AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0300670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0300670 MtrunA17_Chr2g0325821 99.689 966 3 0 1 966 1 966 0.0 1994
Msa0300670 MtrunA17_Chr4g0041131 91.408 966 83 0 1 966 1 966 0.0 1821
Msa0300670 MtrunA17_Chr8g0360571 87.810 968 115 2 1 966 1 967 0.0 1753
Msa0300670 MtrunA17_Chr2g0315891 85.331 968 138 3 1 966 1 966 0.0 1697
Msa0300670 MtrunA17_Chr1g0198921 45.032 624 294 5 359 966 449 1039 1.16e-170 525
Msa0300670 MtrunA17_Chr1g0198921 39.576 283 155 6 77 359 71 337 1.72e-51 196
Msa0300670 MtrunA17_Chr0c01g0489521 45.227 639 285 8 359 966 548 1152 2.71e-167 520
Msa0300670 MtrunA17_Chr0c01g0489521 35.897 312 170 7 70 367 105 400 6.90e-47 182
Msa0300670 MtrunA17_Chr1g0148101 67.725 378 56 7 461 838 1 312 2.11e-158 468
Msa0300670 MtrunA17_Chr1g0148111 53.030 132 18 3 339 428 9 138 7.06e-30 116
Msa0300670 MtrunA17_Chr1g0148091 100.000 51 0 0 916 966 1 51 5.60e-28 107
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0300670 AT1G53310.2 86.246 967 132 1 1 966 1 967 0.0 1731
Msa0300670 AT1G53310.1 86.246 967 132 1 1 966 1 967 0.0 1731
Msa0300670 AT1G53310.3 86.246 967 132 1 1 966 1 967 0.0 1731
Msa0300670 AT3G14940.1 86.467 968 129 2 1 966 1 968 0.0 1724
Msa0300670 AT3G14940.2 86.467 968 129 2 1 966 1 968 0.0 1724
Msa0300670 AT2G42600.2 86.749 966 125 3 1 966 1 963 0.0 1722
Msa0300670 AT2G42600.1 86.749 966 125 3 1 966 1 963 0.0 1722
Msa0300670 AT2G42600.3 86.749 966 125 3 1 966 1 963 0.0 1722
Msa0300670 AT1G68750.1 45.631 618 287 6 365 966 448 1032 7.47e-172 528
Msa0300670 AT1G68750.1 34.278 353 202 8 36 375 23 358 9.02e-46 179
Msa0300670 AT3G42628.1 88.889 45 5 0 1 45 1 45 1.36e-18 80.5

Find 237 sgRNAs with CRISPR-Local

Find 373 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGCTTAATTTGGCAAATT+TGG 0.085610 2_3:-56138705 Msa0300670:CDS
TTTAAAATGTTGCAGAATTT+TGG 0.096818 2_3:-56137041 Msa0300670:intron
CTGTTATCCAATTCTCTTCT+TGG 0.134229 2_3:-56137655 Msa0300670:CDS
ATATATGTATTTGTATAATT+TGG 0.153254 2_3:-56134456 Msa0300670:three_prime_UTR
TCGGAAATTTCTTCTGTCTT+AGG 0.162402 2_3:+56136499 None:intergenic
TACCCTTCATTGTCAAAATA+AGG 0.178646 2_3:+56134520 None:intergenic
ATATTATATAATAAAGAATT+TGG 0.194576 2_3:-56134358 Msa0300670:three_prime_UTR
ACAATCAATGGCCTTTCTTT+AGG 0.212782 2_3:-56135479 Msa0300670:CDS
TGTAGGCTTGTAAGACATTA+AGG 0.216785 2_3:+56134685 None:intergenic
ACCGGAATGGCGTGCCCTTT+TGG 0.219753 2_3:-56135885 Msa0300670:CDS
AGAAGAAATTTCCGATGTTT+TGG 0.223228 2_3:-56136491 Msa0300670:CDS
AGGGCACGCCATTCCGGTTT+TGG 0.234797 2_3:+56135890 None:intergenic
TGAGATTTGGATTGGCAATT+TGG 0.247991 2_3:-56134401 Msa0300670:three_prime_UTR
TATAATAAAGAATTTGGTTT+TGG 0.249347 2_3:-56134352 Msa0300670:three_prime_UTR
TTACCAGTTTGGCTTGGTTT+TGG 0.250938 2_3:-56135564 Msa0300670:CDS
CATCTCTCTTTGAGGATTCA+TGG 0.255538 2_3:+56137221 None:intergenic
CTAGTTGGTTCCAAGTTAAT+AGG 0.256042 2_3:+56139656 None:intergenic
GCTACTTTCACGAGACAATT+TGG 0.257756 2_3:-56137760 Msa0300670:CDS
CAATCAATGGCCTTTCTTTA+GGG 0.264660 2_3:-56135478 Msa0300670:CDS
AGCCTCTTGAACTGTGTTAC+AGG 0.272801 2_3:-56136774 Msa0300670:CDS
GGAGCATAGGCCAGAGAAAT+TGG 0.276169 2_3:-56138798 Msa0300670:CDS
TTTGTGAAGGTTGTCTCTTC+AGG 0.278547 2_3:+56136904 None:intergenic
CAGTTTGATTAAACATTTAT+CGG 0.284710 2_3:+56134298 None:intergenic
GAAGAGTCAAACTGTTGATT+TGG 0.296372 2_3:-56138522 Msa0300670:CDS
TATTATGCCTGCCTGAGATT+TGG 0.301593 2_3:-56134414 Msa0300670:three_prime_UTR
GAACCTTATCGTGTCATTCT+TGG 0.301781 2_3:-56137000 Msa0300670:CDS
ATTCAACAAAACGAGGTTCT+TGG 0.307332 2_3:+56135816 None:intergenic
TGGATAACAGGAGCATTATA+TGG 0.310954 2_3:+56137668 None:intergenic
TACTATTCACGGCTCACTTC+GGG 0.314131 2_3:-56136029 Msa0300670:CDS
TTGCGGCAAGTTTCTACATT+TGG 0.315675 2_3:-56136697 Msa0300670:CDS
CAAGGTTTCATTTACCAGTT+TGG 0.316524 2_3:-56135575 Msa0300670:CDS
CGGAAATTTCTTCTGTCTTA+GGG 0.330972 2_3:+56136500 None:intergenic
ATGATAGGATACTCAGATTC+AGG 0.341531 2_3:-56136223 Msa0300670:CDS
CCAAGTTCCTCCAATTTCTC+TGG 0.341847 2_3:+56138788 None:intergenic
AACTAAGAGCTTGTCGTATA+AGG 0.343234 2_3:+56135401 None:intergenic
ACATTTGTCAAAGGAGTATA+TGG 0.345788 2_3:-56134616 Msa0300670:CDS
TCCAAAAGGGCACGCCATTC+CGG 0.346382 2_3:+56135884 None:intergenic
CTCCCATCCAAGAAGAGAAT+TGG 0.351377 2_3:+56137648 None:intergenic
CTCATCTTCACATGGTAATC+TGG 0.358625 2_3:+56134642 None:intergenic
TCGTATAAGGAAGCGATCCC+GGG 0.367948 2_3:+56135414 None:intergenic
GCAATGACGAGCTTCGTGTT+AGG 0.368896 2_3:-56137255 Msa0300670:CDS
GAAGTTATTGAACAATCGTT+TGG 0.369185 2_3:-56135992 Msa0300670:CDS
TTCAATTCAGAGAGAAAATA+TGG 0.371779 2_3:-56139502 Msa0300670:exon
GAAGAATCTTCAAATGCTTC+AGG 0.372632 2_3:-56135508 Msa0300670:CDS
TGCGTTCCTCTGACCATTCT+CGG 0.377403 2_3:+56136581 None:intergenic
GCAACACCAGAGTTAGAATA+TGG 0.380854 2_3:-56135693 Msa0300670:CDS
CACACATCCCTTGTAACTTC+AGG 0.383093 2_3:+56137458 None:intergenic
CAAGAAGAGAATTGGATAAC+AGG 0.386648 2_3:+56137656 None:intergenic
CGTAGCCGTTGCTTTAAGTA+AGG 0.388601 2_3:+56134732 None:intergenic
CTTCTTGCTTTCCATTGATT+CGG 0.390127 2_3:+56136248 None:intergenic
TGATGCTCAGTTGAGACTAT+TGG 0.395059 2_3:-56139448 Msa0300670:CDS
GGAGTATGATGCTTTGTTGT+TGG 0.396140 2_3:-56139391 Msa0300670:CDS
TATCCAATTCTCTTCTTGGA+TGG 0.397742 2_3:-56137651 Msa0300670:CDS
ATTAACGTAGCAAAGGAGTT+TGG 0.402285 2_3:-56136142 Msa0300670:CDS
CCAGAGAAATTGGAGGAACT+TGG 0.403210 2_3:-56138788 Msa0300670:CDS
TCCTCCTGTGTCTCCAAAAC+CGG 0.404734 2_3:-56135903 Msa0300670:CDS
TCTCCAAAACCAAGCCAAAC+TGG 0.408191 2_3:+56135561 None:intergenic
AGTTCTCATTAGCTAATAAC+TGG 0.411418 2_3:+56136935 None:intergenic
CTTTAGGGTTACCATTGACT+TGG 0.411933 2_3:-56135463 Msa0300670:CDS
TCAAGTTCTTGCTTATCATC+TGG 0.412579 2_3:+56138041 None:intergenic
TTCAAATTGCATATAGAAGA+AGG 0.414598 2_3:-56138673 Msa0300670:CDS
ATGACACGATAAGGTTCGTT+TGG 0.415193 2_3:+56137006 None:intergenic
GAACTTCCCTCAGACAGCTT+TGG 0.415801 2_3:-56136448 Msa0300670:CDS
CCTGCTCTCATTTCATCTTG+TGG 0.418113 2_3:+56137788 None:intergenic
TGAAGCATTTGAAGATTCTT+CGG 0.419463 2_3:+56135510 None:intergenic
ACCCTTCATTGTCAAAATAA+GGG 0.420370 2_3:+56134521 None:intergenic
ACACAAGAGCTGTGTCCATT+TGG 0.425017 2_3:-56135378 Msa0300670:CDS
AATCGCTCCGAGCTATTCCT+TGG 0.425872 2_3:-56135617 Msa0300670:CDS
TTCAATATCTGACTCAGTTA+TGG 0.427469 2_3:+56138607 None:intergenic
AGAGAGGCACACAGACGTTA+TGG 0.427767 2_3:-56136638 Msa0300670:CDS
TTGTGATATATGAGTCTCTA+AGG 0.429244 2_3:+56134709 None:intergenic
CAATGACGAGCTTCGTGTTA+GGG 0.433700 2_3:-56137254 Msa0300670:CDS
ATCCAATTCTCTTCTTGGAT+GGG 0.436092 2_3:-56137650 Msa0300670:CDS
