e-47 |
| Msa0834200 | Msa1329660 | 0.828684 | 7.838726e-55 | -8.615850e-47 |
| Msa0834200 | Msa1334560 | -0.800193 | 1.616251e-48 | -8.615850e-47 |
| Msa0834200 | Msa1339310 | 0.815040 | 1.133293e-51 | -8.615850e-47 |
| Msa0834200 | Msa1342400 | 0.831454 | 1.654095e-55 | -8.615850e-47 |
| Msa0834200 | Msa1347610 | -0.827273 | 1.713567e-54 | -8.615850e-47 |
| Msa0834200 | Msa1348330 | -0.812367 | 4.392847e-51 | -8.615850e-47 |
| Msa0834200 | Msa1352630 | 0.824855 | 6.437960e-54 | -8.615850e-47 |
| Msa0834200 | Msa1353280 | 0.865314 | 6.461084e-65 | -8.615850e-47 |
| Msa0834200 | Msa1368660 | 0.833137 | 6.338023e-56 | -8.615850e-47 |
| Msa0834200 | Msa1379940 | -0.814498 | 1.494535e-51 | -8.615850e-47 |
| Msa0834200 | Msa1381720 | 0.826080 | 3.300226e-54 | -8.615850e-47 |
| Msa0834200 | Msa1388270 | 0.825986 | 3.475312e-54 | -8.615850e-47 |
| Msa0834200 | Msa1400290 | 0.817107 | 3.915025e-52 | -8.615850e-47 |
| Msa0834200 | Msa1401000 | 0.887685 | 1.147927e-72 | -8.615850e-47 |
| Msa0834200 | Msa1405190 | 0.803473 | 3.428108e-49 | -8.615850e-47 |
| Msa0834200 | Msa1419230 | 0.806746 | 7.080855e-50 | -8.615850e-47 |
| Msa0834200 | Msa1423930 | -0.812864 | 3.420091e-51 | -8.615850e-47 |
| Msa0834200 | Msa1427180 | 0.826347 | 2.851092e-54 | -8.615850e-47 |
| Msa0834200 | Msa1428230 | 0.807871 | 4.089818e-50 | -8.615850e-47 |
| Msa0834200 | Msa1428560 | 0.819867 | 9.266937e-53 | -8.615850e-47 |
| Msa0834200 | Msa1431180 | 0.855995 | 4.338317e-62 | -8.615850e-47 |
| Msa0834200 | Msa1432250 | 0.821511 | 3.883788e-53 | -8.615850e-47 |
| Msa0834200 | Msa1442070 | 0.872412 | 3.244447e-67 | -8.615850e-47 |
| Msa0834200 | Msa1446220 | 0.837460 | 5.132262e-57 | -8.615850e-47 |
| Msa0834200 | Msa1450630 | 0.812147 | 4.907390e-51 | -8.615850e-47 |
| Msa0834200 | Msa1450850 | 0.823102 | 1.659644e-53 | -8.615850e-47 |
| Msa0834200 | Msa1459630 | 0.840672 | 7.551182e-58 | -8.615850e-47 |
| Msa0121480 | Msa0834200 | 0.808547 | 2.934913e-50 | -8.615850e-47 |
| Msa0128110 | Msa0834200 | 0.821842 | 3.255895e-53 | -8.615850e-47 |
| Msa0136180 | Msa0834200 | 0.849681 | 2.765762e-60 | -8.615850e-47 |
| Msa0137010 | Msa0834200 | 0.811811 | 5.809277e-51 | -8.615850e-47 |
| Msa0137810 | Msa0834200 | 0.808142 | 3.581588e-50 | -8.615850e-47 |
| Msa0154720 | Msa0834200 | 0.809062 | 2.277882e-50 | -8.615850e-47 |
| Msa0160650 | Msa0834200 | 0.841244 | 5.344034e-58 | -8.615850e-47 |
| Msa0166180 | Msa0834200 | -0.801677 | 8.044532e-49 | -8.615850e-47 |
| Msa0183310 | Msa0834200 | 0.810811 | 9.575217e-51 | -8.615850e-47 |
| Msa0184030 | Msa0834200 | 0.806013 | 1.010662e-49 | -8.615850e-47 |
| Msa0184330 | Msa0834200 | 0.809526 | 1.811595e-50 | -8.615850e-47 |
| Msa0185180 | Msa0834200 | 0.813616 | 2.338633e-51 | -8.615850e-47 |
| Msa0188500 | Msa0834200 | 0.834375 | 3.108175e-56 | -8.615850e-47 |
| Msa0193270 | Msa0834200 | 0.808983 | 2.368278e-50 | -8.615850e-47 |
| Msa0196260 | Msa0834200 | -0.802178 | 6.346903e-49 | -8.615850e-47 |
| Msa0221460 | Msa0834200 | 0.819325 | 1.232613e-52 | -8.615850e-47 |
| Msa0223190 | Msa0834200 | 0.826289 | 2.943105e-54 | -8.615850e-47 |
| Msa0229750 | Msa0834200 | 0.868552 | 5.999993e-66 | -8.615850e-47 |
| Msa0230980 | Msa0834200 | 0.832179 | 1.095915e-55 | -8.615850e-47 |
| Msa0234660 | Msa0834200 | 0.802547 | 5.326256e-49 | -8.615850e-47 |
| Msa0372990 | Msa0834200 | 0.835480 | 1.637782e-56 | -8.615850e-47 |
| Msa0378620 | Msa0834200 | 0.801817 | 7.528750e-49 | -8.615850e-47 |
| Msa0378670 | Msa0834200 | 0.820575 | 6.379129e-53 | -8.615850e-47 |
| Msa0378700 | Msa0834200 | 0.814583 | 1.431106e-51 | -8.615850e-47 |
| Msa0380590 | Msa0834200 | -0.809998 | 1.433839e-50 | -8.615850e-47 |
| Msa0385770 | Msa0834200 | 0.802625 | 5.132415e-49 | -8.615850e-47 |
| Msa0387740 | Msa0834200 | 0.866658 | 2.428144e-65 | -8.615850e-47 |
| Msa0403720 | Msa0834200 | 0.859474 | 4.035462e-63 | -8.615850e-47 |
| Msa0421390 | Msa0834200 | 0.811975 | 5.348979e-51 | -8.615850e-47 |
| Msa0421480 | Msa0834200 | 0.804778 | 1.834734e-49 | -8.615850e-47 |
| Msa0428330 | Msa0834200 | 0.824145 | 9.460901e-54 | -8.615850e-47 |
| Msa0431940 | Msa0834200 | 0.829753 | 4.315373e-55 | -8.615850e-47 |
