AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0380590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0380590 MtrunA17_Chr3g0134141 99.035 622 6 0 1 622 1 622 0.0 1279
Msa0380590 MtrunA17_Chr1g0153181 74.359 624 138 6 17 619 25 647 0.0 890
Msa0380590 MtrunA17_Chr4g0044541 72.358 615 144 5 20 610 30 642 0.0 882
Msa0380590 MtrunA17_Chr1g0201151 56.426 638 234 15 13 617 19 645 0.0 666
Msa0380590 MtrunA17_Chr6g0465751 50.886 621 251 14 13 601 14 612 0.0 570
Msa0380590 MtrunA17_Chr6g0466501 50.886 621 247 13 13 601 14 608 0.0 570
Msa0380590 MtrunA17_Chr6g0465691 50.000 552 218 13 82 601 1 526 1.91e-167 488
Msa0380590 MtrunA17_Chr6g0465691 33.813 278 170 4 25 289 32 308 1.95e-42 160
Msa0380590 MtrunA17_Chr6g0465691 35.079 191 106 3 24 197 118 307 7.60e-27 115
Msa0380590 MtrunA17_Chr6g0466451 50.965 518 231 12 98 600 1 510 4.75e-163 476
Msa0380590 MtrunA17_Chr6g0466451 36.585 287 163 5 25 294 16 300 1.34e-46 172
Msa0380590 MtrunA17_Chr6g0466451 36.019 211 109 6 24 215 105 308 2.94e-28 119
Msa0380590 MtrunA17_Chr6g0465631 50.965 518 231 12 98 600 1 510 7.57e-163 476
Msa0380590 MtrunA17_Chr6g0465631 36.585 287 163 5 25 294 16 300 1.39e-46 172
Msa0380590 MtrunA17_Chr6g0465631 36.019 211 109 6 24 215 105 308 3.08e-28 119
Msa0380590 MtrunA17_Chr0c09g0493511 49.726 547 231 14 82 601 1 530 2.23e-162 475
Msa0380590 MtrunA17_Chr0c09g0493511 34.892 278 167 4 25 289 32 308 7.01e-46 170
Msa0380590 MtrunA17_Chr0c09g0493511 36.126 191 104 3 24 197 118 307 7.92e-29 120
Msa0380590 MtrunA17_Chr7g0265341 46.078 612 292 11 17 598 63 666 6.40e-157 467
Msa0380590 MtrunA17_Chr1g0179701 43.936 437 224 6 25 459 63 480 4.97e-112 347
Msa0380590 MtrunA17_Chr1g0179701 33.333 186 111 2 24 197 241 425 4.87e-25 109
Msa0380590 MtrunA17_Chr3g0110211 39.766 171 100 3 25 193 26 195 1.03e-30 124
Msa0380590 MtrunA17_Chr3g0110211 31.937 191 118 6 105 292 18 199 3.47e-20 92.8
Msa0380590 MtrunA17_Chr3g0110211 32.447 188 107 5 206 390 28 198 5.11e-19 89.4
Msa0380590 MtrunA17_Chr2g0288251 28.137 263 162 8 25 265 61 318 3.38e-27 114
Msa0380590 MtrunA17_Chr2g0288251 25.912 274 179 8 114 374 62 324 3.61e-21 96.3
Msa0380590 MtrunA17_Chr2g0288251 30.601 183 100 7 18 182 153 326 4.66e-13 71.2
Msa0380590 MtrunA17_Chr2g0288251 24.413 213 149 5 175 384 32 235 1.01e-11 67.4
Msa0380590 MtrunA17_Chr1g0153871 25.267 281 201 5 113 389 98 373 1.57e-25 109
Msa0380590 MtrunA17_Chr1g0153871 28.077 260 163 6 25 265 98 352 1.53e-24 107
Msa0380590 MtrunA17_Chr1g0153871 32.044 181 101 4 19 182 185 360 4.19e-19 90.5
Msa0380590 MtrunA17_Chr1g0153871 24.479 192 131 4 198 386 92 272 2.66e-11 66.2
Msa0380590 MtrunA17_Chr4g0074711 27.757 263 162 9 25 265 75 331 6.13e-25 107
Msa0380590 MtrunA17_Chr4g0074711 24.648 284 199 8 114 387 76 354 1.23e-19 91.7
Msa0380590 MtrunA17_Chr3g0133651 25.874 286 183 8 25 286 94 374 3.56e-24 105
Msa0380590 MtrunA17_Chr3g0133651 24.252 301 214 6 99 390 76 371 6.52e-23 101
Msa0380590 MtrunA17_Chr3g0139111 26.429 280 165 7 25 271 61 332 1.13e-22 101
Msa0380590 MtrunA17_Chr3g0139111 25.967 181 115 4 204 383 61 223 9.64e-14 73.9
Msa0380590 MtrunA17_Chr4g0070231 27.338 278 160 7 22 266 44 312 1.58e-22 100
Msa0380590 MtrunA17_Chr4g0070231 27.597 308 190 9 97 383 31 326 1.51e-20 94.4
Msa0380590 MtrunA17_Chr8g0344491 27.143 280 162 7 22 268 60 330 1.95e-22 100
Msa0380590 MtrunA17_Chr8g0344491 26.490 302 186 10 103 383 57 343 5.23e-17 84.0
Msa0380590 MtrunA17_Chr2g0328791 25.887 282 164 7 25 266 16 292 6.01e-22 99.0
Msa0380590 MtrunA17_Chr2g0328791 25.946 185 123 5 204 385 16 189 9.36e-15 77.0
Msa0380590 MtrunA17_Chr4g0045221 26.429 280 162 8 25 265 117 391 5.27e-21 96.3
Msa0380590 MtrunA17_Chr4g0045221 24.756 307 190 11 114 390 118 413 5.90e-16 80.9
Msa0380590 MtrunA17_Chr4g0045221 28.646 192 128 5 197 385 110 295 4.27e-13 72.0
Msa0380590 MtrunA17_Chr6g0466541 35.220 159 68 3 237 395 2 125 8.99e-20 85.9
Msa0380590 MtrunA17_Chr6g0466541 37.415 147 65 5 145 289 1 122 2.00e-16 76.3
Msa0380590 MtrunA17_Chr0c09g0493521 59.701 67 21 1 17 77 12 78 2.29e-19 82.8
Msa0380590 MtrunA17_Chr6g0465621 67.925 53 17 0 25 77 26 78 2.43e-19 83.2
Msa0380590 MtrunA17_Chr6g0466441 67.925 53 17 0 25 77 26 78 2.43e-19 83.2
Msa0380590 MtrunA17_Chr4g0026301 27.888 251 163 7 17 261 105 343 3.36e-19 91.3
Msa0380590 MtrunA17_Chr6g0465701 51.220 82 31 2 12 84 4 85 8.90e-19 81.6
Msa0380590 MtrunA17_Chr0c09g0493581 58.209 67 22 1 17 77 12 78 1.38e-18 80.5
Msa0380590 MtrunA17_Chr6g0465741 59.701 67 26 1 543 608 40 106 1.62e-17 79.0
Msa0380590 MtrunA17_Chr7g0217261 28.287 251 162 7 17 261 344 582 3.84e-17 85.5
Msa0380590 MtrunA17_Chr7g0276201 23.622 254 175 5 24 269 104 346 6.99e-17 84.0
Msa0380590 MtrunA17_Chr7g0276201 26.207 290 180 10 107 388 99 362 3.17e-12 69.3
Msa0380590 MtrunA17_Chr3g0116631 31.183 186 117 5 205 387 111 288 1.49e-16 80.5
Msa0380590 MtrunA17_Chr3g0116631 29.885 174 115 4 112 278 109 282 2.24e-14 74.3
Msa0380590 MtrunA17_Chr3g0116631 28.000 175 104 4 26 184 111 279 7.93e-13 69.7
Msa0380590 MtrunA17_Chr3g0087481 32.778 180 112 5 205 381 62 235 4.48e-16 78.2
Msa0380590 MtrunA17_Chr3g0087481 26.744 172 112 4 26 184 62 232 4.19e-12 66.6
Msa0380590 MtrunA17_Chr8g0372111 25.769 260 163 9 26 270 420 664 4.53e-16 82.4
Msa0380590 MtrunA17_Chr8g0335981 23.413 252 174 7 26 268 217 458 7.86e-16 81.3
Msa0380590 MtrunA17_Chr7g0266451 24.206 252 170 9 24 269 101 337 4.12e-15 78.2
Msa0380590 MtrunA17_Chr7g0267571 27.684 177 104 3 26 182 111 283 7.49e-15 75.9
Msa0380590 MtrunA17_Chr7g0267571 32.124 193 121 7 190 376 95 283 2.50e-14 74.3
Msa0380590 MtrunA17_Chr1g0177101 29.412 170 106 3 26 182 110 278 2.70e-14 74.3
Msa0380590 MtrunA17_Chr1g0177101 30.114 176 112 5 205 376 110 278 8.00e-14 72.8
Msa0380590 MtrunA17_Chr4g0058151 30.645 186 115 5 205 387 124 298 3.61e-14 73.6
Msa0380590 MtrunA17_Chr4g0058151 26.946 167 113 3 26 184 124 289 7.98e-13 69.7
Msa0380590 MtrunA17_Chr6g0466551 60.000 65 25 1 538 601 34 98 7.88e-14 68.9
Msa0380590 MtrunA17_Chr7g0268551 27.437 277 154 10 205 459 18 269 2.23e-13 72.8
Msa0380590 MtrunA17_Chr2g0312971 29.310 174 105 6 25 185 114 282 5.66e-13 70.1
Msa0380590 MtrunA17_Chr4g0033701 30.387 181 95 6 198 378 22 171 8.55e-13 71.6
Msa0380590 MtrunA17_Chr1g0168601 32.716 162 94 3 225 384 84 232 2.61e-12 67.0
Msa0380590 MtrunA17_Chr7g0263001 41.975 81 46 1 308 387 37 117 2.82e-12 64.7
Msa0380590 MtrunA17_Chr5g0411091 28.272 191 124 6 197 384 91 271 6.51e-12 67.0
Msa0380590 MtrunA17_Chr4g0068631 27.097 155 106 3 26 175 90 242 7.72e-12 68.6
Msa0380590 MtrunA17_Chr4g0068631 26.923 156 110 3 112 265 88 241 2.25e-11 67.0
Msa0380590 MtrunA17_Chr7g0259641 29.268 246 141 11 170 397 549 779 1.69e-11 67.4
Msa0380590 MtrunA17_Chr1g0181111 28.708 209 135 4 192 388 73 279 3.21e-11 64.7
Msa0380590 MtrunA17_Chr1g0211191 28.188 149 89 2 37 168 83 230 8.53e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0380590 AT4G34110.1 68.781 599 177 6 24 617 36 629 0.0 812
Msa0380590 AT4G34110.1 34.948 289 171 3 110 397 34 306 1.37e-51 188
Msa0380590 AT4G34110.1 34.483 203 115 4 19 205 210 410 2.25e-27 117
Msa0380590 AT1G49760.1 65.655 626 187 4 23 620 44 669 0.0 793
Msa0380590 AT1G49760.2 65.655 626 187 4 23 620 44 669 0.0 793
Msa0380590 AT2G23350.1 63.666 622 196 8 24 620 46 662 0.0 760
Msa0380590 AT1G71770.1 54.016 635 235 14 24 615 59 679 0.0 608
Msa0380590 AT1G71770.2 54.016 635 235 14 24 615 59 679 0.0 608
Msa0380590 AT1G22760.1 53.945 621 251 10 24 618 49 660 0.0 603
Msa0380590 AT2G36660.1 39.900 599 301 11 22 598 22 583 1.18e-125 384
Msa0380590 AT1G34140.1 47.959 392 172 8 82 462 1 371 2.35e-112 343
Msa0380590 AT1G34140.1 35.714 280 163 4 25 289 32 309 1.68e-44 164
Msa0380590 AT1G34140.1 32.000 200 113 4 24 204 119 314 4.66e-25 108
Msa0380590 AT3G16380.1 44.845 388 208 4 25 408 22 407 5.09e-101 318
Msa0380590 AT3G16380.1 36.058 208 110 5 8 197 187 389 2.23e-27 117
Msa0380590 AT3G16380.1 35.714 196 111 5 195 389 13 194 3.37e-25 110
Msa0380590 AT1G11650.2 29.643 280 168 10 10 265 44 318 1.08e-27 116
Msa0380590 AT1G11650.2 25.581 301 209 9 104 395 51 345 3.48e-20 93.6
Msa0380590 AT2G18510.1 36.842 171 105 3 25 193 26 195 1.16e-27 115
Msa0380590 AT2G18510.1 30.159 189 112 5 205 390 27 198 6.49e-17 83.2
Msa0380590 AT5G54900.1 26.792 265 168 8 25 268 61 320 2.67e-27 114
Msa0380590 AT5G54900.1 24.573 293 202 9 113 396 61 343 5.04e-20 93.2
Msa0380590 AT5G54900.1 26.471 204 137 6 184 384 41 234 1.57e-15 79.3
Msa0380590 AT1G11650.1 28.679 265 160 9 10 250 44 303 2.25e-25 107
Msa0380590 AT1G11650.1 26.616 263 172 9 104 354 51 304 1.37e-17 84.3
Msa0380590 AT4G27000.1 25.379 264 171 8 25 268 81 338 2.49e-25 109
Msa0380590 AT4G27000.1 24.188 277 189 7 113 379 81 346 5.73e-19 90.1
Msa0380590 AT4G27000.1 27.315 216 129 6 195 407 72 262 1.31e-16 82.8
Msa0380590 AT1G47490.1 25.070 359 232 9 87 413 71 424 3.45e-25 109
Msa0380590 AT1G47490.1 27.974 311 186 11 25 309 102 400 2.83e-24 106
Msa0380590 AT3G14100.1 28.214 280 159 7 22 268 57 327 2.11e-24 106
Msa0380590 AT3G14100.1 28.723 282 164 10 103 363 54 319 1.28e-18 89.4
Msa0380590 AT3G14100.1 29.834 181 108 4 204 383 60 222 1.56e-15 79.7
Msa0380590 AT1G54080.1 27.500 280 161 7 22 268 61 331 2.31e-24 106
Msa0380590 AT1G54080.1 27.491 291 168 9 103 369 58 329 2.70e-18 88.2
Msa0380590 AT1G54080.1 29.834 181 108 4 204 383 64 226 2.00e-15 79.3
