AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0244820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0244820 MtrunA17_Chr2g0325821 97.368 988 4 1 1 988 1 966 0.0 1981
Msa0244820 MtrunA17_Chr4g0041131 89.271 988 84 1 1 988 1 966 0.0 1806
Msa0244820 MtrunA17_Chr8g0360571 85.758 990 116 3 1 988 1 967 0.0 1738
Msa0244820 MtrunA17_Chr2g0315891 83.333 990 139 4 1 988 1 966 0.0 1682
Msa0244820 MtrunA17_Chr1g0198921 45.032 624 294 5 381 988 449 1039 6.70e-171 526
Msa0244820 MtrunA17_Chr1g0198921 39.576 283 155 6 99 381 71 337 1.56e-51 197
Msa0244820 MtrunA17_Chr0c01g0489521 45.227 639 285 8 381 988 548 1152 5.52e-167 520
Msa0244820 MtrunA17_Chr0c01g0489521 35.526 304 167 6 99 389 113 400 7.96e-47 182
Msa0244820 MtrunA17_Chr1g0148101 67.725 378 56 7 483 860 1 312 6.16e-158 467
Msa0244820 MtrunA17_Chr1g0148111 53.030 132 18 3 361 450 9 138 1.07e-29 115
Msa0244820 MtrunA17_Chr1g0148091 100.000 51 0 0 938 988 1 51 5.50e-28 107
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0244820 AT1G53310.2 84.328 989 132 2 1 988 1 967 0.0 1718
Msa0244820 AT1G53310.1 84.328 989 132 2 1 988 1 967 0.0 1718
Msa0244820 AT1G53310.3 84.328 989 132 2 1 988 1 967 0.0 1718
Msa0244820 AT3G14940.1 84.444 990 130 3 1 988 1 968 0.0 1709
Msa0244820 AT3G14940.2 84.444 990 130 3 1 988 1 968 0.0 1709
Msa0244820 AT2G42600.2 84.717 988 126 4 1 988 1 963 0.0 1709
Msa0244820 AT2G42600.1 84.717 988 126 4 1 988 1 963 0.0 1709
Msa0244820 AT2G42600.3 84.717 988 126 4 1 988 1 963 0.0 1709
Msa0244820 AT1G68750.1 45.631 618 287 6 387 988 448 1032 6.42e-172 530
Msa0244820 AT1G68750.1 35.526 304 175 6 99 397 71 358 1.24e-45 179
Msa0244820 AT3G42628.1 88.889 45 5 0 1 45 1 45 1.44e-18 80.5

Find 223 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGCTTAATTTGGCAAATT+TGG 0.085610 2_2:-23624677 Msa0244820:CDS
TTTAAAATGTTGCAGAATTT+TGG 0.096818 2_2:-23622879 Msa0244820:intron
CTGTTATCCAATTCTCTTCT+TGG 0.134229 2_2:-23623488 Msa0244820:CDS
ATATATGTATTTGTATAATT+TGG 0.153254 2_2:-23620419 Msa0244820:three_prime_UTR
TCGGAAATTTCTTCTGTCTT+AGG 0.162402 2_2:+23622337 None:intergenic
TACCCTTCATTGTCAAAATA+AGG 0.178646 2_2:+23620483 None:intergenic
ATATTATATAATAAAGAATT+TGG 0.194576 2_2:-23620321 Msa0244820:three_prime_UTR
ACAATCAATGGCCTTTCTTT+AGG 0.212782 2_2:-23621317 Msa0244820:CDS
GTTATGTTTAATATCAAAAT+TGG 0.216554 2_2:-23624900 Msa0244820:CDS
TGTAGGCTTGTAAGACATTA+AGG 0.216785 2_2:+23620648 None:intergenic
ACCGGAATGGCGTGCCCTTT+TGG 0.219753 2_2:-23621723 Msa0244820:CDS
AGAAGAAATTTCCGATGTTT+TGG 0.223228 2_2:-23622329 Msa0244820:CDS
AGGGCACGCCATTCCGGTTT+TGG 0.234797 2_2:+23621728 None:intergenic
TGAGATTTGGATTGGCAATT+TGG 0.247991 2_2:-23620364 Msa0244820:three_prime_UTR
TATAATAAAGAATTTGGTTT+TGG 0.249347 2_2:-23620315 Msa0244820:three_prime_UTR
TTACCAGTTTGGCTTGGTTT+TGG 0.250938 2_2:-23621402 Msa0244820:CDS
CATCTCTCTTTGAGGATTCA+TGG 0.255538 2_2:+23623054 None:intergenic
GCTACTTTCACGAGACAATT+TGG 0.257756 2_2:-23623593 Msa0244820:CDS
CAATCAATGGCCTTTCTTTA+GGG 0.264660 2_2:-23621316 Msa0244820:CDS
AGCCTCTTGAACTGTGTTAC+AGG 0.272801 2_2:-23622612 Msa0244820:CDS
GGAGCATAGGCCAGAGAAAT+TGG 0.276169 2_2:-23624770 Msa0244820:CDS
CAGTTTGATTAAACATTTAT+CGG 0.284710 2_2:+23620261 None:intergenic
GAAGAGTCAAACTGTTGATT+TGG 0.296372 2_2:-23624494 Msa0244820:CDS
TATTATGCCTGCCTGAGATT+TGG 0.301593 2_2:-23620377 Msa0244820:three_prime_UTR
GAACCTTATCGTGTCATTCT+TGG 0.301781 2_2:-23622838 Msa0244820:CDS
ATTCAACAAAACGAGGTTCT+TGG 0.307332 2_2:+23621654 None:intergenic
TGGATAACAGGAGCATTATA+TGG 0.310954 2_2:+23623501 None:intergenic
TACTATTCACGGCTCACTTC+GGG 0.314131 2_2:-23621867 Msa0244820:CDS
TTGCGGCAAGTTTCTACATT+TGG 0.315675 2_2:-23622535 Msa0244820:CDS
CAAGGTTTCATTTACCAGTT+TGG 0.316524 2_2:-23621413 Msa0244820:CDS
CGGAAATTTCTTCTGTCTTA+GGG 0.330972 2_2:+23622338 None:intergenic
ATGATAGGATACTCAGATTC+AGG 0.341531 2_2:-23622061 Msa0244820:CDS
CCAAGTTCCTCCAATTTCTC+TGG 0.341847 2_2:+23624760 None:intergenic
AACTAAGAGCTTGTCGTATA+AGG 0.343234 2_2:+23621239 None:intergenic
ACATTTGTCAAAGGAGTATA+TGG 0.345788 2_2:-23620579 Msa0244820:CDS
TCCAAAAGGGCACGCCATTC+CGG 0.346382 2_2:+23621722 None:intergenic
CTCCCATCCAAGAAGAGAAT+TGG 0.351377 2_2:+23623481 None:intergenic
CTCATCTTCACATGGTAATC+TGG 0.358625 2_2:+23620605 None:intergenic
GCAATGACGAGCTTCGTGTT+AGG 0.368896 2_2:-23623088 Msa0244820:CDS
GAAGTTATTGAACAATCGTT+TGG 0.369185 2_2:-23621830 Msa0244820:CDS
GAAGAATCTTCAAATGCTTC+AGG 0.372632 2_2:-23621346 Msa0244820:CDS
TGCGTTCCTCTGACCATTCT+CGG 0.377403 2_2:+23622419 None:intergenic
GCAACACCAGAGTTAGAATA+TGG 0.380854 2_2:-23621531 Msa0244820:CDS
CACACATCCCTTGTAACTTC+AGG 0.383093 2_2:+23623291 None:intergenic
CAAGAAGAGAATTGGATAAC+AGG 0.386648 2_2:+23623489 None:intergenic
CGTAGCCGTTGCTTTAAGTA+AGG 0.388601 2_2:+23620695 None:intergenic
CTTCTTGCTTTCCATTGATT+CGG 0.390127 2_2:+23622086 None:intergenic
TGATGCTCAGTTGAGACTAT+TGG 0.395059 2_2:-23625065 Msa0244820:CDS
GGAGTATGATGCTTTGTTGT+TGG 0.396140 2_2:-23625008 Msa0244820:CDS
TATCCAATTCTCTTCTTGGA+TGG 0.397742 2_2:-23623484 Msa0244820:CDS
ATTAACGTAGCAAAGGAGTT+TGG 0.402285 2_2:-23621980 Msa0244820:CDS
CCAGAGAAATTGGAGGAACT+TGG 0.403210 2_2:-23624760 Msa0244820:CDS
TCCTCCTGTGTCTCCAAAAC+CGG 0.404734 2_2:-23621741 Msa0244820:CDS
TCTCCAAAACCAAGCCAAAC+TGG 0.408191 2_2:+23621399 None:intergenic
AGTTCTCATTAGCTAATAAC+TGG 0.411418 2_2:+23622773 None:intergenic
CTTTAGGGTTACCATTGACT+TGG 0.411933 2_2:-23621301 Msa0244820:CDS
TCAAGTTCTTGCTTATCATC+TGG 0.412579 2_2:+23624000 None:intergenic
TTCAAATTGCATATAGAAGA+AGG 0.414598 2_2:-23624645 Msa0244820:CDS
ATGACACGATAAGGTTCGTT+TGG 0.415193 2_2:+23622844 None:intergenic
GAACTTCCCTCAGACAGCTT+TGG 0.415801 2_2:-23622286 Msa0244820:CDS
CCTGCTCTCATTTCATCTTG+TGG 0.418113 2_2:+23623621 None:intergenic
TGAAGCATTTGAAGATTCTT+CGG 0.419463 2_2:+23621348 None:intergenic
ACCCTTCATTGTCAAAATAA+GGG 0.420370 2_2:+23620484 None:intergenic
ACACAAGAGCTGTGTCCATT+TGG 0.425017 2_2:-23621216 Msa0244820:CDS
AATCGCTCCGAGCTATTCCT+TGG 0.425872 2_2:-23621455 Msa0244820:CDS
TCGTATAAGGAAGCAATCCC+GGG 0.426185 2_2:+23621252 None:intergenic