| Msa0436590 | Msa0834200 | 0.829615 | 4.663148e-55 | -8.615850e-47 |
| Msa0436600 | Msa0834200 | 0.834096 | 3.652383e-56 | -8.615850e-47 |
| Msa0436610 | Msa0834200 | 0.836240 | 1.050932e-56 | -8.615850e-47 |
| Msa0438680 | Msa0834200 | 0.858471 | 8.053325e-63 | -8.615850e-47 |
| Msa0476730 | Msa0834200 | 0.817336 | 3.476792e-52 | -8.615850e-47 |
| Msa0243820 | Msa0834200 | 0.823820 | 1.127612e-53 | -8.615850e-47 |
| Msa0244820 | Msa0834200 | 0.823912 | 1.072504e-53 | -8.615850e-47 |
| Msa0256410 | Msa0834200 | 0.802736 | 4.870610e-49 | -8.615850e-47 |
| Msa0264240 | Msa0834200 | 0.821031 | 5.011750e-53 | -8.615850e-47 |
| Msa0264420 | Msa0834200 | 0.828810 | 7.310813e-55 | -8.615850e-47 |
| Msa0270460 | Msa0834200 | 0.819454 | 1.151483e-52 | -8.615850e-47 |
| Msa0272990 | Msa0834200 | 0.820552 | 6.456818e-53 | -8.615850e-47 |
| Msa0300670 | Msa0834200 | 0.815602 | 8.500774e-52 | -8.615850e-47 |
| Msa0302310 | Msa0834200 | 0.835342 | 1.774002e-56 | -8.615850e-47 |
| Msa0309060 | Msa0834200 | 0.804379 | 2.222592e-49 | -8.615850e-47 |
| Msa0337760 | Msa0834200 | 0.822264 | 2.599493e-53 | -8.615850e-47 |
| Msa0339560 | Msa0834200 | 0.811064 | 8.438502e-51 | -8.615850e-47 |
| Msa0339670 | Msa0834200 | 0.833985 | 3.893757e-56 | -8.615850e-47 |
| Msa0339970 | Msa0834200 | 0.800209 | 1.604849e-48 | -8.615850e-47 |
| Msa0364010 | Msa0834200 | 0.842889 | 1.962788e-58 | -8.615850e-47 |
| Msa0484250 | Msa0834200 | 0.806695 | 7.260939e-50 | -8.615850e-47 |
| Msa0496460 | Msa0834200 | 0.806824 | 6.816882e-50 | -8.615850e-47 |
| Msa0496470 | Msa0834200 | 0.834607 | 2.718304e-56 | -8.615850e-47 |
| Msa0496570 | Msa0834200 | 0.823215 | 1.561572e-53 | -8.615850e-47 |
| Msa0500420 | Msa0834200 | -0.807632 | 4.597854e-50 | -8.615850e-47 |
| Msa0501350 | Msa0834200 | 0.803960 | 2.715803e-49 | -8.615850e-47 |
| Msa0520810 | Msa0834200 | 0.827195 | 1.788972e-54 | -8.615850e-47 |
| Msa0521100 | Msa0834200 | 0.808440 | 3.093456e-50 | -8.615850e-47 |
| Msa0524730 | Msa0834200 | 0.802733 | 4.877896e-49 | -8.615850e-47 |
| Msa0546370 | Msa0834200 | 0.847768 | 9.381997e-60 | -8.615850e-47 |
| Msa0555510 | Msa0834200 | 0.811121 | 8.204402e-51 | -8.615850e-47 |
| Msa0565320 | Msa0834200 | 0.811566 | 6.565508e-51 | -8.615850e-47 |
| Msa0565470 | Msa0834200 | 0.808939 | 2.420321e-50 | -8.615850e-47 |
| Msa0568290 | Msa0834200 | 0.818733 | 1.680562e-52 | -8.615850e-47 |
| Msa0568460 | Msa0834200 | 0.831232 | 1.876354e-55 | -8.615850e-47 |
| Msa0595470 | Msa0834200 | 0.803872 | 2.832713e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0834200 | MtrunA17_Chr5g0399391 | 96.144 | 389 | 14 | 1 | 1 | 389 | 1 | 388 | 0.0 | 752 |
| Msa0834200 | MtrunA17_Chr3g0140081 | 34.456 | 386 | 172 | 10 | 55 | 379 | 1 | 366 | 6.25e-44 | 156 |
| Msa0834200 | MtrunA17_Chr7g0260211 | 36.877 | 301 | 150 | 6 | 113 | 382 | 175 | 466 | 9.30e-35 | 134 |
| Msa0834200 | MtrunA17_Chr4g0019631 | 36.519 | 293 | 157 | 8 | 66 | 346 | 18 | 293 | 5.67e-33 | 125 |
| Msa0834200 | MtrunA17_Chr1g0166381 | 38.793 | 232 | 121 | 3 | 169 | 379 | 226 | 457 | 3.79e-31 | 124 |
| Msa0834200 | MtrunA17_Chr1g0185201 | 39.831 | 236 | 120 | 5 | 169 | 382 | 241 | 476 | 6.31e-30 | 120 |
| Msa0834200 | MtrunA17_Chr1g0204831 | 41.410 | 227 | 112 | 4 | 172 | 379 | 220 | 444 | 2.45e-29 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0834200 | AT4G17350.1 | 56.757 | 407 | 155 | 12 | 7 | 398 | 2 | 402 | 3.97e-133 | 388 |
| Msa0834200 | AT5G47440.1 | 51.970 | 406 | 178 | 9 | 7 | 399 | 2 | 403 | 2.87e-118 | 350 |
| Msa0834200 | AT4G16670.1 | 51.491 | 369 | 157 | 9 | 53 | 401 | 63 | 429 | 7.14e-101 | 306 |
| Msa0834200 | AT4G16670.2 | 53.979 | 289 | 113 | 7 | 53 | 322 | 63 | 350 | 2.50e-79 | 248 |
| Msa0834200 | AT4G16670.3 | 49.371 | 318 | 112 | 8 | 53 | 322 | 63 | 379 | 6.06e-74 | 235 |
| Msa0834200 | AT3G22810.3 | 41.346 | 312 | 142 | 7 | 99 | 379 | 21 | 322 | 9.82e-57 | 189 |
| Msa0834200 | AT3G22810.1 | 41.346 | 312 | 142 | 7 | 99 | 379 | 159 | 460 | 1.36e-55 | 190 |
| Msa0834200 | AT4G14740.3 | 39.172 | 314 | 146 | 8 | 99 | 379 | 25 | 326 | 1.24e-48 | 168 |
