Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0572360 | XP_013447151.1 | 95.816 | 239 | 10 | 0 | 1 | 239 | 1 | 239 | 4.30e-164 | 463 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0572360 | sp|Q9SWE7|VATE_CITLI | 77.824 | 239 | 43 | 1 | 1 | 239 | 1 | 229 | 1.93e-130 | 370 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0572360 | A0A072TWB9 | 95.816 | 239 | 10 | 0 | 1 | 239 | 1 | 239 | 2.06e-164 | 463 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004590 | Msa0572360 | 0.803929 | 2.756493e-49 | -8.615850e-47 |
Msa0006840 | Msa0572360 | 0.827582 | 1.444760e-54 | -8.615850e-47 |
Msa0010210 | Msa0572360 | 0.801144 | 1.034370e-48 | -8.615850e-47 |
Msa0030070 | Msa0572360 | 0.803846 | 2.868971e-49 | -8.615850e-47 |
Msa0034100 | Msa0572360 | -0.816080 | 6.648378e-52 | -8.615850e-47 |
Msa0037660 | Msa0572360 | 0.823938 | 1.057966e-53 | -8.615850e-47 |
Msa0039750 | Msa0572360 | 0.839908 | 1.196077e-57 | -8.615850e-47 |
Msa0041910 | Msa0572360 | 0.817469 | 3.244176e-52 | -8.615850e-47 |
Msa0044440 | Msa0572360 | 0.820771 | 5.751055e-53 | -8.615850e-47 |
Msa0044530 | Msa0572360 | -0.802498 | 5.453018e-49 | -8.615850e-47 |
Msa0045620 | Msa0572360 | 0.864766 | 9.602304e-65 | -8.615850e-47 |
Msa0050530 | Msa0572360 | 0.840067 | 1.087101e-57 | -8.615850e-47 |
Msa0057860 | Msa0572360 | 0.815507 | 8.923680e-52 | -8.615850e-47 |
Msa0063190 | Msa0572360 | 0.825241 | 5.218258e-54 | -8.615850e-47 |
Msa0075840 | Msa0572360 | 0.810881 | 9.245482e-51 | -8.615850e-47 |
Msa0081290 | Msa0572360 | -0.807097 | 5.968906e-50 | -8.615850e-47 |
Msa0089540 | Msa0572360 | 0.847923 | 8.505893e-60 | -8.615850e-47 |
Msa0092350 | Msa0572360 | 0.800765 | 1.236085e-48 | -8.615850e-47 |
Msa0094560 | Msa0572360 | 0.801359 | 9.347099e-49 | -8.615850e-47 |
Msa0100600 | Msa0572360 | 0.834079 | 3.688033e-56 | -8.615850e-47 |
Msa0100890 | Msa0572360 | 0.851965 | 6.292859e-61 | -8.615850e-47 |
Msa0102920 | Msa0572360 | 0.802677 | 5.009280e-49 | -8.615850e-47 |
Msa0121320 | Msa0572360 | 0.831966 | 1.236818e-55 | -8.615850e-47 |
Msa0125590 | Msa0572360 | 0.805963 | 1.035713e-49 | -8.615850e-47 |
Msa0128110 | Msa0572360 | -0.808716 | 2.701162e-50 | -8.615850e-47 |
Msa0128340 | Msa0572360 | 0.813416 | 2.588131e-51 | -8.615850e-47 |
Msa0128740 | Msa0572360 | 0.802050 | 6.741842e-49 | -8.615850e-47 |
Msa0135230 | Msa0572360 | 0.810240 | 1.271944e-50 | -8.615850e-47 |
Msa0136180 | Msa0572360 | -0.808856 | 2.521187e-50 | -8.615850e-47 |
Msa0136330 | Msa0572360 | 0.825551 | 4.408492e-54 | -8.615850e-47 |
Msa0147680 | Msa0572360 | 0.826205 | 3.082456e-54 | -8.615850e-47 |
Msa0164170 | Msa0572360 | 0.819368 | 1.205164e-52 | -8.615850e-47 |
Msa0166180 | Msa0572360 | 0.830663 | 2.586631e-55 | -8.615850e-47 |
Msa0168380 | Msa0572360 | 0.843903 | 1.052560e-58 | -8.615850e-47 |
Msa0173600 | Msa0572360 | -0.804028 | 2.628764e-49 | -8.615850e-47 |
Msa0179040 | Msa0572360 | 0.817049 | 4.034413e-52 | -8.615850e-47 |
Msa0183310 | Msa0572360 | -0.819910 | 9.061898e-53 | -8.615850e-47 |
Msa0192050 | Msa0572360 | 0.815555 | 8.705078e-52 | -8.615850e-47 |
Msa0206370 | Msa0572360 | 0.804198 | 2.423588e-49 | -8.615850e-47 |
Msa0211460 | Msa0572360 | 0.807459 | 5.002081e-50 | -8.615850e-47 |
Msa0219840 | Msa0572360 | 0.810813 | 9.564358e-51 | -8.615850e-47 |
Msa0221460 | Msa0572360 | -0.827663 | 1.381798e-54 | -8.615850e-47 |
Msa0235080 | Msa0572360 | 0.802798 | 4.729237e-49 | -8.615850e-47 |
Msa0372100 | Msa0572360 | 0.813564 | 2.401197e-51 | -8.615850e-47 |
Msa0380590 | Msa0572360 | 0.803631 | 3.179151e-49 | -8.615850e-47 |
Msa0384590 | Msa0572360 | 0.839211 | 1.814250e-57 | -8.615850e-47 |
Msa0388250 | Msa0572360 | 0.822270 | 2.592022e-53 | -8.615850e-47 |
Msa0416210 | Msa0572360 | 0.849375 | 3.366653e-60 | -8.615850e-47 |
Msa0418100 | Msa0572360 | 0.807004 | 6.246777e-50 | -8.615850e-47 |
Msa0419420 | Msa0572360 | -0.809949 | 1.469049e-50 | -8.615850e-47 |
Msa0421220 | Msa0572360 | -0.802934 | 4.431307e-49 | -8.615850e-47 |
Msa0432200 | Msa0572360 | 0.829762 | 4.294133e-55 | -8.615850e-47 |
Msa0433630 | Msa0572360 | 0.834138 | 3.564072e-56 | -8.615850e-47 |
Msa0434660 | Msa0572360 | 0.834164 | 3.511364e-56 | -8.615850e-47 |
Msa0436440 | Msa0572360 | 0.955406 | 3.264091e-113 | -8.615850e-47 |
Msa0238960 | Msa0572360 | -0.801519 | 8.667710e-49 | -8.615850e-47 |
Msa0240590 | Msa0572360 | -0.817956 | 2.519384e-52 | -8.615850e-47 |
Msa0244820 | Msa0572360 | -0.828571 | 8.347197e-55 | -8.615850e-47 |
Msa0260980 | Msa0572360 | 0.824908 | 6.254681e-54 | -8.615850e-47 |
Msa0267450 | Msa0572360 | -0.823275 | 1.511855e-53 | -8.615850e-47 |
Msa0267510 | Msa0572360 | -0.822084 | 2.861939e-53 | -8.615850e-47 |
Msa0267710 | Msa0572360 | 0.804286 | 2.323717e-49 | -8.615850e-47 |
Msa0269220 | Msa0572360 | -0.802907 | 4.490222e-49 | -8.615850e-47 |
Msa0272790 | Msa0572360 | 0.807174 | 5.749011e-50 | -8.615850e-47 |
Msa0276800 | Msa0572360 | -0.850947 | 1.220918e-60 | -8.615850e-47 |
Msa0279090 | Msa0572360 | -0.810838 | 9.445632e-51 | -8.615850e-47 |
Msa0300670 | Msa0572360 | -0.831367 | 1.737382e-55 | -8.615850e-47 |
Msa0307430 | Msa0572360 | 0.838060 | 3.598135e-57 | -8.615850e-47 |
Msa0316720 | Msa0572360 | -0.844546 | 7.070649e-59 | -8.615850e-47 |
Msa0336460 | Msa0572360 | 0.807879 | 4.073745e-50 | -8.615850e-47 |
Msa0336520 | Msa0572360 | 0.817450 | 3.276869e-52 | -8.615850e-47 |
Msa0337760 | Msa0572360 | -0.827230 | 1.754881e-54 | -8.615850e-47 |
Msa0354970 | Msa0572360 | -0.800037 | 1.738876e-48 | -8.615850e-47 |
Msa0356640 | Msa0572360 | 0.837180 | 6.052818e-57 | -8.615850e-47 |
Msa0495620 | Msa0572360 | 0.831371 | 1.733475e-55 | -8.615850e-47 |
Msa0500420 | Msa0572360 | 0.802086 | 6.627160e-49 | -8.615850e-47 |
Msa0513580 | Msa0572360 | -0.803810 | 2.918215e-49 | -8.615850e-47 |
