AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0500420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0500420 MtrunA17_Chr3g0134141 99.035 622 6 0 1 622 1 622 0.0 1279
Msa0500420 MtrunA17_Chr1g0153181 74.359 624 138 6 17 619 25 647 0.0 890
Msa0500420 MtrunA17_Chr4g0044541 72.358 615 144 5 20 610 30 642 0.0 882
Msa0500420 MtrunA17_Chr1g0201151 56.426 638 234 15 13 617 19 645 0.0 666
Msa0500420 MtrunA17_Chr6g0465751 50.886 621 251 14 13 601 14 612 0.0 570
Msa0500420 MtrunA17_Chr6g0466501 50.886 621 247 13 13 601 14 608 0.0 570
Msa0500420 MtrunA17_Chr6g0465691 50.000 552 218 13 82 601 1 526 1.91e-167 488
Msa0500420 MtrunA17_Chr6g0465691 33.813 278 170 4 25 289 32 308 1.95e-42 160
Msa0500420 MtrunA17_Chr6g0465691 35.079 191 106 3 24 197 118 307 7.60e-27 115
Msa0500420 MtrunA17_Chr6g0466451 50.965 518 231 12 98 600 1 510 4.75e-163 476
Msa0500420 MtrunA17_Chr6g0466451 36.585 287 163 5 25 294 16 300 1.34e-46 172
Msa0500420 MtrunA17_Chr6g0466451 36.019 211 109 6 24 215 105 308 2.94e-28 119
Msa0500420 MtrunA17_Chr6g0465631 50.965 518 231 12 98 600 1 510 7.57e-163 476
Msa0500420 MtrunA17_Chr6g0465631 36.585 287 163 5 25 294 16 300 1.39e-46 172
Msa0500420 MtrunA17_Chr6g0465631 36.019 211 109 6 24 215 105 308 3.08e-28 119
Msa0500420 MtrunA17_Chr0c09g0493511 49.726 547 231 14 82 601 1 530 2.23e-162 475
Msa0500420 MtrunA17_Chr0c09g0493511 34.892 278 167 4 25 289 32 308 7.01e-46 170
Msa0500420 MtrunA17_Chr0c09g0493511 36.126 191 104 3 24 197 118 307 7.92e-29 120
Msa0500420 MtrunA17_Chr7g0265341 46.078 612 292 11 17 598 63 666 6.40e-157 467
Msa0500420 MtrunA17_Chr1g0179701 43.936 437 224 6 25 459 63 480 4.97e-112 347
Msa0500420 MtrunA17_Chr1g0179701 33.333 186 111 2 24 197 241 425 4.87e-25 109
Msa0500420 MtrunA17_Chr3g0110211 39.766 171 100 3 25 193 26 195 1.03e-30 124
Msa0500420 MtrunA17_Chr3g0110211 31.937 191 118 6 105 292 18 199 3.47e-20 92.8
Msa0500420 MtrunA17_Chr3g0110211 32.447 188 107 5 206 390 28 198 5.11e-19 89.4
Msa0500420 MtrunA17_Chr2g0288251 28.137 263 162 8 25 265 61 318 3.38e-27 114
Msa0500420 MtrunA17_Chr2g0288251 25.912 274 179 8 114 374 62 324 3.61e-21 96.3
Msa0500420 MtrunA17_Chr2g0288251 30.601 183 100 7 18 182 153 326 4.66e-13 71.2
Msa0500420 MtrunA17_Chr2g0288251 24.413 213 149 5 175 384 32 235 1.01e-11 67.4
Msa0500420 MtrunA17_Chr1g0153871 25.267 281 201 5 113 389 98 373 1.57e-25 109
Msa0500420 MtrunA17_Chr1g0153871 28.077 260 163 6 25 265 98 352 1.53e-24 107
Msa0500420 MtrunA17_Chr1g0153871 32.044 181 101 4 19 182 185 360 4.19e-19 90.5
Msa0500420 MtrunA17_Chr1g0153871 24.479 192 131 4 198 386 92 272 2.66e-11 66.2
Msa0500420 MtrunA17_Chr4g0074711 27.757 263 162 9 25 265 75 331 6.13e-25 107
Msa0500420 MtrunA17_Chr4g0074711 24.648 284 199 8 114 387 76 354 1.23e-19 91.7
Msa0500420 MtrunA17_Chr3g0133651 25.874 286 183 8 25 286 94 374 3.56e-24 105
Msa0500420 MtrunA17_Chr3g0133651 24.252 301 214 6 99 390 76 371 6.52e-23 101
Msa0500420 MtrunA17_Chr3g0139111 26.429 280 165 7 25 271 61 332 1.13e-22 101
Msa0500420 MtrunA17_Chr3g0139111 25.967 181 115 4 204 383 61 223 9.64e-14 73.9
Msa0500420 MtrunA17_Chr4g0070231 27.338 278 160 7 22 266 44 312 1.58e-22 100
Msa0500420 MtrunA17_Chr4g0070231 27.597 308 190 9 97 383 31 326 1.51e-20 94.4
Msa0500420 MtrunA17_Chr8g0344491 27.143 280 162 7 22 268 60 330 1.95e-22 100
Msa0500420 MtrunA17_Chr8g0344491 26.490 302 186 10 103 383 57 343 5.23e-17 84.0
Msa0500420 MtrunA17_Chr2g0328791 25.887 282 164 7 25 266 16 292 6.01e-22 99.0
Msa0500420 MtrunA17_Chr2g0328791 25.946 185 123 5 204 385 16 189 9.36e-15 77.0
Msa0500420 MtrunA17_Chr4g0045221 26.429 280 162 8 25 265 117 391 5.27e-21 96.3
Msa0500420 MtrunA17_Chr4g0045221 24.756 307 190 11 114 390 118 413 5.90e-16 80.9
Msa0500420 MtrunA17_Chr4g0045221 28.646 192 128 5 197 385 110 295 4.27e-13 72.0
Msa0500420 MtrunA17_Chr6g0466541 35.220 159 68 3 237 395 2 125 8.99e-20 85.9
Msa0500420 MtrunA17_Chr6g0466541 37.415 147 65 5 145 289 1 122 2.00e-16 76.3
Msa0500420 MtrunA17_Chr0c09g0493521 59.701 67 21 1 17 77 12 78 2.29e-19 82.8
Msa0500420 MtrunA17_Chr6g0465621 67.925 53 17 0 25 77 26 78 2.43e-19 83.2
Msa0500420 MtrunA17_Chr6g0466441 67.925 53 17 0 25 77 26 78 2.43e-19 83.2
Msa0500420 MtrunA17_Chr4g0026301 27.888 251 163 7 17 261 105 343 3.36e-19 91.3
Msa0500420 MtrunA17_Chr6g0465701 51.220 82 31 2 12 84 4 85 8.90e-19 81.6
Msa0500420 MtrunA17_Chr0c09g0493581 58.209 67 22 1 17 77 12 78 1.38e-18 80.5
Msa0500420 MtrunA17_Chr6g0465741 59.701 67 26 1 543 608 40 106 1.62e-17 79.0
Msa0500420 MtrunA17_Chr7g0217261 28.287 251 162 7 17 261 344 582 3.84e-17 85.5
Msa0500420 MtrunA17_Chr7g0276201 23.622 254 175 5 24 269 104 346 6.99e-17 84.0
Msa0500420 MtrunA17_Chr7g0276201 26.207 290 180 10 107 388 99 362 3.17e-12 69.3
Msa0500420 MtrunA17_Chr3g0116631 31.183 186 117 5 205 387 111 288 1.49e-16 80.5
Msa0500420 MtrunA17_Chr3g0116631 29.885 174 115 4 112 278 109 282 2.24e-14 74.3
Msa0500420 MtrunA17_Chr3g0116631 28.000 175 104 4 26 184 111 279 7.93e-13 69.7
Msa0500420 MtrunA17_Chr3g0087481 32.778 180 112 5 205 381 62 235 4.48e-16 78.2
Msa0500420 MtrunA17_Chr3g0087481 26.744 172 112 4 26 184 62 232 4.19e-12 66.6
Msa0500420 MtrunA17_Chr8g0372111 25.769 260 163 9 26 270 420 664 4.53e-16 82.4
Msa0500420 MtrunA17_Chr8g0335981 23.413 252 174 7 26 268 217 458 7.86e-16 81.3
Msa0500420 MtrunA17_Chr7g0266451 24.206 252 170 9 24 269 101 337 4.12e-15 78.2
Msa0500420 MtrunA17_Chr7g0267571 27.684 177 104 3 26 182 111 283 7.49e-15 75.9
Msa0500420 MtrunA17_Chr7g0267571 32.124 193 121 7 190 376 95 283 2.50e-14 74.3
Msa0500420 MtrunA17_Chr1g0177101 29.412 170 106 3 26 182 110 278 2.70e-14 74.3
Msa0500420 MtrunA17_Chr1g0177101 30.114 176 112 5 205 376 110 278 8.00e-14 72.8
Msa0500420 MtrunA17_Chr4g0058151 30.645 186 115 5 205 387 124 298 3.61e-14 73.6
Msa0500420 MtrunA17_Chr4g0058151 26.946 167 113 3 26 184 124 289 7.98e-13 69.7
Msa0500420 MtrunA17_Chr6g0466551 60.000 65 25 1 538 601 34 98 7.88e-14 68.9
Msa0500420 MtrunA17_Chr7g0268551 27.437 277 154 10 205 459 18 269 2.23e-13 72.8
Msa0500420 MtrunA17_Chr2g0312971 29.310 174 105 6 25 185 114 282 5.66e-13 70.1
Msa0500420 MtrunA17_Chr4g0033701 30.387 181 95 6 198 378 22 171 8.55e-13 71.6
Msa0500420 MtrunA17_Chr1g0168601 32.716 162 94 3 225 384 84 232 2.61e-12 67.0
Msa0500420 MtrunA17_Chr7g0263001 41.975 81 46 1 308 387 37 117 2.82e-12 64.7
Msa0500420 MtrunA17_Chr5g0411091 28.272 191 124 6 197 384 91 271 6.51e-12 67.0
Msa0500420 MtrunA17_Chr4g0068631 27.097 155 106 3 26 175 90 242 7.72e-12 68.6
Msa0500420 MtrunA17_Chr4g0068631 26.923 156 110 3 112 265 88 241 2.25e-11 67.0
Msa0500420 MtrunA17_Chr7g0259641 29.268 246 141 11 170 397 549 779 1.69e-11 67.4
Msa0500420 MtrunA17_Chr1g0181111 28.708 209 135 4 192 388 73 279 3.21e-11 64.7
Msa0500420 MtrunA17_Chr1g0211191 28.188 149 89 2 37 168 83 230 8.53e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0500420 AT4G34110.1 68.781 599 177 6 24 617 36 629 0.0 812
Msa0500420 AT4G34110.1 34.948 289 171 3 110 397 34 306 1.37e-51 188
Msa0500420 AT4G34110.1 34.483 203 115 4 19 205 210 410 2.25e-27 117
Msa0500420 AT1G49760.1 65.655 626 187 4 23 620 44 669 0.0 793
Msa0500420 AT1G49760.2 65.655 626 187 4 23 620 44 669 0.0 793
Msa0500420 AT2G23350.1 63.666 622 196 8 24 620 46 662 0.0 760
Msa0500420 AT1G71770.1 54.016 635 235 14 24 615 59 679 0.0 608
Msa0500420 AT1G71770.2 54.016 635 235 14 24 615 59 679 0.0 608
Msa0500420 AT1G22760.1 53.945 621 251 10 24 618 49 660 0.0 603
Msa0500420 AT2G36660.1 39.900 599 301 11 22 598 22 583 1.18e-125 384
Msa0500420 AT1G34140.1 47.959 392 172 8 82 462 1 371 2.35e-112 343
Msa0500420 AT1G34140.1 35.714 280 163 4 25 289 32 309 1.68e-44 164
Msa0500420 AT1G34140.1 32.000 200 113 4 24 204 119 314 4.66e-25 108
Msa0500420 AT3G16380.1 44.845 388 208 4 25 408 22 407 5.09e-101 318
Msa0500420 AT3G16380.1 36.058 208 110 5 8 197 187 389 2.23e-27 117
Msa0500420 AT3G16380.1 35.714 196 111 5 195 389 13 194 3.37e-25 110
Msa0500420 AT1G11650.2 29.643 280 168 10 10 265 44 318 1.08e-27 116
Msa0500420 AT1G11650.2 25.581 301 209 9 104 395 51 345 3.48e-20 93.6
Msa0500420 AT2G18510.1 36.842 171 105 3 25 193 26 195 1.16e-27 115
Msa0500420 AT2G18510.1 30.159 189 112 5 205 390 27 198 6.49e-17 83.2
Msa0500420 AT5G54900.1 26.792 265 168 8 25 268 61 320 2.67e-27 114
Msa0500420 AT5G54900.1 24.573 293 202 9 113 396 61 343 5.04e-20 93.2
Msa0500420 AT5G54900.1 26.471 204 137 6 184 384 41 234 1.57e-15 79.3
Msa0500420 AT1G11650.1 28.679 265 160 9 10 250 44 303 2.25e-25 107
Msa0500420 AT1G11650.1 26.616 263 172 9 104 354 51 304 1.37e-17 84.3
Msa0500420 AT4G27000.1 25.379 264 171 8 25 268 81 338 2.49e-25 109
Msa0500420 AT4G27000.1 24.188 277 189 7 113 379 81 346 5.73e-19 90.1
Msa0500420 AT4G27000.1 27.315 216 129 6 195 407 72 262 1.31e-16 82.8
Msa0500420 AT1G47490.1 25.070 359 232 9 87 413 71 424 3.45e-25 109
Msa0500420 AT1G47490.1 27.974 311 186 11 25 309 102 400 2.83e-24 106
Msa0500420 AT3G14100.1 28.214 280 159 7 22 268 57 327 2.11e-24 106
Msa0500420 AT3G14100.1 28.723 282 164 10 103 363 54 319 1.28e-18 89.4
Msa0500420 AT3G14100.1 29.834 181 108 4 204 383 60 222 1.56e-15 79.7
Msa0500420 AT1G54080.1 27.500 280 161 7 22 268 61 331 2.31e-24 106
Msa0500420 AT1G54080.1 27.491 291 168 9 103 369 58 329 2.70e-18 88.2
Msa0500420 AT1G54080.1 29.834 181 108 4 204 383 64 226 2.00e-15 79.3
Msa0500420 AT1G54080.2 27.465 284 160 8 22 268 61 335 6.23e-23 102