| Msa0834200 | AT4G14740.1 | 39.172 | 314 | 146 | 8 | 99 | 379 | 164 | 465 | 2.19e-47 | 168 |
| Msa0834200 | AT4G14740.2 | 39.172 | 314 | 146 | 8 | 99 | 379 | 164 | 465 | 2.19e-47 | 168 |
| Msa0834200 | AT3G22810.2 | 39.552 | 268 | 116 | 6 | 99 | 337 | 159 | 409 | 2.97e-39 | 145 |
| Msa0834200 | AT4G32780.1 | 32.847 | 411 | 207 | 13 | 15 | 379 | 7 | 394 | 4.26e-39 | 145 |
| Msa0834200 | AT5G43870.1 | 39.661 | 295 | 150 | 6 | 104 | 379 | 158 | 443 | 5.44e-39 | 145 |
| Msa0834200 | AT4G32780.2 | 32.847 | 411 | 207 | 13 | 15 | 379 | 26 | 413 | 5.93e-39 | 145 |
| Msa0834200 | AT4G14740.4 | 39.216 | 255 | 112 | 6 | 99 | 322 | 164 | 406 | 3.93e-34 | 131 |
| Msa0834200 | AT3G63300.2 | 36.875 | 320 | 151 | 7 | 105 | 391 | 31 | 332 | 1.17e-27 | 112 |
| Msa0834200 | AT3G63300.1 | 37.013 | 308 | 145 | 6 | 105 | 379 | 189 | 480 | 1.41e-27 | 114 |
| Msa0834200 | AT5G43870.2 | 39.407 | 236 | 117 | 4 | 104 | 322 | 158 | 384 | 1.85e-24 | 104 |
Find 95 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCTGAAGATCTCTATTT+TGG | 0.173414 | 5_4:+7225308 | Msa0834200:CDS |
| ATTATTGTAGGTGTGGTTTA+TGG | 0.231356 | 5_4:+7225239 | Msa0834200:intron |
| GTTGGTGGCTCAGGAATTTC+TGG | 0.231758 | 5_4:-7222973 | None:intergenic |
| TTGTTGCAGGTTACGGAAAA+AGG | 0.263078 | 5_4:+7224799 | Msa0834200:CDS |
| GAACCCATACCCACTTATTC+AGG | 0.282884 | 5_4:+7222517 | Msa0834200:five_prime_UTR |
| AACCAACGTTGTAACTAAAA+AGG | 0.288132 | 5_4:+7222449 | Msa0834200:five_prime_UTR |
| CCCATTCGACAATTAGTAAA+TGG | 0.310053 | 5_4:-7224021 | None:intergenic |
| TTTGAAGATATGAAAGAAAA+TGG | 0.310378 | 5_4:+7222922 | Msa0834200:CDS |
| GTAAATGGTATGAGCTTTCC+AGG | 0.322981 | 5_4:-7224006 | None:intergenic |
| AGTAAAGAAAGAATATTATA+AGG | 0.331718 | 5_4:-7222604 | None:intergenic |
| TAGTGACAATCACTCTAAAT+TGG | 0.333729 | 5_4:+7224200 | Msa0834200:CDS |
| GTAGCAGTTCTTGATTTGTT+TGG | 0.333807 | 5_4:+7225474 | Msa0834200:exon |
| TTCACTACAGGAACTGCTTA+TGG | 0.345714 | 5_4:+7225614 | Msa0834200:three_prime_UTR |
| AATTGTCGAATGGGTACTAT+TGG | 0.349296 | 5_4:+7224030 | Msa0834200:CDS |
| GAATGGGTACTATTGGAAAA+TGG | 0.359539 | 5_4:+7224037 | Msa0834200:CDS |
| TCCAATCCAAGCACATTGAT+TGG | 0.369952 | 5_4:+7222342 | None:intergenic |
| ATCAGTTGAGAGTGAGATAT+AGG | 0.373042 | 5_4:-7222676 | None:intergenic |
| GATTTCTGCGCCTCAATTAA+CGG | 0.383648 | 5_4:+7223122 | Msa0834200:CDS |
| GGGAGATTTGTTGCAGGTTA+CGG | 0.396348 | 5_4:+7224792 | Msa0834200:CDS |
| AGCATCTTATTGTGTTGAAA+TGG | 0.401646 | 5_4:+7224254 | Msa0834200:CDS |
| TAATCCTGAATAAGTGGGTA+TGG | 0.411945 | 5_4:-7222521 | None:intergenic |
| CTTACTGCTGCAGCTGCAAC+AGG | 0.415178 | 5_4:+7224363 | Msa0834200:CDS |
| CCATTTACTAATTGTCGAAT+GGG | 0.421708 | 5_4:+7224021 | Msa0834200:CDS |
| CTCTAAATTGGATGTTGCTA+TGG | 0.425258 | 5_4:+7224212 | Msa0834200:CDS |
| TCAAGAGGTGTTGGTGGCTC+AGG | 0.432946 | 5_4:-7222982 | None:intergenic |
| TCCAAGCACATTGATTGGAT+TGG | 0.434372 | 5_4:+7222347 | Msa0834200:five_prime_UTR |
| ATGCGAGGGAGATTTGTTGC+AGG | 0.435484 | 5_4:+7224786 | Msa0834200:CDS |
| TTACATCAACAAGAAATATC+AGG | 0.443700 | 5_4:+7224935 | Msa0834200:CDS |
| CATTCTGCACTATCAATTGC+CGG | 0.444928 | 5_4:+7224144 | Msa0834200:CDS |
| TGGAGTTCTTGTCTAGATCC+TGG | 0.446623 | 5_4:+7223010 | Msa0834200:CDS |
| TAAGACTCATGAAACATTGC+CGG | 0.447113 | 5_4:+7223095 | Msa0834200:CDS |
| AACATTGGAGAAAAGGATCA+TGG | 0.456120 | 5_4:+7222881 | Msa0834200:CDS |
| AAAACATAATCCTGAATAAG+TGG | 0.459503 | 5_4:-7222527 | None:intergenic |
| ATGTTTCAACATTGGAGAAA+AGG | 0.460245 | 5_4:+7222874 | Msa0834200:CDS |
| GCCAATCCAATCAATGTGCT+TGG | 0.464733 | 5_4:-7222348 | None:intergenic |
| ACCAACACCTCTTGAGCCTA+TGG | 0.465547 | 5_4:+7222990 | Msa0834200:CDS |
| TTCTCTTCATCAAAATTACA+AGG | 0.467306 | 5_4:+7222706 | Msa0834200:five_prime_UTR |
| TGAGGCGCAGAAATCACTTC+CGG | 0.479341 | 5_4:-7223114 | None:intergenic |
| ACCATTTACTAATTGTCGAA+TGG | 0.480098 | 5_4:+7224020 | Msa0834200:CDS |
| CACTTACATCAGAAGCATCA+TGG | 0.482041 | 5_4:+7224063 | Msa0834200:CDS |
| TTCTGCTTCTGAGATTTCAA+AGG | 0.483264 | 5_4:+7223038 | Msa0834200:CDS |
| AATCTCCCTCGCATGGAGAA+TGG | 0.495676 | 5_4:-7224777 | None:intergenic |
| AGCCTCCGCGTTGGCTTCTG+TGG | 0.496691 | 5_4:+7224170 | Msa0834200:CDS |