Msa0521060 | Msa0572360 | 0.832567 | 8.780180e-56 | -8.615850e-47 |
Msa0521510 | Msa0572360 | 0.841876 | 3.642652e-58 | -8.615850e-47 |
Msa0521530 | Msa0572360 | 0.805934 | 1.050050e-49 | -8.615850e-47 |
Msa0522540 | Msa0572360 | 0.840828 | 6.871262e-58 | -8.615850e-47 |
Msa0526150 | Msa0572360 | 0.949663 | 8.062671e-108 | -8.615850e-47 |
Msa0526500 | Msa0572360 | -0.803416 | 3.521994e-49 | -8.615850e-47 |
Msa0528310 | Msa0572360 | 0.805432 | 1.338441e-49 | -8.615850e-47 |
Msa0530660 | Msa0572360 | 0.801641 | 8.180038e-49 | -8.615850e-47 |
Msa0541880 | Msa0572360 | 0.840305 | 9.418431e-58 | -8.615850e-47 |
Msa0541940 | Msa0572360 | 0.847913 | 8.559121e-60 | -8.615850e-47 |
Msa0549870 | Msa0572360 | 0.813961 | 1.963918e-51 | -8.615850e-47 |
Msa0566460 | Msa0572360 | 0.817596 | 3.038333e-52 | -8.615850e-47 |
Msa0567330 | Msa0572360 | 0.820871 | 5.453597e-53 | -8.615850e-47 |
Msa0567570 | Msa0572360 | 0.810287 | 1.242367e-50 | -8.615850e-47 |
Msa0568290 | Msa0572360 | -0.842342 | 2.742551e-58 | -8.615850e-47 |
Msa0568460 | Msa0572360 | -0.830049 | 3.655263e-55 | -8.615850e-47 |
Msa0571350 | Msa0572360 | 0.823817 | 1.129458e-53 | -8.615850e-47 |
Msa0572360 | Msa0575950 | 0.825327 | 4.980984e-54 | -8.615850e-47 |
Msa0572360 | Msa0576320 | 0.826283 | 2.952697e-54 | -8.615850e-47 |
Msa0572360 | Msa0579080 | 0.809342 | 1.984027e-50 | -8.615850e-47 |
Msa0572360 | Msa0582460 | 0.809242 | 2.084009e-50 | -8.615850e-47 |
Msa0572360 | Msa0587180 | 0.814686 | 1.357442e-51 | -8.615850e-47 |
Msa0572360 | Msa0591890 | 0.806653 | 7.409656e-50 | -8.615850e-47 |
Msa0572360 | Msa0605350 | 0.803684 | 3.099515e-49 | -8.615850e-47 |
Msa0572360 | Msa0612880 | -0.800920 | 1.149408e-48 | -8.615850e-47 |
Msa0572360 | Msa0618840 | 0.805197 | 1.499516e-49 | -8.615850e-47 |
Msa0572360 | Msa0618990 | 0.828140 | 1.060995e-54 | -8.615850e-47 |
Msa0572360 | Msa0623310 | 0.859943 | 2.915416e-63 | -8.615850e-47 |
Msa0572360 | Msa0626980 | 0.802339 | 5.879478e-49 | -8.615850e-47 |
Msa0572360 | Msa0627360 | 0.801245 | 9.859543e-49 | -8.615850e-47 |
Msa0572360 | Msa0630440 | 0.830431 | 2.948113e-55 | -8.615850e-47 |
Msa0572360 | Msa0631900 | 0.805371 | 1.378721e-49 | -8.615850e-47 |
Msa0572360 | Msa0646260 | 0.814432 | 1.545276e-51 | -8.615850e-47 |
Msa0572360 | Msa0658120 | 0.806819 | 6.835364e-50 | -8.615850e-47 |
Msa0572360 | Msa0659020 | -0.832059 | 1.173223e-55 | -8.615850e-47 |
Msa0572360 | Msa0660260 | 0.816652 | 4.952458e-52 | -8.615850e-47 |
Msa0572360 | Msa0663290 | 0.807948 | 3.938555e-50 | -8.615850e-47 |
Msa0572360 | Msa0664070 | 0.813315 | 2.723741e-51 | -8.615850e-47 |
Msa0572360 | Msa0673940 | 0.824717 | 6.938670e-54 | -8.615850e-47 |
Msa0572360 | Msa0680370 | 0.823909 | 1.074676e-53 | -8.615850e-47 |
Msa0572360 | Msa0680450 | 0.825536 | 4.442432e-54 | -8.615850e-47 |
Msa0572360 | Msa0685390 | -0.815941 | 7.140106e-52 | -8.615850e-47 |
Msa0572360 | Msa0685610 | 0.855289 | 6.970121e-62 | -8.615850e-47 |
Msa0572360 | Msa0689830 | 0.816301 | 5.933760e-52 | -8.615850e-47 |
Msa0572360 | Msa0702970 | 0.803327 | 3.675947e-49 | -8.615850e-47 |
Msa0572360 | Msa0704690 | 0.838421 | 2.904756e-57 | -8.615850e-47 |
Msa0572360 | Msa0704780 | -0.801898 | 7.243848e-49 | -8.615850e-47 |
Msa0572360 | Msa0705180 | 0.801524 | 8.646779e-49 | -8.615850e-47 |
Msa0572360 | Msa0707260 | 0.806788 | 6.939506e-50 | -8.615850e-47 |
Msa0572360 | Msa0707360 | 0.812799 | 3.533868e-51 | -8.615850e-47 |
Msa0572360 | Msa0708020 | 0.807313 | 5.371594e-50 | -8.615850e-47 |
Msa0572360 | Msa0708980 | 0.820516 | 6.583436e-53 | -8.615850e-47 |
Msa0572360 | Msa0732970 | 0.800326 | 1.518761e-48 | -8.615850e-47 |
Msa0572360 | Msa0733240 | -0.820662 | 6.093108e-53 | -8.615850e-47 |
Msa0572360 | Msa0751720 | 0.802573 | 5.262630e-49 | -8.615850e-47 |
Msa0572360 | Msa0756670 | -0.808861 | 2.514928e-50 | -8.615850e-47 |
Msa0572360 | Msa0761830 | 0.840629 | 7.747893e-58 | -8.615850e-47 |
Msa0572360 | Msa0767280 | 0.800485 | 1.409636e-48 | -8.615850e-47 |
Msa0572360 | Msa0771910 | 0.822337 | 2.499944e-53 | -8.615850e-47 |
Msa0572360 | Msa0774360 | -0.823962 | 1.044357e-53 | -8.615850e-47 |
Msa0572360 | Msa0797980 | -0.802479 | 5.502223e-49 | -8.615850e-47 |
Msa0572360 | Msa0804170 | 0.808408 | 3.143381e-50 | -8.615850e-47 |
Msa0572360 | Msa0810080 | 0.806990 | 6.288704e-50 | -8.615850e-47 |
Msa0572360 | Msa0812020 | -0.835702 | 1.438954e-56 | -8.615850e-47 |
Msa0572360 | Msa0831820 | 0.828964 | 6.708516e-55 | -8.615850e-47 |
Msa0572360 | Msa0836060 | -0.805611 | 1.227997e-49 | -8.615850e-47 |
Msa0572360 | Msa0842180 | 0.811109 | 8.250047e-51 | -8.615850e-47 |
Msa0572360 | Msa0846900 | 0.845409 | 4.134925e-59 | -8.615850e-47 |
Msa0572360 | Msa0847140 | 0.802746 | 4.845823e-49 | -8.615850e-47 |
Msa0572360 | Msa0848670 | -0.801019 | 1.096932e-48 | -8.615850e-47 |
Msa0572360 | Msa0850600 | 0.813708 | 2.231897e-51 | -8.615850e-47 |
Msa0572360 | Msa0852090 | -0.834276 | 3.291460e-56 | -8.615850e-47 |
Msa0572360 | Msa0870020 | 0.848198 | 7.142947e-60 | -8.615850e-47 |
Msa0572360 | Msa0871420 | 0.808649 | 2.791835e-50 | -8.615850e-47 |
Msa0572360 | Msa0876630 | 0.816624 | 5.024668e-52 | -8.615850e-47 |
Msa0572360 | Msa0902270 | 0.803016 | 4.262814e-49 | -8.615850e-47 |
Msa0572360 | Msa0921860 | 0.815511 | 8.904389e-52 | -8.615850e-47 |
Msa0572360 | Msa0931370 | 0.811981 | 5.333293e-51 | -8.615850e-47 |
Msa0572360 | Msa0936630 | 0.802041 | 6.770258e-49 | -8.615850e-47 |
Msa0572360 | Msa0970040 | 0.836615 | 8.433322e-57 | -8.615850e-47 |
Msa0572360 | Msa0970100 | 0.843620 | 1.252878e-58 | -8.615850e-47 |
Msa0572360 | Msa0978980 | 0.821368 | 4.190692e-53 | -8.615850e-47 |
Msa0572360 | Msa0987670 | 0.805876 | 1.080393e-49 | -8.615850e-47 |
Msa0572360 | Msa1021560 | 0.822130 | 2.793046e-53 | -8.615850e-47 |
Msa0572360 | Msa1025200 | 0.800697 | 1.276103e-48 | -8.615850e-47 |