Msa0500420 AT1G54080.2 27.458 295 167 10 103 369 58 333 6.15e-17 84.0
Msa0500420 AT1G54080.2 29.730 185 107 5 204 383 64 230 4.01e-14 75.5
Msa0500420 AT1G47500.1 27.974 311 186 12 25 309 104 402 6.72e-23 102
Msa0500420 AT1G47500.1 27.356 329 202 11 114 414 105 424 1.53e-22 101
Msa0500420 AT1G47500.1 25.581 215 145 6 186 395 86 290 1.44e-11 67.4
Msa0500420 AT3G19130.1 27.113 284 171 8 114 372 110 382 6.25e-22 99.4
Msa0500420 AT3G19130.1 27.338 278 157 9 25 265 109 378 1.43e-21 98.2
Msa0500420 AT1G17370.2 27.076 277 163 7 22 268 52 319 1.01e-21 98.6
Msa0500420 AT1G17370.2 28.058 278 168 8 103 363 49 311 3.03e-18 87.8
Msa0500420 AT1G17370.2 27.624 181 112 4 204 383 55 217 8.89e-13 71.2
Msa0500420 AT1G17370.1 26.786 280 163 7 22 268 52 322 2.34e-21 97.4
Msa0500420 AT1G17370.1 28.114 281 167 9 103 363 49 314 9.92e-19 89.4
Msa0500420 AT1G17370.1 27.624 181 112 4 204 383 55 217 1.02e-12 70.9
Msa0500420 AT1G49600.3 26.296 270 165 7 25 265 120 384 3.33e-21 97.4
Msa0500420 AT1G49600.3 24.749 299 203 7 114 398 121 411 4.15e-20 94.0
Msa0500420 AT1G49600.2 26.296 270 165 7 25 265 120 384 3.33e-21 97.4
Msa0500420 AT1G49600.2 24.749 299 203 7 114 398 121 411 4.15e-20 94.0
Msa0500420 AT1G49600.1 26.296 270 165 7 25 265 120 384 3.44e-21 97.4
Msa0500420 AT1G49600.1 26.007 273 183 6 114 372 121 388 3.40e-20 94.4
Msa0500420 AT5G19350.2 24.908 273 168 8 25 266 25 291 6.94e-21 95.9
Msa0500420 AT5G19350.2 23.050 282 197 6 113 379 25 301 7.57e-16 80.5
Msa0500420 AT5G19350.2 24.651 215 123 5 18 203 114 318 7.09e-14 74.7
Msa0500420 AT5G19350.2 26.540 211 138 6 201 408 22 218 3.78e-13 72.4
Msa0500420 AT5G19350.1 24.188 277 169 8 25 266 25 295 3.00e-20 94.4
Msa0500420 AT5G19350.1 23.741 278 188 5 113 371 25 297 1.19e-15 80.1
Msa0500420 AT5G19350.1 26.699 206 136 5 201 403 22 215 2.91e-14 75.9
Msa0500420 AT5G19350.1 25.114 219 121 6 18 203 114 322 2.12e-13 73.2
Msa0500420 AT5G41690.1 20.993 443 258 11 25 378 69 508 9.74e-20 93.6
Msa0500420 AT5G41690.1 21.148 331 212 4 98 382 57 384 3.58e-13 72.8
Msa0500420 AT5G41690.3 20.993 443 258 11 25 378 69 508 9.74e-20 93.6
Msa0500420 AT5G41690.3 21.148 331 212 4 98 382 57 384 3.58e-13 72.8
Msa0500420 AT5G41690.2 20.993 443 258 11 25 378 69 508 9.74e-20 93.6
Msa0500420 AT5G41690.2 21.148 331 212 4 98 382 57 384 3.58e-13 72.8
Msa0500420 AT1G45100.1 22.680 388 252 11 22 370 62 440 4.34e-18 88.2
Msa0500420 AT3G52150.2 32.961 179 115 4 205 381 78 253 2.00e-17 82.8
Msa0500420 AT3G52150.2 30.159 189 115 6 103 278 69 253 1.74e-15 77.0
Msa0500420 AT3G52150.1 32.961 179 115 4 205 381 78 253 2.00e-17 82.8
Msa0500420 AT3G52150.1 30.159 189 115 6 103 278 69 253 1.74e-15 77.0
Msa0500420 AT4G00830.3 24.713 348 228 9 111 453 115 433 1.81e-16 83.2
Msa0500420 AT4G00830.3 26.749 243 156 6 24 261 116 341 5.45e-15 78.6
Msa0500420 AT4G00830.5 24.713 348 228 9 111 453 115 433 1.81e-16 83.2
Msa0500420 AT4G00830.5 26.749 243 156 6 24 261 116 341 5.45e-15 78.6
Msa0500420 AT4G00830.2 24.501 351 233 10 111 453 115 441 2.46e-16 82.8
Msa0500420 AT4G00830.2 26.230 244 164 6 24 261 116 349 7.82e-16 81.3
Msa0500420 AT4G00830.1 24.501 351 233 10 111 453 115 441 2.46e-16 82.8
Msa0500420 AT4G00830.1 26.230 244 164 6 24 261 116 349 7.82e-16 81.3
Msa0500420 AT4G00830.6 24.501 351 233 10 111 453 115 441 2.46e-16 82.8
Msa0500420 AT4G00830.6 26.230 244 164 6 24 261 116 349 7.82e-16 81.3
Msa0500420 AT3G52380.1 27.059 170 100 3 26 175 118 283 1.16e-15 79.0
Msa0500420 AT3G52380.1 29.032 186 125 5 205 386 118 300 1.12e-13 73.2
Msa0500420 AT3G52380.1 27.222 180 112 5 114 280 118 291 4.48e-11 65.1
Msa0500420 AT3G19350.1 48.611 72 37 0 532 603 23 94 1.55e-15 73.2
Msa0500420 AT5G50250.1 29.545 176 115 3 26 193 115 289 1.74e-15 77.8
Msa0500420 AT5G50250.1 30.319 188 113 5 205 387 115 289 9.41e-14 72.8
Msa0500420 AT2G15500.1 31.361 169 51 3 259 427 29 132 2.02e-15 73.9
Msa0500420 AT2G35410.1 30.168 179 113 4 205 378 97 268 2.42e-15 77.8
Msa0500420 AT2G37220.1 28.191 188 112 3 114 278 93 280 2.64e-15 77.4
Msa0500420 AT2G37220.1 25.714 210 128 3 11 193 78 286 5.82e-14 73.2
Msa0500420 AT4G00830.4 24.217 351 234 10 111 453 115 441 2.69e-15 79.3
Msa0500420 AT4G00830.4 25.506 247 162 7 24 261 116 349 7.01e-14 75.1
Msa0500420 AT3G52660.3 24.291 247 167 5 24 261 92 327 3.01e-14 75.9
Msa0500420 AT3G52660.1 24.291 247 167 5 24 261 92 327 3.01e-14 75.9
Msa0500420 AT3G52660.2 24.291 247 167 5 24 261 92 327 3.01e-14 75.9
Msa0500420 AT1G47490.2 29.240 171 111 6 25 185 102 272 3.53e-14 74.3
Msa0500420 AT1G47490.2 27.397 219 139 8 186 395 81 288 1.47e-12 69.3
Msa0500420 AT4G16280.3 26.087 161 116 1 17 174 113 273 5.32e-14 75.5
Msa0500420 AT2G44710.2 21.569 255 183 6 26 272 216 461 5.65e-14 75.9
Msa0500420 AT2G44710.1 21.569 255 183 6 26 272 216 461 5.65e-14 75.9
Msa0500420 AT2G44710.4 21.569 255 183 6 26 272 131 376 6.20e-14 75.5
Msa0500420 AT4G16280.4 26.087 161 116 1 17 174 38 198 7.93e-14 75.1
Msa0500420 AT4G16280.2 26.087 161 116 1 17 174 113 273 9.93e-14 75.1
Msa0500420 AT2G16940.1 30.573 157 91 3 36 176 194 348 1.09e-13 74.7
Msa0500420 AT2G16940.5 30.573 157 91 3 36 176 53 207 1.44e-13 73.6
Msa0500420 AT2G16940.4 30.573 157 91 3 36 176 53 207 1.44e-13 73.6
Msa0500420 AT4G24770.1 29.412 187 118 4 205 388 152 327 1.55e-13 72.8
Msa0500420 AT4G24770.1 27.528 178 120 3 15 184 141 317 1.57e-13 72.8
Msa0500420 AT4G24770.2 29.412 187 118 4 205 388 152 327 1.55e-13 72.8
Msa0500420 AT4G24770.2 27.528 178 120 3 15 184 141 317 1.57e-13 72.8
Msa0500420 AT2G16940.2 30.573 157 91 3 36 176 243 397 1.95e-13 73.9
Msa0500420 AT1G47500.2 28.070 171 113 6 25 185 104 274 5.68e-13 70.9
Msa0500420 AT1G47500.2 26.866 201 132 6 186 381 86 276 7.17e-11 64.3
Msa0500420 AT1G01080.1 26.562 192 126 5 106 283 102 292 6.26e-13 70.5
Msa0500420 AT3G13224.2 25.595 168 103 4 205 367 21 171 1.99e-12 69.7
Msa0500420 AT1G01080.2 26.425 193 126 5 106 283 102 293 3.00e-12 68.2
Msa0500420 AT3G13224.3 25.595 168 103 4 205 367 12 162 3.24e-12 68.9
Msa0500420 AT5G40490.1 26.230 183 117 5 205 385 44 210 5.60e-12 68.6
Msa0500420 AT3G13224.1 25.595 168 103 4 205 367 21 171 1.73e-11 65.1
Msa0500420 AT2G16940.3 28.916 166 91 4 36 176 223 386 1.83e-11 67.4
Msa0500420 AT4G26650.1 26.087 184 111 9 205 371 17 192 2.41e-11 66.6
Msa0500420 AT4G26650.2 26.087 184 111 9 205 371 14 189 2.58e-11 66.6
Msa0500420 AT3G46020.1 31.313 99 67 1 302 399 3 101 2.69e-11 61.2
Msa0500420 AT2G47310.1 26.047 215 144 7 189 396 94 300 3.05e-11 66.6
Msa0500420 AT5G40490.2 27.273 165 102 5 223 385 45 193 5.70e-11 65.5
Msa0500420 AT5G03580.1 37.500 80 50 0 307 386 18 97 5.93e-11 60.1
Msa0500420 AT1G60000.1 22.280 193 143 3 5 191 66 257 6.46e-11 63.5
Msa0500420 AT5G47620.1 25.568 176 115 6 205 371 8 176 6.53e-11 65.5
Msa0500420 AT5G47620.2 25.568 176 115 6 205 371 8 176 6.53e-11 65.5
Msa0500420 AT5G47620.5 25.568 176 115 6 205 371 8 176 6.53e-11 65.5
Msa0500420 AT4G14300.1 25.405 185 131 5 205 385 8 189 7.07e-11 65.1
Msa0500420 AT4G14300.2 25.405 185 131 5 205 385 8 189 7.07e-11 65.1
Msa0500420 AT1G03457.3 39.759 83 46 2 111 192 224 303 7.77e-11 64.3

Find 189 sgRNAs with CRISPR-Local

Find 537 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGATTCTTCATTCTCAAAT+TGG 0.190670 3_4:+40788874 None:intergenic
TACTACTTGGTTACTGGATT+TGG 0.244519 3_4:-40782759 Msa0500420:three_prime_UTR
TGTTGCTCCTGCTCAGAAAA+AGG 0.264739 3_4:-40788043 Msa0500420:CDS
GTCTGTTTGACTTTGTTTCT+AGG 0.281094 3_4:-40782737 Msa0500420:three_prime_UTR
CTTACAGTCCTCTGCTGTTC+AGG 0.285841 3_4:+40783313 None:intergenic
GCTGGAGCTGCAAAGGTTAC+TGG 0.301054 3_4:-40783140 Msa0500420:CDS
GGAACACCAGCAGGGTAAAA+TGG 0.312505 3_4:+40784064 None:intergenic
GATGGTAAATCAAAATGTTT+TGG 0.314489 3_4:-40788630 Msa0500420:CDS
TAATATATGCAGGCTGGATT+TGG 0.320619 3_4:-40783716 Msa0500420:intron
AAAGGTTACTGGGATGCTTT+TGG 0.320904 3_4:-40783129 Msa0500420:CDS
AGCGAACTGTTCTCCGAGTT+TGG 0.328906 3_4:-40788378 Msa0500420:CDS
CCAGTAACCAAGTAGTAAAA+AGG 0.331065 3_4:+40782765 None:intergenic
TGTTCGGATCTGTAGGGATT+TGG 0.334733 3_4:-40789714 Msa0500420:CDS
TATGCTTGAAATCTGCTGTC+TGG 0.343200 3_4:-40782690 Msa0500420:three_prime_UTR
TATCTCTATCCTGCTTCCTT+TGG 0.344410 3_4:+40788784 None:intergenic
AGAGAGAAAAGCAAGGTTAC+AGG 0.348997 3_4:-40788019 Msa0500420:intron
CTTCATGCCCATGGTTCAGC+AGG 0.350116 3_4:-40783636 Msa0500420:CDS
CAATGACGTGGCGGCGGCTC+CGG 0.357222 3_4:-40789843 Msa0500420:CDS
CCTGCTCCCCGCCGTCCGCC+TGG 0.361646 3_4:+40783596 None:intergenic
TACCCGCAGCAACTGGTTCC+TGG 0.366368 3_4:-40783692 Msa0500420:CDS
TCTCAACAATCCCTAGGTTA+TGG 0.366487 3_4:-40789689 Msa0500420:CDS
ACCATGGGCATGAAGAAGTT+TGG 0.373711 3_4:+40783644 None:intergenic
CCCTGCTGGTGTTCCTGGGA+TGG 0.390484 3_4:-40784056 Msa0500420:CDS
GCACCACCTGGTCTCATTCC+AGG 0.392663 3_4:+40783674 None:intergenic
CGTGTCTATCGATATCCTTC+TGG 0.397105 3_4:-40783421 Msa0500420:CDS
TCAGCGTCCAGGCGGACGGC+GGG 0.403476 3_4:-40783603 Msa0500420:CDS
CCAGGCGGACGGCGGGGAGC+AGG 0.404491 3_4:-40783596 Msa0500420:CDS
CAGACCTGTTGCTGCATCAT+TGG 0.409615 3_4:+40783545 None:intergenic
CATCTGTAACCGACTCTGAT+AGG 0.413909 3_4:+40788718 None:intergenic
CAGGGAATTAGTAGGGGATC+TGG 0.415025 3_4:-40788233 Msa0500420:CDS
TATGATCAATTGCCCTGTCC+AGG 0.415385 3_4:+40788991 None:intergenic
TACTACATTGTTCGCGGAGC+GGG 0.419146 3_4:-40789999 Msa0500420:five_prime_UTR
AATGGCATTCGAGGTGCAAT+AGG 0.419626 3_4:+40784082 None:intergenic
GCATGAAGAAGTTTGGCATT+GGG 0.422495 3_4:+40783651 None:intergenic