TACCTTGAGGAGAAAGCTCT+TGG 0.437664 2_3:+56135326 None:intergenic
AAAAGTCGCGCTACAGCAGC+AGG 0.443393 2_3:+56136292 None:intergenic
TGTGCCTCTCTGACTCTTGA+CGG 0.444073 2_3:+56136650 None:intergenic
ATTACAAAACACCTGGAGAT+TGG 0.448262 2_3:-56136610 Msa0300670:CDS
ATCAAACTGTTTATTTGTGA+AGG 0.450754 2_3:-56134284 None:intergenic
AGAGATGCAAAACATTATAT+CGG 0.451317 2_3:-56137205 Msa0300670:intron
TACCATTGACTTGGTTGAGA+TGG 0.453067 2_3:-56135454 Msa0300670:CDS
GGAAAGCAAGAAGTTATGAT+AGG 0.456460 2_3:-56136238 Msa0300670:CDS
GTCGTATAAGGAAGCGATCC+CGG 0.458012 2_3:+56135413 None:intergenic
TGTGCATTACAGGCAATCCT+AGG 0.458396 2_3:-56137487 Msa0300670:intron
CAGGTCGTCTATCTGCTGCT+TGG 0.460146 2_3:-56136192 Msa0300670:CDS
TTCACGAGACAATTTGGAAA+GGG 0.461021 2_3:-56137754 Msa0300670:CDS
GATCTCAGACGCTCACCAAA+TGG 0.463915 2_3:+56135363 None:intergenic
ATGCTAACTGGTCTTGATGC+TGG 0.466416 2_3:-56138761 Msa0300670:CDS
CAACCGTCCCACCTCGGCCG+TGG 0.467082 2_3:+56136101 None:intergenic
TGACAGCCATCTCATCCAAA+AGG 0.467508 2_3:+56135870 None:intergenic
AGCGATCCCGGGGTCTCCCT+TGG 0.469910 2_3:+56135425 None:intergenic
AGGATTAAGTTACTGAAGAA+AGG 0.470355 2_3:-56138653 Msa0300670:CDS
CTTCTGTCTTAGGGAGATCA+TGG 0.470815 2_3:+56136509 None:intergenic
CTCATTTCATCTTGTGGTGT+AGG 0.471556 2_3:+56137794 None:intergenic
TCACTTCGGGTAACAGTTCA+AGG 0.472913 2_3:-56136016 Msa0300670:CDS
GAACTTGGGAATATGCTAAC+TGG 0.473063 2_3:-56138773 Msa0300670:CDS
TGGTACAGAAACCGAATCAA+TGG 0.473285 2_3:-56136259 Msa0300670:CDS
ATGATGCTTTGTTGTTGGAT+AGG 0.473945 2_3:-56139386 Msa0300670:CDS
CCTTATCGTGTCATTCTTGG+AGG 0.474642 2_3:-56136997 Msa0300670:CDS
GTAGGCTTGTAAGACATTAA+GGG 0.481765 2_3:+56134686 None:intergenic
AGTTTAACAAGTTCTGCTGC+TGG 0.481818 2_3:+56134582 None:intergenic
GGGACGGTTGGAAGAGGTGG+TGG 0.481952 2_3:-56136088 Msa0300670:CDS
CATTTGGACTTTCACTCGTA+AGG 0.482646 2_3:-56136681 Msa0300670:CDS
TGTTGCCATTGAGATGATAT+AGG 0.484931 2_3:+56136423 None:intergenic
AGGTCGTCTATCTGCTGCTT+GGG 0.485718 2_3:-56136191 Msa0300670:CDS
GCGTTAGTTAGTTACACAAT+TGG 0.486573 2_3:-56139741 Msa0300670:five_prime_UTR
TACTCGTAACATTGAAAAGA+TGG 0.486930 2_3:-56139478 Msa0300670:CDS
CGAGGTGGGACGGTTGGAAG+AGG 0.486962 2_3:-56136094 Msa0300670:CDS
ACGAATTTGCTTCAATGTGT+AGG 0.489412 2_3:+56134668 None:intergenic
AGCGATTCAATTCCTCCACT+TGG 0.492083 2_3:+56135633 None:intergenic
TGCTGCTTGGGCACTATACA+AGG 0.493125 2_3:-56136179 Msa0300670:CDS
AACCATCTCAACCAAGTCAA+TGG 0.493299 2_3:+56135452 None:intergenic
TTCAGGATATGTACAATCAA+TGG 0.494159 2_3:-56135491 Msa0300670:CDS
AGCTATCAGCAGAGTATGAA+GGG 0.496822 2_3:-56138820 Msa0300670:CDS
AGTGGAAAGCGTCCTCTCTT+CGG 0.497484 2_3:-56136532 Msa0300670:CDS
ACACATCCCTTGTAACTTCA+GGG 0.499346 2_3:+56137459 None:intergenic
CTTTGCTGCAAAAGCATGGA+AGG 0.500526 2_3:-56138463 Msa0300670:intron
ACTGAGTAGGATGAGCAGTT+AGG 0.501621 2_3:+56138498 None:intergenic
CAGAGTATGAAGGGGAGCAT+AGG 0.503409 2_3:-56138811 Msa0300670:CDS
TTTCATTTACCAGTTTGGCT+TGG 0.503901 2_3:-56135570 Msa0300670:CDS
GGTGGGACGGTTGGAAGAGG+TGG 0.504809 2_3:-56136091 Msa0300670:CDS
CAGAGGAACGCAGGCAGGAA+TGG 0.504858 2_3:-56136570 Msa0300670:CDS
ACACGATAAGGTTCGTTTGG+AGG 0.506679 2_3:+56137009 None:intergenic
TTATACAAATACATATATGA+TGG 0.507403 2_3:+56134461 None:intergenic
GGTCACAAGGATATTCTTGA+AGG 0.510569 2_3:-56134759 Msa0300670:CDS
ATTCGTCCATATTCTAACTC+TGG 0.510849 2_3:+56135687 None:intergenic
AACCAAGAGCTTTCTCCTCA+AGG 0.513871 2_3:-56135328 Msa0300670:intron
CTCTCTAGTTCCGTGATCAA+AGG 0.516301 2_3:-56139763 Msa0300670:five_prime_UTR
GGATAACAGGAGCATTATAT+GGG 0.519923 2_3:+56137669 None:intergenic
CACGGCCGAGGTGGGACGGT+TGG 0.520028 2_3:-56136100 Msa0300670:CDS
ATGGTCAGAGGAACGCAGGC+AGG 0.520864 2_3:-56136575 Msa0300670:CDS
GTAACTTCAGGGGTCACCCT+AGG 0.521142 2_3:+56137470 None:intergenic
CCTCCAAGAATGACACGATA+AGG 0.522482 2_3:+56136997 None:intergenic
AAATTGCCAATCCAAATCTC+AGG 0.522515 2_3:+56134403 None:intergenic
GGGTGACCCCTGAAGTTACA+AGG 0.524447 2_3:-56137466 Msa0300670:CDS
GCAGTACAATCCTATTAACT+TGG 0.524554 2_3:-56139666 Msa0300670:five_prime_UTR
TTTGTACTTCTCTCAGATAG+AGG 0.526417 2_3:-56137408 Msa0300670:CDS
AACCTTCACAAATGTTGAGC+AGG 0.527861 2_3:-56136893 Msa0300670:intron
GACATTCTTCAAGATTTGCA+TGG 0.529035 2_3:-56139357 Msa0300670:CDS
ATACTATTCACGGCTCACTT+CGG 0.530662 2_3:-56136030 Msa0300670:CDS
ACAATGTTCCACGGCCGAGG+TGG 0.531451 2_3:-56136109 Msa0300670:CDS
CTAACTAACGCCTTTGATCA+CGG 0.533097 2_3:+56139753 None:intergenic
CTCTCAACGGCTGTTTGACA+TGG 0.535077 2_3:+56136356 None:intergenic
AGATTGGATCTTACCGAGAA+TGG 0.535671 2_3:-56136594 Msa0300670:CDS
CTCGGTAAGATCCAATCTCC+AGG 0.538115 2_3:+56136599 None:intergenic
TGCTATATTATCACAGCCAC+CGG 0.539753 2_3:-56136053 Msa0300670:CDS
GAGCTATCAGCAGAGTATGA+AGG 0.540932 2_3:-56138821 Msa0300670:CDS
TGAACTCAAGAAGACTCCTC+TGG 0.541474 2_3:-56138561 Msa0300670:CDS
TGCCTGCCTGAGATTTGGAT+TGG 0.544173 2_3:-56134409 Msa0300670:three_prime_UTR
GATAGAGGATCTCATGTTCG+AGG 0.545851 2_3:-56137393 Msa0300670:intron
CTGTGTCTCCAAAACCGGAA+TGG 0.549619 2_3:-56135898 Msa0300670:CDS
CAACAGCAAGCACATCAGAC+GGG 0.551140 2_3:+56136398 None:intergenic
CAGCCACCGGATACTATTCA+CGG 0.551556 2_3:-56136040 Msa0300670:CDS
TTAATAGGATTGTACTGCAC+GGG 0.551841 2_3:+56139671 None:intergenic
CAGAGAAATTGGAGGAACTT+GGG 0.554710 2_3:-56138787 Msa0300670:CDS
CGATCTTTGCTGCAAAAGCA+TGG 0.556290 2_3:-56138467 Msa0300670:CDS
ACAATGAAGGGTATAGCTGC+TGG 0.557262 2_3:-56134510 Msa0300670:CDS
ATATACTCCTTTGACAAATG+TGG 0.557333 2_3:+56134618 None:intergenic
TGGTGCCTATATCATCTCAA+TGG 0.560831 2_3:-56136428 Msa0300670:CDS
ACCTAGGTGGAAAATCTAGT+TGG 0.561986 2_3:+56139641 None:intergenic
GTTCCACGGCCGAGGTGGGA+CGG 0.562255 2_3:-56136104 Msa0300670:CDS
TCCCTAGGTTGCTGGTCACA+AGG 0.562522 2_3:-56134772 Msa0300670:intron
GTGTCATTCTTGGAGGTGTG+AGG 0.563552 2_3:-56136990 Msa0300670:CDS
GACAGCCATCTCATCCAAAA+GGG 0.564412 2_3:+56135871 None:intergenic
AATTTGCCAAATTAAGCATG+TGG 0.564728 2_3:+56138708 None:intergenic
CTGACAATGTTCCACGGCCG+AGG 0.565880 2_3:-56136112 Msa0300670:CDS
AGTGAGCCGTGAATAGTATC+CGG 0.570212 2_3:+56136034 None:intergenic
GAAGCTTACTCGATTTCTTG+CGG 0.570354 2_3:-56136714 Msa0300670:CDS
TTCTGATGATGATAAACTTG+TGG 0.572112 2_3:-56139412 Msa0300670:CDS
TCAATGGTAACCCTAAAGAA+AGG 0.572555 2_3:+56135468 None:intergenic
CAATTCTCTTCTTGGATGGG+AGG 0.575854 2_3:-56137647 Msa0300670:CDS
TCAGATTCAGGAAAAGATGC+AGG 0.576677 2_3:-56136211 Msa0300670:CDS
CGAAAATCCAAGGAATAGCT+CGG 0.577857 2_3:+56135610 None:intergenic
AGCTTCCATCTGCTATTGAT+CGG 0.579634 2_3:+56136731 None:intergenic