Msa0572360 | Msa1025220 | 0.807525 | 4.844226e-50 | -8.615850e-47 |
Msa0572360 | Msa1026710 | 0.845495 | 3.919465e-59 | -8.615850e-47 |
Msa0572360 | Msa1033430 | 0.812393 | 4.335502e-51 | -8.615850e-47 |
Msa0572360 | Msa1038860 | 0.859251 | 4.707542e-63 | -8.615850e-47 |
Msa0572360 | Msa1039440 | -0.804644 | 1.956477e-49 | -8.615850e-47 |
Msa0572360 | Msa1041060 | 0.810159 | 1.324241e-50 | -8.615850e-47 |
Msa0572360 | Msa1057620 | -0.815713 | 8.028577e-52 | -8.615850e-47 |
Msa0572360 | Msa1070630 | -0.803603 | 3.221973e-49 | -8.615850e-47 |
Msa0572360 | Msa1073050 | 0.809676 | 1.682476e-50 | -8.615850e-47 |
Msa0572360 | Msa1081270 | 0.802235 | 6.176497e-49 | -8.615850e-47 |
Msa0572360 | Msa1085560 | 0.805917 | 1.059200e-49 | -8.615850e-47 |
Msa0572360 | Msa1085680 | 0.805589 | 1.241257e-49 | -8.615850e-47 |
Msa0572360 | Msa1088740 | -0.814611 | 1.410305e-51 | -8.615850e-47 |
Msa0572360 | Msa1093190 | -0.806823 | 6.821262e-50 | -8.615850e-47 |
Msa0572360 | Msa1107330 | 0.800726 | 1.258966e-48 | -8.615850e-47 |
Msa0572360 | Msa1124210 | 0.810075 | 1.380256e-50 | -8.615850e-47 |
Msa0572360 | Msa1127200 | 0.819288 | 1.256685e-52 | -8.615850e-47 |
Msa0572360 | Msa1129660 | -0.810293 | 1.238480e-50 | -8.615850e-47 |
Msa0572360 | Msa1130770 | 0.842457 | 2.555931e-58 | -8.615850e-47 |
Msa0572360 | Msa1134740 | 0.816416 | 5.592855e-52 | -8.615850e-47 |
Msa0572360 | Msa1144990 | 0.820042 | 8.454050e-53 | -8.615850e-47 |
Msa0572360 | Msa1146980 | 0.809463 | 1.868763e-50 | -8.615850e-47 |
Msa0572360 | Msa1148930 | 0.818720 | 1.691296e-52 | -8.615850e-47 |
Msa0572360 | Msa1150860 | 0.808294 | 3.324476e-50 | -8.615850e-47 |
Msa0572360 | Msa1154630 | 0.828027 | 1.129116e-54 | -8.615850e-47 |
Msa0572360 | Msa1158450 | -0.803430 | 3.499162e-49 | -8.615850e-47 |
Msa0572360 | Msa1162360 | 0.816649 | 4.959453e-52 | -8.615850e-47 |
Msa0572360 | Msa1165460 | 0.815018 | 1.145870e-51 | -8.615850e-47 |
Msa0572360 | Msa1183900 | 0.813429 | 2.570749e-51 | -8.615850e-47 |
Msa0572360 | Msa1186670 | 0.811499 | 6.792152e-51 | -8.615850e-47 |
Msa0572360 | Msa1190350 | -0.818598 | 1.803427e-52 | -8.615850e-47 |
Msa0572360 | Msa1190560 | 0.851788 | 7.065287e-61 | -8.615850e-47 |
Msa0572360 | Msa1190770 | 0.804663 | 1.939114e-49 | -8.615850e-47 |
Msa0572360 | Msa1197720 | 0.817279 | 3.581562e-52 | -8.615850e-47 |
Msa0572360 | Msa1200360 | 0.801182 | 1.016002e-48 | -8.615850e-47 |
Msa0572360 | Msa1205270 | -0.806550 | 7.791808e-50 | -8.615850e-47 |
Msa0572360 | Msa1220580 | 0.843692 | 1.198596e-58 | -8.615850e-47 |
Msa0572360 | Msa1220720 | 0.823095 | 1.665605e-53 | -8.615850e-47 |
Msa0572360 | Msa1243630 | -0.810865 | 9.319103e-51 | -8.615850e-47 |
Msa0572360 | Msa1244220 | -0.808021 | 3.800447e-50 | -8.615850e-47 |
Msa0572360 | Msa1253270 | 0.803264 | 3.788023e-49 | -8.615850e-47 |
Msa0572360 | Msa1260520 | -0.800118 | 1.674368e-48 | -8.615850e-47 |
Msa0572360 | Msa1265570 | 0.824159 | 9.387206e-54 | -8.615850e-47 |
Msa0572360 | Msa1266120 | -0.821627 | 3.650831e-53 | -8.615850e-47 |
Msa0572360 | Msa1273320 | 0.804590 | 2.008326e-49 | -8.615850e-47 |
Msa0572360 | Msa1278030 | 0.800203 | 1.609091e-48 | -8.615850e-47 |
Msa0572360 | Msa1282300 | 0.809091 | 2.245359e-50 | -8.615850e-47 |
Msa0572360 | Msa1286860 | -0.800121 | 1.672394e-48 | -8.615850e-47 |
Msa0572360 | Msa1294280 | 0.802940 | 4.420508e-49 | -8.615850e-47 |
Msa0572360 | Msa1295210 | -0.804041 | 2.612612e-49 | -8.615850e-47 |
Msa0572360 | Msa1297220 | -0.814229 | 1.713379e-51 | -8.615850e-47 |
Msa0572360 | Msa1308860 | 0.817590 | 3.046829e-52 | -8.615850e-47 |
Msa0572360 | Msa1323260 | -0.818902 | 1.538349e-52 | -8.615850e-47 |
Msa0572360 | Msa1334560 | 0.846025 | 2.814271e-59 | -8.615850e-47 |
Msa0572360 | Msa1334670 | 0.825444 | 4.672269e-54 | -8.615850e-47 |
Msa0572360 | Msa1342560 | 0.831637 | 1.491101e-55 | -8.615850e-47 |
Msa0572360 | Msa1343450 | -0.823656 | 1.231418e-53 | -8.615850e-47 |
Msa0572360 | Msa1347610 | 0.821584 | 3.735140e-53 | -8.615850e-47 |
Msa0572360 | Msa1352580 | 0.871803 | 5.173218e-67 | -8.615850e-47 |
Msa0572360 | Msa1352600 | -0.811758 | 5.963311e-51 | -8.615850e-47 |
Msa0572360 | Msa1352630 | -0.808869 | 2.505567e-50 | -8.615850e-47 |
Msa0572360 | Msa1356450 | 0.815570 | 8.637762e-52 | -8.615850e-47 |
Msa0572360 | Msa1362590 | 0.805166 | 1.522366e-49 | -8.615850e-47 |
Msa0572360 | Msa1363280 | -0.804875 | 1.750867e-49 | -8.615850e-47 |
Msa0572360 | Msa1365230 | 0.825760 | 3.932618e-54 | -8.615850e-47 |
Msa0572360 | Msa1366140 | -0.804134 | 2.498640e-49 | -8.615850e-47 |
Msa0572360 | Msa1371800 | 0.867683 | 1.142520e-65 | -8.615850e-47 |
Msa0572360 | Msa1372030 | 0.824012 | 1.016459e-53 | -8.615850e-47 |
Msa0572360 | Msa1376310 | 0.862246 | 5.806840e-64 | -8.615850e-47 |
Msa0572360 | Msa1379940 | 0.957001 | 7.760202e-115 | -8.615850e-47 |
Msa0572360 | Msa1385570 | 0.806801 | 6.896249e-50 | -8.615850e-47 |
Msa0572360 | Msa1395050 | 0.801164 | 1.024546e-48 | -8.615850e-47 |
Msa0572360 | Msa1398460 | 0.809432 | 1.898126e-50 | -8.615850e-47 |
Msa0572360 | Msa1400290 | -0.806328 | 8.679013e-50 | -8.615850e-47 |
Msa0572360 | Msa1401000 | -0.804025 | 2.633533e-49 | -8.615850e-47 |
Msa0572360 | Msa1407810 | 0.817370 | 3.416184e-52 | -8.615850e-47 |
Msa0572360 | Msa1412740 | -0.805786 | 1.128158e-49 | -8.615850e-47 |
Msa0572360 | Msa1413020 | 0.811334 | 7.374058e-51 | -8.615850e-47 |
Msa0572360 | Msa1420830 | 0.858937 | 5.844033e-63 | -8.615850e-47 |
Msa0572360 | Msa1427600 | -0.804955 | 1.685145e-49 | -8.615850e-47 |
Msa0572360 | Msa1428230 | -0.810439 | 1.152319e-50 | -8.615850e-47 |
Msa0572360 | Msa1429810 | 0.802577 | 5.252611e-49 | -8.615850e-47 |
Msa0572360 | Msa1433360 | 0.802193 | 6.301879e-49 | -8.615850e-47 |
Msa0572360 | Msa1434700 | 0.806807 | 6.874644e-50 | -8.615850e-47 |
