Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436440 | XP_013447151.1 | 96.234 | 239 | 9 | 0 | 1 | 239 | 1 | 239 | 6.67e-165 | 465 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436440 | sp|Q9SWE7|VATE_CITLI | 78.243 | 239 | 42 | 1 | 1 | 239 | 1 | 229 | 2.13e-131 | 372 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436440 | A0A072TWB9 | 96.234 | 239 | 9 | 0 | 1 | 239 | 1 | 239 | 3.18e-165 | 465 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0039750 | Msa0436440 | 0.816881 | 4.398617e-52 | -8.615850e-47 |
| Msa0044440 | Msa0436440 | 0.810017 | 1.420972e-50 | -8.615850e-47 |
| Msa0045620 | Msa0436440 | 0.818394 | 2.006020e-52 | -8.615850e-47 |
| Msa0050530 | Msa0436440 | 0.805482 | 1.306841e-49 | -8.615850e-47 |
| Msa0089540 | Msa0436440 | 0.822351 | 2.481934e-53 | -8.615850e-47 |
| Msa0100890 | Msa0436440 | 0.810016 | 1.421528e-50 | -8.615850e-47 |
| Msa0121320 | Msa0436440 | 0.818045 | 2.405743e-52 | -8.615850e-47 |
| Msa0164170 | Msa0436440 | 0.806587 | 7.652281e-50 | -8.615850e-47 |
| Msa0166180 | Msa0436440 | 0.816319 | 5.879349e-52 | -8.615850e-47 |
| Msa0168380 | Msa0436440 | 0.816645 | 4.970044e-52 | -8.615850e-47 |
| Msa0183310 | Msa0436440 | -0.819772 | 9.745239e-53 | -8.615850e-47 |
| Msa0221460 | Msa0436440 | -0.812339 | 4.456634e-51 | -8.615850e-47 |
| Msa0384590 | Msa0436440 | 0.826005 | 3.439156e-54 | -8.615850e-47 |
| Msa0416210 | Msa0436440 | 0.819520 | 1.112498e-52 | -8.615850e-47 |
| Msa0421220 | Msa0436440 | -0.802666 | 5.035253e-49 | -8.615850e-47 |
| Msa0433630 | Msa0436440 | 0.807116 | 5.915357e-50 | -8.615850e-47 |
| Msa0434660 | Msa0436440 | 0.823675 | 1.219294e-53 | -8.615850e-47 |
| Msa0436440 | Msa0495620 | 0.827286 | 1.701598e-54 | -8.615850e-47 |
| Msa0436440 | Msa0521510 | 0.818211 | 2.206731e-52 | -8.615850e-47 |
| Msa0436440 | Msa0522540 | 0.829275 | 5.637293e-55 | -8.615850e-47 |
| Msa0436440 | Msa0526150 | 0.939718 | 7.927206e-100 | -8.615850e-47 |
| Msa0436440 | Msa0541880 | 0.820304 | 7.362021e-53 | -8.615850e-47 |
| Msa0436440 | Msa0541940 | 0.824356 | 8.435980e-54 | -8.615850e-47 |
| Msa0436440 | Msa0567330 | 0.824870 | 6.383641e-54 | -8.615850e-47 |
| Msa0436440 | Msa0567570 | 0.801018 | 1.097309e-48 | -8.615850e-47 |
| Msa0436440 | Msa0568290 | -0.817274 | 3.591066e-52 | -8.615850e-47 |
| Msa0436440 | Msa0568460 | -0.808845 | 2.535657e-50 | -8.615850e-47 |
| Msa0436440 | Msa0572360 | 0.955406 | 3.264091e-113 | -8.615850e-47 |
| Msa0436440 | Msa0576320 | 0.825894 | 3.654408e-54 | -8.615850e-47 |
| Msa0436440 | Msa0579080 | 0.823807 | 1.135538e-53 | -8.615850e-47 |
| Msa0436440 | Msa0579160 | 0.804374 | 2.227894e-49 | -8.615850e-47 |
| Msa0436440 | Msa0579220 | 0.806874 | 6.653053e-50 | -8.615850e-47 |
| Msa0436440 | Msa0610690 | 0.815084 | 1.108030e-51 | -8.615850e-47 |
| Msa0436440 | Msa0623310 | 0.819098 | 1.388007e-52 | -8.615850e-47 |
| Msa0436440 | Msa0630440 | 0.821853 | 3.237539e-53 | -8.615850e-47 |
| Msa0436440 | Msa0659020 | -0.816056 | 6.732245e-52 | -8.615850e-47 |
| Msa0436440 | Msa0685610 | 0.830873 | 2.298025e-55 | -8.615850e-47 |
| Msa0436440 | Msa0704690 | 0.824796 | 6.646745e-54 | -8.615850e-47 |
| Msa0436440 | Msa0707360 | 0.815261 | 1.012403e-51 | -8.615850e-47 |
| Msa0436440 | Msa0733240 | -0.808619 | 2.833441e-50 | -8.615850e-47 |
| Msa0436440 | Msa0742370 | -0.809762 | 1.611757e-50 | -8.615850e-47 |
| Msa0436440 | Msa0761830 | 0.806079 | 9.790701e-50 | -8.615850e-47 |
| Msa0436440 | Msa0774360 | -0.800548 | 1.368659e-48 | -8.615850e-47 |
| Msa0436440 | Msa0812020 | -0.814696 | 1.350950e-51 | -8.615850e-47 |
| Msa0436440 | Msa0846900 | 0.804042 | 2.611572e-49 | -8.615850e-47 |
| Msa0436440 | Msa0852090 | -0.811402 | 7.127550e-51 | -8.615850e-47 |
| Msa0436440 | Msa0870020 | 0.810721 | 1.001328e-50 | -8.615850e-47 |
| Msa0436440 | Msa0970040 | 0.812382 | 4.361617e-51 | -8.615850e-47 |
| Msa0436440 | Msa0970100 | 0.819360 | 1.210174e-52 | -8.615850e-47 |
| Msa0436440 | Msa1026710 | 0.810723 | 1.000390e-50 | -8.615850e-47 |
| Msa0436440 | Msa1038860 | 0.832533 | 8.956564e-56 | -8.615850e-47 |
| Msa0436440 | Msa1039440 | -0.805426 | 1.342524e-49 | -8.615850e-47 |
| Msa0436440 | Msa1041060 | 0.803774 | 2.969738e-49 | -8.615850e-47 |
| Msa0436440 | Msa1130770 | 0.807871 | 4.089682e-50 | -8.615850e-47 |
| Msa0436440 | Msa1165460 | 0.806114 | 9.626491e-50 | -8.615850e-47 |
| Msa0436440 | Msa1183900 | 0.810727 | 9.983813e-51 | -8.615850e-47 |
| Msa0436440 | Msa1190560 | 0.848937 | 4.457287e-60 | -8.615850e-47 |
| Msa0436440 | Msa1190770 | 0.808636 | 2.810345e-50 | -8.615850e-47 |
| Msa0436440 | Msa1197720 | 0.810061 | 1.389789e-50 | -8.615850e-47 |
| Msa0436440 | Msa1220580 | 0.821748 | 3.423127e-53 | -8.615850e-47 |
| Msa0436440 | Msa1251410 | 0.800819 | 1.205066e-48 | -8.615850e-47 |
| Msa0436440 | Msa1334560 | 0.821886 | 3.181475e-53 | -8.615850e-47 |
| Msa0436440 | Msa1342560 | 0.800627 | 1.318574e-48 | -8.615850e-47 |
| Msa0436440 | Msa1352580 | 0.863974 | 1.696441e-64 | -8.615850e-47 |
| Msa0436440 | Msa1352600 | -0.809080 | 2.257579e-50 | -8.615850e-47 |
| Msa0436440 | Msa1363280 | -0.808852 | 2.526230e-50 | -8.615850e-47 |
| Msa0436440 | Msa1371800 | 0.824888 | 6.323565e-54 | -8.615850e-47 |
| Msa0436440 | Msa1376310 | 0.818716 | 1.695090e-52 | -8.615850e-47 |
| Msa0436440 | Msa1379940 | 0.960397 | 1.639724e-118 | -8.615850e-47 |
| Msa0436440 | Msa1407810 | 0.817706 | 2.869595e-52 | -8.615850e-47 |
| Msa0436440 | Msa1420830 | 0.844644 | 6.654940e-59 | -8.615850e-47 |
| Msa0436440 | Msa1428230 | -0.808466 | 3.054049e-50 | -8.615850e-47 |
| Msa0436440 | Msa1429810 | 0.802042 | 6.768652e-49 | -8.615850e-47 |
| Msa0436440 | Msa1433360 | 0.808345 | 3.242466e-50 | -8.615850e-47 |
| Msa0436440 | Msa1437780 | 0.816924 | 4.302250e-52 | -8.615850e-47 |
| Msa0436440 | Msa1461260 | 0.803207 | 3.891013e-49 | -8.615850e-47 |
| Msa0436440 | Msa1462780 | 0.817010 | 4.115734e-52 | -8.615850e-47 |
| Msa0244820 | Msa0436440 | -0.811337 | 7.361697e-51 | -8.615850e-47 |
| Msa0272790 | Msa0436440 | 0.803842 | 2.874454e-49 | -8.615850e-47 |
| Msa0276800 | Msa0436440 | -0.816473 | 5.430837e-52 | -8.615850e-47 |
| Msa0300670 | Msa0436440 | -0.814613 | 1.409485e-51 | -8.615850e-47 |
| Msa0307430 | Msa0436440 | 0.820989 | 5.123076e-53 | -8.615850e-47 |
| Msa0316720 | Msa0436440 | -0.810313 | 1.226470e-50 | -8.615850e-47 |
| Msa0337760 | Msa0436440 | -0.814048 | 1.878694e-51 | -8.615850e-47 |
| Msa0355080 | Msa0436440 | -0.800173 | 1.631458e-48 | -8.615850e-47 |
| Msa0356640 | Msa0436440 | 0.828469 | 8.834758e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436440 | MtrunA17_Chr8g0387781 | 96.234 | 239 | 9 | 0 | 1 | 239 | 1 | 239 | 6.13e-169 | 465 |
| Msa0436440 | MtrunA17_Chr5g0396971 | 78.750 | 240 | 41 | 1 | 1 | 240 | 1 | 230 | 2.25e-134 | 377 |