TTCAATATCTGACTCAGTTA+TGG 0.427469 2_2:+23624579 None:intergenic
AGAGAGGCACACAGACGTTA+TGG 0.427767 2_2:-23622476 Msa0244820:CDS
TTGTGATATATGAGTCTCTA+AGG 0.429244 2_2:+23620672 None:intergenic
CAATGACGAGCTTCGTGTTA+GGG 0.433700 2_2:-23623087 Msa0244820:CDS
ATCCAATTCTCTTCTTGGAT+GGG 0.436092 2_2:-23623483 Msa0244820:CDS
TACCTTGAGGAGAAAGCTCT+TGG 0.437664 2_2:+23621164 None:intergenic
AAAAGTCGCGCTACAGCAGC+AGG 0.443393 2_2:+23622130 None:intergenic
TGTGCCTCTCTGACTCTTGA+CGG 0.444073 2_2:+23622488 None:intergenic
ATTACAAAACACCTGGAGAT+TGG 0.448262 2_2:-23622448 Msa0244820:CDS
ATCAAACTGTTTATTTGTGA+AGG 0.450754 2_2:-23620247 None:intergenic
AGAGATGCAAAACATTATAT+CGG 0.451317 2_2:-23623038 Msa0244820:intron
TACCATTGACTTGGTTGAGA+TGG 0.453067 2_2:-23621292 Msa0244820:CDS
GTCGTATAAGGAAGCAATCC+CGG 0.455554 2_2:+23621251 None:intergenic
GGAAAGCAAGAAGTTATGAT+AGG 0.456460 2_2:-23622076 Msa0244820:CDS
TGTGCATTACAGGCAATCCT+AGG 0.458396 2_2:-23623320 Msa0244820:intron
CAGGTCGTCTATCTGCTGCT+TGG 0.460146 2_2:-23622030 Msa0244820:CDS
TTCACGAGACAATTTGGAAA+GGG 0.461021 2_2:-23623587 Msa0244820:CDS
GATCTCAGACGCTCACCAAA+TGG 0.463915 2_2:+23621201 None:intergenic
ATGCTAACTGGTCTTGATGC+TGG 0.466416 2_2:-23624733 Msa0244820:CDS
TGACAGCCATCTCATCCAAA+AGG 0.467508 2_2:+23621708 None:intergenic
AGGATTAAGTTACTGAAGAA+AGG 0.470355 2_2:-23624625 Msa0244820:CDS
CTTCTGTCTTAGGGAGATCA+TGG 0.470815 2_2:+23622347 None:intergenic
CTCATTTCATCTTGTGGTGT+AGG 0.471556 2_2:+23623627 None:intergenic
TCACTTCGGGTAACAGTTCA+AGG 0.472913 2_2:-23621854 Msa0244820:CDS
GAACTTGGGAATATGCTAAC+TGG 0.473063 2_2:-23624745 Msa0244820:CDS
TGGTACAGAAACCGAATCAA+TGG 0.473285 2_2:-23622097 Msa0244820:CDS
ATGATGCTTTGTTGTTGGAT+AGG 0.473945 2_2:-23625003 Msa0244820:CDS
CCTTATCGTGTCATTCTTGG+AGG 0.474642 2_2:-23622835 Msa0244820:CDS
AGCAATCCCGGGGTCTCCCT+TGG 0.478950 2_2:+23621263 None:intergenic
CAACTGTCCCACCTCGGCCG+TGG 0.479651 2_2:+23621939 None:intergenic
GTAGGCTTGTAAGACATTAA+GGG 0.481765 2_2:+23620649 None:intergenic
AGTTTAACAAGTTCTGCTGC+TGG 0.481818 2_2:+23620545 None:intergenic
CATTTGGACTTTCACTCGTA+AGG 0.482646 2_2:-23622519 Msa0244820:CDS
TGTTGCCATTGAGATGATAT+AGG 0.484931 2_2:+23622261 None:intergenic
AGGTCGTCTATCTGCTGCTT+GGG 0.485718 2_2:-23622029 Msa0244820:CDS
TACTCGTAACATTGAAAAGA+TGG 0.486930 2_2:-23625095 Msa0244820:CDS
ACGAATTTGCTTCAATGTGT+AGG 0.489412 2_2:+23620631 None:intergenic
AGCGATTCAATTCCTCCACT+TGG 0.492083 2_2:+23621471 None:intergenic
TGCTGCTTGGGCACTATACA+AGG 0.493125 2_2:-23622017 Msa0244820:CDS
AACCATCTCAACCAAGTCAA+TGG 0.493299 2_2:+23621290 None:intergenic
TTCAGGATATGTACAATCAA+TGG 0.494159 2_2:-23621329 Msa0244820:CDS
AGCTATCAGCAGAGTATGAA+GGG 0.496822 2_2:-23624792 Msa0244820:CDS
AGTGGAAAGCGTCCTCTCTT+CGG 0.497484 2_2:-23622370 Msa0244820:CDS
ACACATCCCTTGTAACTTCA+GGG 0.499346 2_2:+23623292 None:intergenic
CTTTGCTGCAAAAGCATGGA+AGG 0.500526 2_2:-23624435 Msa0244820:intron
ACTGAGTAGGATGAGCAGTT+AGG 0.501621 2_2:+23624470 None:intergenic
CGAGGTGGGACAGTTGGAAG+AGG 0.502376 2_2:-23621932 Msa0244820:CDS
CAGAGTATGAAGGGGAGCAT+AGG 0.503409 2_2:-23624783 Msa0244820:CDS
TTTCATTTACCAGTTTGGCT+TGG 0.503901 2_2:-23621408 Msa0244820:CDS
CAGAGGAACGCAGGCAGGAA+TGG 0.504858 2_2:-23622408 Msa0244820:CDS
ACACGATAAGGTTCGTTTGG+AGG 0.506679 2_2:+23622847 None:intergenic
TTATACAAATACATATATGA+TGG 0.507403 2_2:+23620424 None:intergenic
GGTCACAAGGATATTCTTGA+AGG 0.510569 2_2:-23620722 Msa0244820:CDS
ATTCGTCCATATTCTAACTC+TGG 0.510849 2_2:+23621525 None:intergenic
GGGACAGTTGGAAGAGGAGG+TGG 0.512943 2_2:-23621926 Msa0244820:CDS
AACCAAGAGCTTTCTCCTCA+AGG 0.513871 2_2:-23621166 Msa0244820:intron
GGATAACAGGAGCATTATAT+GGG 0.519923 2_2:+23623502 None:intergenic
ATGGTCAGAGGAACGCAGGC+AGG 0.520864 2_2:-23622413 Msa0244820:CDS
GTAACTTCAGGGGTCACCCT+AGG 0.521142 2_2:+23623303 None:intergenic
CCTCCAAGAATGACACGATA+AGG 0.522482 2_2:+23622835 None:intergenic
AAATTGCCAATCCAAATCTC+AGG 0.522515 2_2:+23620366 None:intergenic
CACGGCCGAGGTGGGACAGT+TGG 0.522597 2_2:-23621938 Msa0244820:CDS
GGGTGACCCCTGAAGTTACA+AGG 0.524447 2_2:-23623299 Msa0244820:CDS
TTTGTACTTCTCTCAGATAG+AGG 0.526417 2_2:-23623241 Msa0244820:CDS
GACATTCTTCAAGATTTGCA+TGG 0.529035 2_2:-23624974 Msa0244820:CDS
ATACTATTCACGGCTCACTT+CGG 0.530662 2_2:-23621868 Msa0244820:CDS
ACAATGTTCCACGGCCGAGG+TGG 0.531451 2_2:-23621947 Msa0244820:CDS
AGATTGGATCTTACCGAGAA+TGG 0.535671 2_2:-23622432 Msa0244820:CDS
CTCGGTAAGATCCAATCTCC+AGG 0.538115 2_2:+23622437 None:intergenic
TGCTATATTATCACAGCCAC+CGG 0.539753 2_2:-23621891 Msa0244820:CDS
GAGCTATCAGCAGAGTATGA+AGG 0.540932 2_2:-23624793 Msa0244820:CDS
TGAACTCAAGAAGACTCCTC+TGG 0.541474 2_2:-23624533 Msa0244820:CDS
TGCCTGCCTGAGATTTGGAT+TGG 0.544173 2_2:-23620372 Msa0244820:three_prime_UTR
GATAGAGGATCTCATGTTCG+AGG 0.545851 2_2:-23623226 Msa0244820:intron
CTGTGTCTCCAAAACCGGAA+TGG 0.549619 2_2:-23621736 Msa0244820:CDS
CAACAGCAAGCACATCAGAC+GGG 0.551140 2_2:+23622236 None:intergenic
CAGCCACCGGATACTATTCA+CGG 0.551556 2_2:-23621878 Msa0244820:CDS
CAGAGAAATTGGAGGAACTT+GGG 0.554710 2_2:-23624759 Msa0244820:CDS
CGATCTTTGCTGCAAAAGCA+TGG 0.556290 2_2:-23624439 Msa0244820:CDS
ACAATGAAGGGTATAGCTGC+TGG 0.557262 2_2:-23620473 Msa0244820:CDS
ATATACTCCTTTGACAAATG+TGG 0.557333 2_2:+23620581 None:intergenic
TGGTGCCTATATCATCTCAA+TGG 0.560831 2_2:-23622266 Msa0244820:CDS
TCCCTAGGTTGCTGGTCACA+AGG 0.562522 2_2:-23620735 Msa0244820:intron
GAAGCTTGCTCGATTTCTTG+CGG 0.563453 2_2:-23622552 Msa0244820:CDS
GTGTCATTCTTGGAGGTGTG+AGG 0.563552 2_2:-23622828 Msa0244820:CDS
GACAGCCATCTCATCCAAAA+GGG 0.564412 2_2:+23621709 None:intergenic
AATTTGCCAAATTAAGCATG+TGG 0.564728 2_2:+23624680 None:intergenic
CTGACAATGTTCCACGGCCG+AGG 0.565880 2_2:-23621950 Msa0244820:CDS
CTCTCAACGGCTGTTTGACG+TGG 0.568097 2_2:+23622194 None:intergenic
AGTGAGCCGTGAATAGTATC+CGG 0.570212 2_2:+23621872 None:intergenic
TTCTGATGATGATAAACTTG+TGG 0.572112 2_2:-23625029 Msa0244820:CDS
TCAATGGTAACCCTAAAGAA+AGG 0.572555 2_2:+23621306 None:intergenic
CAATTCTCTTCTTGGATGGG+AGG 0.575854 2_2:-23623480 Msa0244820:CDS