Msa0380590 AT1G54080.2 27.465 284 160 8 22 268 61 335 6.23e-23 102
Msa0380590 AT1G54080.2 27.458 295 167 10 103 369 58 333 6.15e-17 84.0
Msa0380590 AT1G54080.2 29.730 185 107 5 204 383 64 230 4.01e-14 75.5
Msa0380590 AT1G47500.1 27.974 311 186 12 25 309 104 402 6.72e-23 102
Msa0380590 AT1G47500.1 27.356 329 202 11 114 414 105 424 1.53e-22 101
Msa0380590 AT1G47500.1 25.581 215 145 6 186 395 86 290 1.44e-11 67.4
Msa0380590 AT3G19130.1 27.113 284 171 8 114 372 110 382 6.25e-22 99.4
Msa0380590 AT3G19130.1 27.338 278 157 9 25 265 109 378 1.43e-21 98.2
Msa0380590 AT1G17370.2 27.076 277 163 7 22 268 52 319 1.01e-21 98.6
Msa0380590 AT1G17370.2 28.058 278 168 8 103 363 49 311 3.03e-18 87.8
Msa0380590 AT1G17370.2 27.624 181 112 4 204 383 55 217 8.89e-13 71.2
Msa0380590 AT1G17370.1 26.786 280 163 7 22 268 52 322 2.34e-21 97.4
Msa0380590 AT1G17370.1 28.114 281 167 9 103 363 49 314 9.92e-19 89.4
Msa0380590 AT1G17370.1 27.624 181 112 4 204 383 55 217 1.02e-12 70.9
Msa0380590 AT1G49600.3 26.296 270 165 7 25 265 120 384 3.33e-21 97.4
Msa0380590 AT1G49600.3 24.749 299 203 7 114 398 121 411 4.15e-20 94.0
Msa0380590 AT1G49600.2 26.296 270 165 7 25 265 120 384 3.33e-21 97.4
Msa0380590 AT1G49600.2 24.749 299 203 7 114 398 121 411 4.15e-20 94.0
Msa0380590 AT1G49600.1 26.296 270 165 7 25 265 120 384 3.44e-21 97.4
Msa0380590 AT1G49600.1 26.007 273 183 6 114 372 121 388 3.40e-20 94.4
Msa0380590 AT5G19350.2 24.908 273 168 8 25 266 25 291 6.94e-21 95.9
Msa0380590 AT5G19350.2 23.050 282 197 6 113 379 25 301 7.57e-16 80.5
Msa0380590 AT5G19350.2 24.651 215 123 5 18 203 114 318 7.09e-14 74.7
Msa0380590 AT5G19350.2 26.540 211 138 6 201 408 22 218 3.78e-13 72.4
Msa0380590 AT5G19350.1 24.188 277 169 8 25 266 25 295 3.00e-20 94.4
Msa0380590 AT5G19350.1 23.741 278 188 5 113 371 25 297 1.19e-15 80.1
Msa0380590 AT5G19350.1 26.699 206 136 5 201 403 22 215 2.91e-14 75.9
Msa0380590 AT5G19350.1 25.114 219 121 6 18 203 114 322 2.12e-13 73.2
Msa0380590 AT5G41690.1 20.993 443 258 11 25 378 69 508 9.74e-20 93.6
Msa0380590 AT5G41690.1 21.148 331 212 4 98 382 57 384 3.58e-13 72.8
Msa0380590 AT5G41690.3 20.993 443 258 11 25 378 69 508 9.74e-20 93.6
Msa0380590 AT5G41690.3 21.148 331 212 4 98 382 57 384 3.58e-13 72.8
Msa0380590 AT5G41690.2 20.993 443 258 11 25 378 69 508 9.74e-20 93.6
Msa0380590 AT5G41690.2 21.148 331 212 4 98 382 57 384 3.58e-13 72.8
Msa0380590 AT1G45100.1 22.680 388 252 11 22 370 62 440 4.34e-18 88.2
Msa0380590 AT3G52150.2 32.961 179 115 4 205 381 78 253 2.00e-17 82.8
Msa0380590 AT3G52150.2 30.159 189 115 6 103 278 69 253 1.74e-15 77.0
Msa0380590 AT3G52150.1 32.961 179 115 4 205 381 78 253 2.00e-17 82.8
Msa0380590 AT3G52150.1 30.159 189 115 6 103 278 69 253 1.74e-15 77.0
Msa0380590 AT4G00830.3 24.713 348 228 9 111 453 115 433 1.81e-16 83.2
Msa0380590 AT4G00830.3 26.749 243 156 6 24 261 116 341 5.45e-15 78.6
Msa0380590 AT4G00830.5 24.713 348 228 9 111 453 115 433 1.81e-16 83.2
Msa0380590 AT4G00830.5 26.749 243 156 6 24 261 116 341 5.45e-15 78.6
Msa0380590 AT4G00830.2 24.501 351 233 10 111 453 115 441 2.46e-16 82.8
Msa0380590 AT4G00830.2 26.230 244 164 6 24 261 116 349 7.82e-16 81.3
Msa0380590 AT4G00830.1 24.501 351 233 10 111 453 115 441 2.46e-16 82.8
Msa0380590 AT4G00830.1 26.230 244 164 6 24 261 116 349 7.82e-16 81.3
Msa0380590 AT4G00830.6 24.501 351 233 10 111 453 115 441 2.46e-16 82.8
Msa0380590 AT4G00830.6 26.230 244 164 6 24 261 116 349 7.82e-16 81.3
Msa0380590 AT3G52380.1 27.059 170 100 3 26 175 118 283 1.16e-15 79.0
Msa0380590 AT3G52380.1 29.032 186 125 5 205 386 118 300 1.12e-13 73.2
Msa0380590 AT3G52380.1 27.222 180 112 5 114 280 118 291 4.48e-11 65.1
Msa0380590 AT3G19350.1 48.611 72 37 0 532 603 23 94 1.55e-15 73.2
Msa0380590 AT5G50250.1 29.545 176 115 3 26 193 115 289 1.74e-15 77.8
Msa0380590 AT5G50250.1 30.319 188 113 5 205 387 115 289 9.41e-14 72.8
Msa0380590 AT2G15500.1 31.361 169 51 3 259 427 29 132 2.02e-15 73.9
Msa0380590 AT2G35410.1 30.168 179 113 4 205 378 97 268 2.42e-15 77.8
Msa0380590 AT2G37220.1 28.191 188 112 3 114 278 93 280 2.64e-15 77.4
Msa0380590 AT2G37220.1 25.714 210 128 3 11 193 78 286 5.82e-14 73.2
Msa0380590 AT4G00830.4 24.217 351 234 10 111 453 115 441 2.69e-15 79.3
Msa0380590 AT4G00830.4 25.506 247 162 7 24 261 116 349 7.01e-14 75.1
Msa0380590 AT3G52660.3 24.291 247 167 5 24 261 92 327 3.01e-14 75.9
Msa0380590 AT3G52660.1 24.291 247 167 5 24 261 92 327 3.01e-14 75.9
Msa0380590 AT3G52660.2 24.291 247 167 5 24 261 92 327 3.01e-14 75.9
Msa0380590 AT1G47490.2 29.240 171 111 6 25 185 102 272 3.53e-14 74.3
Msa0380590 AT1G47490.2 27.397 219 139 8 186 395 81 288 1.47e-12 69.3
Msa0380590 AT4G16280.3 26.087 161 116 1 17 174 113 273 5.32e-14 75.5
Msa0380590 AT2G44710.2 21.569 255 183 6 26 272 216 461 5.65e-14 75.9
Msa0380590 AT2G44710.1 21.569 255 183 6 26 272 216 461 5.65e-14 75.9
Msa0380590 AT2G44710.4 21.569 255 183 6 26 272 131 376 6.20e-14 75.5
Msa0380590 AT4G16280.4 26.087 161 116 1 17 174 38 198 7.93e-14 75.1
Msa0380590 AT4G16280.2 26.087 161 116 1 17 174 113 273 9.93e-14 75.1
Msa0380590 AT2G16940.1 30.573 157 91 3 36 176 194 348 1.09e-13 74.7
Msa0380590 AT2G16940.5 30.573 157 91 3 36 176 53 207 1.44e-13 73.6
Msa0380590 AT2G16940.4 30.573 157 91 3 36 176 53 207 1.44e-13 73.6
Msa0380590 AT4G24770.1 29.412 187 118 4 205 388 152 327 1.55e-13 72.8
Msa0380590 AT4G24770.1 27.528 178 120 3 15 184 141 317 1.57e-13 72.8
Msa0380590 AT4G24770.2 29.412 187 118 4 205 388 152 327 1.55e-13 72.8
Msa0380590 AT4G24770.2 27.528 178 120 3 15 184 141 317 1.57e-13 72.8
Msa0380590 AT2G16940.2 30.573 157 91 3 36 176 243 397 1.95e-13 73.9
Msa0380590 AT1G47500.2 28.070 171 113 6 25 185 104 274 5.68e-13 70.9
Msa0380590 AT1G47500.2 26.866 201 132 6 186 381 86 276 7.17e-11 64.3
Msa0380590 AT1G01080.1 26.562 192 126 5 106 283 102 292 6.26e-13 70.5
Msa0380590 AT3G13224.2 25.595 168 103 4 205 367 21 171 1.99e-12 69.7
Msa0380590 AT1G01080.2 26.425 193 126 5 106 283 102 293 3.00e-12 68.2
Msa0380590 AT3G13224.3 25.595 168 103 4 205 367 12 162 3.24e-12 68.9
Msa0380590 AT5G40490.1 26.230 183 117 5 205 385 44 210 5.60e-12 68.6
Msa0380590 AT3G13224.1 25.595 168 103 4 205 367 21 171 1.73e-11 65.1
Msa0380590 AT2G16940.3 28.916 166 91 4 36 176 223 386 1.83e-11 67.4
Msa0380590 AT4G26650.1 26.087 184 111 9 205 371 17 192 2.41e-11 66.6
Msa0380590 AT4G26650.2 26.087 184 111 9 205 371 14 189 2.58e-11 66.6
Msa0380590 AT3G46020.1 31.313 99 67 1 302 399 3 101 2.69e-11 61.2
Msa0380590 AT2G47310.1 26.047 215 144 7 189 396 94 300 3.05e-11 66.6
Msa0380590 AT5G40490.2 27.273 165 102 5 223 385 45 193 5.70e-11 65.5
Msa0380590 AT5G03580.1 37.500 80 50 0 307 386 18 97 5.93e-11 60.1
Msa0380590 AT1G60000.1 22.280 193 143 3 5 191 66 257 6.46e-11 63.5
Msa0380590 AT5G47620.1 25.568 176 115 6 205 371 8 176 6.53e-11 65.5
Msa0380590 AT5G47620.2 25.568 176 115 6 205 371 8 176 6.53e-11 65.5
Msa0380590 AT5G47620.5 25.568 176 115 6 205 371 8 176 6.53e-11 65.5
Msa0380590 AT4G14300.1 25.405 185 131 5 205 385 8 189 7.07e-11 65.1
Msa0380590 AT4G14300.2 25.405 185 131 5 205 385 8 189 7.07e-11 65.1
Msa0380590 AT1G03457.3 39.759 83 46 2 111 192 224 303 7.77e-11 64.3

Find 189 sgRNAs with CRISPR-Local

Find 532 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGATTCTTCATTCTCAAAT+TGG 0.190670 3_1:+82349314 None:intergenic
TACTACTTGGTTACTGGATT+TGG 0.244519 3_1:-82343198 Msa0380590:three_prime_UTR
TGTTGCTCCTGCTCAGAAAA+AGG 0.264739 3_1:-82348485 Msa0380590:CDS
GTCTGTTTGACTTTGTTTCT+AGG 0.281094 3_1:-82343176 Msa0380590:three_prime_UTR
CTTACAGTCCTCTGCTGTTC+AGG 0.285841 3_1:+82343752 None:intergenic
GCTGGAGCTGCAAAGGTTAC+TGG 0.301054 3_1:-82343579 Msa0380590:CDS
GGAACACCAGCAGGGTAAAA+TGG 0.312505 3_1:+82344503 None:intergenic
GATGGTAAATCAAAATGTTT+TGG 0.314489 3_1:-82349070 Msa0380590:CDS
TAATATATGCAGGCTGGATT+TGG 0.320619 3_1:-82344155 Msa0380590:intron
AAAGGTTACTGGGATGCTTT+TGG 0.320904 3_1:-82343568 Msa0380590:CDS
AGCGAACTGTTCTCCGAGTT+TGG 0.328906 3_1:-82348818 Msa0380590:CDS
CCAGTAACCAAGTAGTAAAA+AGG 0.331065 3_1:+82343204 None:intergenic
TGTTCGGATCTGTAGGGATT+TGG 0.334733 3_1:-82350154 Msa0380590:CDS
TATGCTTGAAATCTGCTGTC+TGG 0.343200 3_1:-82343129 Msa0380590:three_prime_UTR
TATCTCTATCCTGCTTCCTT+TGG 0.344410 3_1:+82349224 None:intergenic
AGAGAGAAAAGCAAGGTTAC+AGG 0.348997 3_1:-82348461 Msa0380590:intron
CTTCATGCCCATGGTTCAGC+AGG 0.350116 3_1:-82344075 Msa0380590:CDS
CAATGACGTGGCGGCGGCTC+CGG 0.357222 3_1:-82350283 Msa0380590:CDS
CCTGCTCCCCGCCGTCCGCC+TGG 0.361646 3_1:+82344035 None:intergenic
TACCCGCAGCAACTGGTTCC+TGG 0.366368 3_1:-82344131 Msa0380590:CDS
TCTCAACAATCCCTAGGTTA+TGG 0.366487 3_1:-82350129 Msa0380590:CDS
ACCATGGGCATGAAGAAGTT+TGG 0.373711 3_1:+82344083 None:intergenic
CCCTGCTGGTGTTCCTGGGA+TGG 0.390484 3_1:-82344495 Msa0380590:CDS
GCACCACCTGGTCTCATTCC+AGG 0.392663 3_1:+82344113 None:intergenic
CGTGTCTATCGATATCCTTC+TGG 0.397105 3_1:-82343860 Msa0380590:CDS
TCAGCGTCCAGGCGGACGGC+GGG 0.403476 3_1:-82344042 Msa0380590:CDS
CCAGGCGGACGGCGGGGAGC+AGG 0.404491 3_1:-82344035 Msa0380590:CDS
CAGACCTGTTGCTGCATCAT+TGG 0.409615 3_1:+82343984 None:intergenic
CATCTGTAACCGACTCTGAT+AGG 0.413909 3_1:+82349158 None:intergenic
CAGGGAATTAGTAGGGGATC+TGG 0.415025 3_1:-82348675 Msa0380590:CDS
TATGATCAATTGCCCTGTCC+AGG 0.415385 3_1:+82349431 None:intergenic
TACTACATTGTTCGCGGAGC+GGG 0.419146 3_1:-82350439 Msa0380590:five_prime_UTR
AATGGCATTCGAGGTGCAAT+AGG 0.419626 3_1:+82344521 None:intergenic