TGCTGAGATGAATGGCAAAA+TGG 0.424613 3_4:-40788085 Msa0500420:CDS
TGTAATTACCTGAGATATGA+AGG 0.427155 3_4:+40784000 None:intergenic
CATGCACAATGTTGGCTGTT+CGG 0.436356 3_4:+40790087 None:intergenic
GGCATGAAGAAGTTTGGCAT+TGG 0.443157 3_4:+40783650 None:intergenic
TTGTTTCTGTTCGGATCTGT+AGG 0.445634 3_4:-40789721 Msa0500420:CDS
TGTTGGCCCTGCTGAACCAT+GGG 0.446639 3_4:+40783629 None:intergenic
TCGGTCAAGTTGTTTCTGTT+CGG 0.446639 3_4:-40789730 Msa0500420:CDS
GGCTGTAGCCAGAGCCTGCA+TGG 0.447002 3_4:+40783351 None:intergenic
GCGAAATGAAAACCCTAAAT+CGG 0.448748 3_4:+40789917 None:intergenic
CGCCTGGACGCTGACCTTGT+TGG 0.449222 3_4:+40783612 None:intergenic
CCATTGCTATCTTGCAAGAA+AGG 0.449772 3_4:+40788931 None:intergenic
TCCTCCAGCCTTCATATCTC+AGG 0.450243 3_4:-40784008 Msa0500420:intron
TTTACCCTGCTGGTGTTCCT+GGG 0.450834 3_4:-40784060 Msa0500420:CDS
TGCTTCCTCGGGAGTTGAAA+AGG 0.450958 3_4:+40788202 None:intergenic
GCAATAGGAGCCATTGTAAC+CGG 0.453114 3_4:+40784097 None:intergenic
TTGGTGAAGATAAATTGAAA+TGG 0.453294 3_4:+40789943 None:intergenic
ATTGCCAATGATGCAGCAAC+AGG 0.453322 3_4:-40783549 Msa0500420:intron
ATTTGGTTACCCGCAGCAAC+TGG 0.454612 3_4:-40783699 Msa0500420:CDS
GAGATCCACAGGGAATTAGT+AGG 0.456137 3_4:-40788241 Msa0500420:CDS
GACGTCGTTGTCAGATGATT+CGG 0.464012 3_4:+40789818 None:intergenic
CCCATCCCAGGAACACCAGC+AGG 0.464637 3_4:+40784055 None:intergenic
GACTAAAGTTGCTGAGGCCG+TGG 0.464712 3_4:-40783054 Msa0500420:CDS
TGATGATGCAGAACCTGGAC+AGG 0.468640 3_4:-40789004 Msa0500420:intron
GAATCGGTTTGTTGTTCAGT+GGG 0.469931 3_4:+40789480 None:intergenic
ACTTTAGTCTTGAGAGCCTC+TGG 0.470970 3_4:+40783068 None:intergenic
ACAGATTCTGCGAGATCCAC+AGG 0.472786 3_4:-40788252 Msa0500420:intron
TTGTTGGCCCTGCTGAACCA+TGG 0.474757 3_4:+40783628 None:intergenic
ATGCTTGAAATCTGCTGTCT+GGG 0.476446 3_4:-40782689 Msa0500420:three_prime_UTR
TGGAACGCCCATGCAGGCTC+TGG 0.477215 3_4:-40783359 Msa0500420:CDS
AGAGAAGCTAGTTGATCAGT+TGG 0.477475 3_4:+40782993 None:intergenic
TACAGCACGAGTTGCTTCCT+CGG 0.478169 3_4:+40788190 None:intergenic
ATCTCGGTAAACTGTCATGC+AGG 0.479765 3_4:+40782940 None:intergenic
CAGAAACAACTTGACCGATC+TGG 0.481273 3_4:+40789735 None:intergenic
GCACCACTCTTCCGAACACT+AGG 0.481441 3_4:+40789434 None:intergenic
CCTGCTGGTGTTCCTGGGAT+GGG 0.484295 3_4:-40784055 Msa0500420:CDS
ATTCCGATGCCAGGAGTAGC+TGG 0.486336 3_4:-40783382 Msa0500420:CDS
TATCGATAGACACGTCCTCT+TGG 0.487327 3_4:+40783430 None:intergenic
GGCGTTCCACCAGCTACTCC+TGG 0.488926 3_4:+40783373 None:intergenic
TTCAAAGAACGCATGTATCT+CGG 0.489583 3_4:+40782924 None:intergenic
CACTGAACAACAAACCGATT+CGG 0.490085 3_4:-40789478 Msa0500420:CDS
TTTGGCATTGGGGCACCACC+TGG 0.493082 3_4:+40783662 None:intergenic
ATGAATGGCAAAATGGTTGC+GGG 0.498816 3_4:-40788078 Msa0500420:CDS
CTGGAGCTGCAAAGGTTACT+GGG 0.499264 3_4:-40783139 Msa0500420:CDS
CTGGCATCGGAATACCTTGT+GGG 0.500780 3_4:+40783392 None:intergenic
GGCCAACAAGGTCAGCGTCC+AGG 0.502732 3_4:-40783614 Msa0500420:CDS
CGAATCGGTTTGTTGTTCAG+TGG 0.502963 3_4:+40789479 None:intergenic
CTTTCCATTGAGTGCCTCCA+CGG 0.505448 3_4:+40788569 None:intergenic
TTCCGCTACTACATTGTTCG+CGG 0.509275 3_4:-40790005 Msa0500420:five_prime_UTR
AGTGCAATTGACAAGTTAAA+CGG 0.509973 3_4:-40788846 Msa0500420:CDS
TAGTAGCGGAAGTGGAGAGA+GGG 0.510478 3_4:+40790017 None:intergenic
GATGCTTCTGGTCTGTCTAA+AGG 0.510690 3_4:-40788909 Msa0500420:CDS
CATGCTGCTCAACGATAAAC+CGG 0.510980 3_4:-40788823 Msa0500420:CDS
GAGAAGCTAGTTGATCAGTT+GGG 0.512991 3_4:+40782994 None:intergenic
TGAGCAGGAGCAACATAAAG+AGG 0.513452 3_4:+40788051 None:intergenic
ATGGGACAACAAATTATGTA+TGG 0.513951 3_4:-40784037 Msa0500420:CDS
TTGGCTTCTCAACAATCCCT+AGG 0.514758 3_4:-40789695 Msa0500420:CDS
AGCTGGTGGAACGCCCATGC+AGG 0.515799 3_4:-40783365 Msa0500420:CDS
AAGATAGCAATGGATGCTTC+TGG 0.515938 3_4:-40788921 Msa0500420:CDS
AGATCCACAGGGAATTAGTA+GGG 0.516201 3_4:-40788240 Msa0500420:CDS
TGGAAATGACCAACGTAGAC+CGG 0.518569 3_4:+40788804 None:intergenic
CATGAAGAAGTTTGGCATTG+GGG 0.520879 3_4:+40783652 None:intergenic
GCCAAACTTCTTCATGCCCA+TGG 0.522742 3_4:-40783645 Msa0500420:CDS
ATATGAAGGCTGGAGGAGCT+TGG 0.523155 3_4:+40784014 None:intergenic
TCGTAGCTTGCTGAGATGAA+TGG 0.525753 3_4:-40788093 Msa0500420:intron
GTTGTCAGATGATTCGGAAC+CGG 0.525867 3_4:+40789824 None:intergenic
CTCATCGCGACCCTAGTGTT+CGG 0.527657 3_4:-40789445 Msa0500420:CDS
GTCAGCGTCCAGGCGGACGG+CGG 0.528898 3_4:-40783604 Msa0500420:CDS
ATTACCTGAGATATGAAGGC+TGG 0.529283 3_4:+40784004 None:intergenic
TGGTCATTTCCAAAGGAAGC+AGG 0.530354 3_4:-40788793 Msa0500420:CDS
TCAATCAGATGCAACACCTC+AGG 0.532271 3_4:+40783095 None:intergenic
GTTCAGGAGGAGCATTTGCA+AGG 0.532273 3_4:+40783329 None:intergenic
TCTGGTCTGTCTAAAGGCTA+CGG 0.533319 3_4:-40788903 Msa0500420:CDS
AAAGCCGTGGAGGCACTCAA+TGG 0.533685 3_4:-40788573 Msa0500420:CDS
ACAGCACGAGTTGCTTCCTC+GGG 0.536352 3_4:+40788191 None:intergenic
TTCCAGGAACCAGTTGCTGC+GGG 0.536366 3_4:+40783690 None:intergenic
GATGACAAGGAGTGGTATGT+TGG 0.537605 3_4:-40788540 Msa0500420:CDS
GAACAATGTAGTAGCGGAAG+TGG 0.539241 3_4:+40790009 None:intergenic
GTAGAGAAGATTGAGCATGC+TGG 0.539286 3_4:-40783158 Msa0500420:CDS
AAGACATGAGCAGAGTATGA+AGG 0.540087 3_4:-40788475 Msa0500420:CDS
GCAGGGTAAAATGGCATTCG+AGG 0.543332 3_4:+40784073 None:intergenic
ATAATTTGTTGTCCCATCCC+AGG 0.547832 3_4:+40784043 None:intergenic
TGCTCAATCTTCTCTACTAG+AGG 0.548946 3_4:+40783164 None:intergenic
AAGGTCAGCGTCCAGGCGGA+CGG 0.552143 3_4:-40783607 Msa0500420:CDS
AAGATCGTAAAGCTGTGAAT+CGG 0.552323 3_4:+40789763 None:intergenic
TGTTTCTGTTCGGATCTGTA+GGG 0.553345 3_4:-40789720 Msa0500420:CDS
AATTGACATAACCATAACCT+AGG 0.557075 3_4:+40789678 None:intergenic
TGAGAATACATAATCCGAAT+CGG 0.557323 3_4:+40789464 None:intergenic
TGTGAACAATGACGTGGCGG+CGG 0.559915 3_4:-40789849 Msa0500420:CDS
TGAGCATGCTGGAGCTGCAA+AGG 0.560400 3_4:-40783147 Msa0500420:CDS
CCACAAGGTATTCCGATGCC+AGG 0.564133 3_4:-40783391 Msa0500420:CDS
GCAAGTGAGGCCGGTTACAA+TGG 0.565595 3_4:-40784107 Msa0500420:CDS
AAACTTGTATCTCAAGAACT+TGG 0.566366 3_4:-40788427 Msa0500420:CDS
GACCCTAGTGTTCGGAAGAG+TGG 0.566788 3_4:-40789437 Msa0500420:CDS
ATGGTTCAGCAGGGCCAACA+AGG 0.568025 3_4:-40783626 Msa0500420:CDS
TTATCTTAAGAGCAATGCTA+AGG 0.569193 3_4:-40782615 None:intergenic
CCTTTCTTGCAAGATAGCAA+TGG 0.569880 3_4:-40788931 Msa0500420:CDS
TGAATGGATTCATAGATGCT+TGG 0.574263 3_4:-40783200 Msa0500420:intron
AGTAGCGGAAGTGGAGAGAG+GGG 0.576045 3_4:+40790018 None:intergenic
GATGAATGGCAAAATGGTTG+CGG 0.576429 3_4:-40788079 Msa0500420:CDS
GCTGTAGCCAGAGCCTGCAT+GGG 0.576435 3_4:+40783352 None:intergenic
CTGGTTCCTGGAATGAGACC+AGG 0.580099 3_4:-40783680 Msa0500420:CDS
CCTGGCATCGGAATACCTTG+TGG 0.582727 3_4:+40783391 None:intergenic
TGGGTTGTGAAGTCATGAAA+AGG 0.583403 3_4:-40782670 Msa0500420:three_prime_UTR
TGAAGTTACTGTACCAAACT+CGG 0.583558 3_4:+40788365 None:intergenic
TGCATCATTGGCAATGAATG+TGG 0.584482 3_4:+40783557 None:intergenic
TGGCAGCGCATGCACAATGT+TGG 0.586071 3_4:+40790079 None:intergenic
TCAGATGCAACACCTCAGGC+TGG 0.586095 3_4:+40783099 None:intergenic
GCACAATGTTGGCTGTTCGG+AGG 0.588552 3_4:+40790090 None:intergenic
GCAATATGCTAGCTAATCCA+AGG 0.589078 3_4:+40782809 None:intergenic
TTCATGCCCATGGTTCAGCA+GGG 0.589406 3_4:-40783635 Msa0500420:CDS
AGAAATTTGATGACAAGGAG+TGG 0.592245 3_4:-40788548 Msa0500420:CDS
TCTACGTTGGTCATTTCCAA+AGG 0.593767 3_4:-40788800 Msa0500420:CDS
CCTTCTGGTCGCAACCCACA+AGG 0.595900 3_4:-40783406 Msa0500420:CDS
CAGCGTCCAGGCGGACGGCG+GGG 0.601413 3_4:-40783602 Msa0500420:CDS
ACAGTCCTCTGCTGTTCAGG+AGG 0.601576 3_4:+40783316 None:intergenic
TGGTACAGTAACTTCATGCA+AGG 0.601719 3_4:-40788358 Msa0500420:intron
CCTTGTGGGTTGCGACCAGA+AGG 0.601909 3_4:+40783406 None:intergenic
CCACCAGCTACTCCTGGCAT+CGG 0.607074 3_4:+40783379 None:intergenic
TTCAGGAGGAGCATTTGCAA+GGG 0.607198 3_4:+40783330 None:intergenic
TGGAAAGAAATTTGATGACA+AGG 0.609034 3_4:-40788553 Msa0500420:CDS
ATTCCAGGAACCAGTTGCTG+CGG 0.615044 3_4:+40783689 None:intergenic
CTACTACATTGTTCGCGGAG+CGG 0.616082 3_4:-40790000 Msa0500420:five_prime_UTR
GTAGTAATGAGAGATGTAGA+TGG 0.616292 3_4:-40788648 Msa0500420:CDS
AACGATAAACCGGTCTACGT+TGG 0.616304 3_4:-40788813 Msa0500420:CDS
TTTGGAGATGGACCAGCCTG+AGG 0.621857 3_4:-40783111 Msa0500420:CDS
GTAGTAGCGGAAGTGGAGAG+AGG 0.622177 3_4:+40790016 None:intergenic
ATGCTCCTCCTGAACAGCAG+AGG 0.623330 3_4:-40783321 Msa0500420:CDS
GCTCAATCTTCTCTACTAGA+GGG 0.623607 3_4:+40783165 None:intergenic
TGCTGCTGCTAAAGCCGTGG+AGG 0.626357 3_4:-40788583 Msa0500420:CDS
ACGTTTCAATCTCCGAACAA+TGG 0.626823 3_4:-40789888 Msa0500420:exon
ATTGACATAACCATAACCTA+GGG 0.628812 3_4:+40789679 None:intergenic
AACATTTCTCAACACATCCA+CGG 0.633247 3_4:+40783037 None:intergenic
CCGATGCCAGGAGTAGCTGG+TGG 0.636248 3_4:-40783379 Msa0500420:CDS
ACCTGAGATATGAAGGCTGG+AGG 0.642986 3_4:+40784007 None:intergenic
TCTCAAGACTAAAGTTGCTG+AGG 0.646425 3_4:-40783060 Msa0500420:CDS
AATTTCAGTAACCCTCATGA+CGG 0.648870 3_4:-40789659 Msa0500420:intron
CTCCGCGAACAATGTAGTAG+CGG 0.655189 3_4:+40790003 None:intergenic
AATCGGTTTGTTGTTCAGTG+GGG 0.658473 3_4:+40789481 None:intergenic
TCTCGGTAAACTGTCATGCA+GGG 0.659144 3_4:+40782941 None:intergenic
CACCACTCTTCCGAACACTA+GGG 0.663524 3_4:+40789435 None:intergenic
GATCCACAGGGAATTAGTAG+GGG 0.663558 3_4:-40788239 Msa0500420:CDS
GCATCATTGGCAATGAATGT+GGG 0.664288 3_4:+40783558 None:intergenic
CAGATTCTGCGAGATCCACA+GGG 0.664919 3_4:-40788251 Msa0500420:CDS
AAAAGGAAGAGAGAAAAGCA+AGG 0.668923 3_4:-40788026 Msa0500420:CDS
GAATGTGGGAGTTGTTGCAT+AGG 0.671262 3_4:+40783572 None:intergenic