| Msa0436440 | MtrunA17_Chr4g0037391 | 68.831 | 231 | 60 | 2 | 1 | 229 | 1 | 221 | 1.39e-109 | 315 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436440 | AT4G11150.1 | 72.996 | 237 | 54 | 1 | 1 | 237 | 1 | 227 | 6.58e-122 | 346 |
| Msa0436440 | AT1G64200.1 | 71.250 | 240 | 65 | 1 | 1 | 240 | 1 | 236 | 2.20e-120 | 342 |
| Msa0436440 | AT1G64200.2 | 71.429 | 231 | 62 | 1 | 1 | 231 | 1 | 227 | 9.32e-116 | 331 |
| Msa0436440 | AT3G08560.1 | 63.445 | 238 | 75 | 2 | 1 | 236 | 1 | 228 | 1.28e-101 | 295 |
| Msa0436440 | AT1G64200.3 | 70.312 | 192 | 53 | 1 | 1 | 192 | 1 | 188 | 3.55e-91 | 267 |
Find 53 sgRNAs with CRISPR-Local
Find 443 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATATAAGTTTCACCTTGA+TGG | 0.295071 | 3_2:+90016274 | Msa0436440:three_prime_UTR |
| TCTAAAAGATCTCATTGTTC+AGG | 0.350211 | 3_2:+90011896 | Msa0436440:CDS |
| ACTAGTTGCAAATAATATAT+TGG | 0.352674 | 3_2:+90016308 | Msa0436440:three_prime_UTR |
| CATCAAGGTGAAACTTATAT+TGG | 0.372050 | 3_2:-90016273 | None:intergenic |
| CAGATCCGAAAGCAGCTCTT+TGG | 0.391740 | 3_2:+90016089 | Msa0436440:intron |
| TTCGTGAGTGTTGTGATGCT+TGG | 0.393565 | 3_2:-90012545 | None:intergenic |
| TTGTTGTGGTGGGGTGGTGT+TGG | 0.396539 | 3_2:+90014776 | Msa0436440:intron |
| CAATGCAGCTGAATGCTTCT+CGG | 0.400725 | 3_2:+90011739 | Msa0436440:CDS |
| TCGATTACATTTGTTGCCCC+TGG | 0.437470 | 3_2:+90016133 | Msa0436440:three_prime_UTR |
| ACATTGAGGATATGTATTCC+AGG | 0.438542 | 3_2:-90016151 | None:intergenic |
| TCGTGAGTGTTGTGATGCTT+GGG | 0.455622 | 3_2:-90012544 | None:intergenic |
| GGCGGATAAATCTCACCATC+TGG | 0.473875 | 3_2:-90010575 | None:intergenic |
| TGTTCTCATATCGTGTATGA+TGG | 0.484068 | 3_2:+90016228 | Msa0436440:three_prime_UTR |
| ATACACGATATGAGAACAAC+AGG | 0.485177 | 3_2:-90016223 | None:intergenic |
| GCTCACATTCAAAAGTTCCT+TGG | 0.486133 | 3_2:-90011817 | None:intergenic |
| CTTGTCCAAAGAGCTGCTTT+CGG | 0.496240 | 3_2:-90016094 | None:intergenic |
| GTGGTGTTGGCTTCTCGTGA+TGG | 0.512785 | 3_2:+90014789 | Msa0436440:CDS |
| CAGGAAAACAAGTTCGTCAA+TGG | 0.514811 | 3_2:-90010504 | None:intergenic |
| AATGAAAGAAGTTGCAGCCA+AGG | 0.517165 | 3_2:+90011800 | Msa0436440:CDS |
| AAATACTCTTGATGCACGGC+TGG | 0.517377 | 3_2:+90014827 | Msa0436440:CDS |
| TTGTTGTTGTTGTGGTGGGG+TGG | 0.522682 | 3_2:+90014770 | Msa0436440:intron |
| CAATATCGAGAAGCTTCAGT+TGG | 0.524663 | 3_2:+90010767 | Msa0436440:CDS |
| ACAACACTCACGAACCCTAC+TGG | 0.526388 | 3_2:+90012554 | Msa0436440:CDS |
| CTTCTGTCTTGTTGAGATGT+CGG | 0.530658 | 3_2:+90012401 | Msa0436440:CDS |
| TTCTCATATCGTGTATGATG+GGG | 0.542615 | 3_2:+90016230 | Msa0436440:three_prime_UTR |
| TTGTGGTCAACAATGATCTC+TGG | 0.546406 | 3_2:-90012502 | None:intergenic |
| TGTGCTGGATGCAGCTGCAC+AGG | 0.546828 | 3_2:+90012450 | Msa0436440:CDS |
| GAACATGAACTTTACCAGTA+GGG | 0.549069 | 3_2:-90012568 | None:intergenic |
| TTACATAAGCAATGACATTG+AGG | 0.549681 | 3_2:-90016165 | None:intergenic |
| TATCTTCAACACGGTGATGA+CGG | 0.556951 | 3_2:-90011839 | None:intergenic |
| GTTCTCATATCGTGTATGAT+GGG | 0.562196 | 3_2:+90016229 | Msa0436440:three_prime_UTR |
| CATTGAGGATATGTATTCCA+GGG | 0.567671 | 3_2:-90016150 | None:intergenic |
| GATCTCTCTCTCTGCTGAAG+AGG | 0.568633 | 3_2:+90010623 | Msa0436440:CDS |
| TCGGAAACATGACGTGCACT+TGG | 0.572529 | 3_2:+90012420 | Msa0436440:CDS |
| AACAGTAAACATCACAACAT+TGG | 0.572592 | 3_2:-90016340 | None:intergenic |
| GTGTTGTGATGCTTGGGCGC+AGG | 0.574871 | 3_2:-90012538 | None:intergenic |
| TTGTGATGCTTGGGCGCAGG+TGG | 0.576644 | 3_2:-90012535 | None:intergenic |
| CGACATCTCAACAAGACAGA+AGG | 0.583156 | 3_2:-90012400 | None:intergenic |
| ATATATTATTTGCAACTAGT+CGG | 0.594089 | 3_2:-90016305 | None:intergenic |
| GCACTTGGTAGAACATGTGC+TGG | 0.602448 | 3_2:+90012435 | Msa0436440:CDS |
| CTCTAAGCAAATCCACCAGA+TGG | 0.604393 | 3_2:+90010560 | Msa0436440:CDS |
| AGCAGAGAGAGAGATCTCGC+TGG | 0.607582 | 3_2:-90010616 | None:intergenic |
| AGTCGGAGAAAACACCATCA+AGG | 0.635390 | 3_2:-90016288 | None:intergenic |
| TGGTCAACAATGATCTCTGG+TGG | 0.640783 | 3_2:-90012499 | None:intergenic |
| TGAAACATATCAACTTGAGT+CGG | 0.640927 | 3_2:+90010481 | Msa0436440:five_prime_UTR |
| AGATCAGACAAGAATATGAG+CGG | 0.642819 | 3_2:+90010808 | Msa0436440:CDS |
| TCTCATATCGTGTATGATGG+GGG | 0.650986 | 3_2:+90016231 | Msa0436440:three_prime_UTR |
| GGATAAATCTCACCATCTGG+TGG | 0.662922 | 3_2:-90010572 | None:intergenic |
| CATGTAAAATATCTTCAACA+CGG | 0.686965 | 3_2:-90011848 | None:intergenic |
| GTGAAAATACTCTTGATGCA+CGG | 0.687449 | 3_2:+90014823 | Msa0436440:CDS |
| ATTGAGGATATGTATTCCAG+GGG | 0.705670 | 3_2:-90016149 | None:intergenic |
| CAGGTGGAAGATAGACATTG+TGG | 0.710884 | 3_2:-90012519 | None:intergenic |
| TCTTCTCCGAAAATGAACGA+CGG | 0.753333 | 3_2:+90010531 | Msa0436440:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTCAAAAAAAAAATC+TGG | + | chr3_2:90011481-90011500 | Msa0436440:intron | 10.0% |
| !! | ATCTACAAATAATATAAAAT+TGG | - | chr3_2:90012048-90012067 | None:intergenic | 10.0% |
| !! | AAGAAACAAAAAAAAAAAAC+AGG | - | chr3_2:90010735-90010754 | None:intergenic | 15.0% |
| !! | ATTTCAGATATTGAATATAT+TGG | + | chr3_2:90011008-90011027 | Msa0436440:intron | 15.0% |
| !! | TTTCAAATTATTATCTGTAT+CGG | - | chr3_2:90011096-90011115 | None:intergenic | 15.0% |
| !! | TTCAAATGATAATTATATAC+TGG | + | chr3_2:90012180-90012199 | Msa0436440:intron | 15.0% |
| !!! | TATTCTTCTGATATTATTTT+AGG | + | chr3_2:90012291-90012310 | Msa0436440:intron | 15.0% |
| !! | AGACTTCTATTTAAATATTA+AGG | + | chr3_2:90012592-90012611 | Msa0436440:intron | 15.0% |
| !! | AAAACTAAAGTAAAAAGATA+AGG | - | chr3_2:90013900-90013919 | None:intergenic | 15.0% |
| !!! | TTATCTTTTTACTTTAGTTT+TGG | + | chr3_2:90013899-90013918 | Msa0436440:intron | 15.0% |
| !!! | ATTCTAAACTTTTGAATTTT+TGG | + | chr3_2:90015314-90015333 | Msa0436440:intron | 15.0% |
| !!! | ATTTTATGTATTTGGTTTAT+TGG | + | chr3_2:90015857-90015876 | Msa0436440:intron | 15.0% |
| !! | AAGTAATTGAATGTAATCAA+AGG | - | chr3_2:90011459-90011478 | None:intergenic | 20.0% |
| !! | TTGATATATTCTAATTTCTG+TGG | + | chr3_2:90011690-90011709 | Msa0436440:intron | 20.0% |
| !! | CTAGTATATTCATGAAAAAT+TGG | + | chr3_2:90012117-90012136 | Msa0436440:intron | 20.0% |
| !! | TTAAATATTAAGGAACTGTA+TGG | + | chr3_2:90012602-90012621 | Msa0436440:intron | 20.0% |
| !!! | CATATTATTTTCAACTAGAA+AGG | + | chr3_2:90014958-90014977 | Msa0436440:intron | 20.0% |
| !! | TTGTACCAAAAAAAAAAGAA+AGG | + | chr3_2:90014991-90015010 | Msa0436440:intron | 20.0% |
| !! | TTGAAATATTGTACGTATTA+AGG | + | chr3_2:90015111-90015130 | Msa0436440:intron | 20.0% |
| !! | TGAAATATTGTACGTATTAA+GGG | + | chr3_2:90015112-90015131 | Msa0436440:intron | 20.0% |
| !!! | AGATTATATTTTGTTGACTT+TGG | + | chr3_2:90015765-90015784 | Msa0436440:intron | 20.0% |