GCATGAAGAAGTTTGGCATT+GGG 0.422495 3_1:+82344090 None:intergenic
TGCTGAGATGAATGGCAAAA+TGG 0.424613 3_1:-82348527 Msa0380590:CDS
TGTAATTACCTGAGATATGA+AGG 0.427155 3_1:+82344439 None:intergenic
CATGCACAATGTTGGCTGTT+CGG 0.436356 3_1:+82350525 None:intergenic
GGCATGAAGAAGTTTGGCAT+TGG 0.443157 3_1:+82344089 None:intergenic
TTGTTTCTGTTCGGATCTGT+AGG 0.445634 3_1:-82350161 Msa0380590:CDS
TGTTGGCCCTGCTGAACCAT+GGG 0.446639 3_1:+82344068 None:intergenic
TCGGTCAAGTTGTTTCTGTT+CGG 0.446639 3_1:-82350170 Msa0380590:CDS
GGCTGTAGCCAGAGCCTGCA+TGG 0.447002 3_1:+82343790 None:intergenic
GCGAAATGAAAACCCTAAAT+CGG 0.448748 3_1:+82350357 None:intergenic
CGCCTGGACGCTGACCTTGT+TGG 0.449222 3_1:+82344051 None:intergenic
CCATTGCTATCTTGCAAGAA+AGG 0.449772 3_1:+82349371 None:intergenic
TCCTCCAGCCTTCATATCTC+AGG 0.450243 3_1:-82344447 Msa0380590:intron
TTTACCCTGCTGGTGTTCCT+GGG 0.450834 3_1:-82344499 Msa0380590:CDS
TGCTTCCTCGGGAGTTGAAA+AGG 0.450958 3_1:+82348644 None:intergenic
GCAATAGGAGCCATTGTAAC+CGG 0.453114 3_1:+82344536 None:intergenic
TTGGTGAAGATAAATTGAAA+TGG 0.453294 3_1:+82350383 None:intergenic
ATTGCCAATGATGCAGCAAC+AGG 0.453322 3_1:-82343988 Msa0380590:intron
ATTTGGTTACCCGCAGCAAC+TGG 0.454612 3_1:-82344138 Msa0380590:CDS
GAGATCCACAGGGAATTAGT+AGG 0.456137 3_1:-82348683 Msa0380590:CDS
GACGTCGTTGTCAGATGATT+CGG 0.464012 3_1:+82350258 None:intergenic
CCCATCCCAGGAACACCAGC+AGG 0.464637 3_1:+82344494 None:intergenic
GACTAAAGTTGCTGAGGCCG+TGG 0.464712 3_1:-82343493 Msa0380590:CDS
TGATGATGCAGAACCTGGAC+AGG 0.468640 3_1:-82349444 Msa0380590:intron
GAATCGGTTTGTTGTTCAGT+GGG 0.469931 3_1:+82349920 None:intergenic
ACTTTAGTCTTGAGAGCCTC+TGG 0.470970 3_1:+82343507 None:intergenic
ACAGATTCTGCGAGATCCAC+AGG 0.472786 3_1:-82348694 Msa0380590:intron
TTGTTGGCCCTGCTGAACCA+TGG 0.474757 3_1:+82344067 None:intergenic
ATGCTTGAAATCTGCTGTCT+GGG 0.476446 3_1:-82343128 Msa0380590:three_prime_UTR
TGGAACGCCCATGCAGGCTC+TGG 0.477215 3_1:-82343798 Msa0380590:CDS
AGAGAAGCTAGTTGATCAGT+TGG 0.477475 3_1:+82343432 None:intergenic
TACAGCACGAGTTGCTTCCT+CGG 0.478169 3_1:+82348632 None:intergenic
ATCTCGGTAAACTGTCATGC+AGG 0.479765 3_1:+82343379 None:intergenic
CAGAAACAACTTGACCGATC+TGG 0.481273 3_1:+82350175 None:intergenic
GCACCACTCTTCCGAACACT+AGG 0.481441 3_1:+82349874 None:intergenic
CCTGCTGGTGTTCCTGGGAT+GGG 0.484295 3_1:-82344494 Msa0380590:CDS
ATTCCGATGCCAGGAGTAGC+TGG 0.486336 3_1:-82343821 Msa0380590:CDS
TATCGATAGACACGTCCTCT+TGG 0.487327 3_1:+82343869 None:intergenic
GGCGTTCCACCAGCTACTCC+TGG 0.488926 3_1:+82343812 None:intergenic
TTCAAAGAACGCATGTATCT+CGG 0.489583 3_1:+82343363 None:intergenic
CACTGAACAACAAACCGATT+CGG 0.490085 3_1:-82349918 Msa0380590:CDS
TTTGGCATTGGGGCACCACC+TGG 0.493082 3_1:+82344101 None:intergenic
ATGAATGGCAAAATGGTTGC+GGG 0.498816 3_1:-82348520 Msa0380590:CDS
CTGGAGCTGCAAAGGTTACT+GGG 0.499264 3_1:-82343578 Msa0380590:CDS
CTGGCATCGGAATACCTTGT+GGG 0.500780 3_1:+82343831 None:intergenic
GGCCAACAAGGTCAGCGTCC+AGG 0.502732 3_1:-82344053 Msa0380590:CDS
CGAATCGGTTTGTTGTTCAG+TGG 0.502963 3_1:+82349919 None:intergenic
CTTTCCATTGAGTGCCTCCA+CGG 0.505448 3_1:+82349009 None:intergenic
TTCCGCTACTACATTGTTCG+CGG 0.509275 3_1:-82350445 Msa0380590:five_prime_UTR
AGTGCAATTGACAAGTTAAA+CGG 0.509973 3_1:-82349286 Msa0380590:CDS
GATGCTTCTGGTCTGTCTAA+AGG 0.510690 3_1:-82349349 Msa0380590:CDS
CATGCTGCTCAACGATAAAC+CGG 0.510980 3_1:-82349263 Msa0380590:CDS
GAGAAGCTAGTTGATCAGTT+GGG 0.512991 3_1:+82343433 None:intergenic
TGAGCAGGAGCAACATAAAG+AGG 0.513452 3_1:+82348493 None:intergenic
ATGGGACAACAAATTATGTA+TGG 0.513951 3_1:-82344476 Msa0380590:CDS
TTGGCTTCTCAACAATCCCT+AGG 0.514758 3_1:-82350135 Msa0380590:CDS
AGCTGGTGGAACGCCCATGC+AGG 0.515799 3_1:-82343804 Msa0380590:CDS
AAGATAGCAATGGATGCTTC+TGG 0.515938 3_1:-82349361 Msa0380590:CDS
AGATCCACAGGGAATTAGTA+GGG 0.516201 3_1:-82348682 Msa0380590:CDS
TGGAAATGACCAACGTAGAC+CGG 0.518569 3_1:+82349244 None:intergenic
CATGAAGAAGTTTGGCATTG+GGG 0.520879 3_1:+82344091 None:intergenic
GCCAAACTTCTTCATGCCCA+TGG 0.522742 3_1:-82344084 Msa0380590:CDS
ATATGAAGGCTGGAGGAGCT+TGG 0.523155 3_1:+82344453 None:intergenic
TCGTAGCTTGCTGAGATGAA+TGG 0.525753 3_1:-82348535 Msa0380590:intron
GTTGTCAGATGATTCGGAAC+CGG 0.525867 3_1:+82350264 None:intergenic
TGTAGTAGCGGAAGTGGAGA+GGG 0.526354 3_1:+82350455 None:intergenic
CTCATCGCGACCCTAGTGTT+CGG 0.527657 3_1:-82349885 Msa0380590:CDS
GTCAGCGTCCAGGCGGACGG+CGG 0.528898 3_1:-82344043 Msa0380590:CDS
ATTACCTGAGATATGAAGGC+TGG 0.529283 3_1:+82344443 None:intergenic
TGGTCATTTCCAAAGGAAGC+AGG 0.530354 3_1:-82349233 Msa0380590:CDS
TCAATCAGATGCAACACCTC+AGG 0.532271 3_1:+82343534 None:intergenic
GTTCAGGAGGAGCATTTGCA+AGG 0.532273 3_1:+82343768 None:intergenic
TCTGGTCTGTCTAAAGGCTA+CGG 0.533319 3_1:-82349343 Msa0380590:CDS
AAAGCCGTGGAGGCACTCAA+TGG 0.533685 3_1:-82349013 Msa0380590:CDS
ACAGCACGAGTTGCTTCCTC+GGG 0.536352 3_1:+82348633 None:intergenic
TTCCAGGAACCAGTTGCTGC+GGG 0.536366 3_1:+82344129 None:intergenic
GATGACAAGGAGTGGTATGT+TGG 0.537605 3_1:-82348980 Msa0380590:CDS
GAACAATGTAGTAGCGGAAG+TGG 0.539241 3_1:+82350449 None:intergenic
GTAGAGAAGATTGAGCATGC+TGG 0.539286 3_1:-82343597 Msa0380590:CDS
AAGACATGAGCAGAGTATGA+AGG 0.540087 3_1:-82348915 Msa0380590:CDS
GCAGGGTAAAATGGCATTCG+AGG 0.543332 3_1:+82344512 None:intergenic
ATAATTTGTTGTCCCATCCC+AGG 0.547832 3_1:+82344482 None:intergenic
TGCTCAATCTTCTCTACTAG+AGG 0.548946 3_1:+82343603 None:intergenic
AAGGTCAGCGTCCAGGCGGA+CGG 0.552143 3_1:-82344046 Msa0380590:CDS
AAGATCGTAAAGCTGTGAAT+CGG 0.552323 3_1:+82350203 None:intergenic
TGTTTCTGTTCGGATCTGTA+GGG 0.553345 3_1:-82350160 Msa0380590:CDS
AATTGACATAACCATAACCT+AGG 0.557075 3_1:+82350118 None:intergenic
TGAGAATACATAATCCGAAT+CGG 0.557323 3_1:+82349904 None:intergenic
TGTGAACAATGACGTGGCGG+CGG 0.559915 3_1:-82350289 Msa0380590:CDS
TGAGCATGCTGGAGCTGCAA+AGG 0.560400 3_1:-82343586 Msa0380590:CDS
CCACAAGGTATTCCGATGCC+AGG 0.564133 3_1:-82343830 Msa0380590:CDS
GCAAGTGAGGCCGGTTACAA+TGG 0.565595 3_1:-82344546 Msa0380590:CDS
AAACTTGTATCTCAAGAACT+TGG 0.566366 3_1:-82348867 Msa0380590:CDS
GACCCTAGTGTTCGGAAGAG+TGG 0.566788 3_1:-82349877 Msa0380590:CDS
ATGGTTCAGCAGGGCCAACA+AGG 0.568025 3_1:-82344065 Msa0380590:CDS
TTATCTTAAGAGCAATGCTA+AGG 0.569193 3_1:-82343054 None:intergenic
CCTTTCTTGCAAGATAGCAA+TGG 0.569880 3_1:-82349371 Msa0380590:CDS
TGAATGGATTCATAGATGCT+TGG 0.574263 3_1:-82343639 Msa0380590:intron
GATGAATGGCAAAATGGTTG+CGG 0.576429 3_1:-82348521 Msa0380590:CDS
GCTGTAGCCAGAGCCTGCAT+GGG 0.576435 3_1:+82343791 None:intergenic
CTGGTTCCTGGAATGAGACC+AGG 0.580099 3_1:-82344119 Msa0380590:CDS
CCTGGCATCGGAATACCTTG+TGG 0.582727 3_1:+82343830 None:intergenic
TGGGTTGTGAAGTCATGAAA+AGG 0.583403 3_1:-82343109 Msa0380590:three_prime_UTR
TGAAGTTACTGTACCAAACT+CGG 0.583558 3_1:+82348805 None:intergenic
TGCATCATTGGCAATGAATG+TGG 0.584482 3_1:+82343996 None:intergenic
TGGCAGCGCATGCACAATGT+TGG 0.586071 3_1:+82350517 None:intergenic
TCAGATGCAACACCTCAGGC+TGG 0.586095 3_1:+82343538 None:intergenic
ATGTAGTAGCGGAAGTGGAG+AGG 0.586767 3_1:+82350454 None:intergenic
GCACAATGTTGGCTGTTCGG+AGG 0.588552 3_1:+82350528 None:intergenic
GCAATATGCTAGCTAATCCA+AGG 0.589078 3_1:+82343248 None:intergenic
TTCATGCCCATGGTTCAGCA+GGG 0.589406 3_1:-82344074 Msa0380590:CDS
AGAAATTTGATGACAAGGAG+TGG 0.592245 3_1:-82348988 Msa0380590:CDS
TCTACGTTGGTCATTTCCAA+AGG 0.593767 3_1:-82349240 Msa0380590:CDS
CCTTCTGGTCGCAACCCACA+AGG 0.595900 3_1:-82343845 Msa0380590:CDS
CAGCGTCCAGGCGGACGGCG+GGG 0.601413 3_1:-82344041 Msa0380590:CDS
ACAGTCCTCTGCTGTTCAGG+AGG 0.601576 3_1:+82343755 None:intergenic
TGGTACAGTAACTTCATGCA+AGG 0.601719 3_1:-82348798 Msa0380590:intron
CCTTGTGGGTTGCGACCAGA+AGG 0.601909 3_1:+82343845 None:intergenic
CCACCAGCTACTCCTGGCAT+CGG 0.607074 3_1:+82343818 None:intergenic
TTCAGGAGGAGCATTTGCAA+GGG 0.607198 3_1:+82343769 None:intergenic
TGGAAAGAAATTTGATGACA+AGG 0.609034 3_1:-82348993 Msa0380590:CDS
ATTCCAGGAACCAGTTGCTG+CGG 0.615044 3_1:+82344128 None:intergenic
CTACTACATTGTTCGCGGAG+CGG 0.616082 3_1:-82350440 Msa0380590:five_prime_UTR
GTAGTAATGAGAGATGTAGA+TGG 0.616292 3_1:-82349088 Msa0380590:CDS
AACGATAAACCGGTCTACGT+TGG 0.616304 3_1:-82349253 Msa0380590:CDS
TTTGGAGATGGACCAGCCTG+AGG 0.621857 3_1:-82343550 Msa0380590:CDS
ATGCTCCTCCTGAACAGCAG+AGG 0.623330 3_1:-82343760 Msa0380590:CDS
GCTCAATCTTCTCTACTAGA+GGG 0.623607 3_1:+82343604 None:intergenic
TGCTGCTGCTAAAGCCGTGG+AGG 0.626357 3_1:-82349023 Msa0380590:CDS
ACGTTTCAATCTCCGAACAA+TGG 0.626823 3_1:-82350328 Msa0380590:exon
ATTGACATAACCATAACCTA+GGG 0.628812 3_1:+82350119 None:intergenic
AACATTTCTCAACACATCCA+CGG 0.633247 3_1:+82343476 None:intergenic
CCGATGCCAGGAGTAGCTGG+TGG 0.636248 3_1:-82343818 Msa0380590:CDS
ACCTGAGATATGAAGGCTGG+AGG 0.642986 3_1:+82344446 None:intergenic
TCTCAAGACTAAAGTTGCTG+AGG 0.646425 3_1:-82343499 Msa0380590:CDS
AATTTCAGTAACCCTCATGA+CGG 0.648870 3_1:-82350099 Msa0380590:intron
CTCCGCGAACAATGTAGTAG+CGG 0.655189 3_1:+82350443 None:intergenic
AATCGGTTTGTTGTTCAGTG+GGG 0.658473 3_1:+82349921 None:intergenic
TCTCGGTAAACTGTCATGCA+GGG 0.659144 3_1:+82343380 None:intergenic
CACCACTCTTCCGAACACTA+GGG 0.663524 3_1:+82349875 None:intergenic
GATCCACAGGGAATTAGTAG+GGG 0.663558 3_1:-82348681 Msa0380590:CDS
GCATCATTGGCAATGAATGT+GGG 0.664288 3_1:+82343997 None:intergenic
CAGATTCTGCGAGATCCACA+GGG 0.664919 3_1:-82348693 Msa0380590:CDS
AAAAGGAAGAGAGAAAAGCA+AGG 0.668923 3_1:-82348468 Msa0380590:CDS