TCAGATTCAGGAAAAGATGC+AGG 0.576677 2_2:-23622049 Msa0244820:CDS
CGAAAATCCAAGGAATAGCT+CGG 0.577857 2_2:+23621448 None:intergenic
CTCTTCCAACTGTCCCACCT+CGG 0.579286 2_2:+23621933 None:intergenic
AGCTTCCATCTGCTATTGAT+CGG 0.579634 2_2:+23622569 None:intergenic
GTAGCCGTTGCTTTAAGTAA+GGG 0.580388 2_2:+23620696 None:intergenic
GGCACTATACAAGGCTCAAG+AGG 0.580831 2_2:-23622008 Msa0244820:CDS
TGCCAATCCAAATCTCAGGC+AGG 0.582056 2_2:+23620370 None:intergenic
GACCTGTAACACAGTTCAAG+AGG 0.584130 2_2:+23622610 None:intergenic
TGATGAGGCTTTACAAAGAG+AGG 0.584519 2_2:-23623980 Msa0244820:intron
TGCTTTGGTAGTTGTCTATG+TGG 0.586126 2_2:-23623115 Msa0244820:intron
TGTCATTCTTGGAGGTGTGA+GGG 0.587488 2_2:-23622827 Msa0244820:CDS
TGTGTCCAAGCGAAAATCCA+AGG 0.590977 2_2:+23621438 None:intergenic
GGGAGATCATGGCCGAAGAG+AGG 0.592036 2_2:+23622358 None:intergenic
ATAGGCACCAAAGCTGTCTG+AGG 0.592123 2_2:+23622279 None:intergenic
ATTTGCCAAATTAAGCATGT+GGG 0.593218 2_2:+23624681 None:intergenic
TCAACAGCAAGCACATCAGA+CGG 0.594912 2_2:+23622235 None:intergenic
TATTGAACAATCGTTTGGAG+AGG 0.595426 2_2:-23621825 Msa0244820:CDS
TCACGAGACAATTTGGAAAG+GGG 0.597957 2_2:-23623586 Msa0244820:CDS
GATAATATAGCAAGATGAGT+AGG 0.600009 2_2:+23621902 None:intergenic
CCACAAGATGAAATGAGAGC+AGG 0.600554 2_2:-23623621 Msa0244820:CDS
GTGCATTACAGGCAATCCTA+GGG 0.600944 2_2:-23623319 Msa0244820:intron
TACAGGTCACTCTGTGCATG+TGG 0.601440 2_2:-23622595 Msa0244820:CDS
GATCGACGAATCGACTGAGT+AGG 0.604180 2_2:+23624457 None:intergenic
AACAGTGGGACAACTCTCAA+CGG 0.604239 2_2:+23622181 None:intergenic
TTCGCACTGATGAAATTCGA+AGG 0.605273 2_2:-23623656 Msa0244820:CDS
GGAACTCATTAACGTAGCAA+AGG 0.606640 2_2:-23621987 Msa0244820:CDS
GACACAGCTCTGAAGAACAT+TGG 0.606994 2_2:-23623540 Msa0244820:CDS
CAGATTACCATGTGAAGATG+AGG 0.608496 2_2:-23620604 Msa0244820:CDS
GAGACCCTTACTTAAAGCAA+CGG 0.608799 2_2:-23620700 Msa0244820:CDS
AGGGAAGTTCTGAAATGACA+TGG 0.609842 2_2:+23622299 None:intergenic
CAATGTTCCACGGCCGAGGT+GGG 0.610388 2_2:-23621946 Msa0244820:CDS
GGTGACCGATCAATAGCAGA+TGG 0.613687 2_2:-23622574 Msa0244820:CDS
GATGAGGCCACATTTGTCAA+AGG 0.613746 2_2:-23620588 Msa0244820:CDS
GGTGGGACAGTTGGAAGAGG+AGG 0.613749 2_2:-23621929 Msa0244820:CDS
GATGGCTGTCATTGCAACAA+AGG 0.614061 2_2:-23621696 Msa0244820:CDS
ATGGAAAGTTTCCAAAACAT+CGG 0.614492 2_2:+23622318 None:intergenic
GGACGCAATTACAAAACACC+TGG 0.620285 2_2:-23622455 Msa0244820:CDS
GAATATGGACGAATGAACAT+TGG 0.622611 2_2:-23621516 Msa0244820:CDS
TGAGTATGCTCCTGGTCTTG+AGG 0.624710 2_2:-23620510 Msa0244820:CDS
GTGTCTACTAGCTCGAATGA+TGG 0.626956 2_2:-23623271 Msa0244820:CDS
TTTCACGAGACAATTTGGAA+AGG 0.627919 2_2:-23623588 Msa0244820:CDS
AAAGCATCAAATACTTCCAG+AGG 0.632277 2_2:+23624517 None:intergenic
GCTGAAGTGTTCTAAAGCAT+AGG 0.636742 2_2:+23621798 None:intergenic
CGGAAGTATTCAACAAAACG+AGG 0.638889 2_2:+23621647 None:intergenic
TGATAAGCAAGAACTTGATG+AGG 0.638900 2_2:-23623995 Msa0244820:CDS
GCATAGGCCAGAGAAATTGG+AGG 0.639696 2_2:-23624767 Msa0244820:CDS
GAGAATGGTCAGAGGAACGC+AGG 0.647467 2_2:-23622417 Msa0244820:CDS
CACATCCCTTGTAACTTCAG+GGG 0.647779 2_2:+23623293 None:intergenic
TAGGCACCAAAGCTGTCTGA+GGG 0.649412 2_2:+23622280 None:intergenic
TCAAAACGAAAGCCAAGTGG+AGG 0.650753 2_2:-23621483 Msa0244820:CDS
AACAGCAAGCACATCAGACG+GGG 0.656009 2_2:+23622237 None:intergenic
ACTGCTGCTACACTCGAGCA+CGG 0.656852 2_2:-23621770 Msa0244820:CDS
ATAAGGGTATCCTCAAGACC+AGG 0.658078 2_2:+23620500 None:intergenic
GCTGCTGGCATGCAAAACAC+TGG 0.660961 2_2:-23620458 Msa0244820:CDS
CCATCAAAACGAAAGCCAAG+TGG 0.669883 2_2:-23621486 Msa0244820:CDS
GGTGACCCCTGAAGTTACAA+GGG 0.670298 2_2:-23623298 Msa0244820:CDS
GCTATCAGCAGAGTATGAAG+GGG 0.686527 2_2:-23624791 Msa0244820:CDS
GAGCCGTGAATAGTATCCGG+TGG 0.686653 2_2:+23621875 None:intergenic
GTTAAGCTGACAATGTTCCA+CGG 0.690620 2_2:-23621956 Msa0244820:CDS
TGGATGGGAGGAGATCGTGA+TGG 0.706606 2_2:-23623468 Msa0244820:intron
ACATCCGTCAAGAGTCAGAG+AGG 0.715570 2_2:-23622492 Msa0244820:CDS
AATGTGGCCTCATCTTCACA+TGG 0.715631 2_2:+23620597 None:intergenic
ATCTTACCGAGAATGGTCAG+AGG 0.718286 2_2:-23622425 Msa0244820:CDS
CGTATAAGGAAGCAATCCCG+GGG 0.724065 2_2:+23621253 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATGTATTTGTATAATT+TGG - chr2_2:23624930-23624949 Msa0244820:CDS 10.0%
!! GTTATGTTTAATATCAAAAT+TGG - chr2_2:23620449-23620468 Msa0244820:exon 15.0%
!! AATTTATACAGTACAATTTA+TGG - chr2_2:23621262-23621281 Msa0244820:CDS 15.0%
!!! ATTTATAAACATTTTGATTG+AGG - chr2_2:23621465-23621484 Msa0244820:CDS 15.0%
!! TTGATGAAAATTTATAATCA+CGG + chr2_2:23622171-23622190 None:intergenic 15.0%
!! GTTCAATTAATAATTCATAT+TGG - chr2_2:23622424-23622443 Msa0244820:CDS 15.0%
!! TTATACAAATACATATATGA+TGG + chr2_2:23624928-23624947 None:intergenic 15.0%
!!! TATAATAAAGAATTTGGTTT+TGG - chr2_2:23625034-23625053 Msa0244820:CDS 15.0%
!! ACATAACAAAAAGATAAGAA+AGG + chr2_2:23620436-23620455 None:intergenic 20.0%
!!! TCAAATATCAACTATTTTCA+AGG + chr2_2:23620475-23620494 None:intergenic 20.0%
!!! CACAATTTTTTCATCATTAT+TGG - chr2_2:23622358-23622377 Msa0244820:CDS 20.0%
!!! TTTAAAATGTTGCAGAATTT+TGG - chr2_2:23622470-23622489 Msa0244820:CDS 20.0%
!!! TTTTTTATCCTTGTAGTTTT+TGG - chr2_2:23622714-23622733 Msa0244820:intron 20.0%
!! TAAATGATTACAAAAATTGC+AGG + chr2_2:23624269-23624288 None:intergenic 20.0%
!!! TCACAAATGTTTTAAAAGTT+AGG - chr2_2:23624317-23624336 Msa0244820:intron 20.0%
!!! CGAATGTTTTAAAAATGAAT+TGG - chr2_2:23624395-23624414 Msa0244820:intron 20.0%
!! CCTTCATAAATATAATATCA+AGG + chr2_2:23624461-23624480 None:intergenic 20.0%
!! CCTTGATATTATATTTATGA+AGG - chr2_2:23624458-23624477 Msa0244820:CDS 20.0%
!! CAGTTTGATTAAACATTTAT+CGG + chr2_2:23625091-23625110 None:intergenic 20.0%
!!! TCATCATCAGAAACTTTTTT+TGG + chr2_2:23620312-23620331 None:intergenic 25.0%
! ATATTTGATGTATGTACTTG+TGG - chr2_2:23620487-23620506 Msa0244820:CDS 25.0%
! TTCAAATTGCATATAGAAGA+AGG - chr2_2:23620704-23620723 Msa0244820:CDS 25.0%
!!! GTCATAACTTAGTTTTGTTA+TGG - chr2_2:23620967-23620986 Msa0244820:intron 25.0%
!!! ATAACTTAGTTTTGTTATGG+TGG - chr2_2:23620970-23620989 Msa0244820:intron 25.0%