GTAGCCGTTGCTTTAAGTAA+GGG 0.580388 2_3:+56134733 None:intergenic
GGCACTATACAAGGCTCAAG+AGG 0.580831 2_3:-56136170 Msa0300670:CDS
TGCCAATCCAAATCTCAGGC+AGG 0.582056 2_3:+56134407 None:intergenic
GACCTGTAACACAGTTCAAG+AGG 0.584130 2_3:+56136772 None:intergenic
TGATGAGGCTTTACAAAGAG+AGG 0.584519 2_3:-56138021 Msa0300670:intron
TACCTGCTCAACATTTGTGA+AGG 0.585179 2_3:+56136891 None:intergenic
TGCTTTGGTAGTTGTCTATG+TGG 0.586126 2_3:-56137282 Msa0300670:intron
TGTCATTCTTGGAGGTGTGA+GGG 0.587488 2_3:-56136989 Msa0300670:CDS
TGTGTCCAAGCGAAAATCCA+AGG 0.590977 2_3:+56135600 None:intergenic
GGGAGATCATGGCCGAAGAG+AGG 0.592036 2_3:+56136520 None:intergenic
ATAGGCACCAAAGCTGTCTG+AGG 0.592123 2_3:+56136441 None:intergenic
ATTTGCCAAATTAAGCATGT+GGG 0.593218 2_3:+56138709 None:intergenic
TCAACAGCAAGCACATCAGA+CGG 0.594912 2_3:+56136397 None:intergenic
TATTGAACAATCGTTTGGAG+AGG 0.595426 2_3:-56135987 Msa0300670:CDS
TCACGAGACAATTTGGAAAG+GGG 0.597957 2_3:-56137753 Msa0300670:CDS
CAATGTTCCACGGCCGAGGT+GGG 0.599085 2_3:-56136108 Msa0300670:CDS
GATAATATAGCAAGATGAGT+AGG 0.600009 2_3:+56136064 None:intergenic
CCACAAGATGAAATGAGAGC+AGG 0.600554 2_3:-56137788 Msa0300670:CDS
GTGCATTACAGGCAATCCTA+GGG 0.600944 2_3:-56137486 Msa0300670:intron
TACAGGTCACTCTGTGCATG+TGG 0.601440 2_3:-56136757 Msa0300670:CDS
GATCGACGAATCGACTGAGT+AGG 0.604180 2_3:+56138485 None:intergenic
AACAGTGGGACAACTCTCAA+CGG 0.604239 2_3:+56136343 None:intergenic
TTCGCACTGATGAAATTCGA+AGG 0.605273 2_3:-56137823 Msa0300670:CDS
CGAAAATCTCGTGACAACCT+AGG 0.605372 2_3:+56139625 None:intergenic
GGAACTCATTAACGTAGCAA+AGG 0.606640 2_3:-56136149 Msa0300670:CDS
GACACAGCTCTGAAGAACAT+TGG 0.606994 2_3:-56137707 Msa0300670:CDS
CAGATTACCATGTGAAGATG+AGG 0.608496 2_3:-56134641 Msa0300670:CDS
GAGACCCTTACTTAAAGCAA+CGG 0.608799 2_3:-56134737 Msa0300670:CDS
AGGGAAGTTCTGAAATGACA+TGG 0.609842 2_3:+56136461 None:intergenic
CTCTTCCAACCGTCCCACCT+CGG 0.611745 2_3:+56136095 None:intergenic
GGTGACCGATCAATAGCAGA+TGG 0.613687 2_3:-56136736 Msa0300670:CDS
GATGAGGCCACATTTGTCAA+AGG 0.613746 2_3:-56134625 Msa0300670:CDS
GATGGCTGTCATTGCAACAA+AGG 0.614061 2_3:-56135858 Msa0300670:CDS
ATGGAAAGTTTCCAAAACAT+CGG 0.614492 2_3:+56136480 None:intergenic
GGACGCAATTACAAAACACC+TGG 0.620285 2_3:-56136617 Msa0300670:CDS
GAATATGGACGAATGAACAT+TGG 0.622611 2_3:-56135678 Msa0300670:CDS
TGAGTATGCTCCTGGTCTTG+AGG 0.624710 2_3:-56134547 Msa0300670:CDS
GTGTCTACTAGCTCGAATGA+TGG 0.626956 2_3:-56137438 Msa0300670:CDS
TTTCACGAGACAATTTGGAA+AGG 0.627919 2_3:-56137755 Msa0300670:CDS
CGTATAAGGAAGCGATCCCG+GGG 0.630361 2_3:+56135415 None:intergenic
AAAGCATCAAATACTTCCAG+AGG 0.632277 2_3:+56138545 None:intergenic
GCTGAAGTGTTCTAAAGCAT+AGG 0.636742 2_3:+56135960 None:intergenic
CGGAAGTATTCAACAAAACG+AGG 0.638889 2_3:+56135809 None:intergenic
TGATAAGCAAGAACTTGATG+AGG 0.638900 2_3:-56138036 Msa0300670:CDS
GCATAGGCCAGAGAAATTGG+AGG 0.639696 2_3:-56138795 Msa0300670:CDS
GAGAATGGTCAGAGGAACGC+AGG 0.647467 2_3:-56136579 Msa0300670:CDS
CACATCCCTTGTAACTTCAG+GGG 0.647779 2_3:+56137460 None:intergenic
GTTAATAGGATTGTACTGCA+CGG 0.648858 2_3:+56139670 None:intergenic
TAGGCACCAAAGCTGTCTGA+GGG 0.649412 2_3:+56136442 None:intergenic
TCAAAACGAAAGCCAAGTGG+AGG 0.650753 2_3:-56135645 Msa0300670:CDS
AACAGCAAGCACATCAGACG+GGG 0.656009 2_3:+56136399 None:intergenic
ACTGCTGCTACACTCGAGCA+CGG 0.656852 2_3:-56135932 Msa0300670:CDS
ATAAGGGTATCCTCAAGACC+AGG 0.658078 2_3:+56134537 None:intergenic
GCTGCTGGCATGCAAAACAC+TGG 0.660961 2_3:-56134495 Msa0300670:CDS
CCATCAAAACGAAAGCCAAG+TGG 0.669883 2_3:-56135648 Msa0300670:CDS
GGTGACCCCTGAAGTTACAA+GGG 0.670298 2_3:-56137465 Msa0300670:CDS
GCTATCAGCAGAGTATGAAG+GGG 0.686527 2_3:-56138819 Msa0300670:CDS
GAGCCGTGAATAGTATCCGG+TGG 0.686653 2_3:+56136037 None:intergenic
AAATCTCGTGACAACCTAGG+TGG 0.687708 2_3:+56139628 None:intergenic
GTTAAGCTGACAATGTTCCA+CGG 0.690620 2_3:-56136118 Msa0300670:CDS
TGGATGGGAGGAGATCGTGA+TGG 0.706606 2_3:-56137635 Msa0300670:intron
ACATCCGTCAAGAGTCAGAG+AGG 0.715570 2_3:-56136654 Msa0300670:CDS
AATGTGGCCTCATCTTCACA+TGG 0.715631 2_3:+56134634 None:intergenic
ATCTTACCGAGAATGGTCAG+AGG 0.718286 2_3:-56136587 Msa0300670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAATAAAAATTGAAGT+GGG + chr2_3:56134832-56134851 None:intergenic 10.0%
!!! TTTTTTAATAAAAATTGAAG+TGG + chr2_3:56134833-56134852 None:intergenic 10.0%
!!! TTTTCAATAAAAATTTAAGT+GGG + chr2_3:56135092-56135111 None:intergenic 10.0%
!!! GATAATATAATTTTCAAAAT+TGG - chr2_3:56135153-56135172 Msa0300670:intron 10.0%
!! ATATATGTATTTGTATAATT+TGG - chr2_3:56139625-56139644 Msa0300670:five_prime_UTR 10.0%
!!! TTTTAATAAAAATTGAAGTG+GGG + chr2_3:56134831-56134850 None:intergenic 15.0%
!!! AATATTTTTTCATAAGCATA+AGG + chr2_3:56135034-56135053 None:intergenic 15.0%
!!! GTATAATATTAACATTTTTC+TGG - chr2_3:56135063-56135082 Msa0300670:intron 15.0%
!!! CTTTTCAATAAAAATTTAAG+TGG + chr2_3:56135093-56135112 None:intergenic 15.0%
!! AATTTATACAGTACAATTTA+TGG - chr2_3:56135953-56135972 Msa0300670:CDS 15.0%
!! TTGATGAAAATTTATAATCA+CGG + chr2_3:56136736-56136755 None:intergenic 15.0%
!! GTTCAATTAATAATTCATAT+TGG - chr2_3:56136994-56137013 Msa0300670:CDS 15.0%
!! TTATACAAATACATATATGA+TGG + chr2_3:56139623-56139642 None:intergenic 15.0%
!!! TATAATAAAGAATTTGGTTT+TGG - chr2_3:56139729-56139748 Msa0300670:five_prime_UTR 15.0%
!!! AAAAAAATTCTTTTTGGTCT+TGG - chr2_3:56134853-56134872 Msa0300670:intron 20.0%
!!! TCAAATATCAACTATTTTCA+AGG + chr2_3:56135179-56135198 None:intergenic 20.0%
!! TAAGTTATGACAGAATATAA+TGG + chr2_3:56135649-56135668 None:intergenic 20.0%
!! AATCAATCATATATTAAGCA+AGG + chr2_3:56136099-56136118 None:intergenic 20.0%
!!! CACAATTTTTTCATCATTAT+TGG - chr2_3:56136923-56136942 Msa0300670:CDS 20.0%
!!! TTTTTTCATCATTATTGGAA+TGG - chr2_3:56136928-56136947 Msa0300670:CDS 20.0%
!!! TTTAAAATGTTGCAGAATTT+TGG - chr2_3:56137040-56137059 Msa0300670:intron 20.0%
!!! TTTTTTATCCTTGTAGTTTT+TGG - chr2_3:56137284-56137303 Msa0300670:intron 20.0%
!! TAAATGATTACAAAAATTGC+AGG + chr2_3:56138839-56138858 None:intergenic 20.0%
!!! CGAATGTTTTAAAAATGAAT+TGG - chr2_3:56138966-56138985 Msa0300670:intron 20.0%
!! CCTTCATAAATATAATATCA+AGG + chr2_3:56139156-56139175 None:intergenic 20.0%
!! CCTTGATATTATATTTATGA+AGG - chr2_3:56139153-56139172 Msa0300670:intron 20.0%
!! CAGTTTGATTAAACATTTAT+CGG + chr2_3:56139786-56139805 None:intergenic 20.0%
! TTCAATTCAGAGAGAAAATA+TGG - chr2_3:56134579-56134598 Msa0300670:CDS 25.0%
!!! TCATCATCAGAAACTTTTTT+TGG + chr2_3:56134661-56134680 None:intergenic 25.0%
!! CATAACAAAAAGTGTAAGAA+TGG + chr2_3:56134784-56134803 None:intergenic 25.0%
