Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1192140 | sp|Q9M9S3|WHY1_ARATH | 60.360 | 222 | 77 | 2 | 49 | 264 | 47 | 263 | 1.99e-95 | 284 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1192140 | A0A072TSF9 | 87.546 | 273 | 18 | 4 | 2 | 264 | 1 | 267 | 2.49e-135 | 392 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1192140 | TF | Whirly |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095770 | Msa1192140 | -0.800974 | 1.120225e-48 | -8.615850e-47 |
| Msa0604290 | Msa1192140 | -0.811638 | 6.333755e-51 | -8.615850e-47 |
| Msa0610550 | Msa1192140 | -0.810066 | 1.386284e-50 | -8.615850e-47 |
| Msa0646420 | Msa1192140 | -0.801468 | 8.877641e-49 | -8.615850e-47 |
| Msa0662220 | Msa1192140 | -0.808061 | 3.726149e-50 | -8.615850e-47 |
| Msa0693210 | Msa1192140 | -0.819947 | 8.887752e-53 | -8.615850e-47 |
| Msa0707010 | Msa1192140 | -0.823069 | 1.689092e-53 | -8.615850e-47 |
| Msa0722300 | Msa1192140 | 0.811711 | 6.106235e-51 | -8.615850e-47 |
| Msa0722350 | Msa1192140 | 0.805508 | 1.290291e-49 | -8.615850e-47 |
| Msa0746170 | Msa1192140 | -0.803180 | 3.943036e-49 | -8.615850e-47 |
| Msa0746210 | Msa1192140 | -0.802749 | 4.840085e-49 | -8.615850e-47 |
| Msa0828590 | Msa1192140 | -0.816283 | 5.989629e-52 | -8.615850e-47 |
| Msa0838370 | Msa1192140 | -0.831009 | 2.128492e-55 | -8.615850e-47 |
| Msa0194920 | Msa1192140 | -0.804248 | 2.366694e-49 | -8.615850e-47 |
| Msa0215990 | Msa1192140 | -0.836116 | 1.130057e-56 | -8.615850e-47 |
| Msa0217670 | Msa1192140 | -0.812818 | 3.500579e-51 | -8.615850e-47 |
| Msa0377820 | Msa1192140 | -0.805086 | 1.581508e-49 | -8.615850e-47 |
| Msa0385500 | Msa1192140 | -0.822104 | 2.831317e-53 | -8.615850e-47 |
| Msa0386770 | Msa1192140 | -0.800371 | 1.487184e-48 | -8.615850e-47 |
| Msa0462600 | Msa1192140 | -0.806423 | 8.287058e-50 | -8.615850e-47 |
| Msa0472930 | Msa1192140 | -0.805138 | 1.542644e-49 | -8.615850e-47 |
| Msa0244970 | Msa1192140 | -0.809991 | 1.439221e-50 | -8.615850e-47 |
| Msa0244980 | Msa1192140 | -0.816056 | 6.730735e-52 | -8.615850e-47 |
| Msa0245580 | Msa1192140 | -0.825749 | 3.955572e-54 | -8.615850e-47 |
| Msa0296790 | Msa1192140 | -0.820988 | 5.126024e-53 | -8.615850e-47 |
| Msa1109780 | Msa1192140 | 0.801008 | 1.102443e-48 | -8.615850e-47 |
| Msa1130400 | Msa1192140 | -0.803287 | 3.746891e-49 | -8.615850e-47 |
| Msa1190100 | Msa1192140 | 0.814173 | 1.762610e-51 | -8.615850e-47 |
| Msa1192140 | Msa1374390 | 0.809755 | 1.617357e-50 | -8.615850e-47 |
| Msa1192140 | Msa1458290 | -0.806565 | 7.733554e-50 | -8.615850e-47 |
| Msa0515340 | Msa1192140 | -0.808880 | 2.491942e-50 | -8.615850e-47 |
| Msa0542560 | Msa1192140 | -0.832451 | 9.384845e-56 | -8.615850e-47 |
| Msa0844280 | Msa1192140 | -0.813807 | 2.123171e-51 | -8.615850e-47 |
| Msa0858440 | Msa1192140 | -0.812541 | 4.025014e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1192140 | MtrunA17_Chr8g0362331 | 87.546 | 273 | 18 | 4 | 2 | 264 | 1 | 267 | 4.80e-139 | 392 |