! AATAAGATGTTTATCCAAAC+AGG - chr2_2:23621193-23621212 Msa0244820:CDS 25.0%
!! CATTTATTGATTAAGCATCT+AGG + chr2_2:23621220-23621239 None:intergenic 25.0%
! AATAAATGTCCTGTAATTAC+AGG - chr2_2:23621232-23621251 Msa0244820:CDS 25.0%
! TTATAATGACCTGTAATTAC+AGG + chr2_2:23621244-23621263 None:intergenic 25.0%
! CTAACATCATATATTAAGCA+AGG + chr2_2:23621408-23621427 None:intergenic 25.0%
! GAATACTTGCGAAAATATTA+CGG + chr2_2:23621967-23621986 None:intergenic 25.0%
! AGAGATGCAAAACATTATAT+CGG - chr2_2:23622311-23622330 Msa0244820:CDS 25.0%
! GATGAAAAAATTGTGCAATT+TGG + chr2_2:23622353-23622372 None:intergenic 25.0%
! TTTCATTGATACTTACACAT+CGG + chr2_2:23623725-23623744 None:intergenic 25.0%
! TTATGAATGTTATGAAATGC+AGG - chr2_2:23623796-23623815 Msa0244820:intron 25.0%
!!! AAATGTTTTAAAAGTTAGGC+CGG - chr2_2:23624321-23624340 Msa0244820:intron 25.0%
!!! CATTTTTAAAACATTCGATC+CGG + chr2_2:23624392-23624411 None:intergenic 25.0%
!!! ATTTCAGAATTCTGAAATCT+TGG + chr2_2:23624561-23624580 None:intergenic 25.0%
TACTCGTAACATTGAAAAGA+TGG - chr2_2:23620254-23620273 Msa0244820:three_prime_UTR 30.0%
! TTCTGATGATGATAAACTTG+TGG - chr2_2:23620320-23620339 Msa0244820:three_prime_UTR 30.0%
!!! TAAGAGTTTTGGGAATTTGA+TGG - chr2_2:23620511-23620530 Msa0244820:CDS 30.0%
! ATTTTCCCACATGCTTAATT+TGG - chr2_2:23620663-23620682 Msa0244820:CDS 30.0%
ATTTGCCAAATTAAGCATGT+GGG + chr2_2:23620671-23620690 None:intergenic 30.0%
AATTTGCCAAATTAAGCATG+TGG + chr2_2:23620672-23620691 None:intergenic 30.0%
! CATGCTTAATTTGGCAAATT+TGG - chr2_2:23620672-23620691 Msa0244820:CDS 30.0%
AGGATTAAGTTACTGAAGAA+AGG - chr2_2:23620724-23620743 Msa0244820:CDS 30.0%
TTCAATATCTGACTCAGTTA+TGG + chr2_2:23620773-23620792 None:intergenic 30.0%
GACAATAAATGCTACAACAA+TGG + chr2_2:23620997-23621016 None:intergenic 30.0%
TTGTAGCATTTATTGTCTAC+AGG - chr2_2:23621000-23621019 Msa0244820:intron 30.0%
TAAACATTTGTGAGCCTATT+TGG - chr2_2:23621061-23621080 Msa0244820:intron 30.0%
AAACATTTGTGAGCCTATTT+GGG - chr2_2:23621062-23621081 Msa0244820:intron 30.0%
TTCTATAACTTCTCCCAAAT+AGG + chr2_2:23621078-23621097 None:intergenic 30.0%
! GATTGAGGATAATATTTTCC+TGG - chr2_2:23621480-23621499 Msa0244820:CDS 30.0%
TCTAACTACAACACTATACT+CGG + chr2_2:23621600-23621619 None:intergenic 30.0%
TGAATCTGTGTATGTACAAA+CGG + chr2_2:23621665-23621684 None:intergenic 30.0%
! TATTTTCGCAAGTATTCATG+TGG - chr2_2:23621970-23621989 Msa0244820:CDS 30.0%
AATATTTGCTTTGTCTGCTT+TGG - chr2_2:23622219-23622238 Msa0244820:CDS 30.0%
! TTGAACTCTAAAAAAGTCCA+CGG + chr2_2:23622410-23622429 None:intergenic 30.0%
AGTTCTCATTAGCTAATAAC+TGG + chr2_2:23622579-23622598 None:intergenic 30.0%
AATGATACCATTGCTTGTAT+TGG + chr2_2:23622662-23622681 None:intergenic 30.0%
! AGAAGAAATTTCCGATGTTT+TGG - chr2_2:23623020-23623039 Msa0244820:intron 30.0%
ATGGAAAGTTTCCAAAACAT+CGG + chr2_2:23623034-23623053 None:intergenic 30.0%
GATAATATAGCAAGATGAGT+AGG + chr2_2:23623450-23623469 None:intergenic 30.0%
GAAGTTATTGAACAATCGTT+TGG - chr2_2:23623519-23623538 Msa0244820:CDS 30.0%
! TGAAGCATTTGAAGATTCTT+CGG + chr2_2:23624004-23624023 None:intergenic 30.0%
TTCAGGATATGTACAATCAA+TGG - chr2_2:23624020-23624039 Msa0244820:CDS 30.0%
AGCAAATAGAATTTACCTTG+AGG + chr2_2:23624201-23624220 None:intergenic 30.0%
! TGAAGGACTAAAATTTTGTG+AGG - chr2_2:23624475-23624494 Msa0244820:CDS 30.0%
GCAATAGGTTAACTGAAATT+TGG + chr2_2:23624524-23624543 None:intergenic 30.0%
AGTTAACCTATTGCTAGAAA+TGG - chr2_2:23624530-23624549 Msa0244820:CDS 30.0%
TTGTGATATATGAGTCTCTA+AGG + chr2_2:23624680-23624699 None:intergenic 30.0%
ATATACTCCTTTGACAAATG+TGG + chr2_2:23624771-23624790 None:intergenic 30.0%
! ACATTTGTCAAAGGAGTATA+TGG - chr2_2:23624770-23624789 Msa0244820:CDS 30.0%
!!! TACCCTTATTTTGACAATGA+AGG - chr2_2:23624863-23624882 Msa0244820:intron 30.0%
!!! ACCCTTATTTTGACAATGAA+GGG - chr2_2:23624864-23624883 Msa0244820:intron 30.0%
ACCCTTCATTGTCAAAATAA+GGG + chr2_2:23624868-23624887 None:intergenic 30.0%
TACCCTTCATTGTCAAAATA+AGG + chr2_2:23624869-23624888 None:intergenic 30.0%
!! ATGATGCTTTGTTGTTGGAT+AGG - chr2_2:23620346-23620365 Msa0244820:three_prime_UTR 35.0%
GACATTCTTCAAGATTTGCA+TGG - chr2_2:23620375-23620394 Msa0244820:three_prime_UTR 35.0%
! TACTTGTGGCTAAGAGTTTT+GGG - chr2_2:23620501-23620520 Msa0244820:CDS 35.0%
! TTGGGAATTTGATGGTTGAT+AGG - chr2_2:23620519-23620538 Msa0244820:CDS 35.0%
! AAAGCATCAAATACTTCCAG+AGG + chr2_2:23620835-23620854 None:intergenic 35.0%
! GAAGAGTCAAACTGTTGATT+TGG - chr2_2:23620855-23620874 Msa0244820:intron 35.0%
TTATTGTCTACAGGCATGTT+TGG - chr2_2:23621009-23621028 Msa0244820:intron 35.0%
TCAAGTTCTTGCTTATCATC+TGG + chr2_2:23621352-23621371 None:intergenic 35.0%
TGATAAGCAAGAACTTGATG+AGG - chr2_2:23621354-23621373 Msa0244820:CDS 35.0%
!! GTCTCTAAAATCCAAAATCC+TGG + chr2_2:23621515-23621534 None:intergenic 35.0%
!! TAGCCTTATGTTGTATGCTT+AGG - chr2_2:23621564-23621583 Msa0244820:intron 35.0%
AAGCCTAAGCATACAACATA+AGG + chr2_2:23621570-23621589 None:intergenic 35.0%
TTTCACGAGACAATTTGGAA+AGG - chr2_2:23621761-23621780 Msa0244820:CDS 35.0%
TTCACGAGACAATTTGGAAA+GGG - chr2_2:23621762-23621781 Msa0244820:CDS 35.0%
!! GGATAACAGGAGCATTATAT+GGG + chr2_2:23621850-23621869 None:intergenic 35.0%
!! TGGATAACAGGAGCATTATA+TGG + chr2_2:23621851-23621870 None:intergenic 35.0%
CAAGAAGAGAATTGGATAAC+AGG + chr2_2:23621863-23621882 None:intergenic 35.0%
CTGTTATCCAATTCTCTTCT+TGG - chr2_2:23621861-23621880 Msa0244820:CDS 35.0%
TATCCAATTCTCTTCTTGGA+TGG - chr2_2:23621865-23621884 Msa0244820:CDS 35.0%
ATCCAATTCTCTTCTTGGAT+GGG - chr2_2:23621866-23621885 Msa0244820:CDS 35.0%
TGCACATTAGACGTATTGTA+AGG + chr2_2:23622015-23622034 None:intergenic 35.0%
ATACGTCTAATGTGCATTAC+AGG - chr2_2:23622019-23622038 Msa0244820:CDS 35.0%
TTTGTACTTCTCTCAGATAG+AGG - chr2_2:23622108-23622127 Msa0244820:CDS 35.0%
! ATGTTTTGCATCTCTCTTTG+AGG + chr2_2:23622306-23622325 None:intergenic 35.0%
! TGAACTCTAAAAAAGTCCAC+GGG + chr2_2:23622409-23622428 None:intergenic 35.0%
!! TTTTTGAAGGTTGTCTCTTC+AGG + chr2_2:23622610-23622629 None:intergenic 35.0%
AACCTTCAAAAATGTTGAGC+AGG - chr2_2:23622618-23622637 Msa0244820:CDS 35.0%