!! TATTGAAAAGAAACTGCTTT+TGG - chr2_3:56135103-56135122 Msa0300670:intron 25.0%
! ATATTTGATGTATGTACTTG+TGG - chr2_3:56135191-56135210 Msa0300670:intron 25.0%
! TTCAAATTGCATATAGAAGA+AGG - chr2_3:56135408-56135427 Msa0300670:CDS 25.0%
! AATAAGATGTTTATCCAAAC+AGG - chr2_3:56135884-56135903 Msa0300670:CDS 25.0%
!! CATTTATTGATTAAGCATCT+AGG + chr2_3:56135911-56135930 None:intergenic 25.0%
! AATAAATGTCCTGTAATTAC+AGG - chr2_3:56135923-56135942 Msa0300670:CDS 25.0%
! TTATAATGACCTGTAATTAC+AGG + chr2_3:56135935-56135954 None:intergenic 25.0%
! GAATACTTGCGAAAATATTA+CGG + chr2_3:56136532-56136551 None:intergenic 25.0%
! AGAGATGCAAAACATTATAT+CGG - chr2_3:56136876-56136895 Msa0300670:intron 25.0%
! GATGAAAAAATTGTGCAATT+TGG + chr2_3:56136918-56136937 None:intergenic 25.0%
! TTTCATTGATACTTACACAT+CGG + chr2_3:56138295-56138314 None:intergenic 25.0%
! TTATGAATGTTATGAAATGC+AGG - chr2_3:56138366-56138385 Msa0300670:intron 25.0%
! ATTTGTATACTTGTCACAAA+TGG - chr2_3:56138875-56138894 Msa0300670:intron 25.0%
! TCACAAATGGTTTAAAAGTT+AGG - chr2_3:56138888-56138907 Msa0300670:intron 25.0%
!!! CATTTTTAAAACATTCGATC+CGG + chr2_3:56138963-56138982 None:intergenic 25.0%
!!! ATTTCAGAATTCTGAAATCT+TGG + chr2_3:56139256-56139275 None:intergenic 25.0%
! ATTTTATTCATCAACGTGAG+TGG - chr2_3:56134556-56134575 Msa0300670:CDS 30.0%
TACTCGTAACATTGAAAAGA+TGG - chr2_3:56134603-56134622 Msa0300670:CDS 30.0%
! TTCTGATGATGATAAACTTG+TGG - chr2_3:56134669-56134688 Msa0300670:CDS 30.0%
ATAAAACCTTTAGCACACAA+AGG + chr2_3:56134957-56134976 None:intergenic 30.0%
!!! TAAGAGTTTTGGGAATTTGA+TGG - chr2_3:56135215-56135234 Msa0300670:intron 30.0%
! ATTTTCCCACATGCTTAATT+TGG - chr2_3:56135367-56135386 Msa0300670:CDS 30.0%
ATTTGCCAAATTAAGCATGT+GGG + chr2_3:56135375-56135394 None:intergenic 30.0%
AATTTGCCAAATTAAGCATG+TGG + chr2_3:56135376-56135395 None:intergenic 30.0%
! CATGCTTAATTTGGCAAATT+TGG - chr2_3:56135376-56135395 Msa0300670:CDS 30.0%
AGGATTAAGTTACTGAAGAA+AGG - chr2_3:56135428-56135447 Msa0300670:CDS 30.0%
TTCAATATCTGACTCAGTTA+TGG + chr2_3:56135477-56135496 None:intergenic 30.0%
GTCATAACTTAGTTGTGTTA+TGG - chr2_3:56135658-56135677 Msa0300670:CDS 30.0%
ATAACTTAGTTGTGTTATGG+TGG - chr2_3:56135661-56135680 Msa0300670:CDS 30.0%
GACAATAAATGCTACAACAA+TGG + chr2_3:56135688-56135707 None:intergenic 30.0%
TTGTAGCATTTATTGTCTAG+AGG - chr2_3:56135691-56135710 Msa0300670:CDS 30.0%
TAAACATTTGTGAGCCTATT+TGG - chr2_3:56135752-56135771 Msa0300670:intron 30.0%
AAACATTTGTGAGCCTATTT+GGG - chr2_3:56135753-56135772 Msa0300670:intron 30.0%
TTCTATAACTTCTCCCAAAT+AGG + chr2_3:56135769-56135788 None:intergenic 30.0%
TCTAACTACAACACTATACT+CGG + chr2_3:56136165-56136184 None:intergenic 30.0%
TGAATCTGTGTATGTACAAA+CGG + chr2_3:56136230-56136249 None:intergenic 30.0%
! TATTTTCGCAAGTATTCATG+TGG - chr2_3:56136535-56136554 Msa0300670:CDS 30.0%
TGCACATTAGACATATTGTA+AGG + chr2_3:56136580-56136599 None:intergenic 30.0%
ATATGTCTAATGTGCATTAC+AGG - chr2_3:56136584-56136603 Msa0300670:CDS 30.0%
AATATTTGCTTTGTCTGCTT+TGG - chr2_3:56136784-56136803 Msa0300670:CDS 30.0%
! TTGAACTCTAAAAAAGTCCA+CGG + chr2_3:56136980-56136999 None:intergenic 30.0%
AGTTCTCATTAGCTAATAAC+TGG + chr2_3:56137149-56137168 None:intergenic 30.0%
AATGATACCATTGCTTGTAT+TGG + chr2_3:56137232-56137251 None:intergenic 30.0%
! AGAAGAAATTTCCGATGTTT+TGG - chr2_3:56137590-56137609 Msa0300670:intron 30.0%
ATGGAAAGTTTCCAAAACAT+CGG + chr2_3:56137604-56137623 None:intergenic 30.0%
GATAATATAGCAAGATGAGT+AGG + chr2_3:56138020-56138039 None:intergenic 30.0%
GAAGTTATTGAACAATCGTT+TGG - chr2_3:56138089-56138108 Msa0300670:intron 30.0%
! TGAAGCATTTGAAGATTCTT+CGG + chr2_3:56138574-56138593 None:intergenic 30.0%
TTCAGGATATGTACAATCAA+TGG - chr2_3:56138590-56138609 Msa0300670:CDS 30.0%
AGCAAATAGAATTTACCTTG+AGG + chr2_3:56138771-56138790 None:intergenic 30.0%
AAATGGTTTAAAAGTTAGGC+CGG - chr2_3:56138892-56138911 Msa0300670:intron 30.0%
! TGAAGGACTAAAATTTTCTG+AGG - chr2_3:56139170-56139189 Msa0300670:intron 30.0%
GCAATAGGTTAACTGAAATT+TGG + chr2_3:56139219-56139238 None:intergenic 30.0%
AGTTAACCTATTGCTAGAAA+TGG - chr2_3:56139225-56139244 Msa0300670:intron 30.0%
TTGTGATATATGAGTCTCTA+AGG + chr2_3:56139375-56139394 None:intergenic 30.0%
ATATACTCCTTTGACAAATG+TGG + chr2_3:56139466-56139485 None:intergenic 30.0%
! ACATTTGTCAAAGGAGTATA+TGG - chr2_3:56139465-56139484 Msa0300670:CDS 30.0%
!!! TACCCTTATTTTGACAATGA+AGG - chr2_3:56139558-56139577 Msa0300670:five_prime_UTR 30.0%
!!! ACCCTTATTTTGACAATGAA+GGG - chr2_3:56139559-56139578 Msa0300670:five_prime_UTR 30.0%
ACCCTTCATTGTCAAAATAA+GGG + chr2_3:56139563-56139582 None:intergenic 30.0%
TACCCTTCATTGTCAAAATA+AGG + chr2_3:56139564-56139583 None:intergenic 30.0%
GCGTTAGTTAGTTACACAAT+TGG - chr2_3:56134340-56134359 Msa0300670:three_prime_UTR 35.0%
TTAATAGGATTGTACTGCAC+GGG + chr2_3:56134413-56134432 None:intergenic 35.0%
GTTAATAGGATTGTACTGCA+CGG + chr2_3:56134414-56134433 None:intergenic 35.0%
GCAGTACAATCCTATTAACT+TGG - chr2_3:56134415-56134434 Msa0300670:three_prime_UTR 35.0%
! CTAGTTGGTTCCAAGTTAAT+AGG + chr2_3:56134428-56134447 None:intergenic 35.0%
!! ATGATGCTTTGTTGTTGGAT+AGG - chr2_3:56134695-56134714 Msa0300670:CDS 35.0%
GACATTCTTCAAGATTTGCA+TGG - chr2_3:56134724-56134743 Msa0300670:CDS 35.0%
!! AAAGAAACTGCTTTTGGTCT+TGG - chr2_3:56135109-56135128 Msa0300670:intron 35.0%
! TACTTGTGGCTAAGAGTTTT+GGG - chr2_3:56135205-56135224 Msa0300670:intron 35.0%
! TTGGGAATTTGATGGTTGAT+AGG - chr2_3:56135223-56135242 Msa0300670:intron 35.0%
! AAAGCATCAAATACTTCCAG+AGG + chr2_3:56135539-56135558 None:intergenic 35.0%
! GAAGAGTCAAACTGTTGATT+TGG - chr2_3:56135559-56135578 Msa0300670:CDS 35.0%
! TTATTGTCTAGAGGCATGTT+TGG - chr2_3:56135700-56135719 Msa0300670:intron 35.0%
! TGTTTGGATCGACTTATTTG+AGG - chr2_3:56135716-56135735 Msa0300670:intron 35.0%
TCAAGTTCTTGCTTATCATC+TGG + chr2_3:56136043-56136062 None:intergenic 35.0%
TGATAAGCAAGAACTTGATG+AGG - chr2_3:56136045-56136064 Msa0300670:CDS 35.0%
!! TAGCCTTATGTTGTATGCTT+AGG - chr2_3:56136129-56136148 Msa0300670:CDS 35.0%
AAGCCTAAGCATACAACATA+AGG + chr2_3:56136135-56136154 None:intergenic 35.0%
TTTCACGAGACAATTTGGAA+AGG - chr2_3:56136326-56136345 Msa0300670:CDS 35.0%
TTCACGAGACAATTTGGAAA+GGG - chr2_3:56136327-56136346 Msa0300670:CDS 35.0%
!! GGATAACAGGAGCATTATAT+GGG + chr2_3:56136415-56136434 None:intergenic 35.0%
!! TGGATAACAGGAGCATTATA+TGG + chr2_3:56136416-56136435 None:intergenic 35.0%
CAAGAAGAGAATTGGATAAC+AGG + chr2_3:56136428-56136447 None:intergenic 35.0%
CTGTTATCCAATTCTCTTCT+TGG - chr2_3:56136426-56136445 Msa0300670:CDS 35.0%