GAATGTGGGAGTTGTTGCAT+AGG 0.671262 3_1:+82344011 None:intergenic
CCATCCCAGGAACACCAGCA+GGG 0.678496 3_1:+82344495 None:intergenic
AGATGCTGCTGCTAAAGCCG+TGG 0.680131 3_1:-82349026 Msa0380590:CDS
CAACAAGGTCAGCGTCCAGG+CGG 0.681067 3_1:-82344050 Msa0380590:CDS
GCATCTGATTGAGTCACCAG+AGG 0.683305 3_1:-82343523 Msa0380590:CDS
GATGATGCAGAACCTGGACA+GGG 0.684090 3_1:-82349443 Msa0380590:intron
GTAGTAGCGGAAGTGGAGAG+GGG 0.690312 3_1:+82350456 None:intergenic
CGAGAATGTGAACAATGACG+TGG 0.696586 3_1:-82350295 Msa0380590:CDS
ACAACGACGTCGTTGTACGT+CGG 0.715761 3_1:-82350246 Msa0380590:CDS
GATCCCCTACTAATTCCCTG+TGG 0.725738 3_1:+82348678 None:intergenic
GAATGTGAACAATGACGTGG+CGG 0.734927 3_1:-82350292 Msa0380590:CDS
GTTCCTGGAATGAGACCAGG+TGG 0.758688 3_1:-82344116 Msa0380590:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTAATATAATATAATT+AGG + chr3_1:82348764-82348783 None:intergenic 0.0%
!! TTATTAAATTAACAAAAACA+TGG + chr3_1:82347175-82347194 None:intergenic 10.0%
!!! ATTTGTTTCTTTATTTAATA+AGG + chr3_1:82348478-82348497 None:intergenic 10.0%
!! AAACAAATCATAAAATATAT+TGG - chr3_1:82348781-82348800 Msa0380590:intron 10.0%
!! AACAAATCATAAAATATATT+GGG - chr3_1:82348782-82348801 Msa0380590:intron 10.0%
!! AAATATTAATAATGATATCA+TGG - chr3_1:82348812-82348831 Msa0380590:CDS 10.0%
!! AATATTAATAATGATATCAT+GGG - chr3_1:82348813-82348832 Msa0380590:CDS 10.0%
!! AAAAAATAATAATGATATCA+TGG - chr3_1:82348850-82348869 Msa0380590:CDS 10.0%
!! AAAAATAATAATGATATCAT+GGG - chr3_1:82348851-82348870 Msa0380590:CDS 10.0%
!!! AAAGGTATATTTAATCTTTT+TGG + chr3_1:82343091-82343110 None:intergenic 15.0%
!!! TTTTTTTTTTCACAAATTTC+AGG - chr3_1:82343994-82344013 Msa0380590:CDS 15.0%
!!! TTTTTTTTTCACAAATTTCA+GGG - chr3_1:82343995-82344014 Msa0380590:CDS 15.0%
!! ATGTTTAATAATTCTGTTAT+TGG - chr3_1:82344101-82344120 Msa0380590:CDS 15.0%
!! TTTATTAAAATCAAAGAACA+TGG + chr3_1:82345293-82345312 None:intergenic 15.0%
!!! AATCATGTAATTTTTTTGTT+TGG + chr3_1:82345336-82345355 None:intergenic 15.0%
!!! AAAATTACATGATTTTCATT+TGG - chr3_1:82345342-82345361 Msa0380590:intron 15.0%
!!! ACCTAATATAAAAAACTTTT+GGG + chr3_1:82345412-82345431 None:intergenic 15.0%
!!! AAAAGTTTTTTATATTAGGT+GGG - chr3_1:82345412-82345431 Msa0380590:intron 15.0%
!!! AAACTCTAAATCATTTTTAA+TGG - chr3_1:82345517-82345536 Msa0380590:intron 15.0%
!!! AAAGCATTAAACAAAAATTT+GGG + chr3_1:82345697-82345716 None:intergenic 15.0%
!!! CAGAAATTTGTTTTAAAAAA+AGG - chr3_1:82346190-82346209 Msa0380590:intron 15.0%
!! AAGATATAACATAATATGTA+TGG + chr3_1:82347721-82347740 None:intergenic 15.0%
!! TGAAAAACATTATAAAGAAA+AGG + chr3_1:82347898-82347917 None:intergenic 15.0%
!!! AGTTTTATTTAATTCAAATC+AGG - chr3_1:82348303-82348322 Msa0380590:intron 15.0%
!! AACTAGTATTAGAATAAATA+GGG + chr3_1:82348732-82348751 None:intergenic 15.0%
!! AAACTAGTATTAGAATAAAT+AGG + chr3_1:82348733-82348752 None:intergenic 15.0%
!!! GATAAATTGAAATGGTTTTT+AGG + chr3_1:82343194-82343213 None:intergenic 20.0%
!!! TGTTAACTTGTATCTAATTT+AGG - chr3_1:82343865-82343884 Msa0380590:CDS 20.0%
!!! TTTTTTTTCACAAATTTCAG+GGG - chr3_1:82343996-82344015 Msa0380590:CDS 20.0%
!! TTGATCATATTCAAATCTAT+TGG - chr3_1:82345021-82345040 Msa0380590:intron 20.0%
!!! ACCCAAAAGTTTTTTATATT+AGG - chr3_1:82345408-82345427 Msa0380590:intron 20.0%
!!! CACCTAATATAAAAAACTTT+TGG + chr3_1:82345413-82345432 None:intergenic 20.0%
!!! CAAAAGTTTTTTATATTAGG+TGG - chr3_1:82345411-82345430 Msa0380590:intron 20.0%
!!! AAAGTTTTTTATATTAGGTG+GGG - chr3_1:82345413-82345432 Msa0380590:intron 20.0%
!!! ATTTGAAAATTTTGATCCAT+CGG + chr3_1:82345443-82345462 None:intergenic 20.0%
!! AAGCATTAAACAAAAATTTG+GGG + chr3_1:82345696-82345715 None:intergenic 20.0%
!!! GAAAGCATTAAACAAAAATT+TGG + chr3_1:82345698-82345717 None:intergenic 20.0%
!! AATAAACTCATAATTGCAAA+GGG + chr3_1:82345768-82345787 None:intergenic 20.0%
!! AAATAAACTCATAATTGCAA+AGG + chr3_1:82345769-82345788 None:intergenic 20.0%
!!! TTTAAAAAAGCACAAACAAT+TGG + chr3_1:82346169-82346188 None:intergenic 20.0%
!! AAAAAAAAAATTACGAGATC+AGG + chr3_1:82346653-82346672 None:intergenic 20.0%
!! ATGAAATTTCCAATGAAATT+TGG + chr3_1:82346705-82346724 None:intergenic 20.0%
!!! ATGCTTTTTATAGATACTAA+AGG + chr3_1:82347803-82347822 None:intergenic 20.0%
!! TGACTTATCTGAAAATAATA+GGG - chr3_1:82348374-82348393 Msa0380590:intron 20.0%
!!! AAAATATTTTTACAGTACCT+TGG - chr3_1:82348579-82348598 Msa0380590:intron 20.0%
!! ACTAGTATTAGAATAAATAG+GGG + chr3_1:82348731-82348750 None:intergenic 20.0%
!! TTAACTAAAATGTGAAGAAT+TGG + chr3_1:82349280-82349299 None:intergenic 20.0%
!! AATACAGATTCAATAAAATG+AGG + chr3_1:82349393-82349412 None:intergenic 20.0%
!! GGTATATTTAATCTTTTTGG+TGG + chr3_1:82343088-82343107 None:intergenic 25.0%
! GGGTAAAAACAATGAAAAAA+AGG + chr3_1:82343109-82343128 None:intergenic 25.0%
! TTGGTGAAGATAAATTGAAA+TGG + chr3_1:82343202-82343221 None:intergenic 25.0%
! TGCATTAAAATTTCACGAAA+CGG + chr3_1:82343529-82343548 None:intergenic 25.0%
!!! TTTCGTGAAATTTTAATGCA+TGG - chr3_1:82343529-82343548 Msa0380590:CDS 25.0%
!!! TGAAATTTTAATGCATGGTT+AGG - chr3_1:82343534-82343553 Msa0380590:CDS 25.0%
!!! GAAATTTTAATGCATGGTTA+GGG - chr3_1:82343535-82343554 Msa0380590:CDS 25.0%
! ATTAGATACAAGTTAACAGA+AGG + chr3_1:82343863-82343882 None:intergenic 25.0%
! AATTTAGGAAAATTAGTTCC+TGG - chr3_1:82343880-82343899 Msa0380590:intron 25.0%
!! TATGATACCTTTTCGATTTT+TGG - chr3_1:82344182-82344201 Msa0380590:intron 25.0%
! GATATTTCCAAAAATCGAAA+AGG + chr3_1:82344192-82344211 None:intergenic 25.0%
!!! AAGAACATTTTTGGAGAATA+TGG - chr3_1:82344455-82344474 Msa0380590:CDS 25.0%
!! GATGGTAAATCAAAATGTTT+TGG - chr3_1:82344512-82344531 Msa0380590:CDS 25.0%
! AAGCCCTAAAAAAATATGAA+AGG - chr3_1:82344627-82344646 Msa0380590:intron 25.0%
! AGCCCTAAAAAAATATGAAA+GGG - chr3_1:82344628-82344647 Msa0380590:intron 25.0%
!!! CTCCCTTTCATATTTTTTTA+GGG + chr3_1:82344633-82344652 None:intergenic 25.0%
! CAGCAATTACTAAATAAAGT+TGG + chr3_1:82344991-82345010 None:intergenic 25.0%
!!! TATAAAAAACTTTTGGGTTG+TGG + chr3_1:82345406-82345425 None:intergenic 25.0%
! AAATAGAGACAATTCATGAT+AGG + chr3_1:82345487-82345506 None:intergenic 25.0%
!!! ATCCAATAGTTCTAGATAAA+GGG + chr3_1:82345568-82345587 None:intergenic 25.0%
!!! AATCCAATAGTTCTAGATAA+AGG + chr3_1:82345569-82345588 None:intergenic 25.0%
!!! TTTAGATGGATTAAGAAATG+TGG + chr3_1:82345640-82345659 None:intergenic 25.0%
! TGGATCAATGTAGTAAAAAA+AGG + chr3_1:82345735-82345754 None:intergenic 25.0%
! ATAAACTCATAATTGCAAAG+GGG + chr3_1:82345767-82345786 None:intergenic 25.0%
! AAAGTACAAGTCATTCTTAA+AGG + chr3_1:82345858-82345877 None:intergenic 25.0%
! CAAAATGACATGGAATTAAA+GGG + chr3_1:82345936-82345955 None:intergenic 25.0%
! TCAAAATGACATGGAATTAA+AGG + chr3_1:82345937-82345956 None:intergenic 25.0%
! TCATTTGAGTAGAAGTAAAA+TGG + chr3_1:82346070-82346089 None:intergenic 25.0%
! TTTACTTCTACTCAAATGAA+AGG - chr3_1:82346071-82346090 Msa0380590:intron 25.0%
! GAAATGAAAAATTACAACTG+TGG + chr3_1:82346120-82346139 None:intergenic 25.0%
! AAACAAATTAGAAACTGACT+AGG + chr3_1:82346292-82346311 None:intergenic 25.0%
! TGAGAAAGAAAAAAGCAATT+GGG + chr3_1:82346549-82346568 None:intergenic 25.0%
! AAATTTGGCAAGAAATTCAA+TGG + chr3_1:82346690-82346709 None:intergenic 25.0%
! AATTTCTTGCCAAATTTCAT+TGG - chr3_1:82346693-82346712 Msa0380590:intron 25.0%
!!! AATGGTTTTGATCTTATGTT+TGG - chr3_1:82346991-82347010 Msa0380590:intron 25.0%
!!! ATGGTTTTGATCTTATGTTT+GGG - chr3_1:82346992-82347011 Msa0380590:intron 25.0%
!!! ATTTGTGGTACTGATTATTT+CGG - chr3_1:82347250-82347269 Msa0380590:intron 25.0%
!!! ATTTCGGGAATTTTGTTTTA+TGG - chr3_1:82347266-82347285 Msa0380590:intron 25.0%
!!! TTTCGGGAATTTTGTTTTAT+GGG - chr3_1:82347267-82347286 Msa0380590:intron 25.0%
!! CTAAAAGTATGTTTGCAAAA+TGG - chr3_1:82347482-82347501 Msa0380590:intron 25.0%
!! GCATGACAAAATTTTCAAAA+AGG - chr3_1:82347624-82347643 Msa0380590:intron 25.0%
!! ATTCTAGTGATTTTCTCATA+AGG - chr3_1:82347654-82347673 Msa0380590:intron 25.0%
! TGATCATTTCTATAAGGAAA+AGG - chr3_1:82348002-82348021 Msa0380590:intron 25.0%
! ATTTATCATCCCATAAAACA+TGG + chr3_1:82348115-82348134 None:intergenic 25.0%
! TTATCAGATTATCTTGTGAA+AGG - chr3_1:82348262-82348281 Msa0380590:intron 25.0%
! GTGACTTATCTGAAAATAAT+AGG - chr3_1:82348373-82348392 Msa0380590:intron 25.0%
!! TCTGAAAATAATAGGGTTTT+AGG - chr3_1:82348381-82348400 Msa0380590:intron 25.0%
! GATTAACATAAATGAGAGAA+GGG + chr3_1:82348508-82348527 None:intergenic 25.0%
! TGATTAACATAAATGAGAGA+AGG + chr3_1:82348509-82348528 None:intergenic 25.0%
!!! AATTTTTTTCACCTAGCTTA+TGG - chr3_1:82348951-82348970 Msa0380590:CDS 25.0%
!!! ATTTCCTTTTTTCTTTCTTC+TGG - chr3_1:82348977-82348996 Msa0380590:CDS 25.0%
ATTGACATAACCATAACCTA+GGG + chr3_1:82343466-82343485 None:intergenic 30.0%
AATTGACATAACCATAACCT+AGG + chr3_1:82343467-82343486 None:intergenic 30.0%
AAAAAAACTAACCGTCATGA+GGG + chr3_1:82343497-82343516 None:intergenic 30.0%
AAAAAAAACTAACCGTCATG+AGG + chr3_1:82343498-82343517 None:intergenic 30.0%
TGAGAATACATAATCCGAAT+CGG + chr3_1:82343681-82343700 None:intergenic 30.0%
! TGCTGCTAATATTTTCATCA+AGG - chr3_1:82343728-82343747 Msa0380590:intron 30.0%
TTTCCTATTCGTAAATGTCA+AGG + chr3_1:82343804-82343823 None:intergenic 30.0%
TTGAATTATGTCGAGTAACT+TGG - chr3_1:82343836-82343855 Msa0380590:CDS 30.0%
GTTAGTAAGTGATATAATCC+AGG + chr3_1:82343901-82343920 None:intergenic 30.0%