! TACCTGCTCAACATTTTTGA+AGG + chr2_2:23622623-23622642 None:intergenic 35.0%
ATTACAAAACACCTGGAGAT+TGG - chr2_2:23622901-23622920 Msa0244820:intron 35.0%
CGGAAATTTCTTCTGTCTTA+GGG + chr2_2:23623014-23623033 None:intergenic 35.0%
TCGGAAATTTCTTCTGTCTT+AGG + chr2_2:23623015-23623034 None:intergenic 35.0%
TGTTGCCATTGAGATGATAT+AGG + chr2_2:23623091-23623110 None:intergenic 35.0%
! CTTCTTGCTTTCCATTGATT+CGG + chr2_2:23623266-23623285 None:intergenic 35.0%
GGAAAGCAAGAAGTTATGAT+AGG - chr2_2:23623273-23623292 Msa0244820:CDS 35.0%
ATGATAGGATACTCAGATTC+AGG - chr2_2:23623288-23623307 Msa0244820:CDS 35.0%
ATTAACGTAGCAAAGGAGTT+TGG - chr2_2:23623369-23623388 Msa0244820:intron 35.0%
TATTGAACAATCGTTTGGAG+AGG - chr2_2:23623524-23623543 Msa0244820:CDS 35.0%
ATTCAACAAAACGAGGTTCT+TGG + chr2_2:23623698-23623717 None:intergenic 35.0%
ATTCGTCCATATTCTAACTC+TGG + chr2_2:23623827-23623846 None:intergenic 35.0%
GAATATGGACGAATGAACAT+TGG - chr2_2:23623833-23623852 Msa0244820:intron 35.0%
CAAGGTTTCATTTACCAGTT+TGG - chr2_2:23623936-23623955 Msa0244820:intron 35.0%
TTTCATTTACCAGTTTGGCT+TGG - chr2_2:23623941-23623960 Msa0244820:intron 35.0%
GAAGAATCTTCAAATGCTTC+AGG - chr2_2:23624003-23624022 Msa0244820:CDS 35.0%
ACAATCAATGGCCTTTCTTT+AGG - chr2_2:23624032-23624051 Msa0244820:CDS 35.0%
CAATCAATGGCCTTTCTTTA+GGG - chr2_2:23624033-23624052 Msa0244820:CDS 35.0%
TCAATGGTAACCCTAAAGAA+AGG + chr2_2:23624046-23624065 None:intergenic 35.0%
AACTAAGAGCTTGTCGTATA+AGG + chr2_2:23624113-23624132 None:intergenic 35.0%
TTTAACCTCTACATCCCAAA+TGG + chr2_2:23624234-23624253 None:intergenic 35.0%
CAACCTATTGAACCATGATT+GGG + chr2_2:23624367-23624386 None:intergenic 35.0%
TCAACCTATTGAACCATGAT+TGG + chr2_2:23624368-23624387 None:intergenic 35.0%
! AATGAGCTCTTTTTATCCCT+AGG - chr2_2:23624599-23624618 Msa0244820:CDS 35.0%
GTAGGCTTGTAAGACATTAA+GGG + chr2_2:23624703-23624722 None:intergenic 35.0%
TGTAGGCTTGTAAGACATTA+AGG + chr2_2:23624704-23624723 None:intergenic 35.0%
! ACGAATTTGCTTCAATGTGT+AGG + chr2_2:23624721-23624740 None:intergenic 35.0%
AAATTGCCAATCCAAATCTC+AGG + chr2_2:23624986-23625005 None:intergenic 35.0%
!! TGAGATTTGGATTGGCAATT+TGG - chr2_2:23624985-23625004 Msa0244820:CDS 35.0%
TGATGCTCAGTTGAGACTAT+TGG - chr2_2:23620284-23620303 Msa0244820:three_prime_UTR 40.0%
! GGAGTATGATGCTTTGTTGT+TGG - chr2_2:23620341-23620360 Msa0244820:three_prime_UTR 40.0%
! GTACTTGTGGCTAAGAGTTT+TGG - chr2_2:23620500-23620519 Msa0244820:CDS 40.0%
AGCTATCAGCAGAGTATGAA+GGG - chr2_2:23620557-23620576 Msa0244820:CDS 40.0%
CAGAGAAATTGGAGGAACTT+GGG - chr2_2:23620590-23620609 Msa0244820:CDS 40.0%
GAACTTGGGAATATGCTAAC+TGG - chr2_2:23620604-23620623 Msa0244820:CDS 40.0%
TGTTTGGATCGACGTATTTG+AGG - chr2_2:23621025-23621044 Msa0244820:intron 40.0%
TTAAGCATCTAGGTCCTGTT+TGG + chr2_2:23621210-23621229 None:intergenic 40.0%
TTGTCTTCATGTGCAGGATA+AGG - chr2_2:23621290-23621309 Msa0244820:CDS 40.0%
TGATGAGGCTTTACAAAGAG+AGG - chr2_2:23621369-23621388 Msa0244820:CDS 40.0%
!! AGATGACTCTCTGAGTTGAT+TGG - chr2_2:23621426-23621445 Msa0244820:CDS 40.0%
! TTTTCCTGGAAAAACTTGCC+AGG - chr2_2:23621494-23621513 Msa0244820:CDS 40.0%
! AAATCCTGGCAAGTTTTTCC+AGG + chr2_2:23621501-23621520 None:intergenic 40.0%
! GGAAAAACTTGCCAGGATTT+TGG - chr2_2:23621501-23621520 Msa0244820:CDS 40.0%
! TTCGCACTGATGAAATTCGA+AGG - chr2_2:23621693-23621712 Msa0244820:CDS 40.0%
CTCATTTCATCTTGTGGTGT+AGG + chr2_2:23621725-23621744 None:intergenic 40.0%
! GCTACTTTCACGAGACAATT+TGG - chr2_2:23621756-23621775 Msa0244820:CDS 40.0%
TCACGAGACAATTTGGAAAG+GGG - chr2_2:23621763-23621782 Msa0244820:CDS 40.0%
ACACATCCCTTGTAACTTCA+GGG + chr2_2:23622060-23622079 None:intergenic 40.0%
TTCGAGGTAATTGAATGTGC+TGG - chr2_2:23622139-23622158 Msa0244820:CDS 40.0%
! TGCTTTGGTAGTTGTCTATG+TGG - chr2_2:23622234-23622253 Msa0244820:CDS 40.0%
! CATCTCTCTTTGAGGATTCA+TGG + chr2_2:23622298-23622317 None:intergenic 40.0%
ATGACACGATAAGGTTCGTT+TGG + chr2_2:23622508-23622527 None:intergenic 40.0%
! GAACCTTATCGTGTCATTCT+TGG - chr2_2:23622511-23622530 Msa0244820:CDS 40.0%
CAACAGTCCAATACAAGCAA+TGG - chr2_2:23622652-23622671 Msa0244820:intron 40.0%
AAGAGGCTCCAAAAACTACA+AGG + chr2_2:23622725-23622744 None:intergenic 40.0%
AGCTTCCATCTGCTATTGAT+CGG + chr2_2:23622783-23622802 None:intergenic 40.0%
TTGCGGCAAGTTTCTACATT+TGG - chr2_2:23622814-23622833 Msa0244820:CDS 40.0%
CATTTGGACTTTCACTCGTA+AGG - chr2_2:23622830-23622849 Msa0244820:CDS 40.0%
AGATTGGATCTTACCGAGAA+TGG - chr2_2:23622917-23622936 Msa0244820:intron 40.0%
! TGGCTTTTATCTGAGCTTAG+TGG - chr2_2:23622961-23622980 Msa0244820:intron 40.0%
!! AGGGAAGTTCTGAAATGACA+TGG + chr2_2:23623053-23623072 None:intergenic 40.0%
TGGTGCCTATATCATCTCAA+TGG - chr2_2:23623083-23623102 Msa0244820:CDS 40.0%
! CAGCAAGCTTTTCAAACAGT+GGG + chr2_2:23623185-23623204 None:intergenic 40.0%
! TCAGCAAGCTTTTCAAACAG+TGG + chr2_2:23623186-23623205 None:intergenic 40.0%
! CGCGACTTTTCTCTATAGAT+TGG - chr2_2:23623232-23623251 Msa0244820:CDS 40.0%
TGGTACAGAAACCGAATCAA+TGG - chr2_2:23623252-23623271 Msa0244820:CDS 40.0%
TCAGATTCAGGAAAAGATGC+AGG - chr2_2:23623300-23623319 Msa0244820:CDS 40.0%
GGAACTCATTAACGTAGCAA+AGG - chr2_2:23623362-23623381 Msa0244820:intron 40.0%
GTTAAGCTGACAATGTTCCA+CGG - chr2_2:23623393-23623412 Msa0244820:intron 40.0%
TGCTATATTATCACAGCCAC+CGG - chr2_2:23623458-23623477 Msa0244820:intron 40.0%
ATACTATTCACGGCTCACTT+CGG - chr2_2:23623481-23623500 Msa0244820:CDS 40.0%
!! GCTGAAGTGTTCTAAAGCAT+AGG + chr2_2:23623554-23623573 None:intergenic 40.0%
!! CGGAAGTATTCAACAAAACG+AGG + chr2_2:23623705-23623724 None:intergenic 40.0%
GCAACACCAGAGTTAGAATA+TGG - chr2_2:23623818-23623837 Msa0244820:intron 40.0%
CGAAAATCCAAGGAATAGCT+CGG + chr2_2:23623904-23623923 None:intergenic 40.0%
! CTATTCCTTGGATTTTCGCT+TGG - chr2_2:23623906-23623925 Msa0244820:intron 40.0%
! TTTTCGCTTGGACACAAACA+AGG - chr2_2:23623918-23623937 Msa0244820:intron 40.0%
!!! TTACCAGTTTGGCTTGGTTT+TGG - chr2_2:23623947-23623966 Msa0244820:intron 40.0%
!! CTTTAGGGTTACCATTGACT+TGG - chr2_2:23624048-23624067 Msa0244820:intron 40.0%