TATCCAATTCTCTTCTTGGA+TGG - chr2_3:56136430-56136449 Msa0300670:CDS 35.0%
ATCCAATTCTCTTCTTGGAT+GGG - chr2_3:56136431-56136450 Msa0300670:CDS 35.0%
TTTGTACTTCTCTCAGATAG+AGG - chr2_3:56136673-56136692 Msa0300670:CDS 35.0%
! ATGTTTTGCATCTCTCTTTG+AGG + chr2_3:56136871-56136890 None:intergenic 35.0%
! TGAACTCTAAAAAAGTCCAC+GGG + chr2_3:56136979-56136998 None:intergenic 35.0%
ATTACAAAACACCTGGAGAT+TGG - chr2_3:56137471-56137490 Msa0300670:CDS 35.0%
CGGAAATTTCTTCTGTCTTA+GGG + chr2_3:56137584-56137603 None:intergenic 35.0%
TCGGAAATTTCTTCTGTCTT+AGG + chr2_3:56137585-56137604 None:intergenic 35.0%
TGTTGCCATTGAGATGATAT+AGG + chr2_3:56137661-56137680 None:intergenic 35.0%
! CTTCTTGCTTTCCATTGATT+CGG + chr2_3:56137836-56137855 None:intergenic 35.0%
GGAAAGCAAGAAGTTATGAT+AGG - chr2_3:56137843-56137862 Msa0300670:intron 35.0%
ATGATAGGATACTCAGATTC+AGG - chr2_3:56137858-56137877 Msa0300670:intron 35.0%
ATTAACGTAGCAAAGGAGTT+TGG - chr2_3:56137939-56137958 Msa0300670:intron 35.0%
TATTGAACAATCGTTTGGAG+AGG - chr2_3:56138094-56138113 Msa0300670:intron 35.0%
ATTCAACAAAACGAGGTTCT+TGG + chr2_3:56138268-56138287 None:intergenic 35.0%
ATTCGTCCATATTCTAACTC+TGG + chr2_3:56138397-56138416 None:intergenic 35.0%
GAATATGGACGAATGAACAT+TGG - chr2_3:56138403-56138422 Msa0300670:intron 35.0%
CAAGGTTTCATTTACCAGTT+TGG - chr2_3:56138506-56138525 Msa0300670:CDS 35.0%
TTTCATTTACCAGTTTGGCT+TGG - chr2_3:56138511-56138530 Msa0300670:CDS 35.0%
GAAGAATCTTCAAATGCTTC+AGG - chr2_3:56138573-56138592 Msa0300670:CDS 35.0%
ACAATCAATGGCCTTTCTTT+AGG - chr2_3:56138602-56138621 Msa0300670:CDS 35.0%
CAATCAATGGCCTTTCTTTA+GGG - chr2_3:56138603-56138622 Msa0300670:CDS 35.0%
TCAATGGTAACCCTAAAGAA+AGG + chr2_3:56138616-56138635 None:intergenic 35.0%
AACTAAGAGCTTGTCGTATA+AGG + chr2_3:56138683-56138702 None:intergenic 35.0%
CAACCTATTGAACCATGATT+GGG + chr2_3:56138938-56138957 None:intergenic 35.0%
TCAACCTATTGAACCATGAT+TGG + chr2_3:56138939-56138958 None:intergenic 35.0%
!! AAGATGTTGATAACTGACCA+CGG - chr2_3:56139038-56139057 Msa0300670:intron 35.0%
!! TTTTTAGAAGCAGACCACAT+CGG + chr2_3:56139120-56139139 None:intergenic 35.0%
! AATGAGCTCTTTTTATCCCT+AGG - chr2_3:56139294-56139313 Msa0300670:intron 35.0%
GTAGGCTTGTAAGACATTAA+GGG + chr2_3:56139398-56139417 None:intergenic 35.0%
TGTAGGCTTGTAAGACATTA+AGG + chr2_3:56139399-56139418 None:intergenic 35.0%
! ACGAATTTGCTTCAATGTGT+AGG + chr2_3:56139416-56139435 None:intergenic 35.0%
AAATTGCCAATCCAAATCTC+AGG + chr2_3:56139681-56139700 None:intergenic 35.0%
!! TGAGATTTGGATTGGCAATT+TGG - chr2_3:56139680-56139699 Msa0300670:five_prime_UTR 35.0%
CTAACTAACGCCTTTGATCA+CGG + chr2_3:56134331-56134350 None:intergenic 40.0%
! ACCAACTAGATTTTCCACCT+AGG - chr2_3:56134439-56134458 Msa0300670:three_prime_UTR 40.0%
ACCTAGGTGGAAAATCTAGT+TGG + chr2_3:56134443-56134462 None:intergenic 40.0%
TGATGCTCAGTTGAGACTAT+TGG - chr2_3:56134633-56134652 Msa0300670:CDS 40.0%
! GGAGTATGATGCTTTGTTGT+TGG - chr2_3:56134690-56134709 Msa0300670:CDS 40.0%
ATTGAGCCTTTGTGTGCTAA+AGG - chr2_3:56134948-56134967 Msa0300670:intron 40.0%
! GTACTTGTGGCTAAGAGTTT+TGG - chr2_3:56135204-56135223 Msa0300670:intron 40.0%
AGCTATCAGCAGAGTATGAA+GGG - chr2_3:56135261-56135280 Msa0300670:intron 40.0%
CAGAGAAATTGGAGGAACTT+GGG - chr2_3:56135294-56135313 Msa0300670:intron 40.0%
GAACTTGGGAATATGCTAAC+TGG - chr2_3:56135308-56135327 Msa0300670:intron 40.0%
TTAAGCATCTAGGTCCTGTT+TGG + chr2_3:56135901-56135920 None:intergenic 40.0%
TTGTCTTCATGTGCAGGATA+AGG - chr2_3:56135981-56136000 Msa0300670:CDS 40.0%
TGATGAGGCTTTACAAAGAG+AGG - chr2_3:56136060-56136079 Msa0300670:CDS 40.0%
! TTCGCACTGATGAAATTCGA+AGG - chr2_3:56136258-56136277 Msa0300670:CDS 40.0%
CTCATTTCATCTTGTGGTGT+AGG + chr2_3:56136290-56136309 None:intergenic 40.0%
! GCTACTTTCACGAGACAATT+TGG - chr2_3:56136321-56136340 Msa0300670:CDS 40.0%
TCACGAGACAATTTGGAAAG+GGG - chr2_3:56136328-56136347 Msa0300670:CDS 40.0%
ACACATCCCTTGTAACTTCA+GGG + chr2_3:56136625-56136644 None:intergenic 40.0%
TTCGAGGTAATTGAATGTGC+TGG - chr2_3:56136704-56136723 Msa0300670:CDS 40.0%
! TGCTTTGGTAGTTGTCTATG+TGG - chr2_3:56136799-56136818 Msa0300670:intron 40.0%
! CATCTCTCTTTGAGGATTCA+TGG + chr2_3:56136863-56136882 None:intergenic 40.0%
ATGACACGATAAGGTTCGTT+TGG + chr2_3:56137078-56137097 None:intergenic 40.0%
! GAACCTTATCGTGTCATTCT+TGG - chr2_3:56137081-56137100 Msa0300670:intron 40.0%
TTTGTGAAGGTTGTCTCTTC+AGG + chr2_3:56137180-56137199 None:intergenic 40.0%
AACCTTCACAAATGTTGAGC+AGG - chr2_3:56137188-56137207 Msa0300670:intron 40.0%
TACCTGCTCAACATTTGTGA+AGG + chr2_3:56137193-56137212 None:intergenic 40.0%
CAACAGTCCAATACAAGCAA+TGG - chr2_3:56137222-56137241 Msa0300670:CDS 40.0%
AGCAATGGTATCATTGCACA+TGG - chr2_3:56137237-56137256 Msa0300670:CDS 40.0%
AAGAGGCTCCAAAAACTACA+AGG + chr2_3:56137295-56137314 None:intergenic 40.0%
AGCTTCCATCTGCTATTGAT+CGG + chr2_3:56137353-56137372 None:intergenic 40.0%
GAAGCTTACTCGATTTCTTG+CGG - chr2_3:56137367-56137386 Msa0300670:intron 40.0%
TTGCGGCAAGTTTCTACATT+TGG - chr2_3:56137384-56137403 Msa0300670:intron 40.0%
CATTTGGACTTTCACTCGTA+AGG - chr2_3:56137400-56137419 Msa0300670:CDS 40.0%
AGATTGGATCTTACCGAGAA+TGG - chr2_3:56137487-56137506 Msa0300670:intron 40.0%
! TGGCTTTTATCTGAGCTTAG+TGG - chr2_3:56137531-56137550 Msa0300670:intron 40.0%
!! AGGGAAGTTCTGAAATGACA+TGG + chr2_3:56137623-56137642 None:intergenic 40.0%
TGGTGCCTATATCATCTCAA+TGG - chr2_3:56137653-56137672 Msa0300670:CDS 40.0%
! CAGCAAGCTTTTCAAACAGT+GGG + chr2_3:56137755-56137774 None:intergenic 40.0%
! TCAGCAAGCTTTTCAAACAG+TGG + chr2_3:56137756-56137775 None:intergenic 40.0%
! CGCGACTTTTCTCTATAGAT+TGG - chr2_3:56137802-56137821 Msa0300670:CDS 40.0%
TGGTACAGAAACCGAATCAA+TGG - chr2_3:56137822-56137841 Msa0300670:CDS 40.0%
TCAGATTCAGGAAAAGATGC+AGG - chr2_3:56137870-56137889 Msa0300670:intron 40.0%
GGAACTCATTAACGTAGCAA+AGG - chr2_3:56137932-56137951 Msa0300670:intron 40.0%
GTTAAGCTGACAATGTTCCA+CGG - chr2_3:56137963-56137982 Msa0300670:intron 40.0%
TGCTATATTATCACAGCCAC+CGG - chr2_3:56138028-56138047 Msa0300670:CDS 40.0%
ATACTATTCACGGCTCACTT+CGG - chr2_3:56138051-56138070 Msa0300670:CDS 40.0%
!! GCTGAAGTGTTCTAAAGCAT+AGG + chr2_3:56138124-56138143 None:intergenic 40.0%
!! CGGAAGTATTCAACAAAACG+AGG + chr2_3:56138275-56138294 None:intergenic 40.0%
GCAACACCAGAGTTAGAATA+TGG - chr2_3:56138388-56138407 Msa0300670:intron 40.0%
CGAAAATCCAAGGAATAGCT+CGG + chr2_3:56138474-56138493 None:intergenic 40.0%
! CTATTCCTTGGATTTTCGCT+TGG - chr2_3:56138476-56138495 Msa0300670:CDS 40.0%