Msa0572360 | Msa1437780 | 0.816982 | 4.174905e-52 | -8.615850e-47 |
Msa0572360 | Msa1438510 | 0.813619 | 2.335068e-51 | -8.615850e-47 |
Msa0572360 | Msa1447900 | 0.824883 | 6.341751e-54 | -8.615850e-47 |
Msa0572360 | Msa1450290 | 0.825820 | 3.805745e-54 | -8.615850e-47 |
Msa0572360 | Msa1450630 | -0.806157 | 9.426524e-50 | -8.615850e-47 |
Msa0572360 | Msa1456040 | 0.819801 | 9.597798e-53 | -8.615850e-47 |
Msa0572360 | Msa1461260 | 0.819633 | 1.048240e-52 | -8.615850e-47 |
Msa0572360 | Msa1462780 | 0.830141 | 3.470913e-55 | -8.615850e-47 |
Msa0572360 | Msa1463430 | 0.822089 | 2.853819e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0572360 | MtrunA17_Chr8g0387781 | 95.816 | 239 | 10 | 0 | 1 | 239 | 1 | 239 | 3.96e-168 | 463 |
Msa0572360 | MtrunA17_Chr5g0396971 | 78.333 | 240 | 42 | 1 | 1 | 240 | 1 | 230 | 2.02e-133 | 375 |
Msa0572360 | MtrunA17_Chr4g0037391 | 68.398 | 231 | 61 | 2 | 1 | 229 | 1 | 221 | 1.10e-108 | 313 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0572360 | AT4G11150.1 | 72.996 | 237 | 54 | 1 | 1 | 237 | 1 | 227 | 1.08e-121 | 345 |
Msa0572360 | AT1G64200.1 | 71.130 | 239 | 65 | 1 | 1 | 239 | 1 | 235 | 1.16e-119 | 340 |
Msa0572360 | AT1G64200.2 | 70.996 | 231 | 63 | 1 | 1 | 231 | 1 | 227 | 3.95e-115 | 329 |
Msa0572360 | AT3G08560.1 | 63.445 | 238 | 75 | 2 | 1 | 236 | 1 | 228 | 3.18e-101 | 294 |
Msa0572360 | AT1G64200.3 | 69.792 | 192 | 54 | 1 | 1 | 192 | 1 | 188 | 4.20e-90 | 264 |
Find 53 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATATAAGTTTCACCTTGA+TGG | 0.295071 | 4_1:-75279330 | Msa0572360:three_prime_UTR |
TCTAAAAGATCTCATTGTTC+AGG | 0.350211 | 4_1:-75281923 | Msa0572360:intron |
CATCAAGGTGAAACTTATAT+TGG | 0.372050 | 4_1:+75279331 | None:intergenic |
CAGATCCGAAAGCAGCTCTT+TGG | 0.391740 | 4_1:-75279515 | Msa0572360:CDS |
CAGCTCTGGTGGGGTGGTGT+TGG | 0.395029 | 4_1:-75280829 | Msa0572360:CDS |
CAATGCAGCTGAATGCTTCT+CGG | 0.400725 | 4_1:-75282080 | Msa0572360:CDS |
TAGTTGCAAATAATATATAT+TGG | 0.403454 | 4_1:-75279294 | Msa0572360:three_prime_UTR |
TCGATTACATTTGTTGCCCC+TGG | 0.437470 | 4_1:-75279471 | Msa0572360:three_prime_UTR |
ACATTGAGGATATGTATTCC+AGG | 0.438542 | 4_1:+75279453 | None:intergenic |
GGCGGATAAATCTCACCATC+TGG | 0.473875 | 4_1:+75283155 | None:intergenic |
TGTTCTCATATCGTGTATGA+TGG | 0.484068 | 4_1:-75279376 | Msa0572360:three_prime_UTR |
ATACACGATATGAGAACAAC+AGG | 0.485177 | 4_1:+75279381 | None:intergenic |
GCTCACATTCAAAAGTTCCT+TGG | 0.486133 | 4_1:+75282002 | None:intergenic |
CTTGTCCAAAGAGCTGCTTT+CGG | 0.496240 | 4_1:+75279510 | None:intergenic |
GTGGTGTTGGCTTCTCGTGA+TGG | 0.512785 | 4_1:-75280816 | Msa0572360:CDS |
ACAAAACTCACGAACCCTAC+TGG | 0.514001 | 4_1:-75281252 | Msa0572360:intron |
CAGGAAAACAAGTTCGTCAA+TGG | 0.514811 | 4_1:+75283226 | None:intergenic |
AATGAAAGAAGTTGCAGCCA+AGG | 0.517165 | 4_1:-75282019 | Msa0572360:CDS |
AAATACTCTTGATGCACGGC+TGG | 0.517377 | 4_1:-75280778 | Msa0572360:CDS |
CAATATCGAGAAGCTTCAGT+TGG | 0.524663 | 4_1:-75282963 | Msa0572360:CDS |
TGGAAAATTCAGCTCTGGTG+GGG | 0.526027 | 4_1:-75280838 | Msa0572360:intron |
CTTCTGTCTTGTTGAGATGT+CGG | 0.530658 | 4_1:-75281405 | Msa0572360:CDS |
TGTGGAAAATTCAGCTCTGG+TGG | 0.539041 | 4_1:-75280840 | Msa0572360:intron |
TTCTCATATCGTGTATGATG+GGG | 0.542615 | 4_1:-75279374 | Msa0572360:three_prime_UTR |
TTGTGGTCAACAATGATCTC+TGG | 0.546406 | 4_1:+75281304 | None:intergenic |
GAACATGAACTTTACCAGTA+GGG | 0.549069 | 4_1:+75281238 | None:intergenic |
TTACATAAGCAATGACATTG+AGG | 0.549681 | 4_1:+75279439 | None:intergenic |
AAAATTCAGCTCTGGTGGGG+TGG | 0.550856 | 4_1:-75280835 | Msa0572360:intron |
TATCTTCAACACGGTGATGA+CGG | 0.556951 | 4_1:+75281980 | None:intergenic |
TGTGCTGGATGCAGCTGCAC+AGG | 0.558648 | 4_1:-75281356 | Msa0572360:CDS |
GTTCTCATATCGTGTATGAT+GGG | 0.562196 | 4_1:-75279375 | Msa0572360:three_prime_UTR |
CATTGAGGATATGTATTCCA+GGG | 0.567671 | 4_1:+75279454 | None:intergenic |
GATCTCTCTCTCTGCTGAAG+AGG | 0.568633 | 4_1:-75283107 | Msa0572360:intron |
TCGGAAACATGACGTGCACT+TGG | 0.572529 | 4_1:-75281386 | Msa0572360:CDS |
AACAGTAAACATCACAACAT+TGG | 0.572592 | 4_1:+75279262 | None:intergenic |
ATATATTATTTGCAACTAGT+CGG | 0.582033 | 4_1:+75279299 | None:intergenic |
CGACATCTCAACAAGACAGA+AGG | 0.583156 | 4_1:+75281406 | None:intergenic |
GCACTTGGTAGCACATGTGC+TGG | 0.596057 | 4_1:-75281371 | Msa0572360:CDS |
GTGGAAAATTCAGCTCTGGT+GGG | 0.597030 | 4_1:-75280839 | Msa0572360:intron |
TTGTGATGCTTGGGTGCAGG+TGG | 0.599639 | 4_1:+75281271 | None:intergenic |
CTCTAAGCAAATCCACCAGA+TGG | 0.604393 | 4_1:-75283170 | Msa0572360:CDS |
AGCAGAGAGAGAGATCTCGC+TGG | 0.607582 | 4_1:+75283114 | None:intergenic |
AGTCGGAGAAAACACCATCA+AGG | 0.635390 | 4_1:+75279316 | None:intergenic |
TGGTCAACAATGATCTCTGG+TGG | 0.640783 | 4_1:+75281307 | None:intergenic |
TGAAACATATCAACTTGAGT+CGG | 0.640927 | 4_1:-75283249 | Msa0572360:five_prime_UTR |
AGATCAGACAAGAATATGAG+CGG | 0.642819 | 4_1:-75282922 | Msa0572360:CDS |
TCTCATATCGTGTATGATGG+GGG | 0.650986 | 4_1:-75279373 | Msa0572360:three_prime_UTR |
GGATAAATCTCACCATCTGG+TGG | 0.662922 | 4_1:+75283158 | None:intergenic |
CATGTAAAATATCTTCAACA+CGG | 0.686965 | 4_1:+75281971 | None:intergenic |
GTGAAAATACTCTTGATGCA+CGG | 0.687449 | 4_1:-75280782 | Msa0572360:CDS |
CAGGTGGAAGATAGACATTG+TGG | 0.702848 | 4_1:+75281287 | None:intergenic |
ATTGAGGATATGTATTCCAG+GGG | 0.705670 | 4_1:+75279455 | None:intergenic |
TCTTCTCCGAAAATGAACGA+CGG | 0.753333 | 4_1:-75283199 | Msa0572360:exon |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGATGTTTAATTTTTTTTTT+TGG | - | chr4_1:75279939-75279958 | Msa0572360:intron | 10.0% |
!!! | TTTTTCAAAAAAAAAAAATC+CGG | - | chr4_1:75280169-75280188 | Msa0572360:intron | 10.0% |
!! | ATCTACAAATAATATAAAAT+TGG | + | chr4_1:75280736-75280755 | None:intergenic | 10.0% |