| TCACTACTACCACCGTACTT+TGG | 0.497870 | 5_4:+7222473 | Msa0834200:five_prime_UTR |
| TCAATAAGTCCCTACGATAG+AGG | 0.499479 | 5_4:+7224697 | Msa0834200:CDS |
| ATGCAAACACTTCTGTTAAG+AGG | 0.499925 | 5_4:+7224088 | Msa0834200:CDS |
| ATAGGCTCAAGAGGTGTTGG+TGG | 0.501332 | 5_4:-7222988 | None:intergenic |
| AATAAGCTTACCGTTAATTG+AGG | 0.502971 | 5_4:-7223132 | None:intergenic |
| TCCATAGGCTCAAGAGGTGT+TGG | 0.507446 | 5_4:-7222991 | None:intergenic |
| AACATCTGACACTCAGAAGC+AGG | 0.508571 | 5_4:-7224745 | None:intergenic |
| TGTATATGTCTCAATAGAGT+AGG | 0.509091 | 5_4:+7225501 | Msa0834200:three_prime_UTR |
| TGTGAGTGGTTAGTAAATGA+TGG | 0.523669 | 5_4:+7222831 | Msa0834200:exon |
| TTCTGCAATTCCTCTATCGT+AGG | 0.525943 | 5_4:-7224707 | None:intergenic |
| CATGGCCATACAGAAAAGAA+AGG | 0.529161 | 5_4:+7225282 | Msa0834200:CDS |
| TCTGCAATTCCTCTATCGTA+GGG | 0.537594 | 5_4:-7224706 | None:intergenic |
| GATGGAATAGAATTTCTACT+TGG | 0.537636 | 5_4:+7225398 | Msa0834200:CDS |
| ATCAAAAGCAAGCACATTGG+AGG | 0.543010 | 5_4:+7225048 | Msa0834200:CDS |
| CTCAGAAGCAGAAAGACTCC+AGG | 0.544523 | 5_4:-7223028 | None:intergenic |
| AAAGTGGTATGTTTCAACAT+TGG | 0.544666 | 5_4:+7222866 | Msa0834200:CDS |
| AATGAAATAATGTTCACTAC+AGG | 0.545114 | 5_4:+7225602 | Msa0834200:three_prime_UTR |
| GTTGAAATGGCAGAGTTAGC+AGG | 0.552664 | 5_4:+7224267 | Msa0834200:CDS |
| TGCAACAAATCTCCCTCGCA+TGG | 0.556607 | 5_4:-7224784 | None:intergenic |
| ACTTACATCAGAAGCATCAT+GGG | 0.561480 | 5_4:+7224064 | Msa0834200:CDS |
| AAGAAATGAAAACCAAAGTA+CGG | 0.564926 | 5_4:-7222485 | None:intergenic |
| GCGGTCGATATTCAAATGCC+AGG | 0.565118 | 5_4:+7224327 | Msa0834200:CDS |
| AAGGATCATGGCAATGGCAA+GGG | 0.568181 | 5_4:+7222893 | Msa0834200:CDS |
| GTAAGAGTCATTAGATCACC+TGG | 0.575371 | 5_4:-7224345 | None:intergenic |
| AATCCTGAATAAGTGGGTAT+GGG | 0.578321 | 5_4:-7222520 | None:intergenic |
| TGTTTCATGTAAGCTTTGAG+AGG | 0.587129 | 5_4:+7224625 | Msa0834200:intron |
| ATGGCCATACAGAAAAGAAA+GGG | 0.589553 | 5_4:+7225283 | Msa0834200:CDS |
| CTATTAAGTATTAACAAACA+TGG | 0.589620 | 5_4:-7225637 | None:intergenic |
| GATCTAGACAAGAACTCCAT+AGG | 0.595247 | 5_4:-7223006 | None:intergenic |
| AAGAACTCCATAGGCTCAAG+AGG | 0.596767 | 5_4:-7222997 | None:intergenic |
| AAAGGATCATGGCAATGGCA+AGG | 0.597294 | 5_4:+7222892 | Msa0834200:CDS |
| AAACATAATCCTGAATAAGT+GGG | 0.599991 | 5_4:-7222526 | None:intergenic |
| TCATTTCAGGTGCATTACGA+TGG | 0.604353 | 5_4:+7224898 | Msa0834200:intron |
| GGAGAAAAGGATCATGGCAA+TGG | 0.608247 | 5_4:+7222887 | Msa0834200:CDS |
| CGCTTCTACTGTTAAGTCTG+CGG | 0.608778 | 5_4:+7224308 | Msa0834200:CDS |
| AAGATCAAAAGCAAGCACAT+TGG | 0.613502 | 5_4:+7225045 | Msa0834200:CDS |
| GAGAACCATTCTCCATGCGA+GGG | 0.616237 | 5_4:+7224772 | Msa0834200:CDS |
| TTTGGCCTCAAAACTGCACA+AGG | 0.625130 | 5_4:+7225326 | Msa0834200:CDS |
| GCCTCAAATCTATGATACTG+TGG | 0.626507 | 5_4:-7225665 | None:intergenic |
| TGAGAACCATTCTCCATGCG+AGG | 0.636940 | 5_4:+7224771 | Msa0834200:CDS |
| TGTGTAACGAAGACTCTGCA+TGG | 0.643429 | 5_4:+7225264 | Msa0834200:CDS |
| TGATGTACAGAATTTGTGAG+TGG | 0.670251 | 5_4:+7222817 | Msa0834200:intron |
| TTGTGTTAAGAAGAATGTGG+TGG | 0.677334 | 5_4:-7222642 | None:intergenic |
| GTTAAGAAGAATGTGGTGGA+AGG | 0.687304 | 5_4:-7222638 | None:intergenic |
| ATCTGACACTCAGAAGCAGG+AGG | 0.692727 | 5_4:-7224742 | None:intergenic |
| ACTTAACAGTAGAAGCGACA+CGG | 0.702641 | 5_4:-7224302 | None:intergenic |
| AACCACAGAAGCCAACGCGG+AGG | 0.719869 | 5_4:-7224172 | None:intergenic |
| AAATGAAAACCAAAGTACGG+TGG | 0.727522 | 5_4:-7222482 | None:intergenic |
| AGCAACCACAGAAGCCAACG+CGG | 0.728782 | 5_4:-7224175 | None:intergenic |
| TGCATTACGATGGAAACATG+TGG | 0.750334 | 5_4:+7224908 | Msa0834200:CDS |
| ATAAGATGCTAAGAGCTGTG+TGG | 0.765894 | 5_4:-7224241 | None:intergenic |
| GTGTTGTGTTAAGAAGAATG+TGG | 0.777204 | 5_4:-7222645 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAAATTCATAGATTTTT+CGG | - | chr5_4:7225447-7225466 | None:intergenic | 10.0% |
| !! | AAGAAAAAAACAAAGTAATA+TGG | - | chr5_4:7222567-7222586 | None:intergenic | 15.0% |
| !! | AGTAAAGAAAGAATATTATA+AGG | - | chr5_4:7222607-7222626 | None:intergenic | 15.0% |