| Msa1192140 | MtrunA17_Chr5g0416091 | 61.257 | 191 | 63 | 3 | 81 | 264 | 75 | 261 | 1.11e-79 | 241 |
| Msa1192140 | MtrunA17_Chr7g0274781 | 36.000 | 200 | 116 | 4 | 73 | 264 | 31 | 226 | 6.87e-44 | 148 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1192140 | AT1G14410.1 | 60.360 | 222 | 77 | 2 | 49 | 264 | 47 | 263 | 2.02e-96 | 284 |
| Msa1192140 | AT2G02740.1 | 60.633 | 221 | 74 | 4 | 51 | 264 | 54 | 268 | 4.30e-92 | 273 |
| Msa1192140 | AT1G71260.1 | 41.463 | 164 | 90 | 1 | 87 | 244 | 53 | 216 | 7.35e-45 | 151 |
Find 85 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCGGAATACTCCGGATTTA+TGG | 0.234925 | 8_1:+37460741 | None:intergenic |
| AGCAGCCTTCCCTTTGTAAA+TGG | 0.248567 | 8_1:+37463888 | None:intergenic |
| GGTGTAGTGGGAGGAGGAGG+GGG | 0.250693 | 8_1:+37464180 | None:intergenic |
| CAACTTTGAAATGTGCTAAA+TGG | 0.273497 | 8_1:-37460610 | Msa1192140:three_prime_UTR |
| GGGTGTAGTGGGAGGAGGAG+GGG | 0.309825 | 8_1:+37464179 | None:intergenic |
| TATATCATGCCATACCTTCT+AGG | 0.331839 | 8_1:-37460784 | Msa1192140:CDS |
| TCTAAAACAATTAATCTAAC+AGG | 0.332954 | 8_1:+37460577 | None:intergenic |
| CAGGGGCATACAAGATATCT+AGG | 0.351989 | 8_1:-37463317 | Msa1192140:CDS |
| ACCACCGGAATTCGCGCCTT+TGG | 0.357831 | 8_1:-37463848 | Msa1192140:CDS |
| GTGTAGTGGGAGGAGGAGGG+GGG | 0.362307 | 8_1:+37464181 | None:intergenic |
| GAAGTACCTGAAGGGTTGTT+GGG | 0.369200 | 8_1:+37464156 | None:intergenic |
| TGTATCTAAAGCAGAGTTAT+CGG | 0.376960 | 8_1:-37461442 | Msa1192140:CDS |
| CAAAGGTATGCCAACCTAGA+AGG | 0.381461 | 8_1:+37460770 | None:intergenic |
| ACATCCAAAGGCGCGAATTC+CGG | 0.385464 | 8_1:+37463844 | None:intergenic |
| TAGTAATAATTAAAGAGAAT+TGG | 0.387933 | 8_1:-37460464 | Msa1192140:three_prime_UTR |
| GGGGTGTAGTGGGAGGAGGA+GGG | 0.394887 | 8_1:+37464178 | None:intergenic |
| GATAACTCTGCTTTAGATAC+AGG | 0.397032 | 8_1:+37461444 | None:intergenic |
| AACAATGCTAATCCAAGATA+TGG | 0.413675 | 8_1:-37460712 | Msa1192140:CDS |
| CTTCAGTTTGCGCCCTCTGT+TGG | 0.417534 | 8_1:-37463279 | Msa1192140:CDS |
| TTTGGAAGAGAAAGAGTTGT+TGG | 0.420521 | 8_1:+37464281 | None:intergenic |
| CATGTTATCTGTGGATGAAA+TGG | 0.422705 | 8_1:-37462643 | Msa1192140:CDS |
| TCGTAGTCTCCACCATATCT+TGG | 0.423400 | 8_1:+37460700 | None:intergenic |
| TGTTGGTAGTGAAAAGTTTG+AGG | 0.441986 | 8_1:+37464298 | None:intergenic |
| TTGGTCCACGTCAATATGAT+TGG | 0.450450 | 8_1:-37463260 | Msa1192140:CDS |
| GGCGCGAATTCCGGTGGTCT+AGG | 0.461203 | 8_1:+37463853 | None:intergenic |
| AGTTGGAGCTTTGCCACCTA+GGG | 0.463185 | 8_1:-37463926 | Msa1192140:CDS |
| TAGTTGGAGCTTTGCCACCT+AGG | 0.466878 | 8_1:-37463927 | Msa1192140:CDS |
| AGAAGTACCTGAAGGGTTGT+TGG | 0.475238 | 8_1:+37464155 | None:intergenic |
| CTTTGCAAACTCCATAAATC+CGG | 0.480571 | 8_1:-37460752 | Msa1192140:CDS |
| ATATGATTGGAATAGAAAAC+AGG | 0.497404 | 8_1:-37463247 | Msa1192140:intron |
| AAACCAGAACCATCCGGAAA+AGG | 0.498684 | 8_1:+37461991 | None:intergenic |
| AGACTACGAATGGAACAGAT+AGG | 0.502738 | 8_1:-37460686 | Msa1192140:exon |