! TTTTCGCTTGGACACAAACA+AGG - chr2_3:56138488-56138507 Msa0300670:CDS 40.0%
!!! TTACCAGTTTGGCTTGGTTT+TGG - chr2_3:56138517-56138536 Msa0300670:CDS 40.0%
!! CTTTAGGGTTACCATTGACT+TGG - chr2_3:56138618-56138637 Msa0300670:CDS 40.0%
!! TACCATTGACTTGGTTGAGA+TGG - chr2_3:56138627-56138646 Msa0300670:CDS 40.0%
AACCATCTCAACCAAGTCAA+TGG + chr2_3:56138632-56138651 None:intergenic 40.0%
!! TTGCTTTGAAACCTGCCATT+TGG - chr2_3:56138786-56138805 Msa0300670:CDS 40.0%
!! TGCTTTGAAACCTGCCATTT+GGG - chr2_3:56138787-56138806 Msa0300670:CDS 40.0%
TTTAACCTCTGCATCCCAAA+TGG + chr2_3:56138804-56138823 None:intergenic 40.0%
! CATGGTTCAATAGGTTGAAC+CGG - chr2_3:56138941-56138960 Msa0300670:intron 40.0%
! GAACTAGGTTGAACTGAAGT+TGG + chr2_3:56138997-56139016 None:intergenic 40.0%
AGATTGAACCTGATCGAACT+AGG + chr2_3:56139012-56139031 None:intergenic 40.0%
TAGTTCGATCAGGTTCAATC+TGG - chr2_3:56139011-56139030 Msa0300670:intron 40.0%
ACCTATTGCTAGAAATGGAG+TGG - chr2_3:56139230-56139249 Msa0300670:intron 40.0%
! TCTTTTTATCCCTAGGTTGC+TGG - chr2_3:56139301-56139320 Msa0300670:intron 40.0%
GGTCACAAGGATATTCTTGA+AGG - chr2_3:56139322-56139341 Msa0300670:intron 40.0%
GAGACCCTTACTTAAAGCAA+CGG - chr2_3:56139344-56139363 Msa0300670:CDS 40.0%
! GTAGCCGTTGCTTTAAGTAA+GGG + chr2_3:56139351-56139370 None:intergenic 40.0%
CTCATCTTCACATGGTAATC+TGG + chr2_3:56139442-56139461 None:intergenic 40.0%
CAGATTACCATGTGAAGATG+AGG - chr2_3:56139440-56139459 Msa0300670:CDS 40.0%
AGTTTAACAAGTTCTGCTGC+TGG + chr2_3:56139502-56139521 None:intergenic 40.0%
TATTATGCCTGCCTGAGATT+TGG - chr2_3:56139667-56139686 Msa0300670:five_prime_UTR 40.0%
! CTCTCTAGTTCCGTGATCAA+AGG - chr2_3:56134318-56134337 Msa0300670:three_prime_UTR 45.0%
AAATCTCGTGACAACCTAGG+TGG + chr2_3:56134456-56134475 None:intergenic 45.0%
CGAAAATCTCGTGACAACCT+AGG + chr2_3:56134459-56134478 None:intergenic 45.0%
GAGCTATCAGCAGAGTATGA+AGG - chr2_3:56135260-56135279 Msa0300670:intron 45.0%
GCTATCAGCAGAGTATGAAG+GGG - chr2_3:56135262-56135281 Msa0300670:intron 45.0%
CCAAGTTCCTCCAATTTCTC+TGG + chr2_3:56135296-56135315 None:intergenic 45.0%
CCAGAGAAATTGGAGGAACT+TGG - chr2_3:56135293-56135312 Msa0300670:intron 45.0%
!! ATGCTAACTGGTCTTGATGC+TGG - chr2_3:56135320-56135339 Msa0300670:intron 45.0%
TGAACTCAAGAAGACTCCTC+TGG - chr2_3:56135520-56135539 Msa0300670:CDS 45.0%
ACTGAGTAGGATGAGCAGTT+AGG + chr2_3:56135586-56135605 None:intergenic 45.0%
CGATCTTTGCTGCAAAAGCA+TGG - chr2_3:56135614-56135633 Msa0300670:CDS 45.0%
! CTTTGCTGCAAAAGCATGGA+AGG - chr2_3:56135618-56135637 Msa0300670:CDS 45.0%
GAATCGTTGTCTTCATGTGC+AGG - chr2_3:56135975-56135994 Msa0300670:CDS 45.0%
CCTGCTCTCATTTCATCTTG+TGG + chr2_3:56136296-56136315 None:intergenic 45.0%
CCACAAGATGAAATGAGAGC+AGG - chr2_3:56136293-56136312 Msa0300670:CDS 45.0%
! GGGTACCAAAGTTTTTGCGT+CGG - chr2_3:56136348-56136367 Msa0300670:CDS 45.0%
! GGTACCAAAGTTTTTGCGTC+GGG - chr2_3:56136349-56136368 Msa0300670:CDS 45.0%
TCAACCCGACGCAAAAACTT+TGG + chr2_3:56136356-56136375 None:intergenic 45.0%
!! GACACAGCTCTGAAGAACAT+TGG - chr2_3:56136374-56136393 Msa0300670:CDS 45.0%
CTCCCATCCAAGAAGAGAAT+TGG + chr2_3:56136436-56136455 None:intergenic 45.0%
CAATTCTCTTCTTGGATGGG+AGG - chr2_3:56136434-56136453 Msa0300670:CDS 45.0%
TGTGCATTACAGGCAATCCT+AGG - chr2_3:56136594-56136613 Msa0300670:CDS 45.0%
GTGCATTACAGGCAATCCTA+GGG - chr2_3:56136595-56136614 Msa0300670:CDS 45.0%
CACATCCCTTGTAACTTCAG+GGG + chr2_3:56136624-56136643 None:intergenic 45.0%
CACACATCCCTTGTAACTTC+AGG + chr2_3:56136626-56136645 None:intergenic 45.0%
GTGTCTACTAGCTCGAATGA+TGG - chr2_3:56136643-56136662 Msa0300670:CDS 45.0%
GATAGAGGATCTCATGTTCG+AGG - chr2_3:56136688-56136707 Msa0300670:CDS 45.0%
CAATGACGAGCTTCGTGTTA+GGG - chr2_3:56136827-56136846 Msa0300670:intron 45.0%
TACTGTACTATCTGTACCCG+TGG - chr2_3:56136960-56136979 Msa0300670:CDS 45.0%
ACACGATAAGGTTCGTTTGG+AGG + chr2_3:56137075-56137094 None:intergenic 45.0%
CCTCCAAGAATGACACGATA+AGG + chr2_3:56137087-56137106 None:intergenic 45.0%
! CCTTATCGTGTCATTCTTGG+AGG - chr2_3:56137084-56137103 Msa0300670:intron 45.0%
! TGTCATTCTTGGAGGTGTGA+GGG - chr2_3:56137092-56137111 Msa0300670:intron 45.0%
GCTTGTATTGGACTGTTGTG+AGG + chr2_3:56137220-56137239 None:intergenic 45.0%
AGCCTCTTGAACTGTGTTAC+AGG - chr2_3:56137307-56137326 Msa0300670:intron 45.0%
GACCTGTAACACAGTTCAAG+AGG + chr2_3:56137312-56137331 None:intergenic 45.0%
GGACGCAATTACAAAACACC+TGG - chr2_3:56137464-56137483 Msa0300670:CDS 45.0%
ATCTTACCGAGAATGGTCAG+AGG - chr2_3:56137494-56137513 Msa0300670:intron 45.0%
CTTCTGTCTTAGGGAGATCA+TGG + chr2_3:56137575-56137594 None:intergenic 45.0%
TCAACAGCAAGCACATCAGA+CGG + chr2_3:56137687-56137706 None:intergenic 45.0%
AACAGTGGGACAACTCTCAA+CGG + chr2_3:56137741-56137760 None:intergenic 45.0%
AGTGAGCCGTGAATAGTATC+CGG + chr2_3:56138050-56138069 None:intergenic 45.0%
TACTATTCACGGCTCACTTC+GGG - chr2_3:56138052-56138071 Msa0300670:CDS 45.0%
TCACTTCGGGTAACAGTTCA+AGG - chr2_3:56138065-56138084 Msa0300670:CDS 45.0%
GACAGCCATCTCATCCAAAA+GGG + chr2_3:56138213-56138232 None:intergenic 45.0%
TGACAGCCATCTCATCCAAA+AGG + chr2_3:56138214-56138233 None:intergenic 45.0%
GATGGCTGTCATTGCAACAA+AGG - chr2_3:56138223-56138242 Msa0300670:intron 45.0%
!! CCACTTGGCTTTCGTTTTGA+TGG + chr2_3:56138436-56138455 None:intergenic 45.0%
CCATCAAAACGAAAGCCAAG+TGG - chr2_3:56138433-56138452 Msa0300670:intron 45.0%
TCAAAACGAAAGCCAAGTGG+AGG - chr2_3:56138436-56138455 Msa0300670:intron 45.0%
AGCGATTCAATTCCTCCACT+TGG + chr2_3:56138451-56138470 None:intergenic 45.0%
TGTGTCCAAGCGAAAATCCA+AGG + chr2_3:56138484-56138503 None:intergenic 45.0%
TCTCCAAAACCAAGCCAAAC+TGG + chr2_3:56138523-56138542 None:intergenic 45.0%
! GTTGAGATGGTTTTCGCCAA+GGG - chr2_3:56138640-56138659 Msa0300670:CDS 45.0%
ACACAAGAGCTGTGTCCATT+TGG - chr2_3:56138703-56138722 Msa0300670:CDS 45.0%
AACCAAGAGCTTTCTCCTCA+AGG - chr2_3:56138753-56138772 Msa0300670:CDS 45.0%
TACCTTGAGGAGAAAGCTCT+TGG + chr2_3:56138758-56138777 None:intergenic 45.0%
! GGTCTCACTAGTTTGATCTC+CGG + chr2_3:56138914-56138933 None:intergenic 45.0%
CCTATTGAACCATGATTGGG+AGG + chr2_3:56138935-56138954 None:intergenic 45.0%
CCTCCCAATCATGGTTCAAT+AGG - chr2_3:56138932-56138951 Msa0300670:intron 45.0%
CAGTTCAACCTAGTTCGATC+AGG - chr2_3:56139001-56139020 Msa0300670:intron 45.0%
ACCACGGTTGAACAAACTAG+TGG - chr2_3:56139054-56139073 Msa0300670:intron 45.0%
!! TCCACTAGTTTGTTCAACCG+TGG + chr2_3:56139058-56139077 None:intergenic 45.0%
! GGTTGAACAAACTAGTGGAC+TGG - chr2_3:56139059-56139078 Msa0300670:intron 45.0%
CTGGGTCAAACAGTTGTATC+GGG + chr2_3:56139091-56139110 None:intergenic 45.0%