!! TACCATTGACTTGGTTGAGA+TGG - chr2_2:23624057-23624076 Msa0244820:intron 40.0%
AACCATCTCAACCAAGTCAA+TGG + chr2_2:23624062-23624081 None:intergenic 40.0%
!! TTGCTTTGAAACCTGCCATT+TGG - chr2_2:23624216-23624235 Msa0244820:intron 40.0%
!! TGCTTTGAAACCTGCCATTT+GGG - chr2_2:23624217-23624236 Msa0244820:intron 40.0%
! CATGGTTCAATAGGTTGAAC+CGG - chr2_2:23624370-23624389 Msa0244820:intron 40.0%
ACCTATTGCTAGAAATGGAG+TGG - chr2_2:23624535-23624554 Msa0244820:CDS 40.0%
! TCTTTTTATCCCTAGGTTGC+TGG - chr2_2:23624606-23624625 Msa0244820:CDS 40.0%
GGTCACAAGGATATTCTTGA+AGG - chr2_2:23624627-23624646 Msa0244820:CDS 40.0%
GAGACCCTTACTTAAAGCAA+CGG - chr2_2:23624649-23624668 Msa0244820:CDS 40.0%
! GTAGCCGTTGCTTTAAGTAA+GGG + chr2_2:23624656-23624675 None:intergenic 40.0%
CTCATCTTCACATGGTAATC+TGG + chr2_2:23624747-23624766 None:intergenic 40.0%
CAGATTACCATGTGAAGATG+AGG - chr2_2:23624745-23624764 Msa0244820:CDS 40.0%
AGTTTAACAAGTTCTGCTGC+TGG + chr2_2:23624807-23624826 None:intergenic 40.0%
TATTATGCCTGCCTGAGATT+TGG - chr2_2:23624972-23624991 Msa0244820:CDS 40.0%
GAGCTATCAGCAGAGTATGA+AGG - chr2_2:23620556-23620575 Msa0244820:CDS 45.0%
GCTATCAGCAGAGTATGAAG+GGG - chr2_2:23620558-23620577 Msa0244820:CDS 45.0%
CCAAGTTCCTCCAATTTCTC+TGG + chr2_2:23620592-23620611 None:intergenic 45.0%
CCAGAGAAATTGGAGGAACT+TGG - chr2_2:23620589-23620608 Msa0244820:CDS 45.0%
!! ATGCTAACTGGTCTTGATGC+TGG - chr2_2:23620616-23620635 Msa0244820:CDS 45.0%
TGAACTCAAGAAGACTCCTC+TGG - chr2_2:23620816-23620835 Msa0244820:intron 45.0%
ACTGAGTAGGATGAGCAGTT+AGG + chr2_2:23620882-23620901 None:intergenic 45.0%
CGATCTTTGCTGCAAAAGCA+TGG - chr2_2:23620910-23620929 Msa0244820:intron 45.0%
! CTTTGCTGCAAAAGCATGGA+AGG - chr2_2:23620914-23620933 Msa0244820:intron 45.0%
GAATCGTTGTCTTCATGTGC+AGG - chr2_2:23621284-23621303 Msa0244820:CDS 45.0%
CCTGCTCTCATTTCATCTTG+TGG + chr2_2:23621731-23621750 None:intergenic 45.0%
CCACAAGATGAAATGAGAGC+AGG - chr2_2:23621728-23621747 Msa0244820:CDS 45.0%
! GGGTACCAAAGTTTTTGCGT+CGG - chr2_2:23621783-23621802 Msa0244820:CDS 45.0%
! GGTACCAAAGTTTTTGCGTC+GGG - chr2_2:23621784-23621803 Msa0244820:CDS 45.0%
TCAACCCGACGCAAAAACTT+TGG + chr2_2:23621791-23621810 None:intergenic 45.0%
!! GACACAGCTCTGAAGAACAT+TGG - chr2_2:23621809-23621828 Msa0244820:CDS 45.0%
CTCCCATCCAAGAAGAGAAT+TGG + chr2_2:23621871-23621890 None:intergenic 45.0%
CAATTCTCTTCTTGGATGGG+AGG - chr2_2:23621869-23621888 Msa0244820:CDS 45.0%
TGTGCATTACAGGCAATCCT+AGG - chr2_2:23622029-23622048 Msa0244820:CDS 45.0%
GTGCATTACAGGCAATCCTA+GGG - chr2_2:23622030-23622049 Msa0244820:CDS 45.0%
CACATCCCTTGTAACTTCAG+GGG + chr2_2:23622059-23622078 None:intergenic 45.0%
CACACATCCCTTGTAACTTC+AGG + chr2_2:23622061-23622080 None:intergenic 45.0%
GTGTCTACTAGCTCGAATGA+TGG - chr2_2:23622078-23622097 Msa0244820:CDS 45.0%
GATAGAGGATCTCATGTTCG+AGG - chr2_2:23622123-23622142 Msa0244820:CDS 45.0%
CAATGACGAGCTTCGTGTTA+GGG - chr2_2:23622262-23622281 Msa0244820:CDS 45.0%
TACTGTACTATCTGTACCCG+TGG - chr2_2:23622390-23622409 Msa0244820:CDS 45.0%
ACACGATAAGGTTCGTTTGG+AGG + chr2_2:23622505-23622524 None:intergenic 45.0%
CCTCCAAGAATGACACGATA+AGG + chr2_2:23622517-23622536 None:intergenic 45.0%
! CCTTATCGTGTCATTCTTGG+AGG - chr2_2:23622514-23622533 Msa0244820:CDS 45.0%
! TGTCATTCTTGGAGGTGTGA+GGG - chr2_2:23622522-23622541 Msa0244820:CDS 45.0%
GCTTGTATTGGACTGTTGTG+AGG + chr2_2:23622650-23622669 None:intergenic 45.0%
AGCCTCTTGAACTGTGTTAC+AGG - chr2_2:23622737-23622756 Msa0244820:CDS 45.0%
GACCTGTAACACAGTTCAAG+AGG + chr2_2:23622742-23622761 None:intergenic 45.0%
! GAAGCTTGCTCGATTTCTTG+CGG - chr2_2:23622797-23622816 Msa0244820:CDS 45.0%
GGACGCAATTACAAAACACC+TGG - chr2_2:23622894-23622913 Msa0244820:intron 45.0%
ATCTTACCGAGAATGGTCAG+AGG - chr2_2:23622924-23622943 Msa0244820:intron 45.0%
CTTCTGTCTTAGGGAGATCA+TGG + chr2_2:23623005-23623024 None:intergenic 45.0%
TCAACAGCAAGCACATCAGA+CGG + chr2_2:23623117-23623136 None:intergenic 45.0%
AACAGTGGGACAACTCTCAA+CGG + chr2_2:23623171-23623190 None:intergenic 45.0%
AGTGAGCCGTGAATAGTATC+CGG + chr2_2:23623480-23623499 None:intergenic 45.0%
TACTATTCACGGCTCACTTC+GGG - chr2_2:23623482-23623501 Msa0244820:CDS 45.0%
TCACTTCGGGTAACAGTTCA+AGG - chr2_2:23623495-23623514 Msa0244820:CDS 45.0%
GACAGCCATCTCATCCAAAA+GGG + chr2_2:23623643-23623662 None:intergenic 45.0%
TGACAGCCATCTCATCCAAA+AGG + chr2_2:23623644-23623663 None:intergenic 45.0%
GATGGCTGTCATTGCAACAA+AGG - chr2_2:23623653-23623672 Msa0244820:CDS 45.0%
!! CCACTTGGCTTTCGTTTTGA+TGG + chr2_2:23623866-23623885 None:intergenic 45.0%
CCATCAAAACGAAAGCCAAG+TGG - chr2_2:23623863-23623882 Msa0244820:intron 45.0%
TCAAAACGAAAGCCAAGTGG+AGG - chr2_2:23623866-23623885 Msa0244820:intron 45.0%
AGCGATTCAATTCCTCCACT+TGG + chr2_2:23623881-23623900 None:intergenic 45.0%
TGTGTCCAAGCGAAAATCCA+AGG + chr2_2:23623914-23623933 None:intergenic 45.0%
TCTCCAAAACCAAGCCAAAC+TGG + chr2_2:23623953-23623972 None:intergenic 45.0%
! GTTGAGATGGTTTTCGCCAA+GGG - chr2_2:23624070-23624089 Msa0244820:intron 45.0%
TCGTATAAGGAAGCAATCCC+GGG + chr2_2:23624100-23624119 None:intergenic 45.0%
GTCGTATAAGGAAGCAATCC+CGG + chr2_2:23624101-23624120 None:intergenic 45.0%
ACACAAGAGCTGTGTCCATT+TGG - chr2_2:23624133-23624152 Msa0244820:intron 45.0%
AACCAAGAGCTTTCTCCTCA+AGG - chr2_2:23624183-23624202 Msa0244820:intron 45.0%
TACCTTGAGGAGAAAGCTCT+TGG + chr2_2:23624188-23624207 None:intergenic 45.0%
! GGTCTCACTAGTTTGATCTC+CGG + chr2_2:23624343-23624362 None:intergenic 45.0%
CCTATTGAACCATGATTGGG+AGG + chr2_2:23624364-23624383 None:intergenic 45.0%
CCTCCCAATCATGGTTCAAT+AGG - chr2_2:23624361-23624380 Msa0244820:intron 45.0%
CAGTTCAACCTAGTTCGATC+AGG - chr2_2:23624430-23624449 Msa0244820:intron 45.0%
AGGTTGAACCTGATCGAACT+AGG + chr2_2:23624441-23624460 None:intergenic 45.0%
!! GCCACTCCATTTCTAGCAAT+AGG + chr2_2:23624539-23624558 None:intergenic 45.0%
! CGTAGCCGTTGCTTTAAGTA+AGG + chr2_2:23624657-23624676 None:intergenic 45.0%
AATGTGGCCTCATCTTCACA+TGG + chr2_2:23624755-23624774 None:intergenic 45.0%
GATGAGGCCACATTTGTCAA+AGG - chr2_2:23624761-23624780 Msa0244820:CDS 45.0%