| GTGAGGGGTTTGAATTTGAA+AGG | 0.503784 | 8_1:+37464249 | None:intergenic |
| TTGGTCATTCCATTTACAAA+GGG | 0.507287 | 8_1:-37463897 | Msa1192140:CDS |
| AACTACCTTCCGCCTTTGAA+AGG | 0.515428 | 8_1:+37462570 | None:intergenic |
| GTGTGATTAGCCTTGGTGCA+AGG | 0.517803 | 8_1:-37462617 | Msa1192140:CDS |
| TTTGAAATGTGCTAAATGGC+TGG | 0.518436 | 8_1:-37460606 | Msa1192140:three_prime_UTR |
| GTTGGTAGTGAAAAGTTTGA+GGG | 0.523331 | 8_1:+37464299 | None:intergenic |
| GTGATGGTGGTTGTGAGTGT+AGG | 0.526375 | 8_1:+37464358 | None:intergenic |
| ATGTTATCTGTGGATGAAAT+GGG | 0.526542 | 8_1:-37462642 | Msa1192140:CDS |
| CGGATTTATGGAGTTTGCAA+AGG | 0.530016 | 8_1:+37460753 | None:intergenic |
| TTGCCACCTAGGGTTTATGT+TGG | 0.531185 | 8_1:-37463916 | Msa1192140:CDS |
| GTATGCCAACCTAGAAGGTA+TGG | 0.531319 | 8_1:+37460775 | None:intergenic |
| CACTATCACTCCTAGACCAC+CGG | 0.536143 | 8_1:-37463863 | Msa1192140:CDS |
| GTTGGTCATTCCATTTACAA+AGG | 0.542041 | 8_1:-37463898 | Msa1192140:CDS |
| TGTGATTAGCCTTGGTGCAA+GGG | 0.548806 | 8_1:-37462616 | Msa1192140:CDS |
| AAGTACCTGAAGGGTTGTTG+GGG | 0.551241 | 8_1:+37464157 | None:intergenic |
| TTCGCCGCTGCGGAATACTC+CGG | 0.560202 | 8_1:+37460733 | None:intergenic |
| TCATGCCATACCTTCTAGGT+TGG | 0.568540 | 8_1:-37460780 | Msa1192140:CDS |
| TCATTCCATTTACAAAGGGA+AGG | 0.568592 | 8_1:-37463893 | Msa1192140:CDS |
| TGATGAAGGCAAAGTCAGAA+AGG | 0.570422 | 8_1:-37462028 | Msa1192140:CDS |
| CTATTCCAATCATATTGACG+TGG | 0.581031 | 8_1:+37463255 | None:intergenic |
| GACTACGAATGGAACAGATA+GGG | 0.588595 | 8_1:-37460685 | Msa1192140:exon |
| ATTAGCATTGTTCGCCGCTG+CGG | 0.595298 | 8_1:+37460723 | None:intergenic |
| GAGATGGTGATGTTATTGCT+TGG | 0.599209 | 8_1:-37460541 | Msa1192140:three_prime_UTR |
| TCAAGACAAAACTGCGAACG+TGG | 0.600551 | 8_1:-37461484 | Msa1192140:CDS |
| GTGGCGGCATCTGACAGTGA+GGG | 0.604919 | 8_1:+37464233 | None:intergenic |
| AATGCTAATCCAAGATATGG+TGG | 0.607036 | 8_1:-37460709 | Msa1192140:CDS |
| ATGGGAAGTGTGATTAGCCT+TGG | 0.609938 | 8_1:-37462624 | Msa1192140:CDS |
| ATGATCCTTTCAAAGGCGGA+AGG | 0.610678 | 8_1:-37462575 | Msa1192140:intron |
| TTTCATGATCCTTTCAAAGG+CGG | 0.614878 | 8_1:-37462579 | Msa1192140:CDS |
| GAATGACCAACATAAACCCT+AGG | 0.616287 | 8_1:+37463910 | None:intergenic |
| AGGGGCATACAAGATATCTA+GGG | 0.628813 | 8_1:-37463316 | Msa1192140:CDS |
| AGTACCTGAAGGGTTGTTGG+GGG | 0.634191 | 8_1:+37464158 | None:intergenic |
| ACGCTTATACTTACATCCAA+AGG | 0.634632 | 8_1:+37463832 | None:intergenic |
| AGTGGCGGCATCTGACAGTG+AGG | 0.635743 | 8_1:+37464232 | None:intergenic |
| GTACCTGAAGGGTTGTTGGG+GGG | 0.637107 | 8_1:+37464159 | None:intergenic |
| CATGTTATGATTAGTGCGTG+TGG | 0.637115 | 8_1:-37460516 | Msa1192140:three_prime_UTR |
| CTTAACTTAAACAAGTAACA+AGG | 0.637648 | 8_1:-37460285 | Msa1192140:intron |
| TCCAAAGGCGCGAATTCCGG+TGG | 0.638065 | 8_1:+37463847 | None:intergenic |
| TATTGACGTGGACCAACAGA+GGG | 0.638400 | 8_1:+37463267 | None:intergenic |