CCATCCCAGGAACACCAGCA+GGG 0.678496 3_4:+40784056 None:intergenic
AGATGCTGCTGCTAAAGCCG+TGG 0.680131 3_4:-40788586 Msa0500420:CDS
CAACAAGGTCAGCGTCCAGG+CGG 0.681067 3_4:-40783611 Msa0500420:CDS
GCATCTGATTGAGTCACCAG+AGG 0.683305 3_4:-40783084 Msa0500420:CDS
GATGATGCAGAACCTGGACA+GGG 0.684090 3_4:-40789003 Msa0500420:intron
CGAGAATGTGAACAATGACG+TGG 0.696586 3_4:-40789855 Msa0500420:CDS
ACAACGACGTCGTTGTACGT+CGG 0.715761 3_4:-40789806 Msa0500420:CDS
GATCCCCTACTAATTCCCTG+TGG 0.725738 3_4:+40788236 None:intergenic
GAATGTGAACAATGACGTGG+CGG 0.734927 3_4:-40789852 Msa0500420:CDS
GTTCCTGGAATGAGACCAGG+TGG 0.758688 3_4:-40783677 Msa0500420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTAATATAATATAATT+AGG + chr3_4:40788326-40788345 None:intergenic 0.0%
!! TTATTAAATTAACAAAAACA+TGG + chr3_4:40786739-40786758 None:intergenic 10.0%
!!! ATTTGTTTCTTTATTTAATA+AGG + chr3_4:40788040-40788059 None:intergenic 10.0%
!! AAACAAATCATAAAATATAT+TGG - chr3_4:40788343-40788362 Msa0500420:intron 10.0%
!! AACAAATCATAAAATATATT+GGG - chr3_4:40788344-40788363 Msa0500420:intron 10.0%
!! AAATATTAATAATGATATCA+TGG - chr3_4:40788374-40788393 Msa0500420:CDS 10.0%
!! AATATTAATAATGATATCAT+GGG - chr3_4:40788375-40788394 Msa0500420:CDS 10.0%
!! AAAAAATAATAATGATATCA+TGG - chr3_4:40788412-40788431 Msa0500420:CDS 10.0%
!! AAAAATAATAATGATATCAT+GGG - chr3_4:40788413-40788432 Msa0500420:CDS 10.0%
!!! AAAGGTATATTTAATCTTTT+TGG + chr3_4:40782652-40782671 None:intergenic 15.0%
!!! TTTTTTTTTTCACAAATTTC+AGG - chr3_4:40783557-40783576 Msa0500420:CDS 15.0%
!!! TTTTTTTTTCACAAATTTCA+GGG - chr3_4:40783558-40783577 Msa0500420:CDS 15.0%
!! ATGTTTAATAATTCTGTTAT+TGG - chr3_4:40783664-40783683 Msa0500420:CDS 15.0%
!! TTTATTAAAATCAAAGAACA+TGG + chr3_4:40784858-40784877 None:intergenic 15.0%
!!! AATCATGTAATTTTTTTGTT+TGG + chr3_4:40784901-40784920 None:intergenic 15.0%
!!! AAAATTACATGATTTTCATT+TGG - chr3_4:40784907-40784926 Msa0500420:intron 15.0%
!!! ACCTAATATAAAAAACTTTT+GGG + chr3_4:40784977-40784996 None:intergenic 15.0%
!!! AAAAGTTTTTTATATTAGGT+GGG - chr3_4:40784977-40784996 Msa0500420:intron 15.0%
!!! AAACTCTAAATCATTTTTAA+TGG - chr3_4:40785082-40785101 Msa0500420:intron 15.0%
!!! AAAGCATTAAACAAAAATTT+GGG + chr3_4:40785262-40785281 None:intergenic 15.0%
!!! CAGAAATTTGTTTTAAAAAA+AGG - chr3_4:40785755-40785774 Msa0500420:intron 15.0%
!! AAGATATAACATAATATGTA+TGG + chr3_4:40787284-40787303 None:intergenic 15.0%
!! TGAAAAACATTATAAAGAAA+AGG + chr3_4:40787460-40787479 None:intergenic 15.0%
!!! AGTTTTATTTAATTCAAATC+AGG - chr3_4:40787865-40787884 Msa0500420:intron 15.0%
!! TTTATGTTAATCATTAATGT+TGG - chr3_4:40788078-40788097 Msa0500420:CDS 15.0%
!! AACTAGTATTAGAATAAATA+GGG + chr3_4:40788294-40788313 None:intergenic 15.0%
!! AAACTAGTATTAGAATAAAT+AGG + chr3_4:40788295-40788314 None:intergenic 15.0%
!!! GATAAATTGAAATGGTTTTT+AGG + chr3_4:40782757-40782776 None:intergenic 20.0%
!!! TGTTAACTTGTATCTAATTT+AGG - chr3_4:40783428-40783447 Msa0500420:CDS 20.0%
!!! TTTTTTTTCACAAATTTCAG+GGG - chr3_4:40783559-40783578 Msa0500420:CDS 20.0%
!! TTGATCATATTCAAATCTAT+TGG - chr3_4:40784586-40784605 Msa0500420:intron 20.0%
!!! ACCCAAAAGTTTTTTATATT+AGG - chr3_4:40784973-40784992 Msa0500420:intron 20.0%
!!! CACCTAATATAAAAAACTTT+TGG + chr3_4:40784978-40784997 None:intergenic 20.0%
!!! CAAAAGTTTTTTATATTAGG+TGG - chr3_4:40784976-40784995 Msa0500420:intron 20.0%
!!! AAAGTTTTTTATATTAGGTG+GGG - chr3_4:40784978-40784997 Msa0500420:intron 20.0%
!!! ATTTGAAAATTTTGATCCAT+CGG + chr3_4:40785008-40785027 None:intergenic 20.0%
!! AAGCATTAAACAAAAATTTG+GGG + chr3_4:40785261-40785280 None:intergenic 20.0%
!!! GAAAGCATTAAACAAAAATT+TGG + chr3_4:40785263-40785282 None:intergenic 20.0%
!!! TTTAAAAAAGCACAAACAAT+TGG + chr3_4:40785734-40785753 None:intergenic 20.0%
!! AAAAAAAAAATTACGAGATC+AGG + chr3_4:40786218-40786237 None:intergenic 20.0%
!! ATGAAATTTCCAATGAAATT+TGG + chr3_4:40786270-40786289 None:intergenic 20.0%
!!! ATGCTTTTTATAGATACTAA+AGG + chr3_4:40787365-40787384 None:intergenic 20.0%
!! TGACTTATCTGAAAATAATA+GGG - chr3_4:40787936-40787955 Msa0500420:intron 20.0%
!!! AAAATATTTTTACAGTACCT+TGG - chr3_4:40788141-40788160 Msa0500420:intron 20.0%
!! ACTAGTATTAGAATAAATAG+GGG + chr3_4:40788293-40788312 None:intergenic 20.0%
!! TTAACTAAAATGTGAAGAAT+TGG + chr3_4:40788842-40788861 None:intergenic 20.0%
!! GGTATATTTAATCTTTTTGG+TGG + chr3_4:40782649-40782668 None:intergenic 25.0%
! GGGTAAAAACAATGAAAAAA+AGG + chr3_4:40782670-40782689 None:intergenic 25.0%
! TTGGTGAAGATAAATTGAAA+TGG + chr3_4:40782765-40782784 None:intergenic 25.0%
! TGCATTAAAATTTCACGAAA+CGG + chr3_4:40783092-40783111 None:intergenic 25.0%
!!! TTTCGTGAAATTTTAATGCA+TGG - chr3_4:40783092-40783111 Msa0500420:CDS 25.0%
!!! TGAAATTTTAATGCATGGTT+AGG - chr3_4:40783097-40783116 Msa0500420:CDS 25.0%
!!! GAAATTTTAATGCATGGTTA+GGG - chr3_4:40783098-40783117 Msa0500420:CDS 25.0%
! ATTAGATACAAGTTAACAGA+AGG + chr3_4:40783426-40783445 None:intergenic 25.0%
! AATTTAGGAAAATTAGTTCC+TGG - chr3_4:40783443-40783462 Msa0500420:intron 25.0%
! GAAAAAAAAAACCAAGAACT+CGG + chr3_4:40783548-40783567 None:intergenic 25.0%
!! TATGATACCTTTTCGATTTT+TGG - chr3_4:40783745-40783764 Msa0500420:intron 25.0%
! GATATTTCCAAAAATCGAAA+AGG + chr3_4:40783755-40783774 None:intergenic 25.0%
!!! AAGAACATTTTTGGAGAATA+TGG - chr3_4:40784018-40784037 Msa0500420:CDS 25.0%
!! GATGGTAAATCAAAATGTTT+TGG - chr3_4:40784075-40784094 Msa0500420:CDS 25.0%
! AAGCCCTAAAAAAATATGAA+AGG - chr3_4:40784190-40784209 Msa0500420:intron 25.0%
! AGCCCTAAAAAAATATGAAA+GGG - chr3_4:40784191-40784210 Msa0500420:intron 25.0%
!!! CTCCCTTTCATATTTTTTTA+GGG + chr3_4:40784196-40784215 None:intergenic 25.0%
! CAGCAATTACTAAATAAAGT+TGG + chr3_4:40784556-40784575 None:intergenic 25.0%
!!! TATAAAAAACTTTTGGGTTG+TGG + chr3_4:40784971-40784990 None:intergenic 25.0%
! AAATAGAGACAATTCATGAT+AGG + chr3_4:40785052-40785071 None:intergenic 25.0%
!!! ATCCAATAGTTCTAGATAAA+GGG + chr3_4:40785133-40785152 None:intergenic 25.0%
!!! AATCCAATAGTTCTAGATAA+AGG + chr3_4:40785134-40785153 None:intergenic 25.0%
!!! TTTAGATGGATTAAGAAATG+TGG + chr3_4:40785205-40785224 None:intergenic 25.0%
! TGGATCAATGTAGTAAAAAA+AGG + chr3_4:40785300-40785319 None:intergenic 25.0%
! AATAAACTCAGAATTGCAAA+GGG + chr3_4:40785333-40785352 None:intergenic 25.0%
! AAATAAACTCAGAATTGCAA+AGG + chr3_4:40785334-40785353 None:intergenic 25.0%
! AAAGTACAAGTCATTCTTAA+AGG + chr3_4:40785423-40785442 None:intergenic 25.0%
! CAAAATGACATGGAATTAAA+GGG + chr3_4:40785501-40785520 None:intergenic 25.0%
! TCAAAATGACATGGAATTAA+AGG + chr3_4:40785502-40785521 None:intergenic 25.0%
! TCATTTGAGTAGAAGTAAAA+TGG + chr3_4:40785635-40785654 None:intergenic 25.0%
! TTTACTTCTACTCAAATGAA+AGG - chr3_4:40785636-40785655 Msa0500420:intron 25.0%
! GAAATGAAAAATTACAACTG+TGG + chr3_4:40785685-40785704 None:intergenic 25.0%
! AAACAAATTAGAAACTGACT+AGG + chr3_4:40785857-40785876 None:intergenic 25.0%
! TGAGAAAGAAAAAAGCAATT+GGG + chr3_4:40786114-40786133 None:intergenic 25.0%
! AAATTTGGCAAGAAATTCAA+TGG + chr3_4:40786255-40786274 None:intergenic 25.0%
! AATTTCTTGCCAAATTTCAT+TGG - chr3_4:40786258-40786277 Msa0500420:intron 25.0%
!!! ATTTGTGGTACTGATTATTT+CGG - chr3_4:40786813-40786832 Msa0500420:intron 25.0%
!! CTAAAAGTATGTTTGCAAAA+TGG - chr3_4:40787045-40787064 Msa0500420:intron 25.0%
!! GCATGACAAAATTTTCAAAA+AGG - chr3_4:40787187-40787206 Msa0500420:intron 25.0%
!! ATTCTAGTGATTTTCTCATA+AGG - chr3_4:40787217-40787236 Msa0500420:intron 25.0%
! TGATCATTTCTATAAGGAAA+AGG - chr3_4:40787564-40787583 Msa0500420:intron 25.0%
! ATTTATCATCCCATAAAACA+TGG + chr3_4:40787677-40787696 None:intergenic 25.0%
! TTATCAGATTATCTTGTGAA+AGG - chr3_4:40787824-40787843 Msa0500420:intron 25.0%
! GTGACTTATCTGAAAATAAT+AGG - chr3_4:40787935-40787954 Msa0500420:intron 25.0%
!! TCTGAAAATAATAGGGTTTT+AGG - chr3_4:40787943-40787962 Msa0500420:intron 25.0%
! GATTAACATAAATGAGAGAA+GGG + chr3_4:40788070-40788089 None:intergenic 25.0%
! TGATTAACATAAATGAGAGA+AGG + chr3_4:40788071-40788090 None:intergenic 25.0%
!!! AATTTTTTTCACCTAGCTTA+TGG - chr3_4:40788513-40788532 Msa0500420:CDS 25.0%
!!! ATTTCCTTTTTTCTTTCTTC+TGG - chr3_4:40788539-40788558 Msa0500420:CDS 25.0%
! GATACAGATTCAATAAAATG+AGG + chr3_4:40788955-40788974 None:intergenic 25.0%
ATTGACATAACCATAACCTA+GGG + chr3_4:40783029-40783048 None:intergenic 30.0%
AATTGACATAACCATAACCT+AGG + chr3_4:40783030-40783049 None:intergenic 30.0%
AAAAAAACTAACCGTCATGA+GGG + chr3_4:40783060-40783079 None:intergenic 30.0%
AAAAAAAACTAACCGTCATG+AGG + chr3_4:40783061-40783080 None:intergenic 30.0%
TGAGAATACATAATCCGAAT+CGG + chr3_4:40783244-40783263 None:intergenic 30.0%
! TGCTGCTAATATTTTCATCA+AGG - chr3_4:40783291-40783310 Msa0500420:intron 30.0%
TTTCCTATTCGTAAATGTCA+AGG + chr3_4:40783367-40783386 None:intergenic 30.0%
TTGAATTATGTCGAGTAACT+TGG - chr3_4:40783399-40783418 Msa0500420:CDS 30.0%
GTTAGTAAGTGATATAATCC+AGG + chr3_4:40783464-40783483 None:intergenic 30.0%
ATTCAACTCCTGAAATTGTA+GGG + chr3_4:40783599-40783618 None:intergenic 30.0%
TACAATTTCAGGAGTTGAAT+GGG - chr3_4:40783599-40783618 Msa0500420:CDS 30.0%
CAGATTCTTCATTCTCAAAT+TGG + chr3_4:40783834-40783853 None:intergenic 30.0%
AGTGCAATTGACAAGTTAAA+CGG - chr3_4:40783859-40783878 Msa0500420:intron 30.0%
! TGGAAAGAAATTTGATGACA+AGG - chr3_4:40784152-40784171 Msa0500420:intron 30.0%
!!! GCTCCCTTTCATATTTTTTT+AGG + chr3_4:40784197-40784216 None:intergenic 30.0%