| !! | ATTGTATAGAATGAAAACTT+TGG | + | chr3_2:90015790-90015809 | Msa0436440:intron | 20.0% |
| !!! | ATGAAAACTTTGGTATTTTT+TGG | + | chr3_2:90015800-90015819 | Msa0436440:intron | 20.0% |
| !!! | GAAATACTCCATTTTTTTAT+AGG | + | chr3_2:90016199-90016218 | Msa0436440:three_prime_UTR | 20.0% |
| !! | ATATATTATTTGCAACTAGT+CGG | - | chr3_2:90016308-90016327 | None:intergenic | 20.0% |
| !! | ACTAGTTGCAAATAATATAT+TGG | + | chr3_2:90016308-90016327 | Msa0436440:three_prime_UTR | 20.0% |
| ! | AAAGAGAATGATTAGAGAAA+TGG | - | chr3_2:90010654-90010673 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGTTTCTTCGTGT+AGG | + | chr3_2:90010740-90010759 | Msa0436440:intron | 25.0% |
| !! | TTTTCTTTCGAATTTCAACT+TGG | - | chr3_2:90010842-90010861 | None:intergenic | 25.0% |
| ! | AATTGGTTGAAATTGAATTC+TGG | + | chr3_2:90010953-90010972 | Msa0436440:intron | 25.0% |
| ! | TATAACATTGAGATTGTGAT+CGG | - | chr3_2:90010988-90011007 | None:intergenic | 25.0% |
| ! | CAAAAAACACAATGAAGATA+TGG | - | chr3_2:90011382-90011401 | None:intergenic | 25.0% |
| ! | TACATGTCAGATTAAACTTA+AGG | + | chr3_2:90011546-90011565 | Msa0436440:intron | 25.0% |
| ! | TATTTCCAAAATATGATGTG+TGG | + | chr3_2:90011574-90011593 | Msa0436440:intron | 25.0% |
| ! | CATGTAAAATATCTTCAACA+CGG | - | chr3_2:90011851-90011870 | None:intergenic | 25.0% |
| !! | TGTTGAAGATATTTTACATG+TGG | + | chr3_2:90011851-90011870 | Msa0436440:CDS | 25.0% |
| !! | GTTGAAGATATTTTACATGT+GGG | + | chr3_2:90011852-90011871 | Msa0436440:CDS | 25.0% |
| ! | CTACAAATGATAAAGATACT+TGG | - | chr3_2:90011975-90011994 | None:intergenic | 25.0% |
| !! | AGATTCTTGTTTACACTTAT+CGG | + | chr3_2:90011993-90012012 | Msa0436440:intron | 25.0% |
| !! | TTTGAAACAATCAATGAGAA+TGG | - | chr3_2:90012166-90012185 | None:intergenic | 25.0% |
| ! | TGATAATTATATACTGGCAT+AGG | + | chr3_2:90012186-90012205 | Msa0436440:intron | 25.0% |
| !! | CATGCTAACTTCAATTATTT+TGG | - | chr3_2:90012218-90012237 | None:intergenic | 25.0% |
| !!! | AGTTAGCATGTTTAATTTTG+TGG | + | chr3_2:90012228-90012247 | Msa0436440:intron | 25.0% |
| !! | TTGATTAGTTACACATATTC+TGG | + | chr3_2:90012671-90012690 | Msa0436440:intron | 25.0% |
| ! | AATCAAGAGTTTCAAACATA+AGG | + | chr3_2:90012702-90012721 | Msa0436440:intron | 25.0% |
| ! | CTGATATCTAATATTAATGC+AGG | - | chr3_2:90012924-90012943 | None:intergenic | 25.0% |
| ! | TTCCACAACTTATTTAATGA+AGG | + | chr3_2:90013174-90013193 | Msa0436440:intron | 25.0% |
| ! | ATCCTTCATTAAATAAGTTG+TGG | - | chr3_2:90013179-90013198 | None:intergenic | 25.0% |
| ! | GTTCTTATAGATTGGAATTA+AGG | - | chr3_2:90013454-90013473 | None:intergenic | 25.0% |
| ! | AATTCCAATCTATAAGAACA+AGG | + | chr3_2:90013455-90013474 | Msa0436440:intron | 25.0% |
| ! | ATTCCAATCTATAAGAACAA+GGG | + | chr3_2:90013456-90013475 | Msa0436440:intron | 25.0% |
| ! | AGTAAAAAGATAAGGACTTA+GGG | - | chr3_2:90013892-90013911 | None:intergenic | 25.0% |
| ! | AAGTAAAAAGATAAGGACTT+AGG | - | chr3_2:90013893-90013912 | None:intergenic | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | chr3_2:90014501-90014520 | Msa0436440:intron | 25.0% |
| !! | GTTTCTCTAATAGTTTTCTT+AGG | - | chr3_2:90014626-90014645 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | chr3_2:90014643-90014662 | Msa0436440:intron | 25.0% |
| ! | AAGAAAATACACATTGAGTA+AGG | - | chr3_2:90015265-90015284 | None:intergenic | 25.0% |
| !! | TTACTCAATGTGTATTTTCT+TGG | + | chr3_2:90015264-90015283 | Msa0436440:intron | 25.0% |
| !! | AATTGGTGAAAATGATCTTT+TGG | - | chr3_2:90015403-90015422 | None:intergenic | 25.0% |
| ! | AATATAATTTGATGGGAAGT+GGG | - | chr3_2:90015459-90015478 | None:intergenic | 25.0% |
| !!! | AGGAAAACTTTGGTATTTTT+TGG | + | chr3_2:90015501-90015520 | Msa0436440:intron | 25.0% |
| !!! | GTTGTCTCATTTTATTTAGT+TGG | + | chr3_2:90015550-90015569 | Msa0436440:intron | 25.0% |
| !! | TTTAGTTGGTTTATTAGTCT+TGG | + | chr3_2:90015564-90015583 | Msa0436440:intron | 25.0% |
| !!! | TTAGTTGGTTTATTAGTCTT+GGG | + | chr3_2:90015565-90015584 | Msa0436440:intron | 25.0% |
| !! | TTATTGTTTCTTCTGTTATG+TGG | + | chr3_2:90015693-90015712 | Msa0436440:intron | 25.0% |
| !! | TATTGTTTCTTCTGTTATGT+GGG | + | chr3_2:90015694-90015713 | Msa0436440:intron | 25.0% |
| !! | GTTGTCTCATTTTATGTATT+TGG | + | chr3_2:90015849-90015868 | Msa0436440:intron | 25.0% |
| ! | AGAAGAAACAAAAAAGAATG+TGG | - | chr3_2:90015997-90016016 | None:intergenic | 25.0% |
| !!! | TTTGTTTCTTCTGTTTTATG+TGG | + | chr3_2:90016005-90016024 | Msa0436440:intron | 25.0% |
| !!! | TTGTTTCTTCTGTTTTATGT+GGG | + | chr3_2:90016006-90016025 | Msa0436440:intron | 25.0% |
| TGAAACATATCAACTTGAGT+CGG | + | chr3_2:90010481-90010500 | Msa0436440:five_prime_UTR | 30.0% | |
| ATTACTTTGACATTTGTCTG+TGG | + | chr3_2:90010930-90010949 | Msa0436440:intron | 30.0% | |
| TTCAGTGTAATTACAAGTGT+CGG | + | chr3_2:90011127-90011146 | Msa0436440:intron | 30.0% | |
| AAGATATATGCTATGAAGCA+CGG | - | chr3_2:90011216-90011235 | None:intergenic | 30.0% | |
| ! | AAGTTCCACACATCATATTT+TGG | - | chr3_2:90011582-90011601 | None:intergenic | 30.0% |
| ! | GAACAATGAGATCTTTTAGA+AGG | - | chr3_2:90011896-90011915 | None:intergenic | 30.0% |
| TCTAAAAGATCTCATTGTTC+AGG | + | chr3_2:90011896-90011915 | Msa0436440:CDS | 30.0% | |
| TGCAAGATCAAACGATAATT+AGG | - | chr3_2:90011947-90011966 | None:intergenic | 30.0% | |
| ATGAAAAATTGGAGTGATCA+GGG | + | chr3_2:90012128-90012147 | Msa0436440:intron | 30.0% | |
| TCAATGAGAATGGTTCATTA+AGG | - | chr3_2:90012156-90012175 | None:intergenic | 30.0% | |
| GAAGAATAAGTTCATGTAGA+GGG | - | chr3_2:90012279-90012298 | None:intergenic | 30.0% | |
| AGAAGAATAAGTTCATGTAG+AGG | - | chr3_2:90012280-90012299 | None:intergenic | 30.0% | |
| AAGTTGTATTAGTGTGTGTT+TGG | + | chr3_2:90012760-90012779 | Msa0436440:intron | 30.0% | |
| AGTTGTATTAGTGTGTGTTT+GGG | + | chr3_2:90012761-90012780 | Msa0436440:intron | 30.0% | |
| CAACTAATCACATGTTTAGA+TGG | - | chr3_2:90012897-90012916 | None:intergenic | 30.0% | |
| AGCATAGCTGATTATATTTG+TGG | + | chr3_2:90012948-90012967 | Msa0436440:intron | 30.0% | |
| GAAGGATTATACCAATCTTT+AGG | + | chr3_2:90013003-90013022 | Msa0436440:intron | 30.0% | |
| AAGTGTATTAAGGATGAAGA+GGG | + | chr3_2:90013102-90013121 | Msa0436440:intron | 30.0% | |
| AGAGAGATATTAAGGATAGA+TGG | + | chr3_2:90013142-90013161 | Msa0436440:intron | 30.0% | |
| GGCGATAATAGTTATAGTTT+CGG | - | chr3_2:90013248-90013267 | None:intergenic | 30.0% | |
| GAAACTATAACTATTATCGC+CGG | + | chr3_2:90013247-90013266 | Msa0436440:intron | 30.0% | |
| ! | AACTTTTCAACGAGATTATG+AGG | + | chr3_2:90013394-90013413 | Msa0436440:intron | 30.0% |
| TTCCAATCTATAAGAACAAG+GGG | + | chr3_2:90013457-90013476 | Msa0436440:intron | 30.0% | |
| !! | GCACTTAGTTTTCATTGATT+TGG | + | chr3_2:90013686-90013705 | Msa0436440:intron | 30.0% |