!! CCAGGAGCATACTCACTTTT+TGG + chr2_2:23624834-23624853 None:intergenic 45.0%
CCAAAAAGTGAGTATGCTCC+TGG - chr2_2:23624831-23624850 Msa0244820:intron 45.0%
!! ATAAGGGTATCCTCAAGACC+AGG + chr2_2:23624852-23624871 None:intergenic 45.0%
! ACAATGAAGGGTATAGCTGC+TGG - chr2_2:23624876-23624895 Msa0244820:intron 45.0%
!! AAAATTATTAACTAATATAA+TGG + chr2_2:23620945-23620964 None:intergenic 5.0%
!! ATATTATATAATAAAGAATT+TGG - chr2_2:23625028-23625047 Msa0244820:CDS 5.0%
! CAGAGTATGAAGGGGAGCAT+AGG - chr2_2:23620566-23620585 Msa0244820:CDS 50.0%
GGAGCATAGGCCAGAGAAAT+TGG - chr2_2:23620579-23620598 Msa0244820:CDS 50.0%
GCATAGGCCAGAGAAATTGG+AGG - chr2_2:23620582-23620601 Msa0244820:CDS 50.0%
GATCGACGAATCGACTGAGT+AGG + chr2_2:23620895-23620914 None:intergenic 50.0%
GGTGACCCCTGAAGTTACAA+GGG - chr2_2:23622051-23622070 Msa0244820:CDS 50.0%
GCAATGACGAGCTTCGTGTT+AGG - chr2_2:23622261-23622280 Msa0244820:CDS 50.0%
! GTGTCATTCTTGGAGGTGTG+AGG - chr2_2:23622521-23622540 Msa0244820:CDS 50.0%
TACAGGTCACTCTGTGCATG+TGG - chr2_2:23622754-23622773 Msa0244820:CDS 50.0%
GGTGACCGATCAATAGCAGA+TGG - chr2_2:23622775-23622794 Msa0244820:CDS 50.0%
ACATCCGTCAAGAGTCAGAG+AGG - chr2_2:23622857-23622876 Msa0244820:CDS 50.0%
TGTGCCTCTCTGACTCTTGA+CGG + chr2_2:23622864-23622883 None:intergenic 50.0%
! AGAGAGGCACACAGACGTTA+TGG - chr2_2:23622873-23622892 Msa0244820:intron 50.0%
CTCGGTAAGATCCAATCTCC+AGG + chr2_2:23622915-23622934 None:intergenic 50.0%
TGCGTTCCTCTGACCATTCT+CGG + chr2_2:23622933-23622952 None:intergenic 50.0%
!! AGTGGAAAGCGTCCTCTCTT+CGG - chr2_2:23622979-23622998 Msa0244820:intron 50.0%
GAACTTCCCTCAGACAGCTT+TGG - chr2_2:23623063-23623082 Msa0244820:CDS 50.0%
TAGGCACCAAAGCTGTCTGA+GGG + chr2_2:23623072-23623091 None:intergenic 50.0%
ATAGGCACCAAAGCTGTCTG+AGG + chr2_2:23623073-23623092 None:intergenic 50.0%
AACAGCAAGCACATCAGACG+GGG + chr2_2:23623115-23623134 None:intergenic 50.0%
CAACAGCAAGCACATCAGAC+GGG + chr2_2:23623116-23623135 None:intergenic 50.0%
! AGGTCGTCTATCTGCTGCTT+GGG - chr2_2:23623320-23623339 Msa0244820:intron 50.0%
! TGCTGCTTGGGCACTATACA+AGG - chr2_2:23623332-23623351 Msa0244820:intron 50.0%
GGCACTATACAAGGCTCAAG+AGG - chr2_2:23623341-23623360 Msa0244820:intron 50.0%
CAGCCACCGGATACTATTCA+CGG - chr2_2:23623471-23623490 Msa0244820:CDS 50.0%
TCCTCCTGTGTCTCCAAAAC+CGG - chr2_2:23623608-23623627 Msa0244820:CDS 50.0%
!!! CATTCCGGTTTTGGAGACAC+AGG + chr2_2:23623615-23623634 None:intergenic 50.0%
CTGTGTCTCCAAAACCGGAA+TGG - chr2_2:23623613-23623632 Msa0244820:CDS 50.0%
AATCGCTCCGAGCTATTCCT+TGG - chr2_2:23623894-23623913 Msa0244820:intron 50.0%
! GGTTGAGATGGTTTTCGCCA+AGG - chr2_2:23624069-23624088 Msa0244820:intron 50.0%
CGTATAAGGAAGCAATCCCG+GGG + chr2_2:23624099-23624118 None:intergenic 50.0%
GATCTCAGACGCTCACCAAA+TGG + chr2_2:23624151-23624170 None:intergenic 50.0%
! ACCTGCCATTTGGGATGTAG+AGG - chr2_2:23624226-23624245 Msa0244820:intron 50.0%
ACCTCTACATCCCAAATGGC+AGG + chr2_2:23624230-23624249 None:intergenic 50.0%
CTAGTGAGACCTCCCAATCA+TGG - chr2_2:23624352-23624371 Msa0244820:intron 50.0%
TCCTTGTGACCAGCAACCTA+GGG + chr2_2:23624618-23624637 None:intergenic 50.0%
ATCCTTGTGACCAGCAACCT+AGG + chr2_2:23624619-23624638 None:intergenic 50.0%
!! TGAGTATGCTCCTGGTCTTG+AGG - chr2_2:23624839-23624858 Msa0244820:intron 50.0%
TGCCTGCCTGAGATTTGGAT+TGG - chr2_2:23624977-23624996 Msa0244820:CDS 50.0%
TGCCAATCCAAATCTCAGGC+AGG + chr2_2:23624982-23625001 None:intergenic 50.0%
TGGATGGGAGGAGATCGTGA+TGG - chr2_2:23621881-23621900 Msa0244820:CDS 55.0%
GTAACTTCAGGGGTCACCCT+AGG + chr2_2:23622049-23622068 None:intergenic 55.0%
GGGTGACCCCTGAAGTTACA+AGG - chr2_2:23622050-23622069 Msa0244820:CDS 55.0%
GAGAATGGTCAGAGGAACGC+AGG - chr2_2:23622932-23622951 Msa0244820:intron 55.0%
CTCTCAACGGCTGTTTGACG+TGG + chr2_2:23623158-23623177 None:intergenic 55.0%
AAAAGTCGCGCTACAGCAGC+AGG + chr2_2:23623222-23623241 None:intergenic 55.0%
CAGGTCGTCTATCTGCTGCT+TGG - chr2_2:23623319-23623338 Msa0244820:intron 55.0%
CTCTTCCAACTGTCCCACCT+CGG + chr2_2:23623419-23623438 None:intergenic 55.0%
GAGCCGTGAATAGTATCCGG+TGG + chr2_2:23623477-23623496 None:intergenic 55.0%
ACTGCTGCTACACTCGAGCA+CGG - chr2_2:23623579-23623598 Msa0244820:CDS 55.0%
!!! TCCGGTTTTGGAGACACAGG+AGG + chr2_2:23623612-23623631 None:intergenic 55.0%
! TCCAAAAGGGCACGCCATTC+CGG + chr2_2:23623630-23623649 None:intergenic 55.0%
! GCGTGCCCTTTTGGATGAGA+TGG - chr2_2:23623635-23623654 Msa0244820:CDS 55.0%
TCCCTAGGTTGCTGGTCACA+AGG - chr2_2:23624614-23624633 Msa0244820:CDS 55.0%
GCTGCTGGCATGCAAAACAC+TGG - chr2_2:23624891-23624910 Msa0244820:CDS 55.0%
ATGGTCAGAGGAACGCAGGC+AGG - chr2_2:23622936-23622955 Msa0244820:intron 60.0%
CAGAGGAACGCAGGCAGGAA+TGG - chr2_2:23622941-23622960 Msa0244820:intron 60.0%
GGGAGATCATGGCCGAAGAG+AGG + chr2_2:23622994-23623013 None:intergenic 60.0%
CTGACAATGTTCCACGGCCG+AGG - chr2_2:23623399-23623418 Msa0244820:intron 60.0%
ACAATGTTCCACGGCCGAGG+TGG - chr2_2:23623402-23623421 Msa0244820:intron 60.0%
CAATGTTCCACGGCCGAGGT+GGG - chr2_2:23623403-23623422 Msa0244820:intron 60.0%
CGAGGTGGGACAGTTGGAAG+AGG - chr2_2:23623417-23623436 Msa0244820:intron 60.0%
GGTGGGACAGTTGGAAGAGG+AGG - chr2_2:23623420-23623439 Msa0244820:intron 60.0%
GGGACAGTTGGAAGAGGAGG+TGG - chr2_2:23623423-23623442 Msa0244820:intron 60.0%
! AGGGCACGCCATTCCGGTTT+TGG + chr2_2:23623624-23623643 None:intergenic 60.0%
! ACCGGAATGGCGTGCCCTTT+TGG - chr2_2:23623626-23623645 Msa0244820:CDS 60.0%
! GTTTTCGCCAAGGGAGACCC+CGG - chr2_2:23624079-23624098 Msa0244820:intron 60.0%
! TTTTCGCCAAGGGAGACCCC+GGG - chr2_2:23624080-23624099 Msa0244820:intron 60.0%
AGCAATCCCGGGGTCTCCCT+TGG + chr2_2:23624089-23624108 None:intergenic 65.0%
CAACTGTCCCACCTCGGCCG+TGG + chr2_2:23623413-23623432 None:intergenic 70.0%
CACGGCCGAGGTGGGACAGT+TGG - chr2_2:23623411-23623430 Msa0244820:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 23620249 23625122 23620249 ID=Msa0244820;Name=Msa0244820
chr2_2 mRNA 23620249 23625122 23620249 ID=Msa0244820-mRNA-1;Parent=Msa0244820;Name=Msa0244820-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.88|0.9|1|1|1|10|205|988