GCTGGGTCAAACAGTTGTAT+CGG + chr2_3:56139092-56139111 None:intergenic 45.0%
!! GCCACTCCATTTCTAGCAAT+AGG + chr2_3:56139234-56139253 None:intergenic 45.0%
! CGTAGCCGTTGCTTTAAGTA+AGG + chr2_3:56139352-56139371 None:intergenic 45.0%
AATGTGGCCTCATCTTCACA+TGG + chr2_3:56139450-56139469 None:intergenic 45.0%
GATGAGGCCACATTTGTCAA+AGG - chr2_3:56139456-56139475 Msa0300670:CDS 45.0%
!! CCAGGAGCATACTCACTTTT+TGG + chr2_3:56139529-56139548 None:intergenic 45.0%
CCAAAAAGTGAGTATGCTCC+TGG - chr2_3:56139526-56139545 Msa0300670:five_prime_UTR 45.0%
!! ATAAGGGTATCCTCAAGACC+AGG + chr2_3:56139547-56139566 None:intergenic 45.0%
! ACAATGAAGGGTATAGCTGC+TGG - chr2_3:56139571-56139590 Msa0300670:five_prime_UTR 45.0%
!!! AAAAAAAAAAAAATTCTTTT+TGG - chr2_3:56134847-56134866 Msa0300670:intron 5.0%
!! ATATTATATAATAAAGAATT+TGG - chr2_3:56139723-56139742 Msa0300670:five_prime_UTR 5.0%
! CAGAGTATGAAGGGGAGCAT+AGG - chr2_3:56135270-56135289 Msa0300670:intron 50.0%
GGAGCATAGGCCAGAGAAAT+TGG - chr2_3:56135283-56135302 Msa0300670:intron 50.0%
GCATAGGCCAGAGAAATTGG+AGG - chr2_3:56135286-56135305 Msa0300670:intron 50.0%
GATCGACGAATCGACTGAGT+AGG + chr2_3:56135599-56135618 None:intergenic 50.0%
GGTGACCCCTGAAGTTACAA+GGG - chr2_3:56136616-56136635 Msa0300670:CDS 50.0%
GCAATGACGAGCTTCGTGTT+AGG - chr2_3:56136826-56136845 Msa0300670:intron 50.0%
! GTGTCATTCTTGGAGGTGTG+AGG - chr2_3:56137091-56137110 Msa0300670:intron 50.0%
TACAGGTCACTCTGTGCATG+TGG - chr2_3:56137324-56137343 Msa0300670:intron 50.0%
GGTGACCGATCAATAGCAGA+TGG - chr2_3:56137345-56137364 Msa0300670:intron 50.0%
ACATCCGTCAAGAGTCAGAG+AGG - chr2_3:56137427-56137446 Msa0300670:CDS 50.0%
TGTGCCTCTCTGACTCTTGA+CGG + chr2_3:56137434-56137453 None:intergenic 50.0%
! AGAGAGGCACACAGACGTTA+TGG - chr2_3:56137443-56137462 Msa0300670:CDS 50.0%
CTCGGTAAGATCCAATCTCC+AGG + chr2_3:56137485-56137504 None:intergenic 50.0%
TGCGTTCCTCTGACCATTCT+CGG + chr2_3:56137503-56137522 None:intergenic 50.0%
!! AGTGGAAAGCGTCCTCTCTT+CGG - chr2_3:56137549-56137568 Msa0300670:intron 50.0%
GAACTTCCCTCAGACAGCTT+TGG - chr2_3:56137633-56137652 Msa0300670:intron 50.0%
TAGGCACCAAAGCTGTCTGA+GGG + chr2_3:56137642-56137661 None:intergenic 50.0%
ATAGGCACCAAAGCTGTCTG+AGG + chr2_3:56137643-56137662 None:intergenic 50.0%
AACAGCAAGCACATCAGACG+GGG + chr2_3:56137685-56137704 None:intergenic 50.0%
CAACAGCAAGCACATCAGAC+GGG + chr2_3:56137686-56137705 None:intergenic 50.0%
CTCTCAACGGCTGTTTGACA+TGG + chr2_3:56137728-56137747 None:intergenic 50.0%
! AGGTCGTCTATCTGCTGCTT+GGG - chr2_3:56137890-56137909 Msa0300670:intron 50.0%
! TGCTGCTTGGGCACTATACA+AGG - chr2_3:56137902-56137921 Msa0300670:intron 50.0%
GGCACTATACAAGGCTCAAG+AGG - chr2_3:56137911-56137930 Msa0300670:intron 50.0%
CAGCCACCGGATACTATTCA+CGG - chr2_3:56138041-56138060 Msa0300670:CDS 50.0%
TCCTCCTGTGTCTCCAAAAC+CGG - chr2_3:56138178-56138197 Msa0300670:intron 50.0%
!!! CATTCCGGTTTTGGAGACAC+AGG + chr2_3:56138185-56138204 None:intergenic 50.0%
CTGTGTCTCCAAAACCGGAA+TGG - chr2_3:56138183-56138202 Msa0300670:intron 50.0%
AATCGCTCCGAGCTATTCCT+TGG - chr2_3:56138464-56138483 Msa0300670:CDS 50.0%
! GGTTGAGATGGTTTTCGCCA+AGG - chr2_3:56138639-56138658 Msa0300670:CDS 50.0%
TCGTATAAGGAAGCGATCCC+GGG + chr2_3:56138670-56138689 None:intergenic 50.0%
GTCGTATAAGGAAGCGATCC+CGG + chr2_3:56138671-56138690 None:intergenic 50.0%
GATCTCAGACGCTCACCAAA+TGG + chr2_3:56138721-56138740 None:intergenic 50.0%
CTAGTGAGACCTCCCAATCA+TGG - chr2_3:56138923-56138942 Msa0300670:intron 50.0%
TCCTTGTGACCAGCAACCTA+GGG + chr2_3:56139313-56139332 None:intergenic 50.0%
ATCCTTGTGACCAGCAACCT+AGG + chr2_3:56139314-56139333 None:intergenic 50.0%
!! TGAGTATGCTCCTGGTCTTG+AGG - chr2_3:56139534-56139553 Msa0300670:five_prime_UTR 50.0%
TGCCTGCCTGAGATTTGGAT+TGG - chr2_3:56139672-56139691 Msa0300670:five_prime_UTR 50.0%
TGCCAATCCAAATCTCAGGC+AGG + chr2_3:56139677-56139696 None:intergenic 50.0%
TGGATGGGAGGAGATCGTGA+TGG - chr2_3:56136446-56136465 Msa0300670:CDS 55.0%
GTAACTTCAGGGGTCACCCT+AGG + chr2_3:56136614-56136633 None:intergenic 55.0%
GGGTGACCCCTGAAGTTACA+AGG - chr2_3:56136615-56136634 Msa0300670:CDS 55.0%
GAGAATGGTCAGAGGAACGC+AGG - chr2_3:56137502-56137521 Msa0300670:intron 55.0%
AAAAGTCGCGCTACAGCAGC+AGG + chr2_3:56137792-56137811 None:intergenic 55.0%
CAGGTCGTCTATCTGCTGCT+TGG - chr2_3:56137889-56137908 Msa0300670:intron 55.0%
GAGCCGTGAATAGTATCCGG+TGG + chr2_3:56138047-56138066 None:intergenic 55.0%
ACTGCTGCTACACTCGAGCA+CGG - chr2_3:56138149-56138168 Msa0300670:intron 55.0%
!!! TCCGGTTTTGGAGACACAGG+AGG + chr2_3:56138182-56138201 None:intergenic 55.0%
! TCCAAAAGGGCACGCCATTC+CGG + chr2_3:56138200-56138219 None:intergenic 55.0%
! GCGTGCCCTTTTGGATGAGA+TGG - chr2_3:56138205-56138224 Msa0300670:intron 55.0%
CGTATAAGGAAGCGATCCCG+GGG + chr2_3:56138669-56138688 None:intergenic 55.0%
! ACCTGCCATTTGGGATGCAG+AGG - chr2_3:56138796-56138815 Msa0300670:CDS 55.0%
ACCTCTGCATCCCAAATGGC+AGG + chr2_3:56138800-56138819 None:intergenic 55.0%
!! AGACCACATCGGCTTCAGCT+GGG + chr2_3:56139109-56139128 None:intergenic 55.0%
TCCCTAGGTTGCTGGTCACA+AGG - chr2_3:56139309-56139328 Msa0300670:intron 55.0%
GCTGCTGGCATGCAAAACAC+TGG - chr2_3:56139586-56139605 Msa0300670:five_prime_UTR 55.0%
ATGGTCAGAGGAACGCAGGC+AGG - chr2_3:56137506-56137525 Msa0300670:intron 60.0%
CAGAGGAACGCAGGCAGGAA+TGG - chr2_3:56137511-56137530 Msa0300670:intron 60.0%
GGGAGATCATGGCCGAAGAG+AGG + chr2_3:56137564-56137583 None:intergenic 60.0%
CTGACAATGTTCCACGGCCG+AGG - chr2_3:56137969-56137988 Msa0300670:intron 60.0%
ACAATGTTCCACGGCCGAGG+TGG - chr2_3:56137972-56137991 Msa0300670:intron 60.0%
CAATGTTCCACGGCCGAGGT+GGG - chr2_3:56137973-56137992 Msa0300670:intron 60.0%
CTCTTCCAACCGTCCCACCT+CGG + chr2_3:56137989-56138008 None:intergenic 60.0%
! AGGGCACGCCATTCCGGTTT+TGG + chr2_3:56138194-56138213 None:intergenic 60.0%
! ACCGGAATGGCGTGCCCTTT+TGG - chr2_3:56138196-56138215 Msa0300670:intron 60.0%
! GTTTTCGCCAAGGGAGACCC+CGG - chr2_3:56138649-56138668 Msa0300670:CDS 60.0%
! TTTTCGCCAAGGGAGACCCC+GGG - chr2_3:56138650-56138669 Msa0300670:CDS 60.0%
TGACCCAGCTGAAGCCGATG+TGG - chr2_3:56139103-56139122 Msa0300670:intron 60.0%
!! CAGACCACATCGGCTTCAGC+TGG + chr2_3:56139110-56139129 None:intergenic 60.0%
CGAGGTGGGACGGTTGGAAG+AGG - chr2_3:56137987-56138006 Msa0300670:intron 65.0%
GGTGGGACGGTTGGAAGAGG+TGG - chr2_3:56137990-56138009 Msa0300670:intron 65.0%
GGGACGGTTGGAAGAGGTGG+TGG - chr2_3:56137993-56138012 Msa0300670:intron 65.0%
GTTCCACGGCCGAGGTGGGA+CGG - chr2_3:56137977-56137996 Msa0300670:intron 70.0%
AGCGATCCCGGGGTCTCCCT+TGG + chr2_3:56138659-56138678 None:intergenic 70.0%