| !! | TCTAAAAAGAAAAAGTTATA+GGG | - | chr5_4:7222737-7222756 | None:intergenic | 15.0% |
| !! | ATCTAAAAAGAAAAAGTTAT+AGG | - | chr5_4:7222738-7222757 | None:intergenic | 15.0% |
| !!! | AGAAAACAATGTTTTAAAAA+CGG | - | chr5_4:7224547-7224566 | None:intergenic | 15.0% |
| !!! | TTGTATTTATCTTAATTTTC+AGG | + | chr5_4:7225014-7225033 | Msa0834200:intron | 15.0% |
| !!! | TGATTTTTACAATTACATAA+TGG | - | chr5_4:7225172-7225191 | None:intergenic | 15.0% |
| !! | ATCAAAGTTTATAAATCAGA+TGG | + | chr5_4:7222756-7222775 | Msa0834200:intron | 20.0% |
| !! | TTTGAAGATATGAAAGAAAA+TGG | + | chr5_4:7222922-7222941 | Msa0834200:CDS | 20.0% |
| !! | TCAAATAAATCAATCCAAAT+AGG | - | chr5_4:7223193-7223212 | None:intergenic | 20.0% |
| !! | AAGTATTTGTGAGATTATTT+AGG | - | chr5_4:7223583-7223602 | None:intergenic | 20.0% |
| !! | ATTAAGTTATTTATCCAAAC+AGG | + | chr5_4:7223823-7223842 | Msa0834200:intron | 20.0% |
| !! | TTAAGTTATTTATCCAAACA+GGG | + | chr5_4:7223824-7223843 | Msa0834200:intron | 20.0% |
| !!! | TAGTCTTTTGCTTAATTTTT+AGG | - | chr5_4:7223881-7223900 | None:intergenic | 20.0% |
| !!! | ACCTCTTAAATTTTGTTTTT+AGG | - | chr5_4:7224975-7224994 | None:intergenic | 20.0% |
| !!! | AAAATTTAAGAGGTGAATTT+TGG | + | chr5_4:7224981-7225000 | Msa0834200:intron | 20.0% |
| !!! | ATGCTTACATTTATTCTTTT+TGG | - | chr5_4:7225082-7225101 | None:intergenic | 20.0% |
| !! | CTATTAAGTATTAACAAACA+TGG | - | chr5_4:7225640-7225659 | None:intergenic | 20.0% |
| ! | AAGAAATGAAAACCAAAGTA+CGG | - | chr5_4:7222488-7222507 | None:intergenic | 25.0% |
| ! | AAACATAATCCTGAATAAGT+GGG | - | chr5_4:7222529-7222548 | None:intergenic | 25.0% |
| ! | AAAACATAATCCTGAATAAG+TGG | - | chr5_4:7222530-7222549 | None:intergenic | 25.0% |
| !!! | TTGTAATTTTGATGAAGAGA+AGG | - | chr5_4:7222707-7222726 | None:intergenic | 25.0% |
| ! | TTCTCTTCATCAAAATTACA+AGG | + | chr5_4:7222706-7222725 | Msa0834200:five_prime_UTR | 25.0% |
| ! | ATGGATCAAAAAAATGAAAG+TGG | + | chr5_4:7222850-7222869 | Msa0834200:CDS | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+TGG | - | chr5_4:7223403-7223422 | None:intergenic | 25.0% |
| !! | ACTATTTTCATAAGCTATTC+TGG | + | chr5_4:7223505-7223524 | Msa0834200:intron | 25.0% |
| !! | TACTTAATGCATTTTAGATC+AGG | + | chr5_4:7223598-7223617 | Msa0834200:intron | 25.0% |
| ! | ATAAAGAGTAACAACATGTT+TGG | + | chr5_4:7223928-7223947 | Msa0834200:intron | 25.0% |
| ! | GTAAGTTGTAAGATTTGATA+TGG | + | chr5_4:7224573-7224592 | Msa0834200:intron | 25.0% |
| !! | TAGTTGATGTATTTCATTTC+AGG | + | chr5_4:7224885-7224904 | Msa0834200:intron | 25.0% |
| ! | TTACATCAACAAGAAATATC+AGG | + | chr5_4:7224935-7224954 | Msa0834200:CDS | 25.0% |
| ! | GCCTAAAAACAAAATTTAAG+AGG | + | chr5_4:7224971-7224990 | Msa0834200:intron | 25.0% |
| ! | TTTCTCCAGAAATTTCTTTA+TGG | + | chr5_4:7225193-7225212 | Msa0834200:intron | 25.0% |
| ! | AAGAACCATAAAGAAATTTC+TGG | - | chr5_4:7225201-7225220 | None:intergenic | 25.0% |
| !! | GATTACATTTTGTATGATAG+AGG | - | chr5_4:7225577-7225596 | None:intergenic | 25.0% |
| ! | AATGAAATAATGTTCACTAC+AGG | + | chr5_4:7225602-7225621 | Msa0834200:three_prime_UTR | 25.0% |
| AACCAACGTTGTAACTAAAA+AGG | + | chr5_4:7222449-7222468 | Msa0834200:five_prime_UTR | 30.0% | |
| !!! | AACCTTTTTAGTTACAACGT+TGG | - | chr5_4:7222454-7222473 | None:intergenic | 30.0% |
| AAAGTGGTATGTTTCAACAT+TGG | + | chr5_4:7222866-7222885 | Msa0834200:CDS | 30.0% | |
| ATGTTTCAACATTGGAGAAA+AGG | + | chr5_4:7222874-7222893 | Msa0834200:CDS | 30.0% | |
| AATAAGCTTACCGTTAATTG+AGG | - | chr5_4:7223135-7223154 | None:intergenic | 30.0% | |
| GCTTATGGACGTTTAATAAA+CGG | - | chr5_4:7223270-7223289 | None:intergenic | 30.0% | |
| ! | AAACATGGTCACAATTTGTT+TGG | - | chr5_4:7223388-7223407 | None:intergenic | 30.0% |
| AAACAAATTGTGACCATGTT+TGG | + | chr5_4:7223387-7223406 | Msa0834200:intron | 30.0% | |
| ! | AATAAGTTGAAAACAGCTTG+TGG | + | chr5_4:7223541-7223560 | Msa0834200:intron | 30.0% |
| ! | ATAAGTTGAAGACAGCTTAA+GGG | - | chr5_4:7223665-7223684 | None:intergenic | 30.0% |
| ! | AATAAGTTGAAGACAGCTTA+AGG | - | chr5_4:7223666-7223685 | None:intergenic | 30.0% |
| ATAAAGTTGAAACCCAGATA+TGG | + | chr5_4:7223901-7223920 | Msa0834200:intron | 30.0% | |