| !!! | AGTTTTCATTGATTTGGAGA+AGG | + | chr3_2:90013692-90013711 | Msa0436440:intron | 30.0% |
| TATTGTTATGGGAAAATCTC+CGG | - | chr3_2:90013850-90013869 | None:intergenic | 30.0% | |
| !!! | TTTAGTTTTGGATGTACTGA+CGG | + | chr3_2:90013911-90013930 | Msa0436440:intron | 30.0% |
| TAGAAACAAGACGGAATATA+TGG | + | chr3_2:90014070-90014089 | Msa0436440:intron | 30.0% | |
| TGGAATGTAACTTCAGTAAA+AGG | + | chr3_2:90014090-90014109 | Msa0436440:intron | 30.0% | |
| ATATCTAAACCGTGTAACTT+GGG | - | chr3_2:90014162-90014181 | None:intergenic | 30.0% | |
| TTACACGGTTTAGATATCTT+GGG | + | chr3_2:90014165-90014184 | Msa0436440:intron | 30.0% | |
| ! | TCTACCAACTTTTCTACTAT+AGG | - | chr3_2:90014497-90014516 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | chr3_2:90014648-90014667 | None:intergenic | 30.0% |
| GTTCTATCAAAGACCATATT+TGG | - | chr3_2:90014683-90014702 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | + | chr3_2:90014687-90014706 | Msa0436440:intron | 30.0% | |
| TCTTTGATAGAACATTATGG+CGG | + | chr3_2:90014690-90014709 | Msa0436440:intron | 30.0% | |
| TGCACAAAAAAAATTACCTC+CGG | - | chr3_2:90014876-90014895 | None:intergenic | 30.0% | |
| !!! | AGCTGCCTTTCTTTTTTTTT+TGG | - | chr3_2:90014999-90015018 | None:intergenic | 30.0% |
| AAGGATATTAGTATGCAACA+AGG | + | chr3_2:90015164-90015183 | Msa0436440:intron | 30.0% | |
| AAATGTTAGAAGTTATCAGG+GGG | - | chr3_2:90015230-90015249 | None:intergenic | 30.0% | |
| CAAATGTTAGAAGTTATCAG+GGG | - | chr3_2:90015231-90015250 | None:intergenic | 30.0% | |
| GCAAATGTTAGAAGTTATCA+GGG | - | chr3_2:90015232-90015251 | None:intergenic | 30.0% | |
| !!! | AATTTTTGGCTTGAAAACCA+GGG | + | chr3_2:90015328-90015347 | Msa0436440:intron | 30.0% |
| !! | TAACGGATTGATGAGAATAT+GGG | - | chr3_2:90015432-90015451 | None:intergenic | 30.0% |
| !! | ATAACGGATTGATGAGAATA+TGG | - | chr3_2:90015433-90015452 | None:intergenic | 30.0% |
| ATATAATTTGATGGGAAGTG+GGG | - | chr3_2:90015458-90015477 | None:intergenic | 30.0% | |
| GAATATAATTTGATGGGAAG+TGG | - | chr3_2:90015460-90015479 | None:intergenic | 30.0% | |
| AAAAAACTACCACATATGTG+TGG | + | chr3_2:90015606-90015625 | Msa0436440:intron | 30.0% | |
| GAAGAAACAATAAAACGATG+TGG | - | chr3_2:90015686-90015705 | None:intergenic | 30.0% | |
| ATCTATAGCCAAATCTTCAT+TGG | - | chr3_2:90015949-90015968 | None:intergenic | 30.0% | |
| AAAATAAACTGGTTAGCATC+CGG | + | chr3_2:90016037-90016056 | Msa0436440:intron | 30.0% | |
| TTACATAAGCAATGACATTG+AGG | - | chr3_2:90016168-90016187 | None:intergenic | 30.0% | |
| CAACAGGTCCTATAAAAAAA+TGG | - | chr3_2:90016210-90016229 | None:intergenic | 30.0% | |
| CATCAAGGTGAAACTTATAT+TGG | - | chr3_2:90016276-90016295 | None:intergenic | 30.0% | |
| CAATATAAGTTTCACCTTGA+TGG | + | chr3_2:90016274-90016293 | Msa0436440:three_prime_UTR | 30.0% | |
| AACAGTAAACATCACAACAT+TGG | - | chr3_2:90016343-90016362 | None:intergenic | 30.0% | |
| GCATTGAAATTTGATCCTCT+CGG | + | chr3_2:90010697-90010716 | Msa0436440:intron | 35.0% | |
| AGATCAGACAAGAATATGAG+CGG | + | chr3_2:90010808-90010827 | Msa0436440:CDS | 35.0% | |
| TTGACATTTGTCTGTGGAAT+TGG | + | chr3_2:90010936-90010955 | Msa0436440:intron | 35.0% | |
| GGCATATATCCTATTAAGCA+CGG | + | chr3_2:90011029-90011048 | Msa0436440:intron | 35.0% | |
| TATCCTATTAAGCACGGATA+CGG | + | chr3_2:90011035-90011054 | Msa0436440:intron | 35.0% | |
| ATTTGCCAAAGCTTGATTTC+TGG | + | chr3_2:90011288-90011307 | Msa0436440:intron | 35.0% | |
| AATGACCAGAAATCAAGCTT+TGG | - | chr3_2:90011296-90011315 | None:intergenic | 35.0% | |
| ATGGAAGACGTGTTATATGT+CGG | + | chr3_2:90011422-90011441 | Msa0436440:intron | 35.0% | |
| GAATGTAATCAAAGGCAAGT+TGG | - | chr3_2:90011451-90011470 | None:intergenic | 35.0% | |
| CATGAAAAATTGGAGTGATC+AGG | + | chr3_2:90012127-90012146 | Msa0436440:intron | 35.0% | |
| TGAAAAATTGGAGTGATCAG+GGG | + | chr3_2:90012129-90012148 | Msa0436440:intron | 35.0% | |
| GAACATGAACTTTACCAGTA+GGG | - | chr3_2:90012571-90012590 | None:intergenic | 35.0% | |
| AGAACATGAACTTTACCAGT+AGG | - | chr3_2:90012572-90012591 | None:intergenic | 35.0% | |
| ACTGTATGGATCTGTTAATC+AGG | + | chr3_2:90012616-90012635 | Msa0436440:intron | 35.0% | |
| CTGTATGGATCTGTTAATCA+GGG | + | chr3_2:90012617-90012636 | Msa0436440:intron | 35.0% | |
| TGCTCAGTCAACTAAAAACA+CGG | - | chr3_2:90012731-90012750 | None:intergenic | 35.0% | |
| TAAATCACGACAGTACCATA+TGG | + | chr3_2:90012792-90012811 | Msa0436440:intron | 35.0% | |
| ATACCAATCTTTAGGTACCA+AGG | + | chr3_2:90013011-90013030 | Msa0436440:intron | 35.0% | |
| ATCTATATACAAGCTTGCGA+AGG | + | chr3_2:90013044-90013063 | Msa0436440:intron | 35.0% | |
| TCTATATACAAGCTTGCGAA+GGG | + | chr3_2:90013045-90013064 | Msa0436440:intron | 35.0% | |
| CATCCTTAATACACTTCACT+TGG | - | chr3_2:90013098-90013117 | None:intergenic | 35.0% | |
| GAAGTGTATTAAGGATGAAG+AGG | + | chr3_2:90013101-90013120 | Msa0436440:intron | 35.0% | |
| ACTTCAATAGGTATGTTGTC+CGG | - | chr3_2:90013333-90013352 | None:intergenic | 35.0% | |
| ACAACATACCTATTGAAGTG+TGG | + | chr3_2:90013334-90013353 | Msa0436440:intron | 35.0% | |
| ! | AGACTTTTCCACACTTCAAT+AGG | - | chr3_2:90013345-90013364 | None:intergenic | 35.0% |
| ATTGAAGTGTGGAAAAGTCT+TGG | + | chr3_2:90013345-90013364 | Msa0436440:intron | 35.0% | |
| TCCAATCTATAAGAACAAGG+GGG | + | chr3_2:90013458-90013477 | Msa0436440:intron | 35.0% | |
| TACAAGATTGCGCGAATTAT+AGG | + | chr3_2:90013484-90013503 | Msa0436440:intron | 35.0% | |
| ACAAGATTGCGCGAATTATA+GGG | + | chr3_2:90013485-90013504 | Msa0436440:intron | 35.0% | |
| TGAGTCATACCATGAAGTTA+TGG | + | chr3_2:90013520-90013539 | Msa0436440:intron | 35.0% | |
| GAGTCATACCATGAAGTTAT+GGG | + | chr3_2:90013521-90013540 | Msa0436440:intron | 35.0% | |
| ATACCATGAAGTTATGGGAA+AGG | + | chr3_2:90013526-90013545 | Msa0436440:intron | 35.0% | |
| TACCATGAAGTTATGGGAAA+GGG | + | chr3_2:90013527-90013546 | Msa0436440:intron | 35.0% | |
| AAGAAAAGAGACTCACGTTA+CGG | + | chr3_2:90013566-90013585 | Msa0436440:intron | 35.0% | |
| !!! | AACCAATTTGGTTTTATGCC+TGG | + | chr3_2:90013591-90013610 | Msa0436440:intron | 35.0% |
| !!! | ACCAATTTGGTTTTATGCCT+GGG | + | chr3_2:90013592-90013611 | Msa0436440:intron | 35.0% |
| !! | ATCCTGGATAGCTCTAATAT+AGG | - | chr3_2:90013781-90013800 | None:intergenic | 35.0% |
| ! | GGAGATTTTCCCATAACAAT+AGG | + | chr3_2:90013849-90013868 | Msa0436440:intron | 35.0% |
| ! | TCTGCAAAAAGCATACATCT+CGG | - | chr3_2:90013957-90013976 | None:intergenic | 35.0% |
| AACTTCAGTAAAAGGAGAAG+TGG | + | chr3_2:90014098-90014117 | Msa0436440:intron | 35.0% | |
| ACTTCAGTAAAAGGAGAAGT+GGG | + | chr3_2:90014099-90014118 | Msa0436440:intron | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | + | chr3_2:90014150-90014169 | Msa0436440:intron | 35.0% | |
| TATCTAAACCGTGTAACTTG+GGG | - | chr3_2:90014161-90014180 | None:intergenic | 35.0% | |