! AGTACTTTTGTTCACTTGTA+AGG + chr3_1:82343964-82343983 None:intergenic 30.0%
ATTCAACTCCTGAAATTGTA+GGG + chr3_1:82344036-82344055 None:intergenic 30.0%
TACAATTTCAGGAGTTGAAT+GGG - chr3_1:82344036-82344055 Msa0380590:CDS 30.0%
CAGATTCTTCATTCTCAAAT+TGG + chr3_1:82344271-82344290 None:intergenic 30.0%
AGTGCAATTGACAAGTTAAA+CGG - chr3_1:82344296-82344315 Msa0380590:intron 30.0%
! TGGAAAGAAATTTGATGACA+AGG - chr3_1:82344589-82344608 Msa0380590:intron 30.0%
!!! GCTCCCTTTCATATTTTTTT+AGG + chr3_1:82344634-82344653 None:intergenic 30.0%
! GAAACTGTTGACAAGTTTTA+TGG - chr3_1:82344689-82344708 Msa0380590:intron 30.0%
AAACTTGTATCTCAAGAACT+TGG - chr3_1:82344715-82344734 Msa0380590:intron 30.0%
ATTGCAGATATGAACAGAAA+GGG + chr3_1:82344824-82344843 None:intergenic 30.0%
AATTGCAGATATGAACAGAA+AGG + chr3_1:82344825-82344844 None:intergenic 30.0%
AGAAACATGAATTCATGCAT+TGG - chr3_1:82345213-82345232 Msa0380590:intron 30.0%
GAAACATGAATTCATGCATT+GGG - chr3_1:82345214-82345233 Msa0380590:intron 30.0%
TGATGAATCGTCATTAACAA+AGG + chr3_1:82345241-82345260 None:intergenic 30.0%
GACGATTCATCAATAATAGA+TGG - chr3_1:82345249-82345268 Msa0380590:intron 30.0%
!!! TTTTTTATATTAGGTGGGGT+TGG - chr3_1:82345417-82345436 Msa0380590:intron 30.0%
CTATTGGATTATCATCCATT+TGG - chr3_1:82345579-82345598 Msa0380590:intron 30.0%
TGCCATGATATATGATATGT+GGG + chr3_1:82345798-82345817 None:intergenic 30.0%
!!! TCCATGTCATTTTGAATGAT+AGG - chr3_1:82345942-82345961 Msa0380590:intron 30.0%
AGGCTCAAGATACTTAAAAT+TGG - chr3_1:82345962-82345981 Msa0380590:intron 30.0%
!! GATACTTAAAATTGGTCTTG+AGG - chr3_1:82345970-82345989 Msa0380590:intron 30.0%
! TGAAATGTACGTTTTACAAC+AGG + chr3_1:82346041-82346060 None:intergenic 30.0%
AAATGAAAGGTCAAATGCTT+TGG - chr3_1:82346084-82346103 Msa0380590:intron 30.0%
GTGAGAAAGAAAAAAGCAAT+TGG + chr3_1:82346550-82346569 None:intergenic 30.0%
GAAAATAGTAAAAACAAGCC+TGG + chr3_1:82346594-82346613 None:intergenic 30.0%
ATTCAATGGCATTTGTGAAA+AGG + chr3_1:82346676-82346695 None:intergenic 30.0%
!! TAACCATTTTTGGAAATGTG+TGG + chr3_1:82346764-82346783 None:intergenic 30.0%
TTCCAAAAATGGTTATTTGC+TGG - chr3_1:82346769-82346788 Msa0380590:intron 30.0%
TCCAAAAATGGTTATTTGCT+GGG - chr3_1:82346770-82346789 Msa0380590:intron 30.0%
AACCATTTCTCCATTTGAAA+CGG + chr3_1:82346978-82346997 None:intergenic 30.0%
!! GCAAAATTACTTTTGTCCAA+CGG + chr3_1:82347031-82347050 None:intergenic 30.0%
!! TTTGTGGTACTGATTATTTC+GGG - chr3_1:82347251-82347270 Msa0380590:intron 30.0%
CTATAGCGTCATTTATGTTT+GGG + chr3_1:82347447-82347466 None:intergenic 30.0%
TCTATAGCGTCATTTATGTT+TGG + chr3_1:82347448-82347467 None:intergenic 30.0%
CCAAAGTCATCAATATTTGT+AGG + chr3_1:82347578-82347597 None:intergenic 30.0%
! CCTACAAATATTGATGACTT+TGG - chr3_1:82347575-82347594 Msa0380590:intron 30.0%
! ATATTGATGACTTTGGTAGA+TGG - chr3_1:82347582-82347601 Msa0380590:intron 30.0%
CATATATGAAGTGTATAGCA+TGG - chr3_1:82347957-82347976 Msa0380590:intron 30.0%
GATGCATGATCATTTCTATA+AGG - chr3_1:82347996-82348015 Msa0380590:intron 30.0%
ATAAGGAAAAGGACTAGATA+TGG - chr3_1:82348013-82348032 Msa0380590:intron 30.0%
TAAGGAAAAGGACTAGATAT+GGG - chr3_1:82348014-82348033 Msa0380590:intron 30.0%
AAACATGGTATGTCTACTTT+GGG + chr3_1:82348100-82348119 None:intergenic 30.0%
AAAACATGGTATGTCTACTT+TGG + chr3_1:82348101-82348120 None:intergenic 30.0%
! AGTAGACATACCATGTTTTA+TGG - chr3_1:82348102-82348121 Msa0380590:intron 30.0%
! GTAGACATACCATGTTTTAT+GGG - chr3_1:82348103-82348122 Msa0380590:intron 30.0%
AATGATTCTGTAAACTCCAA+CGG + chr3_1:82348156-82348175 None:intergenic 30.0%
ATACCATCAATTTGACATAG+TGG - chr3_1:82348202-82348221 Msa0380590:intron 30.0%
TTTCCACTATGTCAAATTGA+TGG + chr3_1:82348208-82348227 None:intergenic 30.0%
! ACGTTTGGCATCTAATTTTA+AGG - chr3_1:82348612-82348631 Msa0380590:intron 30.0%
GGAAAAGAGATAATTAAGTG+TGG - chr3_1:82348633-82348652 Msa0380590:intron 30.0%
! AAGTGTGGTTTCTAATTTTG+AGG - chr3_1:82348648-82348667 Msa0380590:CDS 30.0%
!! CTAATTTTGAGGAAAAGAGA+TGG - chr3_1:82348659-82348678 Msa0380590:CDS 30.0%
GTATTAGAATAAATAGGGGT+TGG + chr3_1:82348727-82348746 None:intergenic 30.0%
AGATGTTCTAACATGAATAG+AGG - chr3_1:82348883-82348902 Msa0380590:CDS 30.0%
GATGTTCTAACATGAATAGA+GGG - chr3_1:82348884-82348903 Msa0380590:CDS 30.0%
ATGTTCTAACATGAATAGAG+GGG - chr3_1:82348885-82348904 Msa0380590:CDS 30.0%
TGTTCCAGAAGAAAGAAAAA+AGG + chr3_1:82348984-82349003 None:intergenic 30.0%
ATTGTTTATGCATTTCGTTC+AGG - chr3_1:82349003-82349022 Msa0380590:CDS 30.0%
ATGGGACAACAAATTATGTA+TGG - chr3_1:82349106-82349125 Msa0380590:CDS 30.0%
TGTAATTACCTGAGATATGA+AGG + chr3_1:82349146-82349165 None:intergenic 30.0%
AACTGAGCAATAATATATGC+AGG - chr3_1:82349417-82349436 Msa0380590:CDS 30.0%
!! TTGTTGAGATGCTTTTTGTT+GGG - chr3_1:82349676-82349695 Msa0380590:intron 30.0%
ATGAGAAAATAGTCAGAAAC+TGG + chr3_1:82349857-82349876 None:intergenic 30.0%
GGAATTGTTTAATGTGCATT+AGG - chr3_1:82349895-82349914 Msa0380590:CDS 30.0%
!! TACTGACTTTGTTTCATGAA+TGG - chr3_1:82349927-82349946 Msa0380590:CDS 30.0%
! TTCGTTTCCTTTTTACTACT+TGG - chr3_1:82350371-82350390 Msa0380590:five_prime_UTR 30.0%
! TCTTCACCAAAAACCGATTT+AGG - chr3_1:82343212-82343231 Msa0380590:three_prime_UTR 35.0%
! CTTCACCAAAAACCGATTTA+GGG - chr3_1:82343213-82343232 Msa0380590:three_prime_UTR 35.0%
!! GAAAACCCTAAATCGGTTTT+TGG + chr3_1:82343221-82343240 None:intergenic 35.0%
GCGAAATGAAAACCCTAAAT+CGG + chr3_1:82343228-82343247 None:intergenic 35.0%
AAGATCGTAAAGCTGTGAAT+CGG + chr3_1:82343382-82343401 None:intergenic 35.0%
! TACGATCTTTTCAACCAGAT+CGG - chr3_1:82343393-82343412 Msa0380590:exon 35.0%
AATTTCAGTAACCCTCATGA+CGG - chr3_1:82343483-82343502 Msa0380590:CDS 35.0%
TTTAATGCATGGTTAGGGTT+AGG - chr3_1:82343540-82343559 Msa0380590:CDS 35.0%
TCTATCAACAAGAGCAAATG+CGG + chr3_1:82343571-82343590 None:intergenic 35.0%
CATCCTTGACATTTACGAAT+AGG - chr3_1:82343798-82343817 Msa0380590:CDS 35.0%
!! GAACAAAAGTACTGAGTTCT+TGG - chr3_1:82343971-82343990 Msa0380590:intron 35.0%
TTCAACTCCTGAAATTGTAG+GGG + chr3_1:82344035-82344054 None:intergenic 35.0%
CATTCAACTCCTGAAATTGT+AGG + chr3_1:82344037-82344056 None:intergenic 35.0%
CTACAATTTCAGGAGTTGAA+TGG - chr3_1:82344035-82344054 Msa0380590:CDS 35.0%
!! TTTTATGATGATGCAGAACC+TGG - chr3_1:82344133-82344152 Msa0380590:CDS 35.0%
TGTGAAAAACCTATCAGAGT+CGG - chr3_1:82344415-82344434 Msa0380590:intron 35.0%
! GACGACTTGAAGAACATTTT+TGG - chr3_1:82344446-82344465 Msa0380590:intron 35.0%
GTAGTAATGAGAGATGTAGA+TGG - chr3_1:82344494-82344513 Msa0380590:CDS 35.0%
! AGAAATTTGATGACAAGGAG+TGG - chr3_1:82344594-82344613 Msa0380590:intron 35.0%
TGAAGTTACTGTACCAAACT+CGG + chr3_1:82344780-82344799 None:intergenic 35.0%
TTGCAGATATGAACAGAAAG+GGG + chr3_1:82344823-82344842 None:intergenic 35.0%
AAAAGGAAGAGAGAAAAGCA+AGG - chr3_1:82345114-82345133 Msa0380590:intron 35.0%
ACAATTCATGATAGGACGAT+AGG + chr3_1:82345479-82345498 None:intergenic 35.0%
! CACCCTTTATCTAGAACTAT+TGG - chr3_1:82345563-82345582 Msa0380590:intron 35.0%
GGTAAAGTCGTTAAACCAAA+TGG + chr3_1:82345597-82345616 None:intergenic 35.0%
GTTGGCAAAGTAACTTTAGA+TGG + chr3_1:82345654-82345673 None:intergenic 35.0%
GTCCCACATATCATATATCA+TGG - chr3_1:82345793-82345812 Msa0380590:intron 35.0%
CTGCCATGATATATGATATG+TGG + chr3_1:82345799-82345818 None:intergenic 35.0%
CACATATCATATATCATGGC+AGG - chr3_1:82345797-82345816 Msa0380590:intron 35.0%
GCCTATCATTCAAAATGACA+TGG + chr3_1:82345946-82345965 None:intergenic 35.0%
! TCCAATTTTCACCTCTAGTT+TGG - chr3_1:82346005-82346024 Msa0380590:intron 35.0%
TCCAAACTAGAGGTGAAAAT+TGG + chr3_1:82346009-82346028 None:intergenic 35.0%
GCATACAAATTCCAAACTAG+AGG + chr3_1:82346019-82346038 None:intergenic 35.0%
TTTCCTTTGACTATCCAACA+AGG - chr3_1:82346136-82346155 Msa0380590:intron 35.0%
AACCAAACTGCTAGAATGAA+TGG - chr3_1:82346336-82346355 Msa0380590:intron 35.0%
AATAGTAAAAACAAGCCTGG+AGG + chr3_1:82346591-82346610 None:intergenic 35.0%
TTACGAGATCAGGAAAAAAG+TGG + chr3_1:82346643-82346662 None:intergenic 35.0%
TGACCACACATTTCCAAAAA+TGG - chr3_1:82346758-82346777 Msa0380590:intron 35.0%
! CCAAAAATGGTTATTTGCTG+GGG - chr3_1:82346771-82346790 Msa0380590:intron 35.0%
! CAAAAATGGTTATTTGCTGG+GGG - chr3_1:82346772-82346791 Msa0380590:intron 35.0%
ATGAAATGCCCTGTATCAAA+AGG - chr3_1:82346806-82346825 Msa0380590:intron 35.0%
! TCACATGTCCTTTTGATACA+GGG + chr3_1:82346817-82346836 None:intergenic 35.0%
! TTCACATGTCCTTTTGATAC+AGG + chr3_1:82346818-82346837 None:intergenic 35.0%
CTTGAGTGGTGAATAATACA+CGG - chr3_1:82346908-82346927 Msa0380590:intron 35.0%
ATCCGTTTCAAATGGAGAAA+TGG - chr3_1:82346973-82346992 Msa0380590:intron 35.0%
!! TTTTGTCCAACGGATTTTAG+AGG + chr3_1:82347021-82347040 None:intergenic 35.0%
!! AGCACAATTGTTACTTTCAC+TGG - chr3_1:82347076-82347095 Msa0380590:intron 35.0%
! CAGAACTTATGGAGCTTTTA+CGG + chr3_1:82347124-82347143 None:intergenic 35.0%
TTGGTGAGGAAATAACTAGA+TGG - chr3_1:82347330-82347349 Msa0380590:intron 35.0%
! TGACATAGTGGAAAGACTAA+AGG - chr3_1:82348214-82348233 Msa0380590:intron 35.0%
! GACATAGTGGAAAGACTAAA+GGG - chr3_1:82348215-82348234 Msa0380590:intron 35.0%
CTGATAATTTGACCATCACT+TGG + chr3_1:82348249-82348268 None:intergenic 35.0%
!!! AATAGGGTTTTAGGTAGTGT+AGG - chr3_1:82348390-82348409 Msa0380590:intron 35.0%
AAGGAAATAAGCCATAAGCT+AGG + chr3_1:82348965-82348984 None:intergenic 35.0%
! GAAGATCTCAATGTTTTCTG+CGG - chr3_1:82349221-82349240 Msa0380590:CDS 35.0%
TAATATATGCAGGCTGGATT+TGG - chr3_1:82349427-82349446 Msa0380590:CDS 35.0%