| ! | CTCTTTATTTGTCCATATCT+GGG | - | chr5_4:7223916-7223935 | None:intergenic | 30.0% |
| ! | ACTCTTTATTTGTCCATATC+TGG | - | chr5_4:7223917-7223936 | None:intergenic | 30.0% |
| ACCATTTACTAATTGTCGAA+TGG | + | chr5_4:7224020-7224039 | Msa0834200:CDS | 30.0% | |
| CCATTTACTAATTGTCGAAT+GGG | + | chr5_4:7224021-7224040 | Msa0834200:CDS | 30.0% | |
| TAGTGACAATCACTCTAAAT+TGG | + | chr5_4:7224200-7224219 | Msa0834200:CDS | 30.0% | |
| AGCATCTTATTGTGTTGAAA+TGG | + | chr5_4:7224254-7224273 | Msa0834200:CDS | 30.0% | |
| AACTGACATTATCTATGGTT+TGG | + | chr5_4:7224474-7224493 | Msa0834200:intron | 30.0% | |
| !!! | GTTCAATTACGATTTTTTCG+TGG | + | chr5_4:7224508-7224527 | Msa0834200:intron | 30.0% |
| TTGATATGGAACGATATTGA+TGG | + | chr5_4:7224587-7224606 | Msa0834200:intron | 30.0% | |
| ! | GCATTTTTCTTTGCTTCTTT+TGG | - | chr5_4:7224676-7224695 | None:intergenic | 30.0% |
| GAGTCTAGATTGATTATTGT+AGG | + | chr5_4:7225227-7225246 | Msa0834200:intron | 30.0% | |
| TAGATTGATTATTGTAGGTG+TGG | + | chr5_4:7225232-7225251 | Msa0834200:intron | 30.0% | |
| ATTATTGTAGGTGTGGTTTA+TGG | + | chr5_4:7225239-7225258 | Msa0834200:intron | 30.0% | |
| GATGGAATAGAATTTCTACT+TGG | + | chr5_4:7225398-7225417 | Msa0834200:CDS | 30.0% | |
| TGTATATGTCTCAATAGAGT+AGG | + | chr5_4:7225501-7225520 | Msa0834200:three_prime_UTR | 30.0% | |
| AAATGAAAACCAAAGTACGG+TGG | - | chr5_4:7222485-7222504 | None:intergenic | 35.0% | |
| AATCCTGAATAAGTGGGTAT+GGG | - | chr5_4:7222523-7222542 | None:intergenic | 35.0% | |
| TAATCCTGAATAAGTGGGTA+TGG | - | chr5_4:7222524-7222543 | None:intergenic | 35.0% | |
| TTGTGTTAAGAAGAATGTGG+TGG | - | chr5_4:7222645-7222664 | None:intergenic | 35.0% | |
| GTGTTGTGTTAAGAAGAATG+TGG | - | chr5_4:7222648-7222667 | None:intergenic | 35.0% | |
| ATCAGTTGAGAGTGAGATAT+AGG | - | chr5_4:7222679-7222698 | None:intergenic | 35.0% | |
| TGATGTACAGAATTTGTGAG+TGG | + | chr5_4:7222817-7222836 | Msa0834200:intron | 35.0% | |
| TGTGAGTGGTTAGTAAATGA+TGG | + | chr5_4:7222831-7222850 | Msa0834200:exon | 35.0% | |
| AACATTGGAGAAAAGGATCA+TGG | + | chr5_4:7222881-7222900 | Msa0834200:CDS | 35.0% | |
| !! | TTCTGCTTCTGAGATTTCAA+AGG | + | chr5_4:7223038-7223057 | Msa0834200:CDS | 35.0% |
| TAAGACTCATGAAACATTGC+CGG | + | chr5_4:7223095-7223114 | Msa0834200:CDS | 35.0% | |
| GTTGACTAGCAATACATTTC+AGG | + | chr5_4:7223167-7223186 | Msa0834200:intron | 35.0% | |
| CAATACATTTCAGGCCTATT+TGG | + | chr5_4:7223176-7223195 | Msa0834200:intron | 35.0% | |
| TACTCGCATAAGTATTTGTG+AGG | + | chr5_4:7223220-7223239 | Msa0834200:intron | 35.0% | |
| !! | CTTATTTTCATAAGCTCTCC+AGG | + | chr5_4:7223680-7223699 | Msa0834200:intron | 35.0% |
| GCTGTTCTTATAAACTATCC+TGG | - | chr5_4:7223701-7223720 | None:intergenic | 35.0% | |
| AGAGTAACAACATGTTTGGT+TGG | + | chr5_4:7223932-7223951 | Msa0834200:intron | 35.0% | |
| CCCATTCGACAATTAGTAAA+TGG | - | chr5_4:7224024-7224043 | None:intergenic | 35.0% | |
| AATTGTCGAATGGGTACTAT+TGG | + | chr5_4:7224030-7224049 | Msa0834200:CDS | 35.0% | |
| GAATGGGTACTATTGGAAAA+TGG | + | chr5_4:7224037-7224056 | Msa0834200:CDS | 35.0% | |
| !! | ACTTACATCAGAAGCATCAT+GGG | + | chr5_4:7224064-7224083 | Msa0834200:CDS | 35.0% |
| ATGCAAACACTTCTGTTAAG+AGG | + | chr5_4:7224088-7224107 | Msa0834200:CDS | 35.0% | |
| CTCTAAATTGGATGTTGCTA+TGG | + | chr5_4:7224212-7224231 | Msa0834200:CDS | 35.0% | |
| CTGTGAACTGACATTATCTA+TGG | + | chr5_4:7224469-7224488 | Msa0834200:intron | 35.0% | |
| !!! | TTTTTTCGTGGTTCAATGTC+TGG | + | chr5_4:7224520-7224539 | Msa0834200:intron | 35.0% |
| ! | ATGGAACGATATTGATGGTT+TGG | + | chr5_4:7224592-7224611 | Msa0834200:intron | 35.0% |
| !! | TGTTTCATGTAAGCTTTGAG+AGG | + | chr5_4:7224625-7224644 | Msa0834200:intron | 35.0% |
| AAGATCAAAAGCAAGCACAT+TGG | + | chr5_4:7225045-7225064 | Msa0834200:CDS | 35.0% | |
| ATGGCCATACAGAAAAGAAA+GGG | + | chr5_4:7225283-7225302 | Msa0834200:CDS | 35.0% | |
| !! | GCTTCTGAAGATCTCTATTT+TGG | + | chr5_4:7225308-7225327 | Msa0834200:CDS | 35.0% |
| CAAACTCCACAAGCAAAAAT+GGG | + | chr5_4:7225373-7225392 | Msa0834200:CDS | 35.0% | |
| !! | GTAGCAGTTCTTGATTTGTT+TGG | + | chr5_4:7225474-7225493 | Msa0834200:exon | 35.0% |