chr2_2 exon 23620249 23620750 23620249 ID=Msa0244820-mRNA-1:exon:9078;Parent=Msa0244820-mRNA-1
chr2_2 exon 23621167 23621553 23621167 ID=Msa0244820-mRNA-1:exon:9077;Parent=Msa0244820-mRNA-1
chr2_2 exon 23621643 23622641 23621643 ID=Msa0244820-mRNA-1:exon:9076;Parent=Msa0244820-mRNA-1
chr2_2 exon 23622732 23622886 23622732 ID=Msa0244820-mRNA-1:exon:9075;Parent=Msa0244820-mRNA-1
chr2_2 exon 23623039 23623126 23623039 ID=Msa0244820-mRNA-1:exon:9074;Parent=Msa0244820-mRNA-1
chr2_2 exon 23623227 23623330 23623227 ID=Msa0244820-mRNA-1:exon:9073;Parent=Msa0244820-mRNA-1
chr2_2 exon 23623469 23623691 23623469 ID=Msa0244820-mRNA-1:exon:9072;Parent=Msa0244820-mRNA-1
chr2_2 exon 23623981 23624065 23623981 ID=Msa0244820-mRNA-1:exon:9071;Parent=Msa0244820-mRNA-1
chr2_2 exon 23624436 23624830 23624436 ID=Msa0244820-mRNA-1:exon:9070;Parent=Msa0244820-mRNA-1
chr2_2 exon 23624889 23625122 23624889 ID=Msa0244820-mRNA-1:exon:9069;Parent=Msa0244820-mRNA-1
chr2_2 CDS 23624889 23625122 23624889 ID=Msa0244820-mRNA-1:cds;Parent=Msa0244820-mRNA-1
chr2_2 CDS 23624436 23624830 23624436 ID=Msa0244820-mRNA-1:cds;Parent=Msa0244820-mRNA-1
chr2_2 CDS 23623981 23624065 23623981 ID=Msa0244820-mRNA-1:cds;Parent=Msa0244820-mRNA-1
chr2_2 CDS 23623469 23623691 23623469 ID=Msa0244820-mRNA-1:cds;Parent=Msa0244820-mRNA-1
chr2_2 CDS 23623227 23623330 23623227 ID=Msa0244820-mRNA-1:cds;Parent=Msa0244820-mRNA-1
chr2_2 CDS 23623039 23623126 23623039 ID=Msa0244820-mRNA-1:cds;Parent=Msa0244820-mRNA-1
chr2_2 CDS 23622732 23622886 23622732 ID=Msa0244820-mRNA-1:cds;Parent=Msa0244820-mRNA-1
chr2_2 CDS 23621643 23622641 23621643 ID=Msa0244820-mRNA-1:cds;Parent=Msa0244820-mRNA-1
chr2_2 CDS 23621167 23621553 23621167 ID=Msa0244820-mRNA-1:cds;Parent=Msa0244820-mRNA-1
chr2_2 CDS 23620454 23620750 23620454 ID=Msa0244820-mRNA-1:cds;Parent=Msa0244820-mRNA-1
chr2_2 three_prime_UTR 23620249 23620453 23620249 ID=Msa0244820-mRNA-1:three_prime_utr;Parent=Msa0244820-mRNA-1
Gene Sequence

>Msa0244820

ATGGCTACTCGTAACATTGAAAAGATGGCTTCAATTGATGCTCAGTTGAGACTATTGGCACCAAAAAAAGTTTCTGATGATGATAAACTTGTGGAGTATGATGCTTTGTTGTTGGATAGGTTTCTTGACATTCTTCAAGATTTGCATGGAGAAGATATCAGACAAACTGATATTTTCTTCAATTCCTTTCTTATCTTTTTGTTATGTTTAATATCAAAATTGGCCTTGAAAATAGTTCAAGATTGTTATGAGCTATCAGCAGAGTATGAAGGGGAGCATAGGCCAGAGAAATTGGAGGAACTTGGGAATATGCTAACTGGTCTTGATGCTGGAGATTCTATTGTTATAGCTAAATCATTTTCCCACATGCTTAATTTGGCAAATTTGGCTGAAGAAGTTCAAATTGCATATAGAAGAAGGATTAAGTTACTGAAGAAAGGTGATTTTGCTGATGAAAATTCTGCCATAACTGAGTCAGATATTGAAGAGACATTCAAGAAGCTTGTGACTGAACTCAAGAAGACTCCTCTGGAAGTATTTGATGCTTTGAAGAGTCAAACTGTTGATTTGGTCCTAACTGCTCATCCTACTCAGTCGATTCGTCGATCTTTGCTGCAAAAGCATGGAAGGATAAGGAATAACTTAACACAGTTGTATGCTAAAGACATAACACCAGATGATAAGCAAGAACTTGATGAGGCTTTACAAAGAGAGATTCAAGCTGCATTTCGCACTGATGAAATTCGAAGGACTGCTCCTACACCACAAGATGAAATGAGAGCAGGAATGAGCTACTTTCACGAGACAATTTGGAAAGGGGTACCAAAGTTTTTGCGTCGGGTTGACACAGCTCTGAAGAACATTGGAGTAAATGAACGTGTCCCATATAATGCTCCTGTTATCCAATTCTCTTCTTGGATGGGAGGAGATCGTGATGGCAATCCTAGGGTGACCCCTGAAGTTACAAGGGATGTGTGTCTACTAGCTCGAATGATGGCTGCTAATTTGTACTTCTCTCAGATAGAGGATCTCATGTTCGAGTTGTCTATGTGGCGCTGCAATGACGAGCTTCGTGTTAGGGCTGAAGAGCTCCATGAATCCTCAAAGAGAGATGCAAAACATTATATCGAATTTTGGAAACAAATTCCTCCAAACGAACCTTATCGTGTCATTCTTGGAGGTGTGAGGGACAAACTGTATAATACTCGTGAACGTGCTCGCCAGTTATTAGCTAATGAGAACTCTGACATTCCTGAAGAGACAACCTTCAAAAATGTTGAGCAGTTTTTGGAGCCTCTTGAACTGTGTTACAGGTCACTCTGTGCATGTGGTGACCGATCAATAGCAGATGGAAGCTTGCTCGATTTCTTGCGGCAAGTTTCTACATTTGGACTTTCACTCGTAAGGCTCGACATCCGTCAAGAGTCAGAGAGGCACACAGACGTTATGGACGCAATTACAAAACACCTGGAGATTGGATCTTACCGAGAATGGTCAGAGGAACGCAGGCAGGAATGGCTTTTATCTGAGCTTAGTGGAAAGCGTCCTCTCTTCGGCCATGATCTCCCTAAGACAGAAGAAATTTCCGATGTTTTGGAAACTTTCCATGTCATTTCAGAACTTCCCTCAGACAGCTTTGGTGCCTATATCATCTCAATGGCAACATCCCCGTCTGATGTGCTTGCTGTTGAGCTTTTACAACGTGAATGCCACGTCAAACAGCCGTTGAGAGTTGTCCCACTGTTTGAAAAGCTTGCTGATCTTGAGTCTGCTCCTGCTGCTGTAGCGCGACTTTTCTCTATAGATTGGTACAGAAACCGAATCAATGGAAAGCAAGAAGTTATGATAGGATACTCAGATTCAGGAAAAGATGCAGGTCGTCTATCTGCTGCTTGGGCACTATACAAGGCTCAAGAGGAACTCATTAACGTAGCAAAGGAGTTTGGCGTTAAGCTGACAATGTTCCACGGCCGAGGTGGGACAGTTGGAAGAGGAGGTGGTCCTACTCATCTTGCTATATTATCACAGCCACCGGATACTATTCACGGCTCACTTCGGGTAACAGTTCAAGGTGAAGTTATTGAACAATCGTTTGGAGAGGAGCACCTATGCTTTAGAACACTTCAGCGTTTCACTGCTGCTACACTCGAGCACGGAATGCATCCTCCTGTGTCTCCAAAACCGGAATGGCGTGCCCTTTTGGATGAGATGGCTGTCATTGCAACAAAGGAATATCGCTCAATTGTTTTCCAAGAACCTCGTTTTGTTGAATACTTCCGATGTGCAACACCAGAGTTAGAATATGGACGAATGAACATTGGCAGTCGTCCATCAAAACGAAAGCCAAGTGGAGGAATTGAATCGCTCCGAGCTATTCCTTGGATTTTCGCTTGGACACAAACAAGGTTTCATTTACCAGTTTGGCTTGGTTTTGGAGAAGCATTCAAGCATGCAATTGAGAAAGATCCGAAGAATCTTCAAATGCTTCAGGATATGTACAATCAATGGCCTTTCTTTAGGGTTACCATTGACTTGGTTGAGATGGTTTTCGCCAAGGGAGACCCCGGGATTGCTTCCTTATACGACAAGCTCTTAGTTACACAAGAGCTGTGTCCATTTGGTGAGCGTCTGAGATCTAAATATGAAGAAACCAAGAGCTTTCTCCTCAAGGTTGCTGGTCACAAGGATATTCTTGAAGGAGACCCTTACTTAAAGCAACGGCTACGCCTTAGAGACTCATATATCACAACCCTTAATGTCTTACAAGCCTACACATTGAAGCAAATTCGTGATCCAGATTACCATGTGAAGATGAGGCCACATTTGTCAAAGGAGTATATGGAATCAAGCAAGCCAGCAGCAGAACTTGTTAAACTTAATCCAAAAAGTGAGTATGCTCCTGGTCTTGAGGATACCCTTATTTTGACAATGAAGGGTATAGCTGCTGGCATGCAAAACACTGGTTGA

Protein sequence

>Msa0244820

MATRNIEKMASIDAQLRLLAPKKVSDDDKLVEYDALLLDRFLDILQDLHGEDIRQTDIFFNSFLIFLLCLISKLALKIVQDCYELSAEYEGEHRPEKLEELGNMLTGLDAGDSIVIAKSFSHMLNLANLAEEVQIAYRRRIKLLKKGDFADENSAITESDIEETFKKLVTELKKTPLEVFDALKSQTVDLVLTAHPTQSIRRSLLQKHGRIRNNLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTAPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGVNERVPYNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRVRAEELHESSKRDAKHYIEFWKQIPPNEPYRVILGGVRDKLYNTRERARQLLANENSDIPEETTFKNVEQFLEPLELCYRSLCACGDRSIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVMDAITKHLEIGSYREWSEERRQEWLLSELSGKRPLFGHDLPKTEEISDVLETFHVISELPSDSFGAYIISMATSPSDVLAVELLQRECHVKQPLRVVPLFEKLADLESAPAAVARLFSIDWYRNRINGKQEVMIGYSDSGKDAGRLSAAWALYKAQEELINVAKEFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPEWRALLDEMAVIATKEYRSIVFQEPRFVEYFRCATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGEAFKHAIEKDPKNLQMLQDMYNQWPFFRVTIDLVEMVFAKGDPGIASLYDKLLVTQELCPFGERLRSKYEETKSFLLKVAGHKDILEGDPYLKQRLRLRDSYITTLNVLQAYTLKQIRDPDYHVKMRPHLSKEYMESSKPAAELVKLNPKSEYAPGLEDTLILTMKGIAAGMQNTG*