| GATATCTAAACCGTGTAACT+TGG | - | chr3_2:90014163-90014182 | None:intergenic | 35.0% | |
| GTTACACGGTTTAGATATCT+TGG | + | chr3_2:90014164-90014183 | Msa0436440:intron | 35.0% | |
| !! | TTCTCCGTCATTTTGTACTA+TGG | - | chr3_2:90014192-90014211 | None:intergenic | 35.0% |
| TACATCATCGTATTCAAGCT+GGG | + | chr3_2:90014225-90014244 | Msa0436440:intron | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | + | chr3_2:90014290-90014309 | Msa0436440:intron | 35.0% |
| AACTTTCCTTTCAGCTTAAG+TGG | - | chr3_2:90014299-90014318 | None:intergenic | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | + | chr3_2:90014303-90014322 | Msa0436440:intron | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | + | chr3_2:90014438-90014457 | Msa0436440:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | + | chr3_2:90014490-90014509 | Msa0436440:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | + | chr3_2:90014510-90014529 | Msa0436440:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | + | chr3_2:90014515-90014534 | Msa0436440:intron | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | - | chr3_2:90014567-90014586 | None:intergenic | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | + | chr3_2:90014568-90014587 | Msa0436440:intron | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | + | chr3_2:90014571-90014590 | Msa0436440:intron | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr3_2:90014655-90014674 | Msa0436440:intron | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr3_2:90014667-90014686 | Msa0436440:intron | 35.0% |
| ! | TGTTGTTGTTGTTGTTGTTG+TGG | + | chr3_2:90014756-90014775 | Msa0436440:intron | 35.0% |
| GTGAAAATACTCTTGATGCA+CGG | + | chr3_2:90014823-90014842 | Msa0436440:CDS | 35.0% | |
| GTATTAAGGGTAAGATAGCT+GGG | + | chr3_2:90015125-90015144 | Msa0436440:intron | 35.0% | |
| TATTAAGGGTAAGATAGCTG+GGG | + | chr3_2:90015126-90015145 | Msa0436440:intron | 35.0% | |
| CGCAAATGTTAGAAGTTATC+AGG | - | chr3_2:90015233-90015252 | None:intergenic | 35.0% | |
| !!! | GAATTTTTGGCTTGAAAACC+AGG | + | chr3_2:90015327-90015346 | Msa0436440:intron | 35.0% |
| GAGCAGTATAGCAAATACAA+AGG | - | chr3_2:90015381-90015400 | None:intergenic | 35.0% | |
| GAGAATATGGGAGGAATAAT+TGG | - | chr3_2:90015420-90015439 | None:intergenic | 35.0% | |
| TCCTGTTTACGAGAATATGT+GGG | + | chr3_2:90015528-90015547 | Msa0436440:intron | 35.0% | |
| ! | CAAAGGATGATTTGGCAAAT+AGG | + | chr3_2:90015631-90015650 | Msa0436440:intron | 35.0% |
| GGTCATATGACAATCAAAGT+TGG | + | chr3_2:90015652-90015671 | Msa0436440:intron | 35.0% | |
| TGACAATCAAAGTTGGCAAT+AGG | + | chr3_2:90015659-90015678 | Msa0436440:intron | 35.0% | |
| !!! | TTTTTTGGAGTGTCCTATGT+AGG | + | chr3_2:90015815-90015834 | Msa0436440:intron | 35.0% |
| !! | GGGAAGTGTTGAAAATAAAC+TGG | + | chr3_2:90016026-90016045 | Msa0436440:intron | 35.0% |
| ATTGAGGATATGTATTCCAG+GGG | - | chr3_2:90016152-90016171 | None:intergenic | 35.0% | |
| CATTGAGGATATGTATTCCA+GGG | - | chr3_2:90016153-90016172 | None:intergenic | 35.0% | |
| ACATTGAGGATATGTATTCC+AGG | - | chr3_2:90016154-90016173 | None:intergenic | 35.0% | |
| ATACACGATATGAGAACAAC+AGG | - | chr3_2:90016226-90016245 | None:intergenic | 35.0% | |
| TGTTCTCATATCGTGTATGA+TGG | + | chr3_2:90016228-90016247 | Msa0436440:three_prime_UTR | 35.0% | |
| GTTCTCATATCGTGTATGAT+GGG | + | chr3_2:90016229-90016248 | Msa0436440:three_prime_UTR | 35.0% | |
| TTCTCATATCGTGTATGATG+GGG | + | chr3_2:90016230-90016249 | Msa0436440:three_prime_UTR | 35.0% | |
| CAGGAAAACAAGTTCGTCAA+TGG | - | chr3_2:90010507-90010526 | None:intergenic | 40.0% | |
| TCTTCTCCGAAAATGAACGA+CGG | + | chr3_2:90010531-90010550 | Msa0436440:exon | 40.0% | |
| ! | ACATCACCGTCGTTCATTTT+CGG | - | chr3_2:90010540-90010559 | None:intergenic | 40.0% |
| ! | CTTTTTCTTCAGCTTCTTGG+CGG | - | chr3_2:90010596-90010615 | None:intergenic | 40.0% |
| !! | TGGCTTTTTCTTCAGCTTCT+TGG | - | chr3_2:90010599-90010618 | None:intergenic | 40.0% |
| CAATATCGAGAAGCTTCAGT+TGG | + | chr3_2:90010767-90010786 | Msa0436440:CDS | 40.0% | |
| ! | TTGTGTCACTATCACATGCA+AGG | - | chr3_2:90011250-90011269 | None:intergenic | 40.0% |
| !! | GATTTCTGGTCATTGTCTAG+TGG | + | chr3_2:90011302-90011321 | Msa0436440:intron | 40.0% |
| TGTAGAACTGACACTTCTGA+TGG | + | chr3_2:90011403-90011422 | Msa0436440:intron | 40.0% | |
| ACTCACTGCCACAAACAATT+GGG | - | chr3_2:90011716-90011735 | None:intergenic | 40.0% | |
| TACTCACTGCCACAAACAAT+TGG | - | chr3_2:90011717-90011736 | None:intergenic | 40.0% | |
| AATGAAAGAAGTTGCAGCCA+AGG | + | chr3_2:90011800-90011819 | Msa0436440:CDS | 40.0% | |
| GCTCACATTCAAAAGTTCCT+TGG | - | chr3_2:90011820-90011839 | None:intergenic | 40.0% | |
| TATCTTCAACACGGTGATGA+CGG | - | chr3_2:90011842-90011861 | None:intergenic | 40.0% | |
| AGTTCATGTAGAGGGAAAGA+GGG | - | chr3_2:90012271-90012290 | None:intergenic | 40.0% | |
| AAGTTCATGTAGAGGGAAAG+AGG | - | chr3_2:90012272-90012291 | None:intergenic | 40.0% | |
| ACATACTTGTGCATAGAAGG+CGG | - | chr3_2:90012318-90012337 | None:intergenic | 40.0% | |
| TCCACATACTTGTGCATAGA+AGG | - | chr3_2:90012321-90012340 | None:intergenic | 40.0% | |
| TATGCACAAGTATGTGGACT+AGG | + | chr3_2:90012323-90012342 | Msa0436440:intron | 40.0% | |
| ! | CTTCTGTCTTGTTGAGATGT+CGG | + | chr3_2:90012401-90012420 | Msa0436440:CDS | 40.0% |
| !! | CAGGAGTATTCTGAAAAAGC+AGG | + | chr3_2:90012469-90012488 | Msa0436440:CDS | 40.0% |
| TTGTGGTCAACAATGATCTC+TGG | - | chr3_2:90012505-90012524 | None:intergenic | 40.0% | |
| TGTAGAGTCGTTTGACCATA+TGG | - | chr3_2:90012810-90012829 | None:intergenic | 40.0% | |
| CAATCTTTAGGTACCAAGGA+GGG | + | chr3_2:90013015-90013034 | Msa0436440:intron | 40.0% | |
| AATCTTTAGGTACCAAGGAG+GGG | + | chr3_2:90013016-90013035 | Msa0436440:intron | 40.0% | |
| TAATACACTTCACTTGGTCC+AGG | - | chr3_2:90013092-90013111 | None:intergenic | 40.0% | |
| GGACCAAGTGAAGTGTATTA+AGG | + | chr3_2:90013092-90013111 | Msa0436440:intron | 40.0% | |
| !! | GGATGAAGAGGGTATAGTTT+TGG | + | chr3_2:90013113-90013132 | Msa0436440:intron | 40.0% |
| GGTGCAAGAGAGAGATATTA+AGG | + | chr3_2:90013134-90013153 | Msa0436440:intron | 40.0% | |
| AGATCTTACCAGACTCTAAC+AGG | + | chr3_2:90013202-90013221 | Msa0436440:intron | 40.0% | |
| ATGTCTAACCTGTTAGAGTC+TGG | - | chr3_2:90013213-90013232 | None:intergenic | 40.0% | |
| TAACAGGTTAGACATCAGAG+AGG | + | chr3_2:90013218-90013237 | Msa0436440:intron | 40.0% | |
| TAACTATTATCGCCGGATTC+AGG | + | chr3_2:90013254-90013273 | Msa0436440:intron | 40.0% | |
| !! | AGGTGAAAGAAGCGTTGAAA+AGG | + | chr3_2:90013283-90013302 | Msa0436440:intron | 40.0% |
| GCGTTGAAAAGGATGAGTAA+TGG | + | chr3_2:90013294-90013313 | Msa0436440:intron | 40.0% | |
| GAAAAGGATGAGTAATGGCA+AGG | + | chr3_2:90013299-90013318 | Msa0436440:intron | 40.0% | |