| ! | TCCAAGCACATTGATTGGAT+TGG | + | chr5_4:7222347-7222366 | Msa0834200:five_prime_UTR | 40.0% |
| ! | GTTAAGAAGAATGTGGTGGA+AGG | - | chr5_4:7222641-7222660 | None:intergenic | 40.0% |
| GATCTAGACAAGAACTCCAT+AGG | - | chr5_4:7223009-7223028 | None:intergenic | 40.0% | |
| GATTTCTGCGCCTCAATTAA+CGG | + | chr5_4:7223122-7223141 | Msa0834200:CDS | 40.0% | |
| TTCCCATATACTCTTCCAGA+CGG | - | chr5_4:7223247-7223266 | None:intergenic | 40.0% | |
| TTAAACGTCCATAAGCTCTC+AGG | + | chr5_4:7223274-7223293 | Msa0834200:intron | 40.0% | |
| TAAACGTCCATAAGCTCTCA+GGG | + | chr5_4:7223275-7223294 | Msa0834200:intron | 40.0% | |
| ! | CTAATGCTATTTGCCCTGTT+TGG | - | chr5_4:7223840-7223859 | None:intergenic | 40.0% |
| GTAAATGGTATGAGCTTTCC+AGG | - | chr5_4:7224009-7224028 | None:intergenic | 40.0% | |
| !! | CACTTACATCAGAAGCATCA+TGG | + | chr5_4:7224063-7224082 | Msa0834200:CDS | 40.0% |
| CATTCTGCACTATCAATTGC+CGG | + | chr5_4:7224144-7224163 | Msa0834200:CDS | 40.0% | |
| ATAAGATGCTAAGAGCTGTG+TGG | - | chr5_4:7224244-7224263 | None:intergenic | 40.0% | |
| ACTTAACAGTAGAAGCGACA+CGG | - | chr5_4:7224305-7224324 | None:intergenic | 40.0% | |
| GTAAGAGTCATTAGATCACC+TGG | - | chr5_4:7224348-7224367 | None:intergenic | 40.0% | |
| AACTGAACCAGACAGTTCAA+CGG | + | chr5_4:7224434-7224453 | Msa0834200:intron | 40.0% | |
| ! | CTATGGTTTGGCTATTTGAG+TGG | + | chr5_4:7224486-7224505 | Msa0834200:intron | 40.0% |
| TCAATAAGTCCCTACGATAG+AGG | + | chr5_4:7224697-7224716 | Msa0834200:CDS | 40.0% | |
| TCTGCAATTCCTCTATCGTA+GGG | - | chr5_4:7224709-7224728 | None:intergenic | 40.0% | |
| TTCTGCAATTCCTCTATCGT+AGG | - | chr5_4:7224710-7224729 | None:intergenic | 40.0% | |
| TTGTTGCAGGTTACGGAAAA+AGG | + | chr5_4:7224799-7224818 | Msa0834200:CDS | 40.0% | |
| ! | TCATTTCAGGTGCATTACGA+TGG | + | chr5_4:7224898-7224917 | Msa0834200:intron | 40.0% |
| TGCATTACGATGGAAACATG+TGG | + | chr5_4:7224908-7224927 | Msa0834200:CDS | 40.0% | |
| ATCAAAAGCAAGCACATTGG+AGG | + | chr5_4:7225048-7225067 | Msa0834200:CDS | 40.0% | |
| CATGGCCATACAGAAAAGAA+AGG | + | chr5_4:7225282-7225301 | Msa0834200:CDS | 40.0% | |
| ! | GCTTCCCTTTCTTTTCTGTA+TGG | - | chr5_4:7225290-7225309 | None:intergenic | 40.0% |
| GCAAACTCCACAAGCAAAAA+TGG | + | chr5_4:7225372-7225391 | Msa0834200:CDS | 40.0% | |
| !! | CATCAACCCATTTTTGCTTG+TGG | - | chr5_4:7225382-7225401 | None:intergenic | 40.0% |
| !! | CACAAGCAAAAATGGGTTGA+TGG | + | chr5_4:7225380-7225399 | Msa0834200:CDS | 40.0% |
| TTCACTACAGGAACTGCTTA+TGG | + | chr5_4:7225614-7225633 | Msa0834200:three_prime_UTR | 40.0% | |
| GCCAATCCAATCAATGTGCT+TGG | - | chr5_4:7222351-7222370 | None:intergenic | 45.0% | |
| TCACTACTACCACCGTACTT+TGG | + | chr5_4:7222473-7222492 | Msa0834200:five_prime_UTR | 45.0% | |
| GAACCCATACCCACTTATTC+AGG | + | chr5_4:7222517-7222536 | Msa0834200:five_prime_UTR | 45.0% | |
| GGAGAAAAGGATCATGGCAA+TGG | + | chr5_4:7222887-7222906 | Msa0834200:CDS | 45.0% | |
| AAAGGATCATGGCAATGGCA+AGG | + | chr5_4:7222892-7222911 | Msa0834200:CDS | 45.0% | |
| AAGGATCATGGCAATGGCAA+GGG | + | chr5_4:7222893-7222912 | Msa0834200:CDS | 45.0% | |
| AAGAACTCCATAGGCTCAAG+AGG | - | chr5_4:7223000-7223019 | None:intergenic | 45.0% | |
| TGGAGTTCTTGTCTAGATCC+TGG | + | chr5_4:7223010-7223029 | Msa0834200:CDS | 45.0% | |
| AAGTATTTGTGAGGTCCGTC+TGG | + | chr5_4:7223229-7223248 | Msa0834200:intron | 45.0% | |
| ! | GTCCGTCTGGAAGAGTATAT+GGG | + | chr5_4:7223242-7223261 | Msa0834200:intron | 45.0% |
| AAGTTGTCCCTGAGAGCTTA+TGG | - | chr5_4:7223285-7223304 | None:intergenic | 45.0% | |
| ! | TGTGTTCATCTTTTGCAGCC+TGG | + | chr5_4:7223988-7224007 | Msa0834200:intron | 45.0% |
| GTTGAAATGGCAGAGTTAGC+AGG | + | chr5_4:7224267-7224286 | Msa0834200:CDS | 45.0% | |
| CGCTTCTACTGTTAAGTCTG+CGG | + | chr5_4:7224308-7224327 | Msa0834200:CDS | 45.0% | |
| AACATCTGACACTCAGAAGC+AGG | - | chr5_4:7224748-7224767 | None:intergenic | 45.0% | |
| !! | GGGAGATTTGTTGCAGGTTA+CGG | + | chr5_4:7224792-7224811 | Msa0834200:CDS | 45.0% |
| TGTGTAACGAAGACTCTGCA+TGG | + | chr5_4:7225264-7225283 | Msa0834200:CDS | 45.0% | |
| TTTGGCCTCAAAACTGCACA+AGG | + | chr5_4:7225326-7225345 | Msa0834200:CDS | 45.0% | |