! GAAACTGTTGACAAGTTTTA+TGG - chr3_4:40784252-40784271 Msa0500420:intron 30.0%
AAACTTGTATCTCAAGAACT+TGG - chr3_4:40784278-40784297 Msa0500420:intron 30.0%
ATTGCAGATATGAACAGAAA+GGG + chr3_4:40784389-40784408 None:intergenic 30.0%
AATTGCAGATATGAACAGAA+AGG + chr3_4:40784390-40784409 None:intergenic 30.0%
AGAAACATGAATTCATGCAT+TGG - chr3_4:40784778-40784797 Msa0500420:intron 30.0%
GAAACATGAATTCATGCATT+GGG - chr3_4:40784779-40784798 Msa0500420:intron 30.0%
TGATGAATCGTCATTAACAA+AGG + chr3_4:40784806-40784825 None:intergenic 30.0%
GACGATTCATCAATAATAGA+TGG - chr3_4:40784814-40784833 Msa0500420:intron 30.0%
!!! TTTTTTATATTAGGTGGGGT+TGG - chr3_4:40784982-40785001 Msa0500420:intron 30.0%
CTATTGGATTATCATCCATT+TGG - chr3_4:40785144-40785163 Msa0500420:intron 30.0%
ATAAACTCAGAATTGCAAAG+GGG + chr3_4:40785332-40785351 None:intergenic 30.0%
TGCCATGATATATGATATGT+GGG + chr3_4:40785363-40785382 None:intergenic 30.0%
!!! TCCATGTCATTTTGAATGAT+AGG - chr3_4:40785507-40785526 Msa0500420:intron 30.0%
AGGCTCAAGATACTTAAAAT+TGG - chr3_4:40785527-40785546 Msa0500420:intron 30.0%
!! GATACTTAAAATTGGTCTTG+AGG - chr3_4:40785535-40785554 Msa0500420:intron 30.0%
! TGAAATGTACGTTTTACAAC+AGG + chr3_4:40785606-40785625 None:intergenic 30.0%
AAATGAAAGGTCAAATGCTT+TGG - chr3_4:40785649-40785668 Msa0500420:intron 30.0%
GTGAGAAAGAAAAAAGCAAT+TGG + chr3_4:40786115-40786134 None:intergenic 30.0%
GAAAATAGTAAAAACAAGCC+TGG + chr3_4:40786159-40786178 None:intergenic 30.0%
ATTCAATGGCATTTGTGAAA+AGG + chr3_4:40786241-40786260 None:intergenic 30.0%
!! TAACCATTTTTGGAAATGTG+TGG + chr3_4:40786329-40786348 None:intergenic 30.0%
TTCCAAAAATGGTTATTTGC+TGG - chr3_4:40786334-40786353 Msa0500420:intron 30.0%
TCCAAAAATGGTTATTTGCT+GGG - chr3_4:40786335-40786354 Msa0500420:intron 30.0%
!!! ACTGGTTTTGATCTTATGTT+TGG - chr3_4:40786555-40786574 Msa0500420:intron 30.0%
!!! CTGGTTTTGATCTTATGTTT+GGG - chr3_4:40786556-40786575 Msa0500420:intron 30.0%
!! GCAAAATTACTTTTGTCCAA+CGG + chr3_4:40786595-40786614 None:intergenic 30.0%
!! TTTGTGGTACTGATTATTTC+GGG - chr3_4:40786814-40786833 Msa0500420:intron 30.0%
! ATTTCGGGAATTTCGTTTTA+TGG - chr3_4:40786829-40786848 Msa0500420:intron 30.0%
! TTTCGGGAATTTCGTTTTAT+GGG - chr3_4:40786830-40786849 Msa0500420:intron 30.0%
CTATAGCGTCATTTATGTTT+GGG + chr3_4:40787010-40787029 None:intergenic 30.0%
TCTATAGCGTCATTTATGTT+TGG + chr3_4:40787011-40787030 None:intergenic 30.0%
CCAAAGTCATCAATATTTGT+AGG + chr3_4:40787141-40787160 None:intergenic 30.0%
! CCTACAAATATTGATGACTT+TGG - chr3_4:40787138-40787157 Msa0500420:intron 30.0%
! ATATTGATGACTTTGGTAGA+TGG - chr3_4:40787145-40787164 Msa0500420:intron 30.0%
CATATATGAAGTGTATAGCA+TGG - chr3_4:40787519-40787538 Msa0500420:intron 30.0%
GATGCATGATCATTTCTATA+AGG - chr3_4:40787558-40787577 Msa0500420:intron 30.0%
ATAAGGAAAAGGACTAGATA+TGG - chr3_4:40787575-40787594 Msa0500420:intron 30.0%
TAAGGAAAAGGACTAGATAT+GGG - chr3_4:40787576-40787595 Msa0500420:intron 30.0%
AAACATGGTATGTCTACTTT+GGG + chr3_4:40787662-40787681 None:intergenic 30.0%
AAAACATGGTATGTCTACTT+TGG + chr3_4:40787663-40787682 None:intergenic 30.0%
! AGTAGACATACCATGTTTTA+TGG - chr3_4:40787664-40787683 Msa0500420:intron 30.0%
! GTAGACATACCATGTTTTAT+GGG - chr3_4:40787665-40787684 Msa0500420:intron 30.0%
AATGATTCTGTAAACTCCAA+CGG + chr3_4:40787718-40787737 None:intergenic 30.0%
ATACCATCAATTTGACATAG+TGG - chr3_4:40787764-40787783 Msa0500420:intron 30.0%
TTTCCACTATGTCAAATTGA+TGG + chr3_4:40787770-40787789 None:intergenic 30.0%
! ACGTTTGGCATCTAATTTTA+AGG - chr3_4:40788174-40788193 Msa0500420:intron 30.0%
GGAAAAGAGATAATTAAGTG+TGG - chr3_4:40788195-40788214 Msa0500420:CDS 30.0%
! AAGTGTGGTTTCTAATTTTG+AGG - chr3_4:40788210-40788229 Msa0500420:CDS 30.0%
!! CTAATTTTGAGGAAAAGAGA+TGG - chr3_4:40788221-40788240 Msa0500420:CDS 30.0%
GTATTAGAATAAATAGGGGT+TGG + chr3_4:40788289-40788308 None:intergenic 30.0%
AGATGTTCTAACATGAATAG+AGG - chr3_4:40788445-40788464 Msa0500420:CDS 30.0%
GATGTTCTAACATGAATAGA+GGG - chr3_4:40788446-40788465 Msa0500420:CDS 30.0%
ATGTTCTAACATGAATAGAG+GGG - chr3_4:40788447-40788466 Msa0500420:CDS 30.0%
TGTTCCAGAAGAAAGAAAAA+AGG + chr3_4:40788546-40788565 None:intergenic 30.0%
ATTGTTTATGCATTTCGTTC+AGG - chr3_4:40788565-40788584 Msa0500420:CDS 30.0%
ATGGGACAACAAATTATGTA+TGG - chr3_4:40788668-40788687 Msa0500420:CDS 30.0%
TGTAATTACCTGAGATATGA+AGG + chr3_4:40788708-40788727 None:intergenic 30.0%
AACTGAGCAATAATATATGC+AGG - chr3_4:40788979-40788998 Msa0500420:CDS 30.0%
!! TTGTTGAGATGCTTTTTGTT+GGG - chr3_4:40789238-40789257 Msa0500420:intron 30.0%
ATGAGAAAATAGTCAGAAAC+TGG + chr3_4:40789419-40789438 None:intergenic 30.0%
GGAATTGTTTAATGTGCATT+AGG - chr3_4:40789457-40789476 Msa0500420:CDS 30.0%
!! TACTGACTTTGTTTCATGAA+TGG - chr3_4:40789489-40789508 Msa0500420:CDS 30.0%
! TTCGTTTCCTTTTTACTACT+TGG - chr3_4:40789933-40789952 Msa0500420:five_prime_UTR 30.0%
! TCTTCACCAAAAACCGATTT+AGG - chr3_4:40782775-40782794 Msa0500420:three_prime_UTR 35.0%
! CTTCACCAAAAACCGATTTA+GGG - chr3_4:40782776-40782795 Msa0500420:three_prime_UTR 35.0%
!! GAAAACCCTAAATCGGTTTT+TGG + chr3_4:40782784-40782803 None:intergenic 35.0%
GCGAAATGAAAACCCTAAAT+CGG + chr3_4:40782791-40782810 None:intergenic 35.0%
AAGATCGTAAAGCTGTGAAT+CGG + chr3_4:40782945-40782964 None:intergenic 35.0%
! TACGATCTTTTCAACCAGAT+CGG - chr3_4:40782956-40782975 Msa0500420:exon 35.0%
AATTTCAGTAACCCTCATGA+CGG - chr3_4:40783046-40783065 Msa0500420:CDS 35.0%
TTTAATGCATGGTTAGGGTT+AGG - chr3_4:40783103-40783122 Msa0500420:CDS 35.0%
TCTATCAACAAGAGCAAATG+CGG + chr3_4:40783134-40783153 None:intergenic 35.0%
CATCCTTGACATTTACGAAT+AGG - chr3_4:40783361-40783380 Msa0500420:CDS 35.0%
! GGTACTTTTGTTCACTTGTA+AGG + chr3_4:40783527-40783546 None:intergenic 35.0%
TTCAACTCCTGAAATTGTAG+GGG + chr3_4:40783598-40783617 None:intergenic 35.0%
CATTCAACTCCTGAAATTGT+AGG + chr3_4:40783600-40783619 None:intergenic 35.0%
CTACAATTTCAGGAGTTGAA+TGG - chr3_4:40783598-40783617 Msa0500420:CDS 35.0%
!! TTTTATGATGATGCAGAACC+TGG - chr3_4:40783696-40783715 Msa0500420:CDS 35.0%
TGTGAAAAACCTATCAGAGT+CGG - chr3_4:40783978-40783997 Msa0500420:intron 35.0%
! GACGACTTGAAGAACATTTT+TGG - chr3_4:40784009-40784028 Msa0500420:CDS 35.0%
GTAGTAATGAGAGATGTAGA+TGG - chr3_4:40784057-40784076 Msa0500420:CDS 35.0%
! AGAAATTTGATGACAAGGAG+TGG - chr3_4:40784157-40784176 Msa0500420:intron 35.0%
TGAAGTTACTGTACCAAACT+CGG + chr3_4:40784343-40784362 None:intergenic 35.0%
TTGCAGATATGAACAGAAAG+GGG + chr3_4:40784388-40784407 None:intergenic 35.0%
AAAAGGAAGAGAGAAAAGCA+AGG - chr3_4:40784679-40784698 Msa0500420:intron 35.0%
CTTTATAATTACAGCACGTG+TGG - chr3_4:40784747-40784766 Msa0500420:intron 35.0%
ACAATTCATGATAGGACGAT+AGG + chr3_4:40785044-40785063 None:intergenic 35.0%
! CACCCTTTATCTAGAACTAT+TGG - chr3_4:40785128-40785147 Msa0500420:intron 35.0%
GGTAAAGTCGTTAAACCAAA+TGG + chr3_4:40785162-40785181 None:intergenic 35.0%
GTTGGCAAAGTAACTTTAGA+TGG + chr3_4:40785219-40785238 None:intergenic 35.0%
GTCCCACATATCATATATCA+TGG - chr3_4:40785358-40785377 Msa0500420:intron 35.0%
CTGCCATGATATATGATATG+TGG + chr3_4:40785364-40785383 None:intergenic 35.0%
CACATATCATATATCATGGC+AGG - chr3_4:40785362-40785381 Msa0500420:intron 35.0%
GCCTATCATTCAAAATGACA+TGG + chr3_4:40785511-40785530 None:intergenic 35.0%
! TCCAATTTTCACCTCTAGTT+TGG - chr3_4:40785570-40785589 Msa0500420:intron 35.0%
TCCAAACTAGAGGTGAAAAT+TGG + chr3_4:40785574-40785593 None:intergenic 35.0%
GCATACAAATTCCAAACTAG+AGG + chr3_4:40785584-40785603 None:intergenic 35.0%
TTTCCTTTGACTATCCAACA+AGG - chr3_4:40785701-40785720 Msa0500420:intron 35.0%
AACCAAACTGCTAGAATGAA+TGG - chr3_4:40785901-40785920 Msa0500420:intron 35.0%
AATAGTAAAAACAAGCCTGG+AGG + chr3_4:40786156-40786175 None:intergenic 35.0%
TTACGAGATCAGGAAAAAAG+TGG + chr3_4:40786208-40786227 None:intergenic 35.0%
TGACCACACATTTCCAAAAA+TGG - chr3_4:40786323-40786342 Msa0500420:intron 35.0%
! CCAAAAATGGTTATTTGCTG+GGG - chr3_4:40786336-40786355 Msa0500420:intron 35.0%
! CAAAAATGGTTATTTGCTGG+GGG - chr3_4:40786337-40786356 Msa0500420:intron 35.0%
ATGAAATGCCCTGTATCAAA+AGG - chr3_4:40786371-40786390 Msa0500420:intron 35.0%
! TCACATGTCCTTTTGATACA+GGG + chr3_4:40786382-40786401 None:intergenic 35.0%
! TTCACATGTCCTTTTGATAC+AGG + chr3_4:40786383-40786402 None:intergenic 35.0%
CTTGAGTGGTGAATAATACA+CGG - chr3_4:40786472-40786491 Msa0500420:intron 35.0%
AACCAGTTCTCCATTTGAAA+CGG + chr3_4:40786542-40786561 None:intergenic 35.0%
!! TTTTGTCCAACGGATTTTAG+AGG + chr3_4:40786585-40786604 None:intergenic 35.0%
! CAGAACTTATGGAGCTTTTA+CGG + chr3_4:40786688-40786707 None:intergenic 35.0%
TTGGTGAGGAAATAACTAGA+TGG - chr3_4:40786893-40786912 Msa0500420:intron 35.0%
! TGACATAGTGGAAAGACTAA+AGG - chr3_4:40787776-40787795 Msa0500420:intron 35.0%
! GACATAGTGGAAAGACTAAA+GGG - chr3_4:40787777-40787796 Msa0500420:intron 35.0%
CTGATAATTTGACCATCACT+TGG + chr3_4:40787811-40787830 None:intergenic 35.0%
!!! AATAGGGTTTTAGGTAGTGT+AGG - chr3_4:40787952-40787971 Msa0500420:intron 35.0%
AAGGAAATAAGCCATAAGCT+AGG + chr3_4:40788527-40788546 None:intergenic 35.0%
! GAAGATCTCAATGTTTTCTG+CGG - chr3_4:40788783-40788802 Msa0500420:CDS 35.0%
TAATATATGCAGGCTGGATT+TGG - chr3_4:40788989-40789008 Msa0500420:CDS 35.0%
TCTGGTCATGCATTATATCT+GGG - chr3_4:40789179-40789198 Msa0500420:intron 35.0%
!! ACAAAAAGCATCTCAACAAC+AGG + chr3_4:40789237-40789256 None:intergenic 35.0%
!! GTTGTTGAGATGCTTTTTGT+TGG - chr3_4:40789237-40789256 Msa0500420:intron 35.0%