!! | AAGAAACAAAAAAAAAAAAC+AGG | + | chr4_1:75279512-75279531 | None:intergenic | 15.0% |
!! | ATTTCAGATATTGAATATAT+TGG | - | chr4_1:75279785-75279804 | Msa0572360:intron | 15.0% |
!! | TTCAAATGATAATTATATAC+TGG | - | chr4_1:75280881-75280900 | Msa0572360:intron | 15.0% |
!!! | TATTCTTCTGATATTATTTT+AGG | - | chr4_1:75280992-75281011 | Msa0572360:intron | 15.0% |
!! | AGACTTCTATTTAAATATTA+AGG | - | chr4_1:75281293-75281312 | Msa0572360:CDS | 15.0% |
!!! | ATTTTATGTATTTGGTTTAT+TGG | - | chr4_1:75282760-75282779 | Msa0572360:intron | 15.0% |
!! | TAGTTGCAAATAATATATAT+TGG | - | chr4_1:75283213-75283232 | Msa0572360:five_prime_UTR | 15.0% |
!!! | TTAATTTTTTTTTTTGGCAG+TGG | - | chr4_1:75279945-75279964 | Msa0572360:intron | 20.0% |
!! | TTGATATATTCTAATTTCTG+TGG | - | chr4_1:75280378-75280397 | Msa0572360:intron | 20.0% |
!!! | AGATTTTTGTTTACACTTAT+CGG | - | chr4_1:75280681-75280700 | Msa0572360:intron | 20.0% |
!! | CTAGTATATTCATGAAAAAT+TGG | - | chr4_1:75280818-75280837 | Msa0572360:CDS | 20.0% |
!! | TTAAATATTAAGGAACTGTA+TGG | - | chr4_1:75281303-75281322 | Msa0572360:CDS | 20.0% |
!!! | CATATTATTTTCAACTAGAA+AGG | - | chr4_1:75281860-75281879 | Msa0572360:intron | 20.0% |
!! | GTACCAAAAAAAAAAAAGAA+AGG | - | chr4_1:75281895-75281914 | Msa0572360:intron | 20.0% |
!! | TTGAAATATTGTACGTATTA+AGG | - | chr4_1:75282015-75282034 | Msa0572360:CDS | 20.0% |
!! | TGAAATATTGTACGTATTAA+GGG | - | chr4_1:75282016-75282035 | Msa0572360:CDS | 20.0% |
!!! | ATTCGAAACTTTTGAATTTT+TGG | - | chr4_1:75282218-75282237 | Msa0572360:intron | 20.0% |
!! | TGAACAGAATATAATTTGAT+GGG | + | chr4_1:75282370-75282389 | None:intergenic | 20.0% |
!!! | AGATTATATTTTGTTGACTT+TGG | - | chr4_1:75282668-75282687 | Msa0572360:intron | 20.0% |
!! | ATTGTATAGAATGAAAACTT+TGG | - | chr4_1:75282693-75282712 | Msa0572360:intron | 20.0% |
!!! | ATGAAAACTTTGGTATTTTT+TGG | - | chr4_1:75282703-75282722 | Msa0572360:intron | 20.0% |
!!! | GAAATACTCCATTTTTTTAT+AGG | - | chr4_1:75283102-75283121 | Msa0572360:intron | 20.0% |
!! | ATATATTATTTGCAACTAGT+CGG | + | chr4_1:75283211-75283230 | None:intergenic | 20.0% |
! | AAAGAGAATGATTAGAGAAA+TGG | + | chr4_1:75279431-75279450 | None:intergenic | 25.0% |
!!! | TTTTTTTTGTTTCTTCGTGT+AGG | - | chr4_1:75279517-75279536 | Msa0572360:intron | 25.0% |
!! | TTTTCTTTCGAATTTCAACT+TGG | + | chr4_1:75279619-75279638 | None:intergenic | 25.0% |
! | AATTGGTTGAAATTGAATTC+TGG | - | chr4_1:75279730-75279749 | Msa0572360:intron | 25.0% |
! | CAAAAAACACAATGAACATA+CGG | + | chr4_1:75280068-75280087 | None:intergenic | 25.0% |
! | AAGCAATTGAATGTAATCAA+AGG | + | chr4_1:75280145-75280164 | None:intergenic | 25.0% |
! | TATTTCCAAAATATGATGAG+TGG | - | chr4_1:75280262-75280281 | Msa0572360:intron | 25.0% |
! | CATGTAAAATATCTTCAACA+CGG | + | chr4_1:75280539-75280558 | None:intergenic | 25.0% |
!! | TGTTGAAGATATTTTACATG+TGG | - | chr4_1:75280539-75280558 | Msa0572360:intron | 25.0% |
!! | GTTGAAGATATTTTACATGT+GGG | - | chr4_1:75280540-75280559 | Msa0572360:intron | 25.0% |
! | CTACAAATGATAAAGATACT+TGG | + | chr4_1:75280663-75280682 | None:intergenic | 25.0% |
!! | TTTGAAACAATCAATGAGAA+TGG | + | chr4_1:75280867-75280886 | None:intergenic | 25.0% |
! | TGATAATTATATACTGGCAT+AGG | - | chr4_1:75280887-75280906 | Msa0572360:intron | 25.0% |
!! | CATGCTAACTTCAATTATTT+TGG | + | chr4_1:75280919-75280938 | None:intergenic | 25.0% |
!!! | AGTTAGCATGTTTAATTTTG+TGG | - | chr4_1:75280929-75280948 | Msa0572360:intron | 25.0% |
!! | TTGATTAGTTACACATATTC+TGG | - | chr4_1:75281372-75281391 | Msa0572360:CDS | 25.0% |
! | AATCAAGAGTTTCAAACATA+AGG | - | chr4_1:75281403-75281422 | Msa0572360:CDS | 25.0% |
! | CTGATATCTAATATTAAAGC+AGG | + | chr4_1:75281625-75281644 | None:intergenic | 25.0% |
!!! | CTGCCTTTCTTTTTTTTTTT+TGG | + | chr4_1:75281901-75281920 | None:intergenic | 25.0% |
! | AAGAAAATACACATTGAGTA+AGG | + | chr4_1:75282169-75282188 | None:intergenic | 25.0% |
!! | TTACTCAATGTGTATTTTCT+TGG | - | chr4_1:75282168-75282187 | Msa0572360:intron | 25.0% |
!! | AATTGGTGAAAATGATCTTT+TGG | + | chr4_1:75282307-75282326 | None:intergenic | 25.0% |
! | AATATAATTTGATGGGAAGT+GGG | + | chr4_1:75282363-75282382 | None:intergenic | 25.0% |
! | GTGAACAGAATATAATTTGA+TGG | + | chr4_1:75282371-75282390 | None:intergenic | 25.0% |
! | AAATTATATTCTGTTCACCT+TGG | - | chr4_1:75282373-75282392 | Msa0572360:intron | 25.0% |
!!! | AGGAAAACTTTGGTATTTTT+TGG | - | chr4_1:75282405-75282424 | Msa0572360:intron | 25.0% |
!!! | GTTGTCTCATTTTATTTAGT+TGG | - | chr4_1:75282454-75282473 | Msa0572360:intron | 25.0% |
!! | TTTAGTTGGTTTATTAGTCT+TGG | - | chr4_1:75282468-75282487 | Msa0572360:intron | 25.0% |
!!! | TTAGTTGGTTTATTAGTCTT+GGG | - | chr4_1:75282469-75282488 | Msa0572360:intron | 25.0% |
!! | TTATTGTTTCTTCTGTTATG+TGG | - | chr4_1:75282596-75282615 | Msa0572360:intron | 25.0% |
!! | TATTGTTTCTTCTGTTATGT+GGG | - | chr4_1:75282597-75282616 | Msa0572360:intron | 25.0% |
!! | GTTGTCTCATTTTATGTATT+TGG | - | chr4_1:75282752-75282771 | Msa0572360:intron | 25.0% |
! | AGAAGAAACAAAAAAGAATG+TGG | + | chr4_1:75282900-75282919 | None:intergenic | 25.0% |
!!! | TTTGTTTCTTCTGTTTTATG+TGG | - | chr4_1:75282908-75282927 | Msa0572360:CDS | 25.0% |
!!! | TTGTTTCTTCTGTTTTATGT+GGG | - | chr4_1:75282909-75282928 | Msa0572360:CDS | 25.0% |
TGAAACATATCAACTTGAGT+CGG | - | chr4_1:75279258-75279277 | Msa0572360:three_prime_UTR | 30.0% | |
ATTACTTTGACATTTGTCTG+TGG | - | chr4_1:75279707-75279726 | Msa0572360:intron | 30.0% | |
TACAACATTGAGATTGTGAT+CGG | + | chr4_1:75279765-75279784 | None:intergenic | 30.0% | |
GACAATGCATAAAATATGCA+AGG | + | chr4_1:75279990-75280009 | None:intergenic | 30.0% | |
TACATGTCAGGTTAAACTTA+AGG | - | chr4_1:75280234-75280253 | Msa0572360:intron | 30.0% | |
! | AAGTTCCACTCATCATATTT+TGG | + | chr4_1:75280270-75280289 | None:intergenic | 30.0% |