TCTGGTCATGCATTATATCT+GGG - chr3_1:82349617-82349636 Msa0380590:intron 35.0%
!! ACAAAAAGCATCTCAACAAC+AGG + chr3_1:82349675-82349694 None:intergenic 35.0%
!! GTTGTTGAGATGCTTTTTGT+TGG - chr3_1:82349675-82349694 Msa0380590:intron 35.0%
!! GATTTTTAGATGCATCCAAG+AGG - chr3_1:82349698-82349717 Msa0380590:intron 35.0%
! GACTATTTTCTCATCCCATT+TGG - chr3_1:82349863-82349882 Msa0380590:CDS 35.0%
ATTCCGTACTCAATCCAAAT+GGG + chr3_1:82349880-82349899 None:intergenic 35.0%
AATTCCGTACTCAATCCAAA+TGG + chr3_1:82349881-82349900 None:intergenic 35.0%
! TGAATGGATTCATAGATGCT+TGG - chr3_1:82349943-82349962 Msa0380590:CDS 35.0%
AACATTTCTCAACACATCCA+CGG + chr3_1:82350109-82350128 None:intergenic 35.0%
TTCAAAGAACGCATGTATCT+CGG + chr3_1:82350222-82350241 None:intergenic 35.0%
CCAGTAACCAAGTAGTAAAA+AGG + chr3_1:82350381-82350400 None:intergenic 35.0%
! CCTTTTTACTACTTGGTTAC+TGG - chr3_1:82350378-82350397 Msa0380590:five_prime_UTR 35.0%
TACTACTTGGTTACTGGATT+TGG - chr3_1:82350384-82350403 Msa0380590:five_prime_UTR 35.0%
! GTCTGTTTGACTTTGTTTCT+AGG - chr3_1:82350406-82350425 Msa0380590:five_prime_UTR 35.0%
ACGTTTCAATCTCCGAACAA+TGG - chr3_1:82343254-82343273 Msa0380590:three_prime_UTR 40.0%
!! TCGGTCAAGTTGTTTCTGTT+CGG - chr3_1:82343412-82343431 Msa0380590:CDS 40.0%
!! TTGTTTCTGTTCGGATCTGT+AGG - chr3_1:82343421-82343440 Msa0380590:CDS 40.0%
! TGTTTCTGTTCGGATCTGTA+GGG - chr3_1:82343422-82343441 Msa0380590:CDS 40.0%
TCTCAACAATCCCTAGGTTA+TGG - chr3_1:82343453-82343472 Msa0380590:CDS 40.0%
! TGACTGTTTTACAGCTGCAA+AGG - chr3_1:82343617-82343636 Msa0380590:CDS 40.0%
!! AATCGGTTTGTTGTTCAGTG+GGG + chr3_1:82343664-82343683 None:intergenic 40.0%
!! GAATCGGTTTGTTGTTCAGT+GGG + chr3_1:82343665-82343684 None:intergenic 40.0%
CACTGAACAACAAACCGATT+CGG - chr3_1:82343664-82343683 Msa0380590:intron 40.0%
!! TTTCGCCCTCTGAAATTGTA+GGG - chr3_1:82343764-82343783 Msa0380590:CDS 40.0%
CCTAACCCTACAATTTCAGA+GGG + chr3_1:82343772-82343791 None:intergenic 40.0%
TTTCTGACCCCTACAATTTC+AGG - chr3_1:82344025-82344044 Msa0380590:CDS 40.0%
CCATTGCTATCTTGCAAGAA+AGG + chr3_1:82344214-82344233 None:intergenic 40.0%
CCTTTCTTGCAAGATAGCAA+TGG - chr3_1:82344211-82344230 Msa0380590:intron 40.0%
AAGATAGCAATGGATGCTTC+TGG - chr3_1:82344221-82344240 Msa0380590:intron 40.0%
TCTACGTTGGTCATTTCCAA+AGG - chr3_1:82344342-82344361 Msa0380590:intron 40.0%
TATCTCTATCCTGCTTCCTT+TGG + chr3_1:82344361-82344380 None:intergenic 40.0%
AAGACATGAGCAGAGTATGA+AGG - chr3_1:82344667-82344686 Msa0380590:intron 40.0%
TGGTACAGTAACTTCATGCA+AGG - chr3_1:82344784-82344803 Msa0380590:intron 40.0%
CTTCATGCAAGGTGTGAATA+CGG - chr3_1:82344795-82344814 Msa0380590:intron 40.0%
AGATCCACAGGGAATTAGTA+GGG - chr3_1:82344900-82344919 Msa0380590:intron 40.0%
TGCTGAGATGAATGGCAAAA+TGG - chr3_1:82345055-82345074 Msa0380590:intron 40.0%
GATGAATGGCAAAATGGTTG+CGG - chr3_1:82345061-82345080 Msa0380590:intron 40.0%
ATGAATGGCAAAATGGTTGC+GGG - chr3_1:82345062-82345081 Msa0380590:intron 40.0%
AGAGAGAAAAGCAAGGTTAC+AGG - chr3_1:82345121-82345140 Msa0380590:intron 40.0%
CAGGTAATATTGCGCAACAA+TGG - chr3_1:82345140-82345159 Msa0380590:intron 40.0%
CTTTATAATTACAGCGCGTG+TGG - chr3_1:82345182-82345201 Msa0380590:intron 40.0%
GTTTAGTCGATAGTTTCCCT+TGG - chr3_1:82345539-82345558 Msa0380590:intron 40.0%
TCTAGATAAAGGGTGACCAA+GGG + chr3_1:82345558-82345577 None:intergenic 40.0%
TTCTAGATAAAGGGTGACCA+AGG + chr3_1:82345559-82345578 None:intergenic 40.0%
!! GACTTTACCTGTGTTTCTAG+TGG - chr3_1:82345608-82345627 Msa0380590:intron 40.0%
GATAAGACCACTAGAAACAC+AGG + chr3_1:82345618-82345637 None:intergenic 40.0%
! AACATCAGTGGTGGAAAAGT+TGG + chr3_1:82345672-82345691 None:intergenic 40.0%
! AAAATTTGGGGCAACATCAG+TGG + chr3_1:82345684-82345703 None:intergenic 40.0%
TGTGCCATAGGATTCAAGAA+GGG + chr3_1:82345912-82345931 None:intergenic 40.0%
TTGTGCCATAGGATTCAAGA+AGG + chr3_1:82345913-82345932 None:intergenic 40.0%
GAATTAAAGGGTTGTGCCAT+AGG + chr3_1:82345924-82345943 None:intergenic 40.0%
AGTCCTTGTTGGATAGTCAA+AGG + chr3_1:82346142-82346161 None:intergenic 40.0%
TTTGACTATCCAACAAGGAC+TGG - chr3_1:82346141-82346160 Msa0380590:intron 40.0%
TTGACTATCCAACAAGGACT+GGG - chr3_1:82346142-82346161 Msa0380590:intron 40.0%
ACCATTCACAAAATGACACG+TGG - chr3_1:82346256-82346275 Msa0380590:intron 40.0%
!!! TCCACGTGTCATTTTGTGAA+TGG + chr3_1:82346260-82346279 None:intergenic 40.0%
! CAAAATGACACGTGGACTAT+TGG - chr3_1:82346264-82346283 Msa0380590:intron 40.0%
AAACTGCTAGAATGAATGGC+CGG - chr3_1:82346340-82346359 Msa0380590:intron 40.0%
AACACTGTACAGTTGCAAGT+GGG - chr3_1:82346454-82346473 Msa0380590:intron 40.0%
CAGGAAGCAATTAGAAGTCA+CGG + chr3_1:82346519-82346538 None:intergenic 40.0%
AAAAACAAGCCTGGAGGAAT+AGG + chr3_1:82346585-82346604 None:intergenic 40.0%
GAGATCAGGAAAAAAGTGGA+TGG + chr3_1:82346639-82346658 None:intergenic 40.0%
! CCCCAGCAAATAACCATTTT+TGG + chr3_1:82346774-82346793 None:intergenic 40.0%
AAGGACATGTGAAGCAGTAT+AGG - chr3_1:82346825-82346844 Msa0380590:intron 40.0%
! TCCACATGTCATTTCTTGAG+TGG - chr3_1:82346894-82346913 Msa0380590:intron 40.0%
ACCACTCAAGAAATGACATG+TGG + chr3_1:82346898-82346917 None:intergenic 40.0%
CACTAAGCATCCGTTTCAAA+TGG - chr3_1:82346965-82346984 Msa0380590:intron 40.0%
ACGGTTGGAGAAAATAACGA+GGG + chr3_1:82347105-82347124 None:intergenic 40.0%
TACGGTTGGAGAAAATAACG+AGG + chr3_1:82347106-82347125 None:intergenic 40.0%
! ACTTATGGAGCTTTTACGGT+TGG + chr3_1:82347120-82347139 None:intergenic 40.0%
TTAAGCCACTGCAGAACTTA+TGG + chr3_1:82347135-82347154 None:intergenic 40.0%
GCTCTTGTGTAAGACATTTG+TGG - chr3_1:82347235-82347254 Msa0380590:intron 40.0%
TGACAGTACTAGATGGCATT+GGG - chr3_1:82347292-82347311 Msa0380590:intron 40.0%
! TAGATGGCATTGGGTTCATT+GGG - chr3_1:82347301-82347320 Msa0380590:intron 40.0%
TGGGTTCATTGGGTTTGATT+TGG - chr3_1:82347311-82347330 Msa0380590:intron 40.0%
!! TCATTGGGTTTGATTTGGTG+AGG - chr3_1:82347316-82347335 Msa0380590:intron 40.0%
TACACACTTGACAGTACTCT+AGG - chr3_1:82347387-82347406 Msa0380590:intron 40.0%
! AAAAGCATGCAACGATGTTG+TGG - chr3_1:82347815-82347834 Msa0380590:intron 40.0%
ATGAAGTGTATAGCATGGCA+TGG - chr3_1:82347962-82347981 Msa0380590:intron 40.0%
AGTGGAAAGACTAAAGGGAT+TGG - chr3_1:82348220-82348239 Msa0380590:intron 40.0%
TTATCTTGTGAAAGGAGAGC+AGG - chr3_1:82348270-82348289 Msa0380590:intron 40.0%
GTAGTGTAGGAAAAGCAAGA+TGG - chr3_1:82348403-82348422 Msa0380590:intron 40.0%
AAGCAAGATGGATGAGACTT+TGG - chr3_1:82348415-82348434 Msa0380590:intron 40.0%
!! ATAATTTGTTGTCCCATCCC+AGG + chr3_1:82349103-82349122 None:intergenic 40.0%
ATTACCTGAGATATGAAGGC+TGG + chr3_1:82349142-82349161 None:intergenic 40.0%
! TGTTTTCTGCGGATGAAACA+TGG - chr3_1:82349232-82349251 Msa0380590:CDS 40.0%
ATTTCAGCAGTATGTGCCAT+AGG - chr3_1:82349317-82349336 Msa0380590:CDS 40.0%
GAGCAATAATATATGCAGGC+TGG - chr3_1:82349421-82349440 Msa0380590:CDS 40.0%
CATGAAGAAGTTTGGCATTG+GGG + chr3_1:82349494-82349513 None:intergenic 40.0%
GCATGAAGAAGTTTGGCATT+GGG + chr3_1:82349495-82349514 None:intergenic 40.0%
GCATCATTGGCAATGAATGT+GGG + chr3_1:82349588-82349607 None:intergenic 40.0%
TGCATCATTGGCAATGAATG+TGG + chr3_1:82349589-82349608 None:intergenic 40.0%
GTCTGGTCATGCATTATATC+TGG - chr3_1:82349616-82349635 Msa0380590:intron 40.0%
CATCCCATTTGGATTGAGTA+CGG - chr3_1:82349874-82349893 Msa0380590:CDS 40.0%
GCTCAATCTTCTCTACTAGA+GGG + chr3_1:82349981-82350000 None:intergenic 40.0%
TGCTCAATCTTCTCTACTAG+AGG + chr3_1:82349982-82350001 None:intergenic 40.0%
! AAAGGTTACTGGGATGCTTT+TGG - chr3_1:82350014-82350033 Msa0380590:intron 40.0%
TCTCAAGACTAAAGTTGCTG+AGG - chr3_1:82350083-82350102 Msa0380590:intron 40.0%
GAGAAGCTAGTTGATCAGTT+GGG + chr3_1:82350152-82350171 None:intergenic 40.0%
AGAGAAGCTAGTTGATCAGT+TGG + chr3_1:82350153-82350172 None:intergenic 40.0%
!! ACGTAACAGTTTTGTGCTTC+TGG - chr3_1:82350287-82350306 Msa0380590:CDS 40.0%
!!! GTTTTGTGCTTCTGGCTTTT+TGG - chr3_1:82350295-82350314 Msa0380590:CDS 40.0%
!! GTAGGATTAGCGATTTTCCT+TGG - chr3_1:82350317-82350336 Msa0380590:exon 40.0%
GCAATATGCTAGCTAATCCA+AGG + chr3_1:82350337-82350356 None:intergenic 40.0%
TATGCTTGAAATCTGCTGTC+TGG - chr3_1:82350453-82350472 Msa0380590:five_prime_UTR 40.0%
ATGCTTGAAATCTGCTGTCT+GGG - chr3_1:82350454-82350473 Msa0380590:five_prime_UTR 40.0%
TGGGTTGTGAAGTCATGAAA+AGG - chr3_1:82350473-82350492 Msa0380590:five_prime_UTR 40.0%
! CATGCACAATGTTGGCTGTT+CGG + chr3_1:82343060-82343079 None:intergenic 45.0%
! GAACAATGTAGTAGCGGAAG+TGG + chr3_1:82343136-82343155 None:intergenic 45.0%
TTCCGCTACTACATTGTTCG+CGG - chr3_1:82343137-82343156 Msa0380590:three_prime_UTR 45.0%
! CGTGATTTTGCGCCATTGTT+CGG + chr3_1:82343269-82343288 None:intergenic 45.0%
CGAGAATGTGAACAATGACG+TGG - chr3_1:82343287-82343306 Msa0380590:three_prime_UTR 45.0%
GAATGTGAACAATGACGTGG+CGG - chr3_1:82343290-82343309 Msa0380590:three_prime_UTR 45.0%
! GTTGTCAGATGATTCGGAAC+CGG + chr3_1:82343321-82343340 None:intergenic 45.0%
GACGTCGTTGTCAGATGATT+CGG + chr3_1:82343327-82343346 None:intergenic 45.0%
CAGAAACAACTTGACCGATC+TGG + chr3_1:82343410-82343429 None:intergenic 45.0%
TGTTCGGATCTGTAGGGATT+TGG - chr3_1:82343428-82343447 Msa0380590:CDS 45.0%
TTGGCTTCTCAACAATCCCT+AGG - chr3_1:82343447-82343466 Msa0380590:CDS 45.0%
! TTTTACAGCTGCAAAGGCGA+TGG - chr3_1:82343623-82343642 Msa0380590:CDS 45.0%
!! CGAATCGGTTTGTTGTTCAG+TGG + chr3_1:82343666-82343685 None:intergenic 45.0%
!! GTTTCGCCCTCTGAAATTGT+AGG - chr3_1:82343763-82343782 Msa0380590:CDS 45.0%