| TATGAGGACGAAGAAAATGC+CGG | + | chr3_2:90013410-90013429 | Msa0436440:intron | 40.0% | |
| TCCCCCTTGTTCTTATAGAT+TGG | - | chr3_2:90013462-90013481 | None:intergenic | 40.0% | |
| CAAGATTGCGCGAATTATAG+GGG | + | chr3_2:90013486-90013505 | Msa0436440:intron | 40.0% | |
| TACCCTTTCCCATAACTTCA+TGG | - | chr3_2:90013532-90013551 | None:intergenic | 40.0% | |
| CACGTTACGGATAACCAATT+TGG | + | chr3_2:90013579-90013598 | Msa0436440:intron | 40.0% | |
| TCCCAGGCATAAAACCAAAT+TGG | - | chr3_2:90013596-90013615 | None:intergenic | 40.0% | |
| !!! | AATTTGGTTTTATGCCTGGG+AGG | + | chr3_2:90013595-90013614 | Msa0436440:intron | 40.0% |
| ! | GAGTACCTAGAGAGATTTTG+TGG | + | chr3_2:90013724-90013743 | Msa0436440:intron | 40.0% |
| GCTTTCCACAAAATCTCTCT+AGG | - | chr3_2:90013732-90013751 | None:intergenic | 40.0% | |
| TGCCTATATTAGAGCTATCC+AGG | + | chr3_2:90013776-90013795 | Msa0436440:intron | 40.0% | |
| AGCTATCCAGGATATGTATG+AGG | + | chr3_2:90013788-90013807 | Msa0436440:intron | 40.0% | |
| GCTATCCAGGATATGTATGA+GGG | + | chr3_2:90013789-90013808 | Msa0436440:intron | 40.0% | |
| CTATCCAGGATATGTATGAG+GGG | + | chr3_2:90013790-90013809 | Msa0436440:intron | 40.0% | |
| TATCCAGGATATGTATGAGG+GGG | + | chr3_2:90013791-90013810 | Msa0436440:intron | 40.0% | |
| TGGTGCAGTCCTATTGTTAT+GGG | - | chr3_2:90013861-90013880 | None:intergenic | 40.0% | |
| TTGGTGCAGTCCTATTGTTA+TGG | - | chr3_2:90013862-90013881 | None:intergenic | 40.0% | |
| ATAACAATAGGACTGCACCA+AGG | + | chr3_2:90013861-90013880 | Msa0436440:intron | 40.0% | |
| TAACAATAGGACTGCACCAA+GGG | + | chr3_2:90013862-90013881 | Msa0436440:intron | 40.0% | |
| !! | ATTCCGTCTTGTTTCTACTC+AGG | - | chr3_2:90014067-90014086 | None:intergenic | 40.0% |
| TCTACCTTAGAGGTGAAAGT+TGG | + | chr3_2:90014122-90014141 | Msa0436440:intron | 40.0% | |
| ATCTCCAACTTTCACCTCTA+AGG | - | chr3_2:90014129-90014148 | None:intergenic | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | + | chr3_2:90014185-90014204 | Msa0436440:intron | 40.0% | |
| GTACATCATCGTATTCAAGC+TGG | + | chr3_2:90014224-90014243 | Msa0436440:intron | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | + | chr3_2:90014432-90014451 | Msa0436440:intron | 40.0% | |
| TGACATCATTAGAGAGAGAG+TGG | + | chr3_2:90014463-90014482 | Msa0436440:intron | 40.0% | |
| GACATCATTAGAGAGAGAGT+GGG | + | chr3_2:90014464-90014483 | Msa0436440:intron | 40.0% | |
| ACATCATTAGAGAGAGAGTG+GGG | + | chr3_2:90014465-90014484 | Msa0436440:intron | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | + | chr3_2:90014596-90014615 | Msa0436440:intron | 40.0% | |
| ! | TGTTGTTGTTGTTGTTGTGG+TGG | + | chr3_2:90014765-90014784 | Msa0436440:intron | 40.0% |
| ! | GTTGTTGTTGTTGTTGTGGT+GGG | + | chr3_2:90014766-90014785 | Msa0436440:intron | 40.0% |
| ! | TTGTTGTTGTTGTTGTGGTG+GGG | + | chr3_2:90014767-90014786 | Msa0436440:intron | 40.0% |
| AGTGTTCCGTAAAAAGCTTC+CGG | + | chr3_2:90014854-90014873 | Msa0436440:CDS | 40.0% | |
| ! | TTACCTCCGGAAGCTTTTTA+CGG | - | chr3_2:90014863-90014882 | None:intergenic | 40.0% |
| CGTATTAAGGGTAAGATAGC+TGG | + | chr3_2:90015124-90015143 | Msa0436440:intron | 40.0% | |
| ! | AAAGGTGCAAACAGAGAGAA+GGG | - | chr3_2:90015363-90015382 | None:intergenic | 40.0% |
| GATATCTGGGAGGAAAACTT+TGG | + | chr3_2:90015491-90015510 | Msa0436440:intron | 40.0% | |
| GTCCTGTTTACGAGAATATG+TGG | + | chr3_2:90015527-90015546 | Msa0436440:intron | 40.0% | |
| ACCCACATATTCTCGTAAAC+AGG | - | chr3_2:90015532-90015551 | None:intergenic | 40.0% | |
| TGGGTGATGTTGAAAATGAC+TGG | + | chr3_2:90015713-90015732 | Msa0436440:intron | 40.0% | |
| ! | GAAAATGACTGGTTAGCATC+TGG | + | chr3_2:90015724-90015743 | Msa0436440:intron | 40.0% |
| TCCTATGTAGGAGAATACGA+GGG | + | chr3_2:90015827-90015846 | Msa0436440:intron | 40.0% | |
| !!! | GGTCTTCTGCTATTTTGTCT+TGG | + | chr3_2:90015878-90015897 | Msa0436440:intron | 40.0% |
| CACATGAGTGCAAACATATG+TGG | - | chr3_2:90015921-90015940 | None:intergenic | 40.0% | |
| CATATGTTTGCACTCATGTG+TGG | + | chr3_2:90015921-90015940 | Msa0436440:intron | 40.0% | |
| CGAGAAACTTCATTAGACAC+CGG | - | chr3_2:90016059-90016078 | None:intergenic | 40.0% | |
| TCTCATATCGTGTATGATGG+GGG | + | chr3_2:90016231-90016250 | Msa0436440:three_prime_UTR | 40.0% | |
| ! | CATTTTCGGAGAAGATCGAC+AGG | - | chr3_2:90010526-90010545 | None:intergenic | 45.0% |
| CTCTAAGCAAATCCACCAGA+TGG | + | chr3_2:90010560-90010579 | Msa0436440:CDS | 45.0% | |
| GGATAAATCTCACCATCTGG+TGG | - | chr3_2:90010575-90010594 | None:intergenic | 45.0% | |
| AGGAGAATTACATTGCCGAG+AGG | - | chr3_2:90010715-90010734 | None:intergenic | 45.0% | |
| TGTCCGTATCCGTGCTTAAT+AGG | - | chr3_2:90011041-90011060 | None:intergenic | 45.0% | |
| ATTAAGCACGGATACGGACA+CGG | + | chr3_2:90011041-90011060 | Msa0436440:intron | 45.0% | |
| !! | ATGAAGCACTGAGAGAGACA+CGG | - | chr3_2:90011527-90011546 | None:intergenic | 45.0% |
| TTCTGTGGCCCAATTGTTTG+TGG | + | chr3_2:90011705-90011724 | Msa0436440:intron | 45.0% | |
| CAATGCAGCTGAATGCTTCT+CGG | + | chr3_2:90011739-90011758 | Msa0436440:CDS | 45.0% | |
| ATGTAGAGGGAAAGAGGGAA+GGG | - | chr3_2:90012266-90012285 | None:intergenic | 45.0% | |
| GCCTTCTATGCACAAGTATG+TGG | + | chr3_2:90012317-90012336 | Msa0436440:intron | 45.0% | |
| CGACATCTCAACAAGACAGA+AGG | - | chr3_2:90012403-90012422 | None:intergenic | 45.0% | |
| TGGTCAACAATGATCTCTGG+TGG | - | chr3_2:90012502-90012521 | None:intergenic | 45.0% | |
| CAGGTGGAAGATAGACATTG+TGG | - | chr3_2:90012522-90012541 | None:intergenic | 45.0% | |
| ! | TCGTGAGTGTTGTGATGCTT+GGG | - | chr3_2:90012547-90012566 | None:intergenic | 45.0% |
| ! | TTCGTGAGTGTTGTGATGCT+TGG | - | chr3_2:90012548-90012567 | None:intergenic | 45.0% |
| CGTAAGAAAGCCTTCTCTGA+TGG | + | chr3_2:90012871-90012890 | Msa0436440:intron | 45.0% | |
| GTTTAGATGGCCATCAGAGA+AGG | - | chr3_2:90012884-90012903 | None:intergenic | 45.0% | |
| GCGAGAACTCAAGCATTTGA+AGG | + | chr3_2:90012985-90013004 | Msa0436440:intron | 45.0% | |
| CCTCCTTGGTACCTAAAGAT+TGG | - | chr3_2:90013017-90013036 | None:intergenic | 45.0% | |
| CCAATCTTTAGGTACCAAGG+AGG | + | chr3_2:90013014-90013033 | Msa0436440:intron | 45.0% | |
| ATCTTTAGGTACCAAGGAGG+GGG | + | chr3_2:90013017-90013036 | Msa0436440:intron | 45.0% | |
| TATAGATTTCTCCCCCTCCT+TGG | - | chr3_2:90013031-90013050 | None:intergenic | 45.0% | |
| AGAACGAAAGACAAGAGACC+TGG | + | chr3_2:90013071-90013090 | Msa0436440:intron | 45.0% | |
| ATGAGTAATGGCAAGGCAGT+TGG | + | chr3_2:90013306-90013325 | Msa0436440:intron | 45.0% | |
| TGAGTAATGGCAAGGCAGTT+GGG | + | chr3_2:90013307-90013326 | Msa0436440:intron | 45.0% | |
| TGGAAAAGTCTTGGCGATAG+AGG | + | chr3_2:90013354-90013373 | Msa0436440:intron | 45.0% | |
| AGTCTTGGCGATAGAGGAAT+TGG | + | chr3_2:90013360-90013379 | Msa0436440:intron | 45.0% | |