! | GAACAATGAGATCTTTTAGA+AGG | + | chr4_1:75280584-75280603 | None:intergenic | 30.0% |
TCTAAAAGATCTCATTGTTC+AGG | - | chr4_1:75280584-75280603 | Msa0572360:intron | 30.0% | |
TGCAAGATCAAACGATAATT+AGG | + | chr4_1:75280635-75280654 | None:intergenic | 30.0% | |
ATGAAAAATTGGAGTGATCA+GGG | - | chr4_1:75280829-75280848 | Msa0572360:CDS | 30.0% | |
TCAATGAGAATGGTTCATTA+AGG | + | chr4_1:75280857-75280876 | None:intergenic | 30.0% | |
GAAGAATAAGTTCATGTAGA+GGG | + | chr4_1:75280980-75280999 | None:intergenic | 30.0% | |
AGAAGAATAAGTTCATGTAG+AGG | + | chr4_1:75280981-75281000 | None:intergenic | 30.0% | |
AAGTTGTATTAGTGTGCATT+TGG | - | chr4_1:75281461-75281480 | Msa0572360:intron | 30.0% | |
AGTTGTATTAGTGTGCATTT+GGG | - | chr4_1:75281462-75281481 | Msa0572360:intron | 30.0% | |
CAACTAATCACATGTTTAGA+TGG | + | chr4_1:75281598-75281617 | None:intergenic | 30.0% | |
AGCATAGCTGATTATATTTG+TGG | - | chr4_1:75281649-75281668 | Msa0572360:intron | 30.0% | |
TGCACAAAAAAAATTACCTC+CGG | + | chr4_1:75281778-75281797 | None:intergenic | 30.0% | |
AAGGTTATTAGTATGCAACA+AGG | - | chr4_1:75282068-75282087 | Msa0572360:CDS | 30.0% | |
AAATGTTAGAAGTTATCAGG+GGG | + | chr4_1:75282134-75282153 | None:intergenic | 30.0% | |
CAAATGTTAGAAGTTATCAG+GGG | + | chr4_1:75282135-75282154 | None:intergenic | 30.0% | |
GCAAATGTTAGAAGTTATCA+GGG | + | chr4_1:75282136-75282155 | None:intergenic | 30.0% | |
!!! | AATTTTTGGCTTGAAAACCA+GGG | - | chr4_1:75282232-75282251 | Msa0572360:intron | 30.0% |
!! | TAACGGATTGATGAGAATAT+GGG | + | chr4_1:75282336-75282355 | None:intergenic | 30.0% |
!! | ATAACGGATTGATGAGAATA+TGG | + | chr4_1:75282337-75282356 | None:intergenic | 30.0% |
ATATAATTTGATGGGAAGTG+GGG | + | chr4_1:75282362-75282381 | None:intergenic | 30.0% | |
GAATATAATTTGATGGGAAG+TGG | + | chr4_1:75282364-75282383 | None:intergenic | 30.0% | |
AAAAAACTACCACATATGTG+TGG | - | chr4_1:75282510-75282529 | Msa0572360:intron | 30.0% | |
GAAGAAACAATAAAACGATG+TGG | + | chr4_1:75282589-75282608 | None:intergenic | 30.0% | |
!!! | TTTTTTGGAGTGTCATATGT+AGG | - | chr4_1:75282718-75282737 | Msa0572360:intron | 30.0% |
ATCTATAGCCAAATCTTCAT+TGG | + | chr4_1:75282852-75282871 | None:intergenic | 30.0% | |
AAAATAAACTGGTTAGCATC+TGG | - | chr4_1:75282940-75282959 | Msa0572360:CDS | 30.0% | |
TTACATAAGCAATGACATTG+AGG | + | chr4_1:75283071-75283090 | None:intergenic | 30.0% | |
CAACAGGTCCTATAAAAAAA+TGG | + | chr4_1:75283113-75283132 | None:intergenic | 30.0% | |
CATCAAGGTGAAACTTATAT+TGG | + | chr4_1:75283179-75283198 | None:intergenic | 30.0% | |
CAATATAAGTTTCACCTTGA+TGG | - | chr4_1:75283177-75283196 | Msa0572360:CDS | 30.0% | |
AACAGTAAACATCACAACAT+TGG | + | chr4_1:75283248-75283267 | None:intergenic | 30.0% | |
GCATTGAAATTTGATCCTCT+CGG | - | chr4_1:75279474-75279493 | Msa0572360:three_prime_UTR | 35.0% | |
AGATCAGACAAGAATATGAG+CGG | - | chr4_1:75279585-75279604 | Msa0572360:intron | 35.0% | |
TTGACATTTGTCTGTGGAAT+TGG | - | chr4_1:75279713-75279732 | Msa0572360:intron | 35.0% | |
ATTTGCCAAAGCTTGATTTC+TGG | - | chr4_1:75279870-75279889 | Msa0572360:intron | 35.0% | |
AATGACCAGAAATCAAGCTT+TGG | + | chr4_1:75279878-75279897 | None:intergenic | 35.0% | |
TGGATCATTATCGTGATGTT+CGG | - | chr4_1:75279904-75279923 | Msa0572360:intron | 35.0% | |
!!! | TTTTTTTTTTTGGCAGTGGC+CGG | - | chr4_1:75279949-75279968 | Msa0572360:intron | 35.0% |
TGCATAAAATATGCAAGGTG+CGG | + | chr4_1:75279985-75280004 | None:intergenic | 35.0% | |
GAATGTAATCAAAGGCAAGT+TGG | + | chr4_1:75280137-75280156 | None:intergenic | 35.0% | |
CATGAAAAATTGGAGTGATC+AGG | - | chr4_1:75280828-75280847 | Msa0572360:CDS | 35.0% | |
TGAAAAATTGGAGTGATCAG+GGG | - | chr4_1:75280830-75280849 | Msa0572360:intron | 35.0% | |
GAACATGAACTTTACCAGTA+GGG | + | chr4_1:75281272-75281291 | None:intergenic | 35.0% | |
AGAACATGAACTTTACCAGT+AGG | + | chr4_1:75281273-75281292 | None:intergenic | 35.0% | |
ACTGTATGGATCTGTTAATC+AGG | - | chr4_1:75281317-75281336 | Msa0572360:CDS | 35.0% | |
CTGTATGGATCTGTTAATCA+GGG | - | chr4_1:75281318-75281337 | Msa0572360:CDS | 35.0% | |
TGCTCAGTCAACTAAAAACA+CGG | + | chr4_1:75281432-75281451 | None:intergenic | 35.0% | |
TAAATCACGACAGTACCATA+TGG | - | chr4_1:75281493-75281512 | Msa0572360:intron | 35.0% | |
ATTTGTGGAAAATTCAGCTC+TGG | - | chr4_1:75281664-75281683 | Msa0572360:intron | 35.0% | |
GTGAAAATACTCTTGATGCA+CGG | - | chr4_1:75281725-75281744 | Msa0572360:intron | 35.0% | |
GTATTAAGGGTAAGATAGCT+GGG | - | chr4_1:75282029-75282048 | Msa0572360:CDS | 35.0% | |
TATTAAGGGTAAGATAGCTG+GGG | - | chr4_1:75282030-75282049 | Msa0572360:CDS | 35.0% | |
CGCAAATGTTAGAAGTTATC+AGG | + | chr4_1:75282137-75282156 | None:intergenic | 35.0% | |
!!! | GAATTTTTGGCTTGAAAACC+AGG | - | chr4_1:75282231-75282250 | Msa0572360:intron | 35.0% |
GAGCAGTATAGCAAATACAA+AGG | + | chr4_1:75282285-75282304 | None:intergenic | 35.0% | |
GAGAATATGGGAGGAATAAT+TGG | + | chr4_1:75282324-75282343 | None:intergenic | 35.0% | |
TCCTGTTTACGAGAATATGT+GGG | - | chr4_1:75282432-75282451 | Msa0572360:intron | 35.0% | |
! | TCAAAGGATGATTTGGCAAT+AGG | - | chr4_1:75282534-75282553 | Msa0572360:intron | 35.0% |
GGTCATATGACAATCAAAGT+TGG | - | chr4_1:75282555-75282574 | Msa0572360:intron | 35.0% | |
TGACAATCAAAGTTGGCAAT+AGG | - | chr4_1:75282562-75282581 | Msa0572360:intron | 35.0% | |
TCATATGTAGGAGAATACGA+GGG | - | chr4_1:75282730-75282749 | Msa0572360:intron | 35.0% | |
!! | GGGAAGTGTTGAAAATAAAC+TGG | - | chr4_1:75282929-75282948 | Msa0572360:CDS | 35.0% |
ATTGAGGATATGTATTCCAG+GGG | + | chr4_1:75283055-75283074 | None:intergenic | 35.0% | |
CATTGAGGATATGTATTCCA+GGG | + | chr4_1:75283056-75283075 | None:intergenic | 35.0% | |
ACATTGAGGATATGTATTCC+AGG | + | chr4_1:75283057-75283076 | None:intergenic | 35.0% | |
ATACACGATATGAGAACAAC+AGG | + | chr4_1:75283129-75283148 | None:intergenic | 35.0% | |