CAACCGTCCCACCTCGGCCG+TGG + chr2_3:56137983-56138002 None:intergenic 75.0%
CACGGCCGAGGTGGGACGGT+TGG - chr2_3:56137981-56138000 Msa0300670:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 56134286 56139817 56134286 ID=Msa0300670;Name=Msa0300670
chr2_3 mRNA 56134286 56139817 56134286 ID=Msa0300670-mRNA-1;Parent=Msa0300670;Name=Msa0300670-mRNA-1;_AED=0.09;_eAED=0.09;_QI=312|1|1|1|1|1|10|205|966
chr2_3 exon 56134286 56134787 56134286 ID=Msa0300670-mRNA-1:exon:17968;Parent=Msa0300670-mRNA-1
chr2_3 exon 56135329 56135715 56135329 ID=Msa0300670-mRNA-1:exon:17967;Parent=Msa0300670-mRNA-1
chr2_3 exon 56135805 56136803 56135805 ID=Msa0300670-mRNA-1:exon:17966;Parent=Msa0300670-mRNA-1
chr2_3 exon 56136894 56137048 56136894 ID=Msa0300670-mRNA-1:exon:17965;Parent=Msa0300670-mRNA-1
chr2_3 exon 56137206 56137293 56137206 ID=Msa0300670-mRNA-1:exon:17964;Parent=Msa0300670-mRNA-1
chr2_3 exon 56137394 56137497 56137394 ID=Msa0300670-mRNA-1:exon:17963;Parent=Msa0300670-mRNA-1
chr2_3 exon 56137636 56137858 56137636 ID=Msa0300670-mRNA-1:exon:17962;Parent=Msa0300670-mRNA-1
chr2_3 exon 56138022 56138106 56138022 ID=Msa0300670-mRNA-1:exon:17961;Parent=Msa0300670-mRNA-1
chr2_3 exon 56138464 56138858 56138464 ID=Msa0300670-mRNA-1:exon:17960;Parent=Msa0300670-mRNA-1
chr2_3 exon 56139338 56139817 56139338 ID=Msa0300670-mRNA-1:exon:17959;Parent=Msa0300670-mRNA-1
chr2_3 five_prime_UTR 56139506 56139817 56139506 ID=Msa0300670-mRNA-1:five_prime_utr;Parent=Msa0300670-mRNA-1
chr2_3 CDS 56139338 56139505 56139338 ID=Msa0300670-mRNA-1:cds;Parent=Msa0300670-mRNA-1
chr2_3 CDS 56138464 56138858 56138464 ID=Msa0300670-mRNA-1:cds;Parent=Msa0300670-mRNA-1
chr2_3 CDS 56138022 56138106 56138022 ID=Msa0300670-mRNA-1:cds;Parent=Msa0300670-mRNA-1
chr2_3 CDS 56137636 56137858 56137636 ID=Msa0300670-mRNA-1:cds;Parent=Msa0300670-mRNA-1
chr2_3 CDS 56137394 56137497 56137394 ID=Msa0300670-mRNA-1:cds;Parent=Msa0300670-mRNA-1
chr2_3 CDS 56137206 56137293 56137206 ID=Msa0300670-mRNA-1:cds;Parent=Msa0300670-mRNA-1
chr2_3 CDS 56136894 56137048 56136894 ID=Msa0300670-mRNA-1:cds;Parent=Msa0300670-mRNA-1
chr2_3 CDS 56135805 56136803 56135805 ID=Msa0300670-mRNA-1:cds;Parent=Msa0300670-mRNA-1
chr2_3 CDS 56135329 56135715 56135329 ID=Msa0300670-mRNA-1:cds;Parent=Msa0300670-mRNA-1
chr2_3 CDS 56134491 56134787 56134491 ID=Msa0300670-mRNA-1:cds;Parent=Msa0300670-mRNA-1
chr2_3 three_prime_UTR 56134286 56134490 56134286 ID=Msa0300670-mRNA-1:three_prime_utr;Parent=Msa0300670-mRNA-1
Gene Sequence

>Msa0300670

ATGGCTACTCGTAACATTGAAAAGATGGCTTCAATTGATGCTCAGTTGAGACTATTGGCACCAAAAAAAGTTTCTGATGATGATAAACTTGTGGAGTATGATGCTTTGTTGTTGGATAGGTTTCTTGACATTCTTCAAGATTTGCATGGAGAAGATATCAGACAAACTGTTCAAGATTGTTATGAGCTATCAGCAGAGTATGAAGGGGAGCATAGGCCAGAGAAATTGGAGGAACTTGGGAATATGCTAACTGGTCTTGATGCTGGAGATTCTATTGTTATAGCTAAATCATTTTCCCACATGCTTAATTTGGCAAATTTGGCTGAAGAAGTTCAAATTGCATATAGAAGAAGGATTAAGTTACTGAAGAAAGGTGATTTTGCTGATGAAAATTCTGCCATAACTGAGTCAGATATTGAAGAGACATTCAAGAAGCTTGTGACTGAACTCAAGAAGACTCCTCTGGAAGTATTTGATGCTTTGAAGAGTCAAACTGTTGATTTGGTCCTAACTGCTCATCCTACTCAGTCGATTCGTCGATCTTTGCTGCAAAAGCATGGAAGGATAAGGAATAACTTAACACAGTTGTATGCTAAAGACATAACACCAGATGATAAGCAAGAACTTGATGAGGCTTTACAAAGAGAGATTCAAGCTGCATTTCGCACTGATGAAATTCGAAGGACTGCTCCTACACCACAAGATGAAATGAGAGCAGGAATGAGCTACTTTCACGAGACAATTTGGAAAGGGGTACCAAAGTTTTTGCGTCGGGTTGACACAGCTCTGAAGAACATTGGAGTAAATGAACGTGTCCCATATAATGCTCCTGTTATCCAATTCTCTTCTTGGATGGGAGGAGATCGTGATGGCAATCCTAGGGTGACCCCTGAAGTTACAAGGGATGTGTGTCTACTAGCTCGAATGATGGCTGCTAATTTGTACTTCTCTCAGATAGAGGATCTCATGTTCGAGTTGTCTATGTGGCGCTGCAATGACGAGCTTCGTGTTAGGGCTGAAGAGCTCCATGAATCCTCAAAGAGAGATGCAAAACATTATATCGAATTTTGGAAACAAATTCCTCCAAACGAACCTTATCGTGTCATTCTTGGAGGTGTGAGGGACAAACTGTATAATACTCGTGAACGTGCTCGCCAGTTATTAGCTAATGAGAACTCTGACATTCCTGAAGAGACAACCTTCACAAATGTTGAGCAGTTTTTGGAGCCTCTTGAACTGTGTTACAGGTCACTCTGTGCATGTGGTGACCGATCAATAGCAGATGGAAGCTTACTCGATTTCTTGCGGCAAGTTTCTACATTTGGACTTTCACTCGTAAGGCTCGACATCCGTCAAGAGTCAGAGAGGCACACAGACGTTATGGACGCAATTACAAAACACCTGGAGATTGGATCTTACCGAGAATGGTCAGAGGAACGCAGGCAGGAATGGCTTTTATCTGAGCTTAGTGGAAAGCGTCCTCTCTTCGGCCATGATCTCCCTAAGACAGAAGAAATTTCCGATGTTTTGGAAACTTTCCATGTCATTTCAGAACTTCCCTCAGACAGCTTTGGTGCCTATATCATCTCAATGGCAACATCCCCGTCTGATGTGCTTGCTGTTGAGCTTTTACAACGTGAATGCCATGTCAAACAGCCGTTGAGAGTTGTCCCACTGTTTGAAAAGCTTGCTGATCTTGAGTCTGCTCCTGCTGCTGTAGCGCGACTTTTCTCTATAGATTGGTACAGAAACCGAATCAATGGAAAGCAAGAAGTTATGATAGGATACTCAGATTCAGGAAAAGATGCAGGTCGTCTATCTGCTGCTTGGGCACTATACAAGGCTCAAGAGGAACTCATTAACGTAGCAAAGGAGTTTGGCGTTAAGCTGACAATGTTCCACGGCCGAGGTGGGACGGTTGGAAGAGGTGGTGGTCCTACTCATCTTGCTATATTATCACAGCCACCGGATACTATTCACGGCTCACTTCGGGTAACAGTTCAAGGTGAAGTTATTGAACAATCGTTTGGAGAGGAGCACCTATGCTTTAGAACACTTCAGCGTTTCACTGCTGCTACACTCGAGCACGGAATGCATCCTCCTGTGTCTCCAAAACCGGAATGGCGTGCCCTTTTGGATGAGATGGCTGTCATTGCAACAAAGGAATATCGCTCAATTGTTTTCCAAGAACCTCGTTTTGTTGAATACTTCCGATGTGCAACACCAGAGTTAGAATATGGACGAATGAACATTGGCAGTCGTCCATCAAAACGAAAGCCAAGTGGAGGAATTGAATCGCTCCGAGCTATTCCTTGGATTTTCGCTTGGACACAAACAAGGTTTCATTTACCAGTTTGGCTTGGTTTTGGAGAAGCATTCAAGCATGCAATTGAGAAAGATCCGAAGAATCTTCAAATGCTTCAGGATATGTACAATCAATGGCCTTTCTTTAGGGTTACCATTGACTTGGTTGAGATGGTTTTCGCCAAGGGAGACCCCGGGATCGCTTCCTTATACGACAAGCTCTTAGTTACACAAGAGCTGTGTCCATTTGGTGAGCGTCTGAGATCTAAATATGAAGAAACCAAGAGCTTTCTCCTCAAGGTTGCTGGTCACAAGGATATTCTTGAAGGAGACCCTTACTTAAAGCAACGGCTACGCCTTAGAGACTCATATATCACAACCCTTAATGTCTTACAAGCCTACACATTGAAGCAAATTCGTGATCCAGATTACCATGTGAAGATGAGGCCACATTTGTCAAAGGAGTATATGGAATCAAGCAAGCCAGCAGCAGAACTTGTTAAACTTAATCCAAAAAGTGAGTATGCTCCTGGTCTTGAGGATACCCTTATTTTGACAATGAAGGGTATAGCTGCTGGCATGCAAAACACTGGTTGA
Protein sequence

>Msa0300670

MATRNIEKMASIDAQLRLLAPKKVSDDDKLVEYDALLLDRFLDILQDLHGEDIRQTVQDCYELSAEYEGEHRPEKLEELGNMLTGLDAGDSIVIAKSFSHMLNLANLAEEVQIAYRRRIKLLKKGDFADENSAITESDIEETFKKLVTELKKTPLEVFDALKSQTVDLVLTAHPTQSIRRSLLQKHGRIRNNLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTAPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGVNERVPYNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRVRAEELHESSKRDAKHYIEFWKQIPPNEPYRVILGGVRDKLYNTRERARQLLANENSDIPEETTFTNVEQFLEPLELCYRSLCACGDRSIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVMDAITKHLEIGSYREWSEERRQEWLLSELSGKRPLFGHDLPKTEEISDVLETFHVISELPSDSFGAYIISMATSPSDVLAVELLQRECHVKQPLRVVPLFEKLADLESAPAAVARLFSIDWYRNRINGKQEVMIGYSDSGKDAGRLSAAWALYKAQEELINVAKEFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPEWRALLDEMAVIATKEYRSIVFQEPRFVEYFRCATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGEAFKHAIEKDPKNLQMLQDMYNQWPFFRVTIDLVEMVFAKGDPGIASLYDKLLVTQELCPFGERLRSKYEETKSFLLKVAGHKDILEGDPYLKQRLRLRDSYITTLNVLQAYTLKQIRDPDYHVKMRPHLSKEYMESSKPAAELVKLNPKSEYAPGLEDTLILTMKGIAAGMQNTG*