!! CCCTCTGAAATTGTAGGGTT+AGG - chr3_1:82343769-82343788 Msa0380590:CDS 45.0%
GCCTAACCCTACAATTTCAG+AGG + chr3_1:82343773-82343792 None:intergenic 45.0%
TATGATCAATTGCCCTGTCC+AGG + chr3_1:82344154-82344173 None:intergenic 45.0%
GATGCTTCTGGTCTGTCTAA+AGG - chr3_1:82344233-82344252 Msa0380590:intron 45.0%
TCTGGTCTGTCTAAAGGCTA+CGG - chr3_1:82344239-82344258 Msa0380590:intron 45.0%
CATGCTGCTCAACGATAAAC+CGG - chr3_1:82344319-82344338 Msa0380590:intron 45.0%
AACGATAAACCGGTCTACGT+TGG - chr3_1:82344329-82344348 Msa0380590:intron 45.0%
TGGAAATGACCAACGTAGAC+CGG + chr3_1:82344341-82344360 None:intergenic 45.0%
TGGTCATTTCCAAAGGAAGC+AGG - chr3_1:82344349-82344368 Msa0380590:intron 45.0%
! CATCTGTAACCGACTCTGAT+AGG + chr3_1:82344427-82344446 None:intergenic 45.0%
GATGACAAGGAGTGGTATGT+TGG - chr3_1:82344602-82344621 Msa0380590:intron 45.0%
GAGATCCACAGGGAATTAGT+AGG - chr3_1:82344899-82344918 Msa0380590:intron 45.0%
GATCCACAGGGAATTAGTAG+GGG - chr3_1:82344901-82344920 Msa0380590:intron 45.0%
!! TCGTAGCTTGCTGAGATGAA+TGG - chr3_1:82345047-82345066 Msa0380590:intron 45.0%
TGAGCAGGAGCAACATAAAG+AGG + chr3_1:82345092-82345111 None:intergenic 45.0%
TGTTGCTCCTGCTCAGAAAA+AGG - chr3_1:82345097-82345116 Msa0380590:intron 45.0%
! CTCTCTTCCTTTTTCTGAGC+AGG + chr3_1:82345107-82345126 None:intergenic 45.0%
TGTGCCCTTCTTGAATCCTA+TGG - chr3_1:82345905-82345924 Msa0380590:intron 45.0%
GAATGGTGAACAGTACACAC+TGG + chr3_1:82346243-82346262 None:intergenic 45.0%
GGCCATTCATTCTAGCAGTT+TGG + chr3_1:82346341-82346360 None:intergenic 45.0%
GAACACTGTACAGTTGCAAG+TGG - chr3_1:82346453-82346472 Msa0380590:intron 45.0%
TAGAAGTCACGGACAGCAAA+GGG + chr3_1:82346508-82346527 None:intergenic 45.0%
TTAGAAGTCACGGACAGCAA+AGG + chr3_1:82346509-82346528 None:intergenic 45.0%
!! AAAGCAATTGGGTGTTGAGC+AGG + chr3_1:82346538-82346557 None:intergenic 45.0%
! AAATGGTTATTTGCTGGGGG+TGG - chr3_1:82346775-82346794 Msa0380590:intron 45.0%
! AATGGTTATTTGCTGGGGGT+GGG - chr3_1:82346776-82346795 Msa0380590:intron 45.0%
AAAACACTGCAACACCGTCT+CGG + chr3_1:82346861-82346880 None:intergenic 45.0%
GAGTGGTGAATAATACACGG+AGG - chr3_1:82346911-82346930 Msa0380590:intron 45.0%
!! GGGTTACCTCTAAAATCCGT+TGG - chr3_1:82347012-82347031 Msa0380590:intron 45.0%
!! GTGCTGCTTCTTTGTGAATG+TGG + chr3_1:82347061-82347080 None:intergenic 45.0%
AAGCTCCATAAGTTCTGCAG+TGG - chr3_1:82347127-82347146 Msa0380590:intron 45.0%
ATGGGTCTGACAGTACTAGA+TGG - chr3_1:82347285-82347304 Msa0380590:intron 45.0%
CTGACAGTACTAGATGGCAT+TGG - chr3_1:82347291-82347310 Msa0380590:intron 45.0%
! CTAGATGGCATTGGGTTCAT+TGG - chr3_1:82347300-82347319 Msa0380590:intron 45.0%
TCATGTTGTATACGCACCGT+TGG - chr3_1:82348137-82348156 Msa0380590:intron 45.0%
! AGGGATTGGTATCCAAGTGA+TGG - chr3_1:82348234-82348253 Msa0380590:intron 45.0%
CAAACGTAAGAGATCAGCCA+AGG + chr3_1:82348599-82348618 None:intergenic 45.0%
CTTGGCTGATCTCTTACGTT+TGG - chr3_1:82348597-82348616 Msa0380590:intron 45.0%
! AGGCACAATTTTCGCAAGTG+AGG - chr3_1:82349023-82349042 Msa0380590:CDS 45.0%
! ACAATTTTCGCAAGTGAGGC+CGG - chr3_1:82349027-82349046 Msa0380590:CDS 45.0%
GCAATAGGAGCCATTGTAAC+CGG + chr3_1:82349049-82349068 None:intergenic 45.0%
AATGGCATTCGAGGTGCAAT+AGG + chr3_1:82349064-82349083 None:intergenic 45.0%
! GCCATAGGTTCTGATGTATC+TGG - chr3_1:82349332-82349351 Msa0380590:CDS 45.0%
GCCAGATACATCAGAACCTA+TGG + chr3_1:82349336-82349355 None:intergenic 45.0%
GGCATGAAGAAGTTTGGCAT+TGG + chr3_1:82349496-82349515 None:intergenic 45.0%
ACCATGGGCATGAAGAAGTT+TGG + chr3_1:82349502-82349521 None:intergenic 45.0%
GAATGTGGGAGTTGTTGCAT+AGG + chr3_1:82349574-82349593 None:intergenic 45.0%
ATTGCCAATGATGCAGCAAC+AGG - chr3_1:82349594-82349613 Msa0380590:intron 45.0%
TATCGATAGACACGTCCTCT+TGG + chr3_1:82349716-82349735 None:intergenic 45.0%
CGTGTCTATCGATATCCTTC+TGG - chr3_1:82349722-82349741 Msa0380590:intron 45.0%
!! TTCAGGAGGAGCATTTGCAA+GGG + chr3_1:82349816-82349835 None:intergenic 45.0%
GTAGAGAAGATTGAGCATGC+TGG - chr3_1:82349985-82350004 Msa0380590:intron 45.0%
!! TACTGGGATGCTTTTGGAGA+TGG - chr3_1:82350020-82350039 Msa0380590:intron 45.0%
TCAATCAGATGCAACACCTC+AGG + chr3_1:82350051-82350070 None:intergenic 45.0%
!! ACTTTAGTCTTGAGAGCCTC+TGG + chr3_1:82350078-82350097 None:intergenic 45.0%
TCTCGGTAAACTGTCATGCA+GGG + chr3_1:82350205-82350224 None:intergenic 45.0%
ATCTCGGTAAACTGTCATGC+AGG + chr3_1:82350206-82350225 None:intergenic 45.0%
!! ACGTTACAGTTTTGTGCGTC+TGG - chr3_1:82350241-82350260 Msa0380590:CDS 45.0%
!!! GTTTTGTGCGTCTGGCTTTT+TGG - chr3_1:82350249-82350268 Msa0380590:CDS 45.0%
!!! TGTGCTTCTGGCTTTTTGGT+AGG - chr3_1:82350299-82350318 Msa0380590:CDS 45.0%
!!! AAAAGTTATAATATTTTTTT+TGG + chr3_1:82347759-82347778 None:intergenic 5.0%
! TGTAGTAGCGGAAGTGGAGA+GGG + chr3_1:82343130-82343149 None:intergenic 50.0%
! ATGTAGTAGCGGAAGTGGAG+AGG + chr3_1:82343131-82343150 None:intergenic 50.0%
CTCCGCGAACAATGTAGTAG+CGG + chr3_1:82343142-82343161 None:intergenic 50.0%
CTACTACATTGTTCGCGGAG+CGG - chr3_1:82343142-82343161 Msa0380590:three_prime_UTR 50.0%
TACTACATTGTTCGCGGAGC+GGG - chr3_1:82343143-82343162 Msa0380590:three_prime_UTR 50.0%
ACAACGACGTCGTTGTACGT+CGG - chr3_1:82343336-82343355 Msa0380590:three_prime_UTR 50.0%
CACCACTCTTCCGAACACTA+GGG + chr3_1:82343710-82343729 None:intergenic 50.0%
! TGATGATGCAGAACCTGGAC+AGG - chr3_1:82344138-82344157 Msa0380590:CDS 50.0%
GATGATGCAGAACCTGGACA+GGG - chr3_1:82344139-82344158 Msa0380590:CDS 50.0%
CTTTCCATTGAGTGCCTCCA+CGG + chr3_1:82344576-82344595 None:intergenic 50.0%
AGCGAACTGTTCTCCGAGTT+TGG - chr3_1:82344764-82344783 Msa0380590:intron 50.0%
TGTGGATCTCGCAGAATCTG+TGG + chr3_1:82344889-82344908 None:intergenic 50.0%
ACAGATTCTGCGAGATCCAC+AGG - chr3_1:82344888-82344907 Msa0380590:intron 50.0%
CAGATTCTGCGAGATCCACA+GGG - chr3_1:82344889-82344908 Msa0380590:intron 50.0%
GATCCCCTACTAATTCCCTG+TGG + chr3_1:82344907-82344926 None:intergenic 50.0%
CAGGGAATTAGTAGGGGATC+TGG - chr3_1:82344907-82344926 Msa0380590:intron 50.0%
! TGTTGCCTTTTCAACTCCCG+AGG - chr3_1:82344933-82344952 Msa0380590:intron 50.0%
TGCTTCCTCGGGAGTTGAAA+AGG + chr3_1:82344941-82344960 None:intergenic 50.0%
TACAGCACGAGTTGCTTCCT+CGG + chr3_1:82344953-82344972 None:intergenic 50.0%
! ATTTGGGGCAACATCAGTGG+TGG + chr3_1:82345681-82345700 None:intergenic 50.0%
CAATTGGTCCCAGTCCTTGT+TGG + chr3_1:82346153-82346172 None:intergenic 50.0%
AGGTCGTCACAAATGGCTCA+CGG - chr3_1:82346389-82346408 Msa0380590:intron 50.0%
!! ACAAATGGCTCACGGGTTAG+AGG - chr3_1:82346397-82346416 Msa0380590:intron 50.0%
CAACACTCCAAGTGTAGCGA+CGG + chr3_1:82346431-82346450 None:intergenic 50.0%
AGAAGTCACGGACAGCAAAG+GGG + chr3_1:82346507-82346526 None:intergenic 50.0%
GAGGAATAGGACGGAGAACA+AGG + chr3_1:82346572-82346591 None:intergenic 50.0%
ACAAGCCTGGAGGAATAGGA+CGG + chr3_1:82346581-82346600 None:intergenic 50.0%
TAGGTCATACTCAGCCGAGA+CGG - chr3_1:82346844-82346863 Msa0380590:intron 50.0%
GCAGGGTAAAATGGCATTCG+AGG + chr3_1:82349073-82349092 None:intergenic 50.0%
!!! CGAATGCCATTTTACCCTGC+TGG - chr3_1:82349073-82349092 Msa0380590:CDS 50.0%
GGAACACCAGCAGGGTAAAA+TGG + chr3_1:82349082-82349101 None:intergenic 50.0%
! TTTTACCCTGCTGGTGTTCC+TGG - chr3_1:82349082-82349101 Msa0380590:CDS 50.0%
TTTACCCTGCTGGTGTTCCT+GGG - chr3_1:82349083-82349102 Msa0380590:CDS 50.0%
ATATGAAGGCTGGAGGAGCT+TGG + chr3_1:82349132-82349151 None:intergenic 50.0%
TCCTCCAGCCTTCATATCTC+AGG - chr3_1:82349135-82349154 Msa0380590:CDS 50.0%
ACCTGAGATATGAAGGCTGG+AGG + chr3_1:82349139-82349158 None:intergenic 50.0%
ATTTGGTTACCCGCAGCAAC+TGG - chr3_1:82349444-82349463 Msa0380590:intron 50.0%
ATTCCAGGAACCAGTTGCTG+CGG + chr3_1:82349457-82349476 None:intergenic 50.0%
GCCAAACTTCTTCATGCCCA+TGG - chr3_1:82349498-82349517 Msa0380590:intron 50.0%
TTCATGCCCATGGTTCAGCA+GGG - chr3_1:82349508-82349527 Msa0380590:intron 50.0%
CAGACCTGTTGCTGCATCAT+TGG + chr3_1:82349601-82349620 None:intergenic 50.0%
CAATGATGCAGCAACAGGTC+TGG - chr3_1:82349599-82349618 Msa0380590:intron 50.0%
! CTGGCATCGGAATACCTTGT+GGG + chr3_1:82349754-82349773 None:intergenic 50.0%
!! GTTCAGGAGGAGCATTTGCA+AGG + chr3_1:82349817-82349836 None:intergenic 50.0%
CTTACAGTCCTCTGCTGTTC+AGG + chr3_1:82349833-82349852 None:intergenic 50.0%
CTGGAGCTGCAAAGGTTACT+GGG - chr3_1:82350004-82350023 Msa0380590:intron 50.0%
GCATCTGATTGAGTCACCAG+AGG - chr3_1:82350059-82350078 Msa0380590:intron 50.0%
!!! TGTGCGTCTGGCTTTTTGGT+AGG - chr3_1:82350253-82350272 Msa0380590:CDS 50.0%
TGGCAGCGCATGCACAATGT+TGG + chr3_1:82343068-82343087 None:intergenic 55.0%
! GTAGTAGCGGAAGTGGAGAG+GGG + chr3_1:82343129-82343148 None:intergenic 55.0%
TGTGAACAATGACGTGGCGG+CGG - chr3_1:82343293-82343312 Msa0380590:three_prime_UTR 55.0%
CTCATCGCGACCCTAGTGTT+CGG - chr3_1:82343697-82343716 Msa0380590:intron 55.0%
GACCCTAGTGTTCGGAAGAG+TGG - chr3_1:82343705-82343724 Msa0380590:intron 55.0%
GCACCACTCTTCCGAACACT+AGG + chr3_1:82343711-82343730 None:intergenic 55.0%
AGATGCTGCTGCTAAAGCCG+TGG - chr3_1:82344556-82344575 Msa0380590:CDS 55.0%
!! AAAGCCGTGGAGGCACTCAA+TGG - chr3_1:82344569-82344588 Msa0380590:intron 55.0%
ACAGCACGAGTTGCTTCCTC+GGG + chr3_1:82344952-82344971 None:intergenic 55.0%
!! TATTAGGTGGGGTTGGCCGA+TGG - chr3_1:82345424-82345443 Msa0380590:intron 55.0%
TTGCAAAGGGGATGCTGCTG+TGG + chr3_1:82345755-82345774 None:intergenic 55.0%
CTGCTAGAATGAATGGCCGG+TGG - chr3_1:82346343-82346362 Msa0380590:intron 55.0%
CCATTTGTGACGACCTCTCC+TGG + chr3_1:82346385-82346404 None:intergenic 55.0%