TGTTCTCATATCGTGTATGA+TGG | - | chr4_1:75283131-75283150 | Msa0572360:CDS | 35.0% | |
GTTCTCATATCGTGTATGAT+GGG | - | chr4_1:75283132-75283151 | Msa0572360:CDS | 35.0% | |
TTCTCATATCGTGTATGATG+GGG | - | chr4_1:75283133-75283152 | Msa0572360:CDS | 35.0% | |
CAGGAAAACAAGTTCGTCAA+TGG | + | chr4_1:75279284-75279303 | None:intergenic | 40.0% | |
TCTTCTCCGAAAATGAACGA+CGG | - | chr4_1:75279308-75279327 | Msa0572360:three_prime_UTR | 40.0% | |
! | ACATCACCGTCGTTCATTTT+CGG | + | chr4_1:75279317-75279336 | None:intergenic | 40.0% |
! | CTTTTTCTTCAGCTTCTTGG+CGG | + | chr4_1:75279373-75279392 | None:intergenic | 40.0% |
!! | TGGCTTTTTCTTCAGCTTCT+TGG | + | chr4_1:75279376-75279395 | None:intergenic | 40.0% |
CAATATCGAGAAGCTTCAGT+TGG | - | chr4_1:75279544-75279563 | Msa0572360:intron | 40.0% | |
! | TTGTGTCACTATCACATGCA+AGG | + | chr4_1:75279832-75279851 | None:intergenic | 40.0% |
ACATCACGATAATGATCCAC+TGG | + | chr4_1:75279903-75279922 | None:intergenic | 40.0% | |
!!! | TTTTTTTTTTGGCAGTGGCC+GGG | - | chr4_1:75279950-75279969 | Msa0572360:intron | 40.0% |
CATAAAATATGCAAGGTGCG+GGG | + | chr4_1:75279983-75280002 | None:intergenic | 40.0% | |
GCATAAAATATGCAAGGTGC+GGG | + | chr4_1:75279984-75280003 | None:intergenic | 40.0% | |
TGTAGAACTGACACTTCTGA+TGG | - | chr4_1:75280089-75280108 | Msa0572360:intron | 40.0% | |
!! | AATCAAAGGCAAGTTGGTGT+CGG | + | chr4_1:75280131-75280150 | None:intergenic | 40.0% |
ACTCACTGCCACAAACAATT+GGG | + | chr4_1:75280404-75280423 | None:intergenic | 40.0% | |
TACTCACTGCCACAAACAAT+TGG | + | chr4_1:75280405-75280424 | None:intergenic | 40.0% | |
AATGAAAGAAGTTGCAGCCA+AGG | - | chr4_1:75280488-75280507 | Msa0572360:intron | 40.0% | |
GCTCACATTCAAAAGTTCCT+TGG | + | chr4_1:75280508-75280527 | None:intergenic | 40.0% | |
TATCTTCAACACGGTGATGA+CGG | + | chr4_1:75280530-75280549 | None:intergenic | 40.0% | |
AGTTCATGTAGAGGGAAAGA+GGG | + | chr4_1:75280972-75280991 | None:intergenic | 40.0% | |
AAGTTCATGTAGAGGGAAAG+AGG | + | chr4_1:75280973-75280992 | None:intergenic | 40.0% | |
ACATACTTGTGCATAGAAGG+CGG | + | chr4_1:75281019-75281038 | None:intergenic | 40.0% | |
TCCACATACTTGTGCATAGA+AGG | + | chr4_1:75281022-75281041 | None:intergenic | 40.0% | |
TATGCACAAGTATGTGGACT+AGG | - | chr4_1:75281024-75281043 | Msa0572360:intron | 40.0% | |
! | CTTCTGTCTTGTTGAGATGT+CGG | - | chr4_1:75281102-75281121 | Msa0572360:intron | 40.0% |
!! | CAGGAGTATTCTGAAAAAGC+AGG | - | chr4_1:75281170-75281189 | Msa0572360:intron | 40.0% |
TTGTGGTCAACAATGATCTC+TGG | + | chr4_1:75281206-75281225 | None:intergenic | 40.0% | |
!! | TCGTGAGTTTTGTGATGCTT+GGG | + | chr4_1:75281248-75281267 | None:intergenic | 40.0% |
!! | TTCGTGAGTTTTGTGATGCT+TGG | + | chr4_1:75281249-75281268 | None:intergenic | 40.0% |
TGTAGAGTCGTTTGACCATA+TGG | + | chr4_1:75281511-75281530 | None:intergenic | 40.0% | |
AGTGTTCCGTAAAAAGCTTC+CGG | - | chr4_1:75281756-75281775 | Msa0572360:intron | 40.0% | |
! | TTACCTCCGGAAGCTTTTTA+CGG | + | chr4_1:75281765-75281784 | None:intergenic | 40.0% |
CGTATTAAGGGTAAGATAGC+TGG | - | chr4_1:75282028-75282047 | Msa0572360:CDS | 40.0% | |
! | AAAGGTGCAAACAGAGAGAA+GGG | + | chr4_1:75282267-75282286 | None:intergenic | 40.0% |
TTCTGTTCACCTTGGATATC+TGG | - | chr4_1:75282381-75282400 | Msa0572360:intron | 40.0% | |
TCTGTTCACCTTGGATATCT+GGG | - | chr4_1:75282382-75282401 | Msa0572360:intron | 40.0% | |
GATATCTGGGAGGAAAACTT+TGG | - | chr4_1:75282395-75282414 | Msa0572360:intron | 40.0% | |
GTCCTGTTTACGAGAATATG+TGG | - | chr4_1:75282431-75282450 | Msa0572360:intron | 40.0% | |
ACCCACATATTCTCGTAAAC+AGG | + | chr4_1:75282436-75282455 | None:intergenic | 40.0% | |
TGGGTGATGTTGAAAATGAC+TGG | - | chr4_1:75282616-75282635 | Msa0572360:intron | 40.0% | |
! | GAAAATGACTGGTTAGCATC+TGG | - | chr4_1:75282627-75282646 | Msa0572360:intron | 40.0% |
GTCATATGTAGGAGAATACG+AGG | - | chr4_1:75282729-75282748 | Msa0572360:intron | 40.0% | |
!!! | GGTCTTCTGCTATTTTGTCT+TGG | - | chr4_1:75282781-75282800 | Msa0572360:intron | 40.0% |
CACATGAGTGCAAACATATG+TGG | + | chr4_1:75282824-75282843 | None:intergenic | 40.0% | |
CATATGTTTGCACTCATGTG+TGG | - | chr4_1:75282824-75282843 | Msa0572360:intron | 40.0% | |
TCTCATATCGTGTATGATGG+GGG | - | chr4_1:75283134-75283153 | Msa0572360:CDS | 40.0% | |
! | CATTTTCGGAGAAGATCGAC+AGG | + | chr4_1:75279303-75279322 | None:intergenic | 45.0% |
CTCTAAGCAAATCCACCAGA+TGG | - | chr4_1:75279337-75279356 | Msa0572360:three_prime_UTR | 45.0% | |
GGATAAATCTCACCATCTGG+TGG | + | chr4_1:75279352-75279371 | None:intergenic | 45.0% | |
AGGAGAATTACATTGCCGAG+AGG | + | chr4_1:75279492-75279511 | None:intergenic | 45.0% | |
!! | GATTTCTGGTCATTGTCCAG+TGG | - | chr4_1:75279884-75279903 | Msa0572360:intron | 45.0% |
!!! | TTTTTTTTTGGCAGTGGCCG+GGG | - | chr4_1:75279951-75279970 | Msa0572360:intron | 45.0% |
! | TGAGCTTAGCTCAGTTGGTA+TGG | + | chr4_1:75280012-75280031 | None:intergenic | 45.0% |
!! | ATGAAGCACTGAGAGAGACA+CGG | + | chr4_1:75280215-75280234 | None:intergenic | 45.0% |
CTCAGTGCTTCATACATGTC+AGG | - | chr4_1:75280222-75280241 | Msa0572360:intron | 45.0% | |
TTCTGTGGCCCAATTGTTTG+TGG | - | chr4_1:75280393-75280412 | Msa0572360:intron | 45.0% | |
CAATGCAGCTGAATGCTTCT+CGG | - | chr4_1:75280427-75280446 | Msa0572360:intron | 45.0% | |
ATGTAGAGGGAAAGAGGGAA+GGG | + | chr4_1:75280967-75280986 | None:intergenic | 45.0% | |
GCCTTCTATGCACAAGTATG+TGG | - | chr4_1:75281018-75281037 | Msa0572360:intron | 45.0% | |
CGACATCTCAACAAGACAGA+AGG | + | chr4_1:75281104-75281123 | None:intergenic | 45.0% | |
TGGTCAACAATGATCTCTGG+TGG | + | chr4_1:75281203-75281222 | None:intergenic | 45.0% | |
CAGGTGGAAGATAGACATTG+TGG | + | chr4_1:75281223-75281242 | None:intergenic | 45.0% | |
ACAAAACTCACGAACCCTAC+TGG | - | chr4_1:75281255-75281274 | Msa0572360:CDS | 45.0% | |
CGTAAGAAAGCCTTCTCTGA+TGG | - | chr4_1:75281572-75281591 | Msa0572360:intron | 45.0% | |