| GTCTTGGCGATAGAGGAATT+GGG | + | chr3_2:90013361-90013380 | Msa0436440:intron | 45.0% | |
| ! | AGAGATTTTGTGGAAAGCCC+TGG | + | chr3_2:90013734-90013753 | Msa0436440:intron | 45.0% |
| !! | TACATCTCGGTGCTAACTCT+TGG | - | chr3_2:90013944-90013963 | None:intergenic | 45.0% |
| ! | GCAGATGATGTAGTCTTGCT+TGG | + | chr3_2:90013972-90013991 | Msa0436440:intron | 45.0% |
| ATCATCGTATTCAAGCTGGG+TGG | + | chr3_2:90014228-90014247 | Msa0436440:intron | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | + | chr3_2:90014237-90014256 | Msa0436440:intron | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | + | chr3_2:90014251-90014270 | Msa0436440:intron | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | - | chr3_2:90014270-90014289 | None:intergenic | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | + | chr3_2:90014337-90014356 | Msa0436440:intron | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | - | chr3_2:90014341-90014360 | None:intergenic | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | + | chr3_2:90014345-90014364 | Msa0436440:intron | 45.0% | |
| ! | GTTGTATGGTACGGAGTGTT+GGG | + | chr3_2:90014346-90014365 | Msa0436440:intron | 45.0% |
| CGCTTACTTTACTCTCGTGT+TGG | - | chr3_2:90014382-90014401 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | + | chr3_2:90014385-90014404 | Msa0436440:intron | 45.0% | |
| CATCATTAGAGAGAGAGTGG+GGG | + | chr3_2:90014466-90014485 | Msa0436440:intron | 45.0% | |
| GGTTTGGACATGTAGAGAGA+AGG | + | chr3_2:90014531-90014550 | Msa0436440:intron | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr3_2:90014580-90014599 | Msa0436440:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | chr3_2:90014590-90014609 | Msa0436440:intron | 45.0% | |
| AACGCCTTATCCCACTAAGT+GGG | - | chr3_2:90014737-90014756 | None:intergenic | 45.0% | |
| AAATACTCTTGATGCACGGC+TGG | + | chr3_2:90014827-90014846 | Msa0436440:CDS | 45.0% | |
| AAGGTGCAAACAGAGAGAAG+GGG | - | chr3_2:90015362-90015381 | None:intergenic | 45.0% | |
| ! | CAAAGGTGCAAACAGAGAGA+AGG | - | chr3_2:90015364-90015383 | None:intergenic | 45.0% |
| CGGATTGATGAGAATATGGG+AGG | - | chr3_2:90015429-90015448 | None:intergenic | 45.0% | |
| ! | GTTTTCCTCCCAGATATCCA+AGG | - | chr3_2:90015489-90015508 | None:intergenic | 45.0% |
| ACCACATATGTGTGGCTCAA+AGG | + | chr3_2:90015614-90015633 | Msa0436440:intron | 45.0% | |
| TCCTTTGAGCCACACATATG+TGG | - | chr3_2:90015618-90015637 | None:intergenic | 45.0% | |
| GTGTGGCTCAAAGGATGATT+TGG | + | chr3_2:90015623-90015642 | Msa0436440:intron | 45.0% | |
| GTCCTATGTAGGAGAATACG+AGG | + | chr3_2:90015826-90015845 | Msa0436440:intron | 45.0% | |
| ACCCTCGTATTCTCCTACAT+AGG | - | chr3_2:90015831-90015850 | None:intergenic | 45.0% | |
| GTGTGGCTCCAATGAAGATT+TGG | + | chr3_2:90015938-90015957 | Msa0436440:intron | 45.0% | |
| ! | CTTGTCCAAAGAGCTGCTTT+CGG | - | chr3_2:90016097-90016116 | None:intergenic | 45.0% |
| ! | TCGATTACATTTGTTGCCCC+TGG | + | chr3_2:90016133-90016152 | Msa0436440:three_prime_UTR | 45.0% |
| AGTCGGAGAAAACACCATCA+AGG | - | chr3_2:90016291-90016310 | None:intergenic | 45.0% | |
| GGCGGATAAATCTCACCATC+TGG | - | chr3_2:90010578-90010597 | None:intergenic | 50.0% | |
| GATCTCTCTCTCTGCTGAAG+AGG | + | chr3_2:90010623-90010642 | Msa0436440:CDS | 50.0% | |
| !! | TACAAGTGTCGGTGTCGTGT+CGG | + | chr3_2:90011138-90011157 | Msa0436440:intron | 50.0% |
| TATGAAGCACGGACACTCCT+CGG | - | chr3_2:90011205-90011224 | None:intergenic | 50.0% | |
| ! | ATCTGGTGTCAACGTGTGTC+TGG | + | chr3_2:90011498-90011517 | Msa0436440:intron | 50.0% |
| CATGTAGAGGGAAAGAGGGA+AGG | - | chr3_2:90012267-90012286 | None:intergenic | 50.0% | |
| TCGGAAACATGACGTGCACT+TGG | + | chr3_2:90012420-90012439 | Msa0436440:CDS | 50.0% | |
| GCACTTGGTAGAACATGTGC+TGG | + | chr3_2:90012435-90012454 | Msa0436440:CDS | 50.0% | |
| ACAACACTCACGAACCCTAC+TGG | + | chr3_2:90012554-90012573 | Msa0436440:CDS | 50.0% | |
| CAGGTTAGACATCAGAGAGG+AGG | + | chr3_2:90013221-90013240 | Msa0436440:intron | 50.0% | |
| TTGGCGATAGAGGAATTGGG+TGG | + | chr3_2:90013364-90013383 | Msa0436440:intron | 50.0% | |
| TGGAAAGCCCTGGAGAAGAA+AGG | + | chr3_2:90013744-90013763 | Msa0436440:intron | 50.0% | |
| GGAAAGCCCTGGAGAAGAAA+GGG | + | chr3_2:90013745-90013764 | Msa0436440:intron | 50.0% | |
| GAAAGCCCTGGAGAAGAAAG+GGG | + | chr3_2:90013746-90013765 | Msa0436440:intron | 50.0% | |
| TCTCACCCCTTTCTTCTCCA+GGG | - | chr3_2:90013754-90013773 | None:intergenic | 50.0% | |
| ATCTCACCCCTTTCTTCTCC+AGG | - | chr3_2:90013755-90013774 | None:intergenic | 50.0% | |
| AAGCCCCCTCATACATATCC+TGG | - | chr3_2:90013797-90013816 | None:intergenic | 50.0% | |
| AAGGACTTAGGGTTGACCCT+TGG | - | chr3_2:90013881-90013900 | None:intergenic | 50.0% | |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | + | chr3_2:90013982-90014001 | Msa0436440:intron | 50.0% |
| ! | AGTCTTGCTTGGTGAGTCGA+GGG | + | chr3_2:90013983-90014002 | Msa0436440:intron | 50.0% |
| GAGTCGAGGGAGGAGTTAAA+CGG | + | chr3_2:90013996-90014015 | Msa0436440:intron | 50.0% | |
| AGTCGAGGGAGGAGTTAAAC+GGG | + | chr3_2:90013997-90014016 | Msa0436440:intron | 50.0% | |
| TAAACGGGAGGCTAGAGACT+TGG | + | chr3_2:90014012-90014031 | Msa0436440:intron | 50.0% | |
| ! | AGGCAAGCCTTAGAAGCGTA+CGG | + | chr3_2:90014035-90014054 | Msa0436440:intron | 50.0% |
| !! | CCGTCTTGTTTCTACTCAGG+CGG | - | chr3_2:90014064-90014083 | None:intergenic | 50.0% |
| CCGCCTGAGTAGAAACAAGA+CGG | + | chr3_2:90014061-90014080 | Msa0436440:intron | 50.0% | |
| GAGAAGTGGGTCTACCTTAG+AGG | + | chr3_2:90014112-90014131 | Msa0436440:intron | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | + | chr3_2:90014332-90014351 | Msa0436440:intron | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | + | chr3_2:90014393-90014412 | Msa0436440:intron | 50.0% |
| AGGATGTTGCGTTGGATGAG+TGG | + | chr3_2:90014413-90014432 | Msa0436440:intron | 50.0% | |
| TCTTCTTACCACGGCGTCTA+CGG | - | chr3_2:90014558-90014577 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr3_2:90014732-90014751 | None:intergenic | 50.0% | |
| ACGCCTTATCCCACTAAGTG+GGG | - | chr3_2:90014736-90014755 | None:intergenic | 50.0% | |
| CAACGCCTTATCCCACTAAG+TGG | - | chr3_2:90014738-90014757 | None:intergenic | 50.0% | |
| ! | TTGTTGTTGTTGTGGTGGGG+TGG | + | chr3_2:90014770-90014789 | Msa0436440:intron | 50.0% |
| GTTCCGTAAAAAGCTTCCGG+AGG | + | chr3_2:90014857-90014876 | Msa0436440:CDS | 50.0% | |
| TAAGGGTAAGATAGCTGGGG+AGG | + | chr3_2:90015129-90015148 | Msa0436440:intron | 50.0% | |
| AAGGGTAAGATAGCTGGGGA+GGG | + | chr3_2:90015130-90015149 | Msa0436440:intron | 50.0% | |
| GAGAAGGGGAAAAATCTCCC+TGG | - | chr3_2:90015348-90015367 | None:intergenic | 50.0% | |
| GATGGGAAGTGGGGTGATAA+CGG | - | chr3_2:90015449-90015468 | None:intergenic | 50.0% | |