CCAGGAGAGGTCGTCACAAA+TGG - chr3_1:82346382-82346401 Msa0380590:intron 55.0%
GGTCGTCACAAATGGCTCAC+GGG - chr3_1:82346390-82346409 Msa0380590:intron 55.0%
CAGAAAGCCGTCGCTACACT+TGG - chr3_1:82346421-82346440 Msa0380590:intron 55.0%
ACGGACAGCAAAGGGGAGAT+GGG + chr3_1:82346500-82346519 None:intergenic 55.0%
GTTCTCCGTCCTATTCCTCC+AGG - chr3_1:82346573-82346592 Msa0380590:intron 55.0%
! TTATTTGCTGGGGGTGGGCA+TGG - chr3_1:82346781-82346800 Msa0380590:intron 55.0%
GCAAGTGAGGCCGGTTACAA+TGG - chr3_1:82349036-82349055 Msa0380590:CDS 55.0%
TTCCAGGAACCAGTTGCTGC+GGG + chr3_1:82349456-82349475 None:intergenic 55.0%
CTGGTTCCTGGAATGAGACC+AGG - chr3_1:82349463-82349482 Msa0380590:intron 55.0%
GTTCCTGGAATGAGACCAGG+TGG - chr3_1:82349466-82349485 Msa0380590:intron 55.0%
CTTCATGCCCATGGTTCAGC+AGG - chr3_1:82349507-82349526 Msa0380590:intron 55.0%
TGTTGGCCCTGCTGAACCAT+GGG + chr3_1:82349517-82349536 None:intergenic 55.0%
TTGTTGGCCCTGCTGAACCA+TGG + chr3_1:82349518-82349537 None:intergenic 55.0%
ATGGTTCAGCAGGGCCAACA+AGG - chr3_1:82349517-82349536 Msa0380590:intron 55.0%
! CCTGGCATCGGAATACCTTG+TGG + chr3_1:82349755-82349774 None:intergenic 55.0%
! CCACAAGGTATTCCGATGCC+AGG - chr3_1:82349752-82349771 Msa0380590:intron 55.0%
ATTCCGATGCCAGGAGTAGC+TGG - chr3_1:82349761-82349780 Msa0380590:intron 55.0%
ATGCTCCTCCTGAACAGCAG+AGG - chr3_1:82349822-82349841 Msa0380590:intron 55.0%
ACAGTCCTCTGCTGTTCAGG+AGG + chr3_1:82349830-82349849 None:intergenic 55.0%
TGAGCATGCTGGAGCTGCAA+AGG - chr3_1:82349996-82350015 Msa0380590:intron 55.0%
GCTGGAGCTGCAAAGGTTAC+TGG - chr3_1:82350003-82350022 Msa0380590:intron 55.0%
TTTGGAGATGGACCAGCCTG+AGG - chr3_1:82350032-82350051 Msa0380590:intron 55.0%
TCAGATGCAACACCTCAGGC+TGG + chr3_1:82350047-82350066 None:intergenic 55.0%
GACTAAAGTTGCTGAGGCCG+TGG - chr3_1:82350089-82350108 Msa0380590:intron 55.0%
TGCTGCTGCTAAAGCCGTGG+AGG - chr3_1:82344559-82344578 Msa0380590:CDS 60.0%
GACAGCAAAGGGGAGATGGG+AGG + chr3_1:82346497-82346516 None:intergenic 60.0%
CACGGACAGCAAAGGGGAGA+TGG + chr3_1:82346501-82346520 None:intergenic 60.0%
CCATCCCAGGAACACCAGCA+GGG + chr3_1:82349090-82349109 None:intergenic 60.0%
CCTGCTGGTGTTCCTGGGAT+GGG - chr3_1:82349088-82349107 Msa0380590:CDS 60.0%
! TACCCGCAGCAACTGGTTCC+TGG - chr3_1:82349451-82349470 Msa0380590:intron 60.0%
GCACCACCTGGTCTCATTCC+AGG + chr3_1:82349472-82349491 None:intergenic 60.0%
! TTTGGCATTGGGGCACCACC+TGG + chr3_1:82349484-82349503 None:intergenic 60.0%
CAACAAGGTCAGCGTCCAGG+CGG - chr3_1:82349532-82349551 Msa0380590:intron 60.0%
! CCTTGTGGGTTGCGACCAGA+AGG + chr3_1:82349740-82349759 None:intergenic 60.0%
CCTTCTGGTCGCAACCCACA+AGG - chr3_1:82349737-82349756 Msa0380590:intron 60.0%
CCACCAGCTACTCCTGGCAT+CGG + chr3_1:82349767-82349786 None:intergenic 60.0%
GCTGTAGCCAGAGCCTGCAT+GGG + chr3_1:82349794-82349813 None:intergenic 60.0%
! ACGACCTCTCCTGGTGCCAG+CGG + chr3_1:82346376-82346395 None:intergenic 65.0%
CCCTGCTGGTGTTCCTGGGA+TGG - chr3_1:82349087-82349106 Msa0380590:CDS 65.0%
CCCATCCCAGGAACACCAGC+AGG + chr3_1:82349091-82349110 None:intergenic 65.0%
GGCCAACAAGGTCAGCGTCC+AGG - chr3_1:82349529-82349548 Msa0380590:intron 65.0%
CGCCTGGACGCTGACCTTGT+TGG + chr3_1:82349534-82349553 None:intergenic 65.0%
AAGGTCAGCGTCCAGGCGGA+CGG - chr3_1:82349536-82349555 Msa0380590:intron 65.0%
CCGATGCCAGGAGTAGCTGG+TGG - chr3_1:82349764-82349783 Msa0380590:intron 65.0%
GGCGTTCCACCAGCTACTCC+TGG + chr3_1:82349773-82349792 None:intergenic 65.0%
AGCTGGTGGAACGCCCATGC+AGG - chr3_1:82349778-82349797 Msa0380590:intron 65.0%
TGGAACGCCCATGCAGGCTC+TGG - chr3_1:82349784-82349803 Msa0380590:intron 65.0%
GGCTGTAGCCAGAGCCTGCA+TGG + chr3_1:82349795-82349814 None:intergenic 65.0%
CAATGACGTGGCGGCGGCTC+CGG - chr3_1:82343299-82343318 Msa0380590:three_prime_UTR 70.0%
TGCCAGCGGCGGCATTCCAC+CGG + chr3_1:82346362-82346381 None:intergenic 70.0%
! ACCTCTCCTGGTGCCAGCGG+CGG + chr3_1:82346373-82346392 None:intergenic 70.0%
GGAATGCCGCCGCTGGCACC+AGG - chr3_1:82346364-82346383 Msa0380590:intron 75.0%
GTCAGCGTCCAGGCGGACGG+CGG - chr3_1:82349539-82349558 Msa0380590:intron 75.0%
TCAGCGTCCAGGCGGACGGC+GGG - chr3_1:82349540-82349559 Msa0380590:intron 75.0%
! GGCCGGTGGAATGCCGCCGC+TGG - chr3_1:82346357-82346376 Msa0380590:intron 80.0%
! GCCGCCGCTGGCACCAGGAG+AGG - chr3_1:82346369-82346388 Msa0380590:intron 80.0%
! CAGCGTCCAGGCGGACGGCG+GGG - chr3_1:82349541-82349560 Msa0380590:intron 80.0%
! CCTGCTCCCCGCCGTCCGCC+TGG + chr3_1:82349550-82349569 None:intergenic 85.0%
! CCAGGCGGACGGCGGGGAGC+AGG - chr3_1:82349547-82349566 Msa0380590:intron 85.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 82343057 82350547 82343057 ID=Msa0380590;Name=Msa0380590
chr3_1 mRNA 82343057 82350547 82343057 ID=Msa0380590-mRNA-1;Parent=Msa0380590;Name=Msa0380590-mRNA-1;_AED=0.13;_eAED=0.13;_QI=216|1|1|1|1|1|9|347|622
chr3_1 exon 82343057 82343646 82343057 ID=Msa0380590-mRNA-1:exon:21014;Parent=Msa0380590-mRNA-1
chr3_1 exon 82343757 82343897 82343757 ID=Msa0380590-mRNA-1:exon:21013;Parent=Msa0380590-mRNA-1
chr3_1 exon 82343989 82344165 82343989 ID=Msa0380590-mRNA-1:exon:21012;Parent=Msa0380590-mRNA-1
chr3_1 exon 82344448 82344579 82344448 ID=Msa0380590-mRNA-1:exon:21011;Parent=Msa0380590-mRNA-1
chr3_1 exon 82348462 82348551 82348462 ID=Msa0380590-mRNA-1:exon:21010;Parent=Msa0380590-mRNA-1
chr3_1 exon 82348635 82348712 82348635 ID=Msa0380590-mRNA-1:exon:21009;Parent=Msa0380590-mRNA-1
chr3_1 exon 82348799 82349455 82348799 ID=Msa0380590-mRNA-1:exon:21008;Parent=Msa0380590-mRNA-1
chr3_1 exon 82349855 82349973 82349855 ID=Msa0380590-mRNA-1:exon:21007;Parent=Msa0380590-mRNA-1
chr3_1 exon 82350100 82350547 82350100 ID=Msa0380590-mRNA-1:exon:21006;Parent=Msa0380590-mRNA-1
chr3_1 five_prime_UTR 82350332 82350547 82350332 ID=Msa0380590-mRNA-1:five_prime_utr;Parent=Msa0380590-mRNA-1
chr3_1 CDS 82350100 82350331 82350100 ID=Msa0380590-mRNA-1:cds;Parent=Msa0380590-mRNA-1
chr3_1 CDS 82349855 82349973 82349855 ID=Msa0380590-mRNA-1:cds;Parent=Msa0380590-mRNA-1
chr3_1 CDS 82348799 82349455 82348799 ID=Msa0380590-mRNA-1:cds;Parent=Msa0380590-mRNA-1
chr3_1 CDS 82348635 82348712 82348635 ID=Msa0380590-mRNA-1:cds;Parent=Msa0380590-mRNA-1
chr3_1 CDS 82348462 82348551 82348462 ID=Msa0380590-mRNA-1:cds;Parent=Msa0380590-mRNA-1
chr3_1 CDS 82344448 82344579 82344448 ID=Msa0380590-mRNA-1:cds;Parent=Msa0380590-mRNA-1
chr3_1 CDS 82343989 82344165 82343989 ID=Msa0380590-mRNA-1:cds;Parent=Msa0380590-mRNA-1
chr3_1 CDS 82343757 82343897 82343757 ID=Msa0380590-mRNA-1:cds;Parent=Msa0380590-mRNA-1
chr3_1 CDS 82343404 82343646 82343404 ID=Msa0380590-mRNA-1:cds;Parent=Msa0380590-mRNA-1
chr3_1 three_prime_UTR 82343057 82343403 82343057 ID=Msa0380590-mRNA-1:three_prime_utr;Parent=Msa0380590-mRNA-1
Gene Sequence

>Msa0380590

ATGGCGCAAAATCACGAGAATGTGAACAATGACGTGGCGGCGGCTCCGGTTCCGAATCATCTGACAACGACGTCGTTGTACGTCGGAGATCTCGATCACGACGTCACCGATTCACAGCTTTACGATCTTTTCAACCAGATCGGTCAAGTTGTTTCTGTTCGGATCTGTAGGGATTTGGCTTCTCAACAATCCCTAGGTTATGGTTATGTCAATTTCAGTAACCCTCATGACGCTGCAAAGGCGATGGATGTGTTGAATTTCACCCCACTGAACAACAAACCGATTCGGATTATGTATTCTCATCGCGACCCTAGTGTTCGGAAGAGTGGTGCTGCTAATATTTTCATCAAGAACCTGGACAGGGCAATTGATCATAAAGCTTTATATGATACCTTTTCGATTTTTGGAAATATCCTTTCTTGCAAGATAGCAATGGATGCTTCTGGTCTGTCTAAAGGCTACGGTTTTGTCCAATTTGAGAATGAAGAATCTGCACAAAGTGCAATTGACAAGTTAAACGGCATGCTGCTCAACGATAAACCGGTCTACGTTGGTCATTTCCAAAGGAAGCAGGATAGAGATAATGCTTTGAGCAATGCGAAGTTTAATAATGTCTATGTGAAAAACCTATCAGAGTCGGTTACAGATGACGACTTGAAGAACATTTTTGGAGAATATGGAACTATTACTAGTGCTGTAGTAATGAGAGATGTAGATGGTAAATCAAAATGTTTTGGTTTTGTCAATTTTGAAAATGCAGATGCTGCTGCTAAAGCCGTGGAGGCACTCAATGGAAAGAAATTTGATGACAAGGAGTGGTATGTTGGAAAAGCCCTAAAAAAATATGAAAGGGAGCTTGAGCTGAAAGAAAGACATGAGCAGAGTATGAAGGAAACTGTTGACAAGTTTTATGGTGCAAACTTGTATCTCAAGAACTTGGATGATAGTGTCACTGATGAAAAACTTAGCGAACTGTTCTCCGAGTTTGGTACAGTAACTTCATGCAAGATTCTGCGAGATCCACAGGGAATTAGTAGGGGATCTGGATTTGTTGCCTTTTCAACTCCCGAGGAAGCAACTCGTGCTCTTGCTGAGATGAATGGCAAAATGGTTGCGGGCAAACCTCTTTATGTTGCTCCTGCTCAGAAAAAGGAAGAGAGAAAAGCAAGGTTACAGGCACAATTTTCGCAAGTGAGGCCGGTTACAATGGCTCCTATTGCACCTCGAATGCCATTTTACCCTGCTGGTGTTCCTGGGATGGGACAACAAATTATGTATGGCCAAGCTCCTCCAGCCTTCATATCTCAGGCTGGATTTGGTTACCCGCAGCAACTGGTTCCTGGAATGAGACCAGGTGGTGCCCCAATGCCAAACTTCTTCATGCCCATGGTTCAGCAGGGCCAACAAGGTCAGCGTCCAGGCGGACGGCGGGGAGCAGGTCCTATGCAACAACTCCCACATTCATTGCCAATGATGCAGCAACAGATGCATCCAAGAGGACGTGTCTATCGATATCCTTCTGGTCGCAACCCACAAGGTATTCCGATGCCAGGAGTAGCTGGTGGAACGCCCATGCAGGCTCTGGCTACAGCCCTTGCAAATGCTCCTCCTGAACAGCAGAGGACTATGCTTGGTGAAGTTTTATACCCTCTAGTAGAGAAGATTGAGCATGCTGGAGCTGCAAAGGTTACTGGGATGCTTTTGGAGATGGACCAGCCTGAGGTGTTGCATCTGATTGAGTCACCAGAGGCTCTCAAGACTAAAGTTGCTGAGGCCGTGGATGTGTTGAGAAATGTTGCACAGCAGCAATCAAACAGCCCAACTGATCAACTAGCTTCTCTCTCTCTTAACGACAATCTTGAGTCTTAG
Protein sequence

>Msa0380590

MAQNHENVNNDVAAAPVPNHLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAAKAMDVLNFTPLNNKPIRIMYSHRDPSVRKSGAANIFIKNLDRAIDHKALYDTFSIFGNILSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYVGHFQRKQDRDNALSNAKFNNVYVKNLSESVTDDDLKNIFGEYGTITSAVVMRDVDGKSKCFGFVNFENADAAAKAVEALNGKKFDDKEWYVGKALKKYERELELKERHEQSMKETVDKFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSCKILRDPQGISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVTMAPIAPRMPFYPAGVPGMGQQIMYGQAPPAFISQAGFGYPQQLVPGMRPGGAPMPNFFMPMVQQGQQGQRPGGRRGAGPMQQLPHSLPMMQQQMHPRGRVYRYPSGRNPQGIPMPGVAGGTPMQALATALANAPPEQQRTMLGEVLYPLVEKIEHAGAAKVTGMLLEMDQPEVLHLIESPEALKTKVAEAVDVLRNVAQQQSNSPTDQLASLSLNDNLES*