GTTTAGATGGCCATCAGAGA+AGG | + | chr4_1:75281585-75281604 | None:intergenic | 45.0% | |
! | TGTGGAAAATTCAGCTCTGG+TGG | - | chr4_1:75281667-75281686 | Msa0572360:intron | 45.0% |
! | GTGGAAAATTCAGCTCTGGT+GGG | - | chr4_1:75281668-75281687 | Msa0572360:intron | 45.0% |
! | TGGAAAATTCAGCTCTGGTG+GGG | - | chr4_1:75281669-75281688 | Msa0572360:intron | 45.0% |
AAATACTCTTGATGCACGGC+TGG | - | chr4_1:75281729-75281748 | Msa0572360:intron | 45.0% | |
AAGGTGCAAACAGAGAGAAG+GGG | + | chr4_1:75282266-75282285 | None:intergenic | 45.0% | |
! | CAAAGGTGCAAACAGAGAGA+AGG | + | chr4_1:75282268-75282287 | None:intergenic | 45.0% |
CGGATTGATGAGAATATGGG+AGG | + | chr4_1:75282333-75282352 | None:intergenic | 45.0% | |
! | GTTTTCCTCCCAGATATCCA+AGG | + | chr4_1:75282393-75282412 | None:intergenic | 45.0% |
ACCACATATGTGTGGCTCAA+AGG | - | chr4_1:75282518-75282537 | Msa0572360:intron | 45.0% | |
TCCTTTGAGCCACACATATG+TGG | + | chr4_1:75282522-75282541 | None:intergenic | 45.0% | |
GTGTGGCTCAAAGGATGATT+TGG | - | chr4_1:75282527-75282546 | Msa0572360:intron | 45.0% | |
GTGTGGCTCCAATGAAGATT+TGG | - | chr4_1:75282841-75282860 | Msa0572360:intron | 45.0% | |
! | CTTGTCCAAAGAGCTGCTTT+CGG | + | chr4_1:75283000-75283019 | None:intergenic | 45.0% |
! | TCGATTACATTTGTTGCCCC+TGG | - | chr4_1:75283036-75283055 | Msa0572360:intron | 45.0% |
AGTCGGAGAAAACACCATCA+AGG | + | chr4_1:75283194-75283213 | None:intergenic | 45.0% | |
GGCGGATAAATCTCACCATC+TGG | + | chr4_1:75279355-75279374 | None:intergenic | 50.0% | |
GATCTCTCTCTCTGCTGAAG+AGG | - | chr4_1:75279400-75279419 | Msa0572360:three_prime_UTR | 50.0% | |
! | ATCCGGTGTCAACATGTGTC+TGG | - | chr4_1:75280186-75280205 | Msa0572360:intron | 50.0% |
CACCAGACACATGTTGACAC+CGG | + | chr4_1:75280191-75280210 | None:intergenic | 50.0% | |
CATGTAGAGGGAAAGAGGGA+AGG | + | chr4_1:75280968-75280987 | None:intergenic | 50.0% | |
TCGGAAACATGACGTGCACT+TGG | - | chr4_1:75281121-75281140 | Msa0572360:intron | 50.0% | |
! | GTTTTGTGATGCTTGGGTGC+AGG | + | chr4_1:75281242-75281261 | None:intergenic | 50.0% |
! | AAAATTCAGCTCTGGTGGGG+TGG | - | chr4_1:75281672-75281691 | Msa0572360:intron | 50.0% |
GTTCCGTAAAAAGCTTCCGG+AGG | - | chr4_1:75281759-75281778 | Msa0572360:intron | 50.0% | |
TAAGGGTAAGATAGCTGGGG+AGG | - | chr4_1:75282033-75282052 | Msa0572360:CDS | 50.0% | |
AAGGGTAAGATAGCTGGGGA+GGG | - | chr4_1:75282034-75282053 | Msa0572360:CDS | 50.0% | |
GAGAAGGGGAAAAATCTCCC+TGG | + | chr4_1:75282252-75282271 | None:intergenic | 50.0% | |
GATGGGAAGTGGGGTGATAA+CGG | + | chr4_1:75282353-75282372 | None:intergenic | 50.0% | |
GTTCACCTTGGATATCTGGG+AGG | - | chr4_1:75282385-75282404 | Msa0572360:intron | 50.0% | |
! | AAGAGCTGCTTTCGGATCTG+TGG | + | chr4_1:75282992-75283011 | None:intergenic | 50.0% |
CAGATCCGAAAGCAGCTCTT+TGG | - | chr4_1:75282992-75283011 | Msa0572360:intron | 50.0% | |
AGCAGAGAGAGAGATCTCGC+TGG | + | chr4_1:75279396-75279415 | None:intergenic | 55.0% | |
CCTCGTGAGCTTAGCTCAGT+TGG | + | chr4_1:75280017-75280036 | None:intergenic | 55.0% | |
CCAACTGAGCTAAGCTCACG+AGG | - | chr4_1:75280014-75280033 | Msa0572360:intron | 55.0% | |
! | GCACTTGGTAGCACATGTGC+TGG | - | chr4_1:75281136-75281155 | Msa0572360:intron | 55.0% |
TTGTGATGCTTGGGTGCAGG+TGG | + | chr4_1:75281239-75281258 | None:intergenic | 55.0% | |
!! | GTGGTGTTGGCTTCTCGTGA+TGG | - | chr4_1:75281691-75281710 | Msa0572360:intron | 55.0% |
ATAGCTGGGGAGGGACTTCA+GGG | - | chr4_1:75282043-75282062 | Msa0572360:CDS | 55.0% | |
! | TCGTGTATGATGGGGGCATG+TGG | - | chr4_1:75283141-75283160 | Msa0572360:CDS | 55.0% |
AAGGTGCGGGGTTCAAACCC+CGG | + | chr4_1:75279971-75279990 | None:intergenic | 60.0% | |
TGTGCTGGATGCAGCTGCAC+AGG | - | chr4_1:75281151-75281170 | Msa0572360:intron | 60.0% | |
GATAGCTGGGGAGGGACTTC+AGG | - | chr4_1:75282042-75282061 | Msa0572360:CDS | 60.0% | |
! | CAGCTCTGGTGGGGTGGTGT+TGG | - | chr4_1:75281678-75281697 | Msa0572360:intron | 65.0% |
GGGGAGGGACTTCAGGGCTA+AGG | - | chr4_1:75282049-75282068 | Msa0572360:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 75279257 | 75283272 | 75279257 | ID=Msa0572360;Name=Msa0572360 |
chr4_1 | mRNA | 75279257 | 75283272 | 75279257 | ID=Msa0572360-mRNA-1;Parent=Msa0572360;Name=Msa0572360-mRNA-1;_AED=0.16;_eAED=0.16;_QI=63|1|1|1|1|1|6|242|240 |
chr4_1 | exon | 75279257 | 75279534 | 75279257 | ID=Msa0572360-mRNA-1:exon:26053;Parent=Msa0572360-mRNA-1 |
chr4_1 | exon | 75280749 | 75280848 | 75280749 | ID=Msa0572360-mRNA-1:exon:26052;Parent=Msa0572360-mRNA-1 |
chr4_1 | exon | 75281253 | 75281449 | 75281253 | ID=Msa0572360-mRNA-1:exon:26051;Parent=Msa0572360-mRNA-1 |
chr4_1 | exon | 75281924 | 75282110 | 75281924 | ID=Msa0572360-mRNA-1:exon:26050;Parent=Msa0572360-mRNA-1 |
chr4_1 | exon | 75282890 | 75282990 | 75282890 | ID=Msa0572360-mRNA-1:exon:26049;Parent=Msa0572360-mRNA-1 |
chr4_1 | exon | 75283108 | 75283272 | 75283108 | ID=Msa0572360-mRNA-1:exon:26048;Parent=Msa0572360-mRNA-1 |
chr4_1 | five_prime_UTR | 75283210 | 75283272 | 75283210 | ID=Msa0572360-mRNA-1:five_prime_utr;Parent=Msa0572360-mRNA-1 |
chr4_1 | CDS | 75283108 | 75283209 | 75283108 | ID=Msa0572360-mRNA-1:cds;Parent=Msa0572360-mRNA-1 |
chr4_1 | CDS | 75282890 | 75282990 | 75282890 | ID=Msa0572360-mRNA-1:cds;Parent=Msa0572360-mRNA-1 |
chr4_1 | CDS | 75281924 | 75282110 | 75281924 | ID=Msa0572360-mRNA-1:cds;Parent=Msa0572360-mRNA-1 |
chr4_1 | CDS | 75281253 | 75281449 | 75281253 | ID=Msa0572360-mRNA-1:cds;Parent=Msa0572360-mRNA-1 |
chr4_1 | CDS | 75280749 | 75280848 | 75280749 | ID=Msa0572360-mRNA-1:cds;Parent=Msa0572360-mRNA-1 |
chr4_1 | CDS | 75279499 | 75279534 | 75279499 | ID=Msa0572360-mRNA-1:cds;Parent=Msa0572360-mRNA-1 |
chr4_1 | three_prime_UTR | 75279257 | 75279498 | 75279257 | ID=Msa0572360-mRNA-1:three_prime_utr;Parent=Msa0572360-mRNA-1 |
Gene Sequence |
Protein sequence |