| GTTCACCTTGGATATCTGGG+AGG | + | chr3_2:90015481-90015500 | Msa0436440:intron | 50.0% | |
| ! | AAGAGCTGCTTTCGGATCTG+TGG | - | chr3_2:90016089-90016108 | None:intergenic | 50.0% |
| CAGATCCGAAAGCAGCTCTT+TGG | + | chr3_2:90016089-90016108 | Msa0436440:intron | 50.0% | |
| AGCAGAGAGAGAGATCTCGC+TGG | - | chr3_2:90010619-90010638 | None:intergenic | 55.0% | |
| TCACCTCGTGCTCCTGAATC+CGG | - | chr3_2:90013269-90013288 | None:intergenic | 55.0% | |
| TAATGGCAAGGCAGTTGGGC+CGG | + | chr3_2:90013311-90013330 | Msa0436440:intron | 55.0% | |
| CGAAGAAAATGCCGGACGAG+TGG | + | chr3_2:90013418-90013437 | Msa0436440:intron | 55.0% | |
| GTGCTTCTTCTCCACTCGTC+CGG | - | chr3_2:90013432-90013451 | None:intergenic | 55.0% | |
| TATGCCTGGGAGGTCGACTA+TGG | + | chr3_2:90013605-90013624 | Msa0436440:intron | 55.0% | |
| CTACCTACTTCGACGCGTGA+TGG | + | chr3_2:90013635-90013654 | Msa0436440:intron | 55.0% | |
| ! | GACGCGTGATGGAGCGATAT+CGG | + | chr3_2:90013646-90013665 | Msa0436440:intron | 55.0% |
| ! | CGTGATGGAGCGATATCGGA+CGG | + | chr3_2:90013650-90013669 | Msa0436440:intron | 55.0% |
| TTCGACTAGTGTGAGGACGC+AGG | + | chr3_2:90013815-90013834 | Msa0436440:intron | 55.0% | |
| ACTAGTGTGAGGACGCAGGA+TGG | + | chr3_2:90013819-90013838 | Msa0436440:intron | 55.0% | |
| CTAGTGTGAGGACGCAGGAT+GGG | + | chr3_2:90013820-90013839 | Msa0436440:intron | 55.0% | |
| TAGTGTGAGGACGCAGGATG+GGG | + | chr3_2:90013821-90013840 | Msa0436440:intron | 55.0% | |
| GCGGAAACCGTACGCTTCTA+AGG | - | chr3_2:90014045-90014064 | None:intergenic | 55.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | + | chr3_2:90014319-90014338 | Msa0436440:intron | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | + | chr3_2:90014405-90014424 | Msa0436440:intron | 55.0% | |
| CTTCTTACCACGGCGTCTAC+GGG | - | chr3_2:90014557-90014576 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr3_2:90014724-90014743 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr3_2:90014723-90014742 | Msa0436440:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr3_2:90014724-90014743 | Msa0436440:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr3_2:90014730-90014749 | Msa0436440:intron | 55.0% | |
| ! | TTGTTGTGGTGGGGTGGTGT+TGG | + | chr3_2:90014776-90014795 | Msa0436440:intron | 55.0% |
| !! | GTGGTGTTGGCTTCTCGTGA+TGG | + | chr3_2:90014789-90014808 | Msa0436440:CDS | 55.0% |
| ATAGCTGGGGAGGGACTTCA+GGG | + | chr3_2:90015139-90015158 | Msa0436440:intron | 55.0% | |
| ! | TCGTGTATGATGGGGGCATG+TGG | + | chr3_2:90016238-90016257 | Msa0436440:three_prime_UTR | 55.0% |
| ACGGATACGGACACGGACAC+CGG | + | chr3_2:90011048-90011067 | Msa0436440:intron | 60.0% | |
| GTCAGTGTCCGTGTCGTGTC+CGG | - | chr3_2:90011070-90011089 | None:intergenic | 60.0% | |
| !! | TGTCGGTGTCGTGTCGGTGT+CGG | + | chr3_2:90011144-90011163 | Msa0436440:intron | 60.0% |
| ACACGACACGTGTCCGACAC+CGG | + | chr3_2:90011167-90011186 | Msa0436440:intron | 60.0% | |
| GATTAGGCGTGTCCCGGTGT+CGG | - | chr3_2:90011183-90011202 | None:intergenic | 60.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | - | chr3_2:90011189-90011208 | None:intergenic | 60.0% |
| GCACGGACACTCCTCGGATT+AGG | - | chr3_2:90011199-90011218 | None:intergenic | 60.0% | |
| GAGGGAAAGAGGGAAGGGCA+GGG | - | chr3_2:90012261-90012280 | None:intergenic | 60.0% | |
| AGAGGGAAAGAGGGAAGGGC+AGG | - | chr3_2:90012262-90012281 | None:intergenic | 60.0% | |
| TGTGCTGGATGCAGCTGCAC+AGG | + | chr3_2:90012450-90012469 | Msa0436440:CDS | 60.0% | |
| TTGTGATGCTTGGGCGCAGG+TGG | - | chr3_2:90012538-90012557 | None:intergenic | 60.0% | |
| GTGTTGTGATGCTTGGGCGC+AGG | - | chr3_2:90012541-90012560 | None:intergenic | 60.0% | |
| GCTTCCATAGTCGACCTCCC+AGG | - | chr3_2:90013612-90013631 | None:intergenic | 60.0% | |
| GCTCCATCACGCGTCGAAGT+AGG | - | chr3_2:90013641-90013660 | None:intergenic | 60.0% | |
| AGGGGGCTTCGACTAGTGTG+AGG | + | chr3_2:90013808-90013827 | Msa0436440:intron | 60.0% | |
| AGGACGCAGGATGGGGATAC+CGG | + | chr3_2:90013828-90013847 | Msa0436440:intron | 60.0% | |
| ! | CTTGCTTGGTGAGTCGAGGG+AGG | + | chr3_2:90013986-90014005 | Msa0436440:intron | 60.0% |
| CGAGGGAGGAGTTAAACGGG+AGG | + | chr3_2:90014000-90014019 | Msa0436440:intron | 60.0% | |
| ACGGGAGGCTAGAGACTTGG+AGG | + | chr3_2:90014015-90014034 | Msa0436440:intron | 60.0% | |
| GATAGCTGGGGAGGGACTTC+AGG | + | chr3_2:90015138-90015157 | Msa0436440:intron | 60.0% | |
| CACGGACACCGGACACGACA+CGG | + | chr3_2:90011059-90011078 | Msa0436440:intron | 65.0% | |
| CACGACACGTGTCCGACACC+GGG | + | chr3_2:90011168-90011187 | Msa0436440:intron | 65.0% | |
| ACCGGGACACGCCTAATCCG+AGG | + | chr3_2:90011185-90011204 | Msa0436440:intron | 65.0% | |
| ! | TCGCCGGATTCAGGAGCACG+AGG | + | chr3_2:90013263-90013282 | Msa0436440:intron | 65.0% |
| GGGGAGGGACTTCAGGGCTA+AGG | + | chr3_2:90015145-90015164 | Msa0436440:intron | 65.0% | |
| GAGAAGGCCCGTAGACGCCG+TGG | + | chr3_2:90014547-90014566 | Msa0436440:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 90010480 | 90016367 | 90010480 | ID=Msa0436440;Name=Msa0436440 |
| chr3_2 | mRNA | 90010480 | 90016367 | 90010480 | ID=Msa0436440-mRNA-1;Parent=Msa0436440;Name=Msa0436440-mRNA-1;_AED=0.12;_eAED=0.12;_QI=63|1|1|1|0.6|0.5|6|240|240 |
| chr3_2 | exon | 90010480 | 90010644 | 90010480 | ID=Msa0436440-mRNA-1:exon:26759;Parent=Msa0436440-mRNA-1 |
| chr3_2 | exon | 90010762 | 90010862 | 90010762 | ID=Msa0436440-mRNA-1:exon:26760;Parent=Msa0436440-mRNA-1 |
| chr3_2 | exon | 90011731 | 90011917 | 90011731 | ID=Msa0436440-mRNA-1:exon:26761;Parent=Msa0436440-mRNA-1 |
| chr3_2 | exon | 90012379 | 90012575 | 90012379 | ID=Msa0436440-mRNA-1:exon:26762;Parent=Msa0436440-mRNA-1 |
| chr3_2 | exon | 90014779 | 90014878 | 90014779 | ID=Msa0436440-mRNA-1:exon:26763;Parent=Msa0436440-mRNA-1 |
| chr3_2 | exon | 90016092 | 90016367 | 90016092 | ID=Msa0436440-mRNA-1:exon:26764;Parent=Msa0436440-mRNA-1 |
| chr3_2 | five_prime_UTR | 90010480 | 90010542 | 90010480 | ID=Msa0436440-mRNA-1:five_prime_utr;Parent=Msa0436440-mRNA-1 |
| chr3_2 | CDS | 90010543 | 90010644 | 90010543 | ID=Msa0436440-mRNA-1:cds;Parent=Msa0436440-mRNA-1 |
| chr3_2 | CDS | 90010762 | 90010862 | 90010762 | ID=Msa0436440-mRNA-1:cds;Parent=Msa0436440-mRNA-1 |
| chr3_2 | CDS | 90011731 | 90011917 | 90011731 | ID=Msa0436440-mRNA-1:cds;Parent=Msa0436440-mRNA-1 |
| chr3_2 | CDS | 90012379 | 90012575 | 90012379 | ID=Msa0436440-mRNA-1:cds;Parent=Msa0436440-mRNA-1 |
| chr3_2 | CDS | 90014779 | 90014878 | 90014779 | ID=Msa0436440-mRNA-1:cds;Parent=Msa0436440-mRNA-1 |
| chr3_2 | CDS | 90016092 | 90016127 | 90016092 | ID=Msa0436440-mRNA-1:cds;Parent=Msa0436440-mRNA-1 |
| chr3_2 | three_prime_UTR | 90016128 | 90016367 | 90016128 | ID=Msa0436440-mRNA-1:three_prime_utr;Parent=Msa0436440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