!! GATTTTTAGATGCATCCAAG+AGG - chr3_4:40789260-40789279 Msa0500420:intron 35.0%
! GACTATTTTCTCATCCCATT+TGG - chr3_4:40789425-40789444 Msa0500420:CDS 35.0%
ATTCCGTACTCAATCCAAAT+GGG + chr3_4:40789442-40789461 None:intergenic 35.0%
AATTCCGTACTCAATCCAAA+TGG + chr3_4:40789443-40789462 None:intergenic 35.0%
! TGAATGGATTCATAGATGCT+TGG - chr3_4:40789505-40789524 Msa0500420:CDS 35.0%
AACATTTCTCAACACATCCA+CGG + chr3_4:40789671-40789690 None:intergenic 35.0%
TTCAAAGAACGCATGTATCT+CGG + chr3_4:40789784-40789803 None:intergenic 35.0%
CCAGTAACCAAGTAGTAAAA+AGG + chr3_4:40789943-40789962 None:intergenic 35.0%
! CCTTTTTACTACTTGGTTAC+TGG - chr3_4:40789940-40789959 Msa0500420:five_prime_UTR 35.0%
TACTACTTGGTTACTGGATT+TGG - chr3_4:40789946-40789965 Msa0500420:five_prime_UTR 35.0%
! GTCTGTTTGACTTTGTTTCT+AGG - chr3_4:40789968-40789987 Msa0500420:five_prime_UTR 35.0%
ACGTTTCAATCTCCGAACAA+TGG - chr3_4:40782817-40782836 Msa0500420:three_prime_UTR 40.0%
!! TCGGTCAAGTTGTTTCTGTT+CGG - chr3_4:40782975-40782994 Msa0500420:CDS 40.0%
!! TTGTTTCTGTTCGGATCTGT+AGG - chr3_4:40782984-40783003 Msa0500420:CDS 40.0%
! TGTTTCTGTTCGGATCTGTA+GGG - chr3_4:40782985-40783004 Msa0500420:CDS 40.0%
TCTCAACAATCCCTAGGTTA+TGG - chr3_4:40783016-40783035 Msa0500420:CDS 40.0%
! TGACTGTTTTACAGCTGCAA+AGG - chr3_4:40783180-40783199 Msa0500420:CDS 40.0%
!! AATCGGTTTGTTGTTCAGTG+GGG + chr3_4:40783227-40783246 None:intergenic 40.0%
!! GAATCGGTTTGTTGTTCAGT+GGG + chr3_4:40783228-40783247 None:intergenic 40.0%
CACTGAACAACAAACCGATT+CGG - chr3_4:40783227-40783246 Msa0500420:intron 40.0%
!! TTTCGCCCTCTGAAATTGTA+GGG - chr3_4:40783327-40783346 Msa0500420:CDS 40.0%
CCTAACCCTACAATTTCAGA+GGG + chr3_4:40783335-40783354 None:intergenic 40.0%
!! GAACAAAAGTACCGAGTTCT+TGG - chr3_4:40783534-40783553 Msa0500420:intron 40.0%
TTTCTGACCCCTACAATTTC+AGG - chr3_4:40783588-40783607 Msa0500420:CDS 40.0%
CCATTGCTATCTTGCAAGAA+AGG + chr3_4:40783777-40783796 None:intergenic 40.0%
CCTTTCTTGCAAGATAGCAA+TGG - chr3_4:40783774-40783793 Msa0500420:intron 40.0%
AAGATAGCAATGGATGCTTC+TGG - chr3_4:40783784-40783803 Msa0500420:intron 40.0%
TCTACGTTGGTCATTTCCAA+AGG - chr3_4:40783905-40783924 Msa0500420:intron 40.0%
TATCTCTATCCTGCTTCCTT+TGG + chr3_4:40783924-40783943 None:intergenic 40.0%
AAGACATGAGCAGAGTATGA+AGG - chr3_4:40784230-40784249 Msa0500420:intron 40.0%
TGGTACAGTAACTTCATGCA+AGG - chr3_4:40784347-40784366 Msa0500420:intron 40.0%
TCATGCAAGGTGTGTGAATA+CGG - chr3_4:40784360-40784379 Msa0500420:intron 40.0%
AGATCCACAGGGAATTAGTA+GGG - chr3_4:40784465-40784484 Msa0500420:intron 40.0%
TGCTGAGATGAATGGCAAAA+TGG - chr3_4:40784620-40784639 Msa0500420:intron 40.0%
GATGAATGGCAAAATGGTTG+CGG - chr3_4:40784626-40784645 Msa0500420:intron 40.0%
ATGAATGGCAAAATGGTTGC+GGG - chr3_4:40784627-40784646 Msa0500420:intron 40.0%
AGAGAGAAAAGCAAGGTTAC+AGG - chr3_4:40784686-40784705 Msa0500420:intron 40.0%
CAGGTAATATTGCGCAACAA+TGG - chr3_4:40784705-40784724 Msa0500420:intron 40.0%
GTTTAGTCGATAGTTTCCCT+TGG - chr3_4:40785104-40785123 Msa0500420:intron 40.0%
TCTAGATAAAGGGTGACCAA+GGG + chr3_4:40785123-40785142 None:intergenic 40.0%
TTCTAGATAAAGGGTGACCA+AGG + chr3_4:40785124-40785143 None:intergenic 40.0%
!! GACTTTACCTGTGTTTCTAG+TGG - chr3_4:40785173-40785192 Msa0500420:intron 40.0%
GATAAGACCACTAGAAACAC+AGG + chr3_4:40785183-40785202 None:intergenic 40.0%
! AACATCAGTGGTGGAAAAGT+TGG + chr3_4:40785237-40785256 None:intergenic 40.0%
! AAAATTTGGGGCAACATCAG+TGG + chr3_4:40785249-40785268 None:intergenic 40.0%
TGTGCCATAGGATTCAAGAA+GGG + chr3_4:40785477-40785496 None:intergenic 40.0%
TTGTGCCATAGGATTCAAGA+AGG + chr3_4:40785478-40785497 None:intergenic 40.0%
GAATTAAAGGGTTGTGCCAT+AGG + chr3_4:40785489-40785508 None:intergenic 40.0%
AGTCCTTGTTGGATAGTCAA+AGG + chr3_4:40785707-40785726 None:intergenic 40.0%
TTTGACTATCCAACAAGGAC+TGG - chr3_4:40785706-40785725 Msa0500420:intron 40.0%
TTGACTATCCAACAAGGACT+GGG - chr3_4:40785707-40785726 Msa0500420:intron 40.0%
ACCATTCACAAAATGACACG+TGG - chr3_4:40785821-40785840 Msa0500420:intron 40.0%
!!! TCCACGTGTCATTTTGTGAA+TGG + chr3_4:40785825-40785844 None:intergenic 40.0%
! CAAAATGACACGTGGACTAT+TGG - chr3_4:40785829-40785848 Msa0500420:intron 40.0%
AAACTGCTAGAATGAATGGC+CGG - chr3_4:40785905-40785924 Msa0500420:intron 40.0%
AACACTGTACAGTTGCAAGT+GGG - chr3_4:40786019-40786038 Msa0500420:intron 40.0%
CAGGAAGCAATTAGAAGTCA+CGG + chr3_4:40786084-40786103 None:intergenic 40.0%
AAAAACAAGCCTGGAGGAAT+AGG + chr3_4:40786150-40786169 None:intergenic 40.0%
GAGATCAGGAAAAAAGTGGA+TGG + chr3_4:40786204-40786223 None:intergenic 40.0%
! CCCCAGCAAATAACCATTTT+TGG + chr3_4:40786339-40786358 None:intergenic 40.0%
AAGGACATGTGAAGCAGTAT+AGG - chr3_4:40786390-40786409 Msa0500420:intron 40.0%
! TCCACATGTCATTTCTTGAG+TGG - chr3_4:40786458-40786477 Msa0500420:intron 40.0%
ACCACTCAAGAAATGACATG+TGG + chr3_4:40786462-40786481 None:intergenic 40.0%
CACTAAGCATCCGTTTCAAA+TGG - chr3_4:40786529-40786548 Msa0500420:intron 40.0%
ATCCGTTTCAAATGGAGAAC+TGG - chr3_4:40786537-40786556 Msa0500420:intron 40.0%
!! AGCACAATTGTCACTTTCAC+TGG - chr3_4:40786640-40786659 Msa0500420:intron 40.0%
ACGGTTGGAGAAAATAACGA+GGG + chr3_4:40786669-40786688 None:intergenic 40.0%
TACGGTTGGAGAAAATAACG+AGG + chr3_4:40786670-40786689 None:intergenic 40.0%
! ACTTATGGAGCTTTTACGGT+TGG + chr3_4:40786684-40786703 None:intergenic 40.0%
TTAAGCCACTGCAGAACTTA+TGG + chr3_4:40786699-40786718 None:intergenic 40.0%
GCTCTTGTGTAAGACATTTG+TGG - chr3_4:40786798-40786817 Msa0500420:intron 40.0%
TGACAGTACTAGATGGCATT+GGG - chr3_4:40786855-40786874 Msa0500420:intron 40.0%
! TAGATGGCATTGGGTTCATT+GGG - chr3_4:40786864-40786883 Msa0500420:intron 40.0%
TGGGTTCATTGGGTTTGATT+TGG - chr3_4:40786874-40786893 Msa0500420:intron 40.0%
!! TCATTGGGTTTGATTTGGTG+AGG - chr3_4:40786879-40786898 Msa0500420:intron 40.0%
TACACACTTGACAGTACTCT+AGG - chr3_4:40786950-40786969 Msa0500420:intron 40.0%
! AAAAGCATGCAACGATGTTG+TGG - chr3_4:40787377-40787396 Msa0500420:intron 40.0%
ATGAAGTGTATAGCATGGCA+TGG - chr3_4:40787524-40787543 Msa0500420:intron 40.0%
AGTGGAAAGACTAAAGGGAT+TGG - chr3_4:40787782-40787801 Msa0500420:intron 40.0%
TTATCTTGTGAAAGGAGAGC+AGG - chr3_4:40787832-40787851 Msa0500420:intron 40.0%
GTAGTGTAGGAAAAGCAAGA+TGG - chr3_4:40787965-40787984 Msa0500420:intron 40.0%
AAGCAAGATGGATGAGACTT+TGG - chr3_4:40787977-40787996 Msa0500420:intron 40.0%
!! ATAATTTGTTGTCCCATCCC+AGG + chr3_4:40788665-40788684 None:intergenic 40.0%
ATTACCTGAGATATGAAGGC+TGG + chr3_4:40788704-40788723 None:intergenic 40.0%
TCATGTAGAATTAGACGCCA+TGG + chr3_4:40788814-40788833 None:intergenic 40.0%
ATTTCAGCAGTATGTGCCAT+AGG - chr3_4:40788879-40788898 Msa0500420:CDS 40.0%
GAGCAATAATATATGCAGGC+TGG - chr3_4:40788983-40789002 Msa0500420:CDS 40.0%
CATGAAGAAGTTTGGCATTG+GGG + chr3_4:40789056-40789075 None:intergenic 40.0%
GCATGAAGAAGTTTGGCATT+GGG + chr3_4:40789057-40789076 None:intergenic 40.0%
GCATCATTGGCAATGAATGT+GGG + chr3_4:40789150-40789169 None:intergenic 40.0%
TGCATCATTGGCAATGAATG+TGG + chr3_4:40789151-40789170 None:intergenic 40.0%
GTCTGGTCATGCATTATATC+TGG - chr3_4:40789178-40789197 Msa0500420:intron 40.0%
CATCCCATTTGGATTGAGTA+CGG - chr3_4:40789436-40789455 Msa0500420:CDS 40.0%
GCTCAATCTTCTCTACTAGA+GGG + chr3_4:40789543-40789562 None:intergenic 40.0%
TGCTCAATCTTCTCTACTAG+AGG + chr3_4:40789544-40789563 None:intergenic 40.0%
! AAAGGTTACTGGGATGCTTT+TGG - chr3_4:40789576-40789595 Msa0500420:intron 40.0%
TCTCAAGACTAAAGTTGCTG+AGG - chr3_4:40789645-40789664 Msa0500420:intron 40.0%
GAGAAGCTAGTTGATCAGTT+GGG + chr3_4:40789714-40789733 None:intergenic 40.0%
AGAGAAGCTAGTTGATCAGT+TGG + chr3_4:40789715-40789734 None:intergenic 40.0%
!! ACGTAACAGTTTTGTGCTTC+TGG - chr3_4:40789849-40789868 Msa0500420:CDS 40.0%
!!! GTTTTGTGCTTCTGGCTTTT+TGG - chr3_4:40789857-40789876 Msa0500420:CDS 40.0%
!! GTAGGATTAGCGATTTTCCT+TGG - chr3_4:40789879-40789898 Msa0500420:exon 40.0%
GCAATATGCTAGCTAATCCA+AGG + chr3_4:40789899-40789918 None:intergenic 40.0%
TATGCTTGAAATCTGCTGTC+TGG - chr3_4:40790015-40790034 Msa0500420:five_prime_UTR 40.0%
ATGCTTGAAATCTGCTGTCT+GGG - chr3_4:40790016-40790035 Msa0500420:five_prime_UTR 40.0%
TGGGTTGTGAAGTCATGAAA+AGG - chr3_4:40790035-40790054 Msa0500420:five_prime_UTR 40.0%
! CATGCACAATGTTGGCTGTT+CGG + chr3_4:40782621-40782640 None:intergenic 45.0%
! GAACAATGTAGTAGCGGAAG+TGG + chr3_4:40782699-40782718 None:intergenic 45.0%
TTCCGCTACTACATTGTTCG+CGG - chr3_4:40782700-40782719 Msa0500420:three_prime_UTR 45.0%
! CGTGATTTTGCGCCATTGTT+CGG + chr3_4:40782832-40782851 None:intergenic 45.0%
CGAGAATGTGAACAATGACG+TGG - chr3_4:40782850-40782869 Msa0500420:three_prime_UTR 45.0%
GAATGTGAACAATGACGTGG+CGG - chr3_4:40782853-40782872 Msa0500420:three_prime_UTR 45.0%
! GTTGTCAGATGATTCGGAAC+CGG + chr3_4:40782884-40782903 None:intergenic 45.0%
GACGTCGTTGTCAGATGATT+CGG + chr3_4:40782890-40782909 None:intergenic 45.0%
CAGAAACAACTTGACCGATC+TGG + chr3_4:40782973-40782992 None:intergenic 45.0%
TGTTCGGATCTGTAGGGATT+TGG - chr3_4:40782991-40783010 Msa0500420:CDS 45.0%
TTGGCTTCTCAACAATCCCT+AGG - chr3_4:40783010-40783029 Msa0500420:CDS 45.0%
! TTTTACAGCTGCAAAGGCGA+TGG - chr3_4:40783186-40783205 Msa0500420:CDS 45.0%
!! CGAATCGGTTTGTTGTTCAG+TGG + chr3_4:40783229-40783248 None:intergenic 45.0%
!! GTTTCGCCCTCTGAAATTGT+AGG - chr3_4:40783326-40783345 Msa0500420:CDS 45.0%
!! CCCTCTGAAATTGTAGGGTT+AGG - chr3_4:40783332-40783351 Msa0500420:CDS 45.0%
GCCTAACCCTACAATTTCAG+AGG + chr3_4:40783336-40783355 None:intergenic 45.0%