| ! | GAAGACCTTGTGCAGTTTTG+AGG | - | chr5_4:7225334-7225353 | None:intergenic | 45.0% |
| ! | AGCGCGTTTTCGTACGTAGT+AGG | - | chr5_4:7222423-7222442 | None:intergenic | 50.0% |
| !! | GTTGGTGGCTCAGGAATTTC+TGG | - | chr5_4:7222976-7222995 | None:intergenic | 50.0% |
| !! | ATAGGCTCAAGAGGTGTTGG+TGG | - | chr5_4:7222991-7223010 | None:intergenic | 50.0% |
| ACCAACACCTCTTGAGCCTA+TGG | + | chr5_4:7222990-7223009 | Msa0834200:CDS | 50.0% | |
| ! | TCCATAGGCTCAAGAGGTGT+TGG | - | chr5_4:7222994-7223013 | None:intergenic | 50.0% |
| CTCAGAAGCAGAAAGACTCC+AGG | - | chr5_4:7223031-7223050 | None:intergenic | 50.0% | |
| TGAGGCGCAGAAATCACTTC+CGG | - | chr5_4:7223117-7223136 | None:intergenic | 50.0% | |
| ! | GGTCCGTCTGGAAGAGTATA+TGG | + | chr5_4:7223241-7223260 | Msa0834200:intron | 50.0% |
| GCGGTCGATATTCAAATGCC+AGG | + | chr5_4:7224327-7224346 | Msa0834200:CDS | 50.0% | |
| CGTTCAACCGTTGAACTGTC+TGG | - | chr5_4:7224444-7224463 | None:intergenic | 50.0% | |
| ATCTGACACTCAGAAGCAGG+AGG | - | chr5_4:7224745-7224764 | None:intergenic | 50.0% | |
| TGAGAACCATTCTCCATGCG+AGG | + | chr5_4:7224771-7224790 | Msa0834200:CDS | 50.0% | |
| GAGAACCATTCTCCATGCGA+GGG | + | chr5_4:7224772-7224791 | Msa0834200:CDS | 50.0% | |
| AATCTCCCTCGCATGGAGAA+TGG | - | chr5_4:7224780-7224799 | None:intergenic | 50.0% | |
| TGCAACAAATCTCCCTCGCA+TGG | - | chr5_4:7224787-7224806 | None:intergenic | 50.0% | |
| !! | ATGCGAGGGAGATTTGTTGC+AGG | + | chr5_4:7224786-7224805 | Msa0834200:CDS | 50.0% |
| !! | TCAAGAGGTGTTGGTGGCTC+AGG | - | chr5_4:7222985-7223004 | None:intergenic | 55.0% |
| AGCAACCACAGAAGCCAACG+CGG | - | chr5_4:7224178-7224197 | None:intergenic | 55.0% | |
| CTTACTGCTGCAGCTGCAAC+AGG | + | chr5_4:7224363-7224382 | Msa0834200:CDS | 55.0% | |
| AACCACAGAAGCCAACGCGG+AGG | - | chr5_4:7224175-7224194 | None:intergenic | 60.0% | |
| ! | AGCCAACGCGGAGGCTAGTC+CGG | - | chr5_4:7224166-7224185 | None:intergenic | 65.0% |
| !! | AGCCTCCGCGTTGGCTTCTG+TGG | + | chr5_4:7224170-7224189 | Msa0834200:CDS | 65.0% |
| !! | TGCCGGACTAGCCTCCGCGT+TGG | + | chr5_4:7224161-7224180 | Msa0834200:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 7222347 | 7225675 | 7222347 | ID=Msa0834200;Name=Msa0834200 |
| chr5_4 | mRNA | 7222347 | 7225675 | 7222347 | ID=Msa0834200-mRNA-1;Parent=Msa0834200;Name=Msa0834200-mRNA-1;_AED=0.05;_eAED=0.05;_QI=401|1|1|1|0.83|0.71|7|188|401 |
| chr5_4 | exon | 7222347 | 7222727 | 7222347 | ID=Msa0834200-mRNA-1:exon:3171;Parent=Msa0834200-mRNA-1 |
| chr5_4 | exon | 7222827 | 7223143 | 7222827 | ID=Msa0834200-mRNA-1:exon:3172;Parent=Msa0834200-mRNA-1 |
| chr5_4 | exon | 7224006 | 7224384 | 7224006 | ID=Msa0834200-mRNA-1:exon:3173;Parent=Msa0834200-mRNA-1 |
| chr5_4 | exon | 7224638 | 7224820 | 7224638 | ID=Msa0834200-mRNA-1:exon:3174;Parent=Msa0834200-mRNA-1 |
| chr5_4 | exon | 7224907 | 7224956 | 7224907 | ID=Msa0834200-mRNA-1:exon:3175;Parent=Msa0834200-mRNA-1 |
| chr5_4 | exon | 7225036 | 7225093 | 7225036 | ID=Msa0834200-mRNA-1:exon:3176;Parent=Msa0834200-mRNA-1 |
| chr5_4 | exon | 7225249 | 7225675 | 7225249 | ID=Msa0834200-mRNA-1:exon:3177;Parent=Msa0834200-mRNA-1 |
| chr5_4 | five_prime_UTR | 7222347 | 7222727 | 7222347 | ID=Msa0834200-mRNA-1:five_prime_utr;Parent=Msa0834200-mRNA-1 |
| chr5_4 | five_prime_UTR | 7222827 | 7222846 | 7222827 | ID=Msa0834200-mRNA-1:five_prime_utr;Parent=Msa0834200-mRNA-1 |
| chr5_4 | CDS | 7222847 | 7223143 | 7222847 | ID=Msa0834200-mRNA-1:cds;Parent=Msa0834200-mRNA-1 |
| chr5_4 | CDS | 7224006 | 7224384 | 7224006 | ID=Msa0834200-mRNA-1:cds;Parent=Msa0834200-mRNA-1 |
| chr5_4 | CDS | 7224638 | 7224820 | 7224638 | ID=Msa0834200-mRNA-1:cds;Parent=Msa0834200-mRNA-1 |
| chr5_4 | CDS | 7224907 | 7224956 | 7224907 | ID=Msa0834200-mRNA-1:cds;Parent=Msa0834200-mRNA-1 |
| chr5_4 | CDS | 7225036 | 7225093 | 7225036 | ID=Msa0834200-mRNA-1:cds;Parent=Msa0834200-mRNA-1 |
| chr5_4 | CDS | 7225249 | 7225487 | 7225249 | ID=Msa0834200-mRNA-1:cds;Parent=Msa0834200-mRNA-1 |
| chr5_4 | three_prime_UTR | 7225488 | 7225675 | 7225488 | ID=Msa0834200-mRNA-1:three_prime_utr;Parent=Msa0834200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