TATGATCAATTGCCCTGTCC+AGG + chr3_4:40783717-40783736 None:intergenic 45.0%
GATGCTTCTGGTCTGTCTAA+AGG - chr3_4:40783796-40783815 Msa0500420:intron 45.0%
TCTGGTCTGTCTAAAGGCTA+CGG - chr3_4:40783802-40783821 Msa0500420:intron 45.0%
CATGCTGCTCAACGATAAAC+CGG - chr3_4:40783882-40783901 Msa0500420:intron 45.0%
AACGATAAACCGGTCTACGT+TGG - chr3_4:40783892-40783911 Msa0500420:intron 45.0%
TGGAAATGACCAACGTAGAC+CGG + chr3_4:40783904-40783923 None:intergenic 45.0%
TGGTCATTTCCAAAGGAAGC+AGG - chr3_4:40783912-40783931 Msa0500420:intron 45.0%
! CATCTGTAACCGACTCTGAT+AGG + chr3_4:40783990-40784009 None:intergenic 45.0%
GATGACAAGGAGTGGTATGT+TGG - chr3_4:40784165-40784184 Msa0500420:intron 45.0%
GAGATCCACAGGGAATTAGT+AGG - chr3_4:40784464-40784483 Msa0500420:intron 45.0%
GATCCACAGGGAATTAGTAG+GGG - chr3_4:40784466-40784485 Msa0500420:intron 45.0%
!! TCGTAGCTTGCTGAGATGAA+TGG - chr3_4:40784612-40784631 Msa0500420:intron 45.0%
TGAGCAGGAGCAACATAAAG+AGG + chr3_4:40784657-40784676 None:intergenic 45.0%
TGTTGCTCCTGCTCAGAAAA+AGG - chr3_4:40784662-40784681 Msa0500420:intron 45.0%
! CTCTCTTCCTTTTTCTGAGC+AGG + chr3_4:40784672-40784691 None:intergenic 45.0%
TGTGCCCTTCTTGAATCCTA+TGG - chr3_4:40785470-40785489 Msa0500420:intron 45.0%
GAATGGTGAACAGTACACAC+TGG + chr3_4:40785808-40785827 None:intergenic 45.0%
GGCCATTCATTCTAGCAGTT+TGG + chr3_4:40785906-40785925 None:intergenic 45.0%
GAACACTGTACAGTTGCAAG+TGG - chr3_4:40786018-40786037 Msa0500420:intron 45.0%
TAGAAGTCACGGACAGCAAA+GGG + chr3_4:40786073-40786092 None:intergenic 45.0%
TTAGAAGTCACGGACAGCAA+AGG + chr3_4:40786074-40786093 None:intergenic 45.0%
!! AAAGCAATTGGGTGTTGAGC+AGG + chr3_4:40786103-40786122 None:intergenic 45.0%
! AAATGGTTATTTGCTGGGGG+TGG - chr3_4:40786340-40786359 Msa0500420:intron 45.0%
! AATGGTTATTTGCTGGGGGT+GGG - chr3_4:40786341-40786360 Msa0500420:intron 45.0%
GAGTGGTGAATAATACACGG+AGG - chr3_4:40786475-40786494 Msa0500420:intron 45.0%
!! GGGTTACCTCTAAAATCCGT+TGG - chr3_4:40786576-40786595 Msa0500420:intron 45.0%
!! GTGCTGCTTCTTTGTGAATG+TGG + chr3_4:40786625-40786644 None:intergenic 45.0%
AAGCTCCATAAGTTCTGCAG+TGG - chr3_4:40786691-40786710 Msa0500420:intron 45.0%
ATGGGTCTGACAGTACTAGA+TGG - chr3_4:40786848-40786867 Msa0500420:intron 45.0%
CTGACAGTACTAGATGGCAT+TGG - chr3_4:40786854-40786873 Msa0500420:intron 45.0%
! CTAGATGGCATTGGGTTCAT+TGG - chr3_4:40786863-40786882 Msa0500420:intron 45.0%
TCATGTTGTATACGCACCGT+TGG - chr3_4:40787699-40787718 Msa0500420:intron 45.0%
! AGGGATTGGTATCCAAGTGA+TGG - chr3_4:40787796-40787815 Msa0500420:intron 45.0%
CAAACGTAAGAGATCAGCCA+AGG + chr3_4:40788161-40788180 None:intergenic 45.0%
CTTGGCTGATCTCTTACGTT+TGG - chr3_4:40788159-40788178 Msa0500420:intron 45.0%
! AGGCACAATTTTCGCAAGTG+AGG - chr3_4:40788585-40788604 Msa0500420:CDS 45.0%
! ACAATTTTCGCAAGTGAGGC+CGG - chr3_4:40788589-40788608 Msa0500420:CDS 45.0%
GCAATAGGAGCCATTGTAAC+CGG + chr3_4:40788611-40788630 None:intergenic 45.0%
AATGGCATTCGAGGTGCAAT+AGG + chr3_4:40788626-40788645 None:intergenic 45.0%
! TGTTTTCTGCGGATGAACCA+TGG - chr3_4:40788794-40788813 Msa0500420:CDS 45.0%
! GCCATAGGTTCTGATGTATC+TGG - chr3_4:40788894-40788913 Msa0500420:CDS 45.0%
GCCAGATACATCAGAACCTA+TGG + chr3_4:40788898-40788917 None:intergenic 45.0%
GGCATGAAGAAGTTTGGCAT+TGG + chr3_4:40789058-40789077 None:intergenic 45.0%
ACCATGGGCATGAAGAAGTT+TGG + chr3_4:40789064-40789083 None:intergenic 45.0%
GAATGTGGGAGTTGTTGCAT+AGG + chr3_4:40789136-40789155 None:intergenic 45.0%
ATTGCCAATGATGCAGCAAC+AGG - chr3_4:40789156-40789175 Msa0500420:intron 45.0%
TATCGATAGACACGTCCTCT+TGG + chr3_4:40789278-40789297 None:intergenic 45.0%
CGTGTCTATCGATATCCTTC+TGG - chr3_4:40789284-40789303 Msa0500420:intron 45.0%
!! TTCAGGAGGAGCATTTGCAA+GGG + chr3_4:40789378-40789397 None:intergenic 45.0%
GTAGAGAAGATTGAGCATGC+TGG - chr3_4:40789547-40789566 Msa0500420:intron 45.0%
!! TACTGGGATGCTTTTGGAGA+TGG - chr3_4:40789582-40789601 Msa0500420:intron 45.0%
TCAATCAGATGCAACACCTC+AGG + chr3_4:40789613-40789632 None:intergenic 45.0%
!! ACTTTAGTCTTGAGAGCCTC+TGG + chr3_4:40789640-40789659 None:intergenic 45.0%
TCTCGGTAAACTGTCATGCA+GGG + chr3_4:40789767-40789786 None:intergenic 45.0%
ATCTCGGTAAACTGTCATGC+AGG + chr3_4:40789768-40789787 None:intergenic 45.0%
!! ACGTTACAGTTTTGTGCGTC+TGG - chr3_4:40789803-40789822 Msa0500420:CDS 45.0%
!!! GTTTTGTGCGTCTGGCTTTT+TGG - chr3_4:40789811-40789830 Msa0500420:CDS 45.0%
!!! TGTGCTTCTGGCTTTTTGGT+AGG - chr3_4:40789861-40789880 Msa0500420:CDS 45.0%
!!! AAAAGTTATAATATTTTTTT+TGG + chr3_4:40787321-40787340 None:intergenic 5.0%
! TAGTAGCGGAAGTGGAGAGA+GGG + chr3_4:40782691-40782710 None:intergenic 50.0%
CTCCGCGAACAATGTAGTAG+CGG + chr3_4:40782705-40782724 None:intergenic 50.0%
CTACTACATTGTTCGCGGAG+CGG - chr3_4:40782705-40782724 Msa0500420:three_prime_UTR 50.0%
TACTACATTGTTCGCGGAGC+GGG - chr3_4:40782706-40782725 Msa0500420:three_prime_UTR 50.0%
ACAACGACGTCGTTGTACGT+CGG - chr3_4:40782899-40782918 Msa0500420:three_prime_UTR 50.0%
CACCACTCTTCCGAACACTA+GGG + chr3_4:40783273-40783292 None:intergenic 50.0%
! TGATGATGCAGAACCTGGAC+AGG - chr3_4:40783701-40783720 Msa0500420:CDS 50.0%
GATGATGCAGAACCTGGACA+GGG - chr3_4:40783702-40783721 Msa0500420:CDS 50.0%
CTTTCCATTGAGTGCCTCCA+CGG + chr3_4:40784139-40784158 None:intergenic 50.0%
AGCGAACTGTTCTCCGAGTT+TGG - chr3_4:40784327-40784346 Msa0500420:intron 50.0%
TGTGGATCTCGCAGAATCTG+TGG + chr3_4:40784454-40784473 None:intergenic 50.0%
ACAGATTCTGCGAGATCCAC+AGG - chr3_4:40784453-40784472 Msa0500420:intron 50.0%
CAGATTCTGCGAGATCCACA+GGG - chr3_4:40784454-40784473 Msa0500420:intron 50.0%
GATCCCCTACTAATTCCCTG+TGG + chr3_4:40784472-40784491 None:intergenic 50.0%
CAGGGAATTAGTAGGGGATC+TGG - chr3_4:40784472-40784491 Msa0500420:intron 50.0%
! TGTTGCCTTTTCAACTCCCG+AGG - chr3_4:40784498-40784517 Msa0500420:intron 50.0%
TGCTTCCTCGGGAGTTGAAA+AGG + chr3_4:40784506-40784525 None:intergenic 50.0%
TACAGCACGAGTTGCTTCCT+CGG + chr3_4:40784518-40784537 None:intergenic 50.0%
! ATTTGGGGCAACATCAGTGG+TGG + chr3_4:40785246-40785265 None:intergenic 50.0%
CAATTGGTCCCAGTCCTTGT+TGG + chr3_4:40785718-40785737 None:intergenic 50.0%
AGGTCGTCACAAATGGCTCA+CGG - chr3_4:40785954-40785973 Msa0500420:intron 50.0%
!! ACAAATGGCTCACGGGTTAG+AGG - chr3_4:40785962-40785981 Msa0500420:intron 50.0%
CAACACTCCAAGTGTAGCGA+CGG + chr3_4:40785996-40786015 None:intergenic 50.0%
AGAAGTCACGGACAGCAAAG+GGG + chr3_4:40786072-40786091 None:intergenic 50.0%
GAGGAATAGGACGGAGAACA+AGG + chr3_4:40786137-40786156 None:intergenic 50.0%
ACAAGCCTGGAGGAATAGGA+CGG + chr3_4:40786146-40786165 None:intergenic 50.0%
TAGGTCATACTCAGCCGAGA+CGG - chr3_4:40786409-40786428 Msa0500420:intron 50.0%
GCAGGGTAAAATGGCATTCG+AGG + chr3_4:40788635-40788654 None:intergenic 50.0%
!!! CGAATGCCATTTTACCCTGC+TGG - chr3_4:40788635-40788654 Msa0500420:CDS 50.0%
GGAACACCAGCAGGGTAAAA+TGG + chr3_4:40788644-40788663 None:intergenic 50.0%
! TTTTACCCTGCTGGTGTTCC+TGG - chr3_4:40788644-40788663 Msa0500420:CDS 50.0%
TTTACCCTGCTGGTGTTCCT+GGG - chr3_4:40788645-40788664 Msa0500420:CDS 50.0%
ATATGAAGGCTGGAGGAGCT+TGG + chr3_4:40788694-40788713 None:intergenic 50.0%
TCCTCCAGCCTTCATATCTC+AGG - chr3_4:40788697-40788716 Msa0500420:CDS 50.0%
ACCTGAGATATGAAGGCTGG+AGG + chr3_4:40788701-40788720 None:intergenic 50.0%
ATTTGGTTACCCGCAGCAAC+TGG - chr3_4:40789006-40789025 Msa0500420:intron 50.0%
ATTCCAGGAACCAGTTGCTG+CGG + chr3_4:40789019-40789038 None:intergenic 50.0%
GCCAAACTTCTTCATGCCCA+TGG - chr3_4:40789060-40789079 Msa0500420:intron 50.0%
TTCATGCCCATGGTTCAGCA+GGG - chr3_4:40789070-40789089 Msa0500420:intron 50.0%
CAGACCTGTTGCTGCATCAT+TGG + chr3_4:40789163-40789182 None:intergenic 50.0%
CAATGATGCAGCAACAGGTC+TGG - chr3_4:40789161-40789180 Msa0500420:intron 50.0%
! CTGGCATCGGAATACCTTGT+GGG + chr3_4:40789316-40789335 None:intergenic 50.0%
!! GTTCAGGAGGAGCATTTGCA+AGG + chr3_4:40789379-40789398 None:intergenic 50.0%
CTTACAGTCCTCTGCTGTTC+AGG + chr3_4:40789395-40789414 None:intergenic 50.0%
CTGGAGCTGCAAAGGTTACT+GGG - chr3_4:40789566-40789585 Msa0500420:intron 50.0%
GCATCTGATTGAGTCACCAG+AGG - chr3_4:40789621-40789640 Msa0500420:intron 50.0%
!!! TGTGCGTCTGGCTTTTTGGT+AGG - chr3_4:40789815-40789834 Msa0500420:CDS 50.0%
TGGCAGCGCATGCACAATGT+TGG + chr3_4:40782629-40782648 None:intergenic 55.0%
! AGTAGCGGAAGTGGAGAGAG+GGG + chr3_4:40782690-40782709 None:intergenic 55.0%
! GTAGTAGCGGAAGTGGAGAG+AGG + chr3_4:40782692-40782711 None:intergenic 55.0%
TGTGAACAATGACGTGGCGG+CGG - chr3_4:40782856-40782875 Msa0500420:three_prime_UTR 55.0%
CTCATCGCGACCCTAGTGTT+CGG - chr3_4:40783260-40783279 Msa0500420:intron 55.0%
GACCCTAGTGTTCGGAAGAG+TGG - chr3_4:40783268-40783287 Msa0500420:intron 55.0%
GCACCACTCTTCCGAACACT+AGG + chr3_4:40783274-40783293 None:intergenic 55.0%
AGATGCTGCTGCTAAAGCCG+TGG - chr3_4:40784119-40784138 Msa0500420:CDS 55.0%
!! AAAGCCGTGGAGGCACTCAA+TGG - chr3_4:40784132-40784151 Msa0500420:intron 55.0%
ACAGCACGAGTTGCTTCCTC+GGG + chr3_4:40784517-40784536 None:intergenic 55.0%
!! TATTAGGTGGGGTTGGCCGA+TGG - chr3_4:40784989-40785008 Msa0500420:intron 55.0%
TTGCAAAGGGGATGCTGCTG+TGG + chr3_4:40785320-40785339 None:intergenic 55.0%
CTGCTAGAATGAATGGCCGG+TGG - chr3_4:40785908-40785927 Msa0500420:intron 55.0%
CCATTTGTGACGACCTCTCC+TGG + chr3_4:40785950-40785969 None:intergenic 55.0%
CCAGGAGAGGTCGTCACAAA+TGG - chr3_4:40785947-40785966 Msa0500420:intron 55.0%
GGTCGTCACAAATGGCTCAC+GGG - chr3_4:40785955-40785974 Msa0500420:intron 55.0%
CAGAAAGCCGTCGCTACACT+TGG - chr3_4:40785986-40786005 Msa0500420:intron 55.0%
ACGGACAGCAAAGGGGAGAT+GGG + chr3_4:40786065-40786084 None:intergenic 55.0%
GTTCTCCGTCCTATTCCTCC+AGG - chr3_4:40786138-40786157 Msa0500420:intron 55.0%
! TTATTTGCTGGGGGTGGGCA+TGG - chr3_4:40786346-40786365 Msa0500420:intron 55.0%
CAAAACCCTGCACACCGTCT+CGG + chr3_4:40786426-40786445 None:intergenic 55.0%
GCAAGTGAGGCCGGTTACAA+TGG - chr3_4:40788598-40788617 Msa0500420:CDS 55.0%
TTCCAGGAACCAGTTGCTGC+GGG + chr3_4:40789018-40789037 None:intergenic 55.0%
CTGGTTCCTGGAATGAGACC+AGG - chr3_4:40789025-40789044 Msa0500420:intron 55.0%
GTTCCTGGAATGAGACCAGG+TGG - chr3_4:40789028-40789047 Msa0500420:intron 55.0%
CTTCATGCCCATGGTTCAGC+AGG - chr3_4:40789069-40789088 Msa0500420:intron 55.0%
TGTTGGCCCTGCTGAACCAT+GGG + chr3_4:40789079-40789098 None:intergenic 55.0%
TTGTTGGCCCTGCTGAACCA+TGG + chr3_4:40789080-40789099 None:intergenic 55.0%
ATGGTTCAGCAGGGCCAACA+AGG - chr3_4:40789079-40789098 Msa0500420:intron 55.0%
! CCTGGCATCGGAATACCTTG+TGG + chr3_4:40789317-40789336 None:intergenic 55.0%
! CCACAAGGTATTCCGATGCC+AGG - chr3_4:40789314-40789333 Msa0500420:intron 55.0%
ATTCCGATGCCAGGAGTAGC+TGG - chr3_4:40789323-40789342 Msa0500420:intron 55.0%
ATGCTCCTCCTGAACAGCAG+AGG - chr3_4:40789384-40789403 Msa0500420:intron 55.0%
ACAGTCCTCTGCTGTTCAGG+AGG + chr3_4:40789392-40789411 None:intergenic 55.0%
TGAGCATGCTGGAGCTGCAA+AGG - chr3_4:40789558-40789577 Msa0500420:intron 55.0%
GCTGGAGCTGCAAAGGTTAC+TGG - chr3_4:40789565-40789584 Msa0500420:intron 55.0%
TTTGGAGATGGACCAGCCTG+AGG - chr3_4:40789594-40789613 Msa0500420:intron 55.0%
TCAGATGCAACACCTCAGGC+TGG + chr3_4:40789609-40789628 None:intergenic 55.0%
GACTAAAGTTGCTGAGGCCG+TGG - chr3_4:40789651-40789670 Msa0500420:intron 55.0%
TGCTGCTGCTAAAGCCGTGG+AGG - chr3_4:40784122-40784141 Msa0500420:intron 60.0%
GACAGCAAAGGGGAGATGGG+AGG + chr3_4:40786062-40786081 None:intergenic 60.0%
CACGGACAGCAAAGGGGAGA+TGG + chr3_4:40786066-40786085 None:intergenic 60.0%
CCATCCCAGGAACACCAGCA+GGG + chr3_4:40788652-40788671 None:intergenic 60.0%
CCTGCTGGTGTTCCTGGGAT+GGG - chr3_4:40788650-40788669 Msa0500420:CDS 60.0%
! TACCCGCAGCAACTGGTTCC+TGG - chr3_4:40789013-40789032 Msa0500420:intron 60.0%
GCACCACCTGGTCTCATTCC+AGG + chr3_4:40789034-40789053 None:intergenic 60.0%
! TTTGGCATTGGGGCACCACC+TGG + chr3_4:40789046-40789065 None:intergenic 60.0%
CAACAAGGTCAGCGTCCAGG+CGG - chr3_4:40789094-40789113 Msa0500420:intron 60.0%
! CCTTGTGGGTTGCGACCAGA+AGG + chr3_4:40789302-40789321 None:intergenic 60.0%
CCTTCTGGTCGCAACCCACA+AGG - chr3_4:40789299-40789318 Msa0500420:intron 60.0%
CCACCAGCTACTCCTGGCAT+CGG + chr3_4:40789329-40789348 None:intergenic 60.0%
GCTGTAGCCAGAGCCTGCAT+GGG + chr3_4:40789356-40789375 None:intergenic 60.0%
! ACGACCTCTCCTGGTGCCAG+CGG + chr3_4:40785941-40785960 None:intergenic 65.0%
ACTCAGCCGAGACGGTGTGC+AGG - chr3_4:40786417-40786436 Msa0500420:intron 65.0%
CTCAGCCGAGACGGTGTGCA+GGG - chr3_4:40786418-40786437 Msa0500420:intron 65.0%
CCCTGCTGGTGTTCCTGGGA+TGG - chr3_4:40788649-40788668 Msa0500420:CDS 65.0%
CCCATCCCAGGAACACCAGC+AGG + chr3_4:40788653-40788672 None:intergenic 65.0%
GGCCAACAAGGTCAGCGTCC+AGG - chr3_4:40789091-40789110 Msa0500420:intron 65.0%
CGCCTGGACGCTGACCTTGT+TGG + chr3_4:40789096-40789115 None:intergenic 65.0%
AAGGTCAGCGTCCAGGCGGA+CGG - chr3_4:40789098-40789117 Msa0500420:intron 65.0%
CCGATGCCAGGAGTAGCTGG+TGG - chr3_4:40789326-40789345 Msa0500420:intron 65.0%
GGCGTTCCACCAGCTACTCC+TGG + chr3_4:40789335-40789354 None:intergenic 65.0%
AGCTGGTGGAACGCCCATGC+AGG - chr3_4:40789340-40789359 Msa0500420:intron 65.0%
TGGAACGCCCATGCAGGCTC+TGG - chr3_4:40789346-40789365 Msa0500420:intron 65.0%
GGCTGTAGCCAGAGCCTGCA+TGG + chr3_4:40789357-40789376 None:intergenic 65.0%
CAATGACGTGGCGGCGGCTC+CGG - chr3_4:40782862-40782881 Msa0500420:three_prime_UTR 70.0%
TGCCAGCGGCGGCATTCCAC+CGG + chr3_4:40785927-40785946 None:intergenic 70.0%
! ACCTCTCCTGGTGCCAGCGG+CGG + chr3_4:40785938-40785957 None:intergenic 70.0%
GGAATGCCGCCGCTGGCACC+AGG - chr3_4:40785929-40785948 Msa0500420:intron 75.0%
GTCAGCGTCCAGGCGGACGG+CGG - chr3_4:40789101-40789120 Msa0500420:intron 75.0%
TCAGCGTCCAGGCGGACGGC+GGG - chr3_4:40789102-40789121 Msa0500420:intron 75.0%
! GGCCGGTGGAATGCCGCCGC+TGG - chr3_4:40785922-40785941 Msa0500420:intron 80.0%
! GCCGCCGCTGGCACCAGGAG+AGG - chr3_4:40785934-40785953 Msa0500420:intron 80.0%
! CAGCGTCCAGGCGGACGGCG+GGG - chr3_4:40789103-40789122 Msa0500420:intron 80.0%
! CCTGCTCCCCGCCGTCCGCC+TGG + chr3_4:40789112-40789131 None:intergenic 85.0%
! CCAGGCGGACGGCGGGGAGC+AGG - chr3_4:40789109-40789128 Msa0500420:intron 85.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 40782618 40790109 40782618 ID=Msa0500420;Name=Msa0500420
chr3_4 mRNA 40782618 40790109 40782618 ID=Msa0500420-mRNA-1;Parent=Msa0500420;Name=Msa0500420-mRNA-1;_AED=0.12;_eAED=0.12;_QI=218|1|1|1|1|1|9|347|622
chr3_4 exon 40782618 40783207 40782618 ID=Msa0500420-mRNA-1:exon:8383;Parent=Msa0500420-mRNA-1
chr3_4 exon 40783318 40783458 40783318 ID=Msa0500420-mRNA-1:exon:8382;Parent=Msa0500420-mRNA-1
chr3_4 exon 40783550 40783726 40783550 ID=Msa0500420-mRNA-1:exon:8381;Parent=Msa0500420-mRNA-1
chr3_4 exon 40784009 40784140 40784009 ID=Msa0500420-mRNA-1:exon:8380;Parent=Msa0500420-mRNA-1
chr3_4 exon 40788020 40788109 40788020 ID=Msa0500420-mRNA-1:exon:8379;Parent=Msa0500420-mRNA-1
chr3_4 exon 40788193 40788270 40788193 ID=Msa0500420-mRNA-1:exon:8378;Parent=Msa0500420-mRNA-1
chr3_4 exon 40788359 40789015 40788359 ID=Msa0500420-mRNA-1:exon:8377;Parent=Msa0500420-mRNA-1
chr3_4 exon 40789415 40789533 40789415 ID=Msa0500420-mRNA-1:exon:8376;Parent=Msa0500420-mRNA-1
chr3_4 exon 40789660 40790109 40789660 ID=Msa0500420-mRNA-1:exon:8375;Parent=Msa0500420-mRNA-1
chr3_4 five_prime_UTR 40789892 40790109 40789892 ID=Msa0500420-mRNA-1:five_prime_utr;Parent=Msa0500420-mRNA-1
chr3_4 CDS 40789660 40789891 40789660 ID=Msa0500420-mRNA-1:cds;Parent=Msa0500420-mRNA-1
chr3_4 CDS 40789415 40789533 40789415 ID=Msa0500420-mRNA-1:cds;Parent=Msa0500420-mRNA-1
chr3_4 CDS 40788359 40789015 40788359 ID=Msa0500420-mRNA-1:cds;Parent=Msa0500420-mRNA-1
chr3_4 CDS 40788193 40788270 40788193 ID=Msa0500420-mRNA-1:cds;Parent=Msa0500420-mRNA-1
chr3_4 CDS 40788020 40788109 40788020 ID=Msa0500420-mRNA-1:cds;Parent=Msa0500420-mRNA-1
chr3_4 CDS 40784009 40784140 40784009 ID=Msa0500420-mRNA-1:cds;Parent=Msa0500420-mRNA-1
chr3_4 CDS 40783550 40783726 40783550 ID=Msa0500420-mRNA-1:cds;Parent=Msa0500420-mRNA-1
chr3_4 CDS 40783318 40783458 40783318 ID=Msa0500420-mRNA-1:cds;Parent=Msa0500420-mRNA-1
chr3_4 CDS 40782965 40783207 40782965 ID=Msa0500420-mRNA-1:cds;Parent=Msa0500420-mRNA-1
chr3_4 three_prime_UTR 40782618 40782964 40782618 ID=Msa0500420-mRNA-1:three_prime_utr;Parent=Msa0500420-mRNA-1
Gene Sequence

>Msa0500420

ATGGCGCAAAATCACGAGAATGTGAACAATGACGTGGCGGCGGCTCCGGTTCCGAATCATCTGACAACGACGTCGTTGTACGTCGGAGATCTCGATCACGACGTCACCGATTCACAGCTTTACGATCTTTTCAACCAGATCGGTCAAGTTGTTTCTGTTCGGATCTGTAGGGATTTGGCTTCTCAACAATCCCTAGGTTATGGTTATGTCAATTTCAGTAACCCTCATGACGCTGCAAAGGCGATGGATGTGTTGAATTTCACCCCACTGAACAACAAACCGATTCGGATTATGTATTCTCATCGCGACCCTAGTGTTCGGAAGAGTGGTGCTGCTAATATTTTCATCAAGAACCTGGACAGGGCAATTGATCATAAAGCTTTATATGATACCTTTTCGATTTTTGGAAATATCCTTTCTTGCAAGATAGCAATGGATGCTTCTGGTCTGTCTAAAGGCTACGGTTTTGTCCAATTTGAGAATGAAGAATCTGCACAAAGTGCAATTGACAAGTTAAACGGCATGCTGCTCAACGATAAACCGGTCTACGTTGGTCATTTCCAAAGGAAGCAGGATAGAGATAATGCTTTGAGCAATGCGAAGTTTAATAATGTCTATGTGAAAAACCTATCAGAGTCGGTTACAGATGACGACTTGAAGAACATTTTTGGAGAATATGGAACTATTACTAGTGCTGTAGTAATGAGAGATGTAGATGGTAAATCAAAATGTTTTGGTTTTGTCAATTTTGAAAATGCAGATGCTGCTGCTAAAGCCGTGGAGGCACTCAATGGAAAGAAATTTGATGACAAGGAGTGGTATGTTGGAAAAGCCCTAAAAAAATATGAAAGGGAGCTTGAGCTGAAAGAAAGACATGAGCAGAGTATGAAGGAAACTGTTGACAAGTTTTATGGTGCAAACTTGTATCTCAAGAACTTGGATGATAGTGTCACTGATGAAAAACTTAGCGAACTGTTCTCCGAGTTTGGTACAGTAACTTCATGCAAGATTCTGCGAGATCCACAGGGAATTAGTAGGGGATCTGGATTTGTTGCCTTTTCAACTCCCGAGGAAGCAACTCGTGCTCTTGCTGAGATGAATGGCAAAATGGTTGCGGGCAAACCTCTTTATGTTGCTCCTGCTCAGAAAAAGGAAGAGAGAAAAGCAAGGTTACAGGCACAATTTTCGCAAGTGAGGCCGGTTACAATGGCTCCTATTGCACCTCGAATGCCATTTTACCCTGCTGGTGTTCCTGGGATGGGACAACAAATTATGTATGGCCAAGCTCCTCCAGCCTTCATATCTCAGGCTGGATTTGGTTACCCGCAGCAACTGGTTCCTGGAATGAGACCAGGTGGTGCCCCAATGCCAAACTTCTTCATGCCCATGGTTCAGCAGGGCCAACAAGGTCAGCGTCCAGGCGGACGGCGGGGAGCAGGTCCTATGCAACAACTCCCACATTCATTGCCAATGATGCAGCAACAGATGCATCCAAGAGGACGTGTCTATCGATATCCTTCTGGTCGCAACCCACAAGGTATTCCGATGCCAGGAGTAGCTGGTGGAACGCCCATGCAGGCTCTGGCTACAGCCCTTGCAAATGCTCCTCCTGAACAGCAGAGGACTATGCTTGGTGAAGTTTTATACCCTCTAGTAGAGAAGATTGAGCATGCTGGAGCTGCAAAGGTTACTGGGATGCTTTTGGAGATGGACCAGCCTGAGGTGTTGCATCTGATTGAGTCACCAGAGGCTCTCAAGACTAAAGTTGCTGAGGCCGTGGATGTGTTGAGAAATGTTGCACAGCAGCAATCAAACAGCCCAACTGATCAACTAGCTTCTCTCTCTCTTAACGACAATCTTGAGTCTTAG
Protein sequence

>Msa0500420

MAQNHENVNNDVAAAPVPNHLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAAKAMDVLNFTPLNNKPIRIMYSHRDPSVRKSGAANIFIKNLDRAIDHKALYDTFSIFGNILSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYVGHFQRKQDRDNALSNAKFNNVYVKNLSESVTDDDLKNIFGEYGTITSAVVMRDVDGKSKCFGFVNFENADAAAKAVEALNGKKFDDKEWYVGKALKKYERELELKERHEQSMKETVDKFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSCKILRDPQGISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVTMAPIAPRMPFYPAGVPGMGQQIMYGQAPPAFISQAGFGYPQQLVPGMRPGGAPMPNFFMPMVQQGQQGQRPGGRRGAGPMQQLPHSLPMMQQQMHPRGRVYRYPSGRNPQGIPMPGVAGGTPMQALATALANAPPEQQRTMLGEVLYPLVEKIEHAGAAKVTGMLLEMDQPEVLHLIESPEALKTKVAEAVDVLRNVAQQQSNSPTDQLASLSLNDNLES*