| GAAGATGTTGATGAGAGTGA+TGG | 0.645385 | 8_1:+37464342 | None:intergenic |
| GGTTGAAGACGTCAGAGTGG+CGG | 0.645736 | 8_1:+37464217 | None:intergenic |
| ATAACTCTGCTTTAGATACA+GGG | 0.647998 | 8_1:+37461445 | None:intergenic |
| GCAGCTGTTCATGTTATCTG+TGG | 0.648047 | 8_1:-37462652 | Msa1192140:intron |
| AAGTGTACATGAGACATCAT+CGG | 0.648426 | 8_1:+37464384 | None:intergenic |
| TGGCGGCATCTGACAGTGAG+GGG | 0.652628 | 8_1:+37464234 | None:intergenic |
| GATATGGTGGAGACTACGAA+TGG | 0.656703 | 8_1:-37460696 | Msa1192140:CDS |
| GATGTTGATGAGAGTGATGG+TGG | 0.660347 | 8_1:+37464345 | None:intergenic |
| ATATTGACGTGGACCAACAG+AGG | 0.661885 | 8_1:+37463266 | None:intergenic |
| GCATACAAGATATCTAGGGA+TGG | 0.666950 | 8_1:-37463312 | Msa1192140:CDS |
| CACAAGACTCCCTTGCACCA+AGG | 0.667591 | 8_1:+37462607 | None:intergenic |
| TGACCAACATAAACCCTAGG+TGG | 0.694993 | 8_1:+37463913 | None:intergenic |
| AAGGGTTGAAGACGTCAGAG+TGG | 0.701698 | 8_1:+37464214 | None:intergenic |
| AAATCCGGAGTATTCCGCAG+CGG | 0.752636 | 8_1:-37460737 | Msa1192140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGAAACTTTTTTAAAAT+GGG | + | chr8_1:37460658-37460677 | None:intergenic | 10.0% |
| !!! | AAAATGAAACTTTTTTAAAA+TGG | + | chr8_1:37460659-37460678 | None:intergenic | 10.0% |
| !! | TATTGTGTAATTAATTAATT+AGG | + | chr8_1:37463028-37463047 | None:intergenic | 10.0% |
| !!! | ATTAATTGTTTTAGAAATTT+TGG | - | chr8_1:37464157-37464176 | Msa1192140:intron | 10.0% |
| !!! | AATGAAACTTTTTTAAAATG+GGG | + | chr8_1:37460657-37460676 | None:intergenic | 15.0% |
| !!! | TGTTTGTATTTTGTAATTTA+CGG | - | chr8_1:37461509-37461528 | Msa1192140:intron | 15.0% |
| !! | AAATGAAATATATCTAGATT+CGG | + | chr8_1:37462566-37462585 | None:intergenic | 15.0% |
| !!! | TTTATTATGGCATTTTTTAA+AGG | - | chr8_1:37463216-37463235 | Msa1192140:intron | 15.0% |
| !! | TAGTAATAATTAAAGAGAAT+TGG | - | chr8_1:37464262-37464281 | Msa1192140:CDS | 15.0% |
| !! | GATATCTTAAATAAGTAATA+AGG | - | chr8_1:37464410-37464429 | Msa1192140:five_prime_UTR | 15.0% |
| !!! | AAACATGTTTTAGAGAAAAA+GGG | + | chr8_1:37460612-37460631 | None:intergenic | 20.0% |
| !!! | AAAACATGTTTTAGAGAAAA+AGG | + | chr8_1:37460613-37460632 | None:intergenic | 20.0% |
| !!! | TGACGTATGATTATTTATTT+TGG | - | chr8_1:37461289-37461308 | Msa1192140:intron | 20.0% |
| !!! | GACGTATGATTATTTATTTT+GGG | - | chr8_1:37461290-37461309 | Msa1192140:intron | 20.0% |
| !!! | AGAATTGAATGTTTTTAATG+TGG | - | chr8_1:37461363-37461382 | Msa1192140:intron | 20.0% |
| !!! | GTTTGTATTTTGTAATTTAC+GGG | - | chr8_1:37461510-37461529 | Msa1192140:intron | 20.0% |
| !! | CGAAATACAAAAAAAAAAAG+TGG | + | chr8_1:37461898-37461917 | None:intergenic | 20.0% |
| !! | TGATTATGATATTCTTTGTA+TGG | - | chr8_1:37461981-37462000 | Msa1192140:intron | 20.0% |
| !!! | TATTCTTTGTATGGTTTTAT+TGG | - | chr8_1:37461990-37462009 | Msa1192140:intron | 20.0% |
| !!! | ATTTTTGATCCTTTTCAAAT+TGG | + | chr8_1:37462491-37462510 | None:intergenic | 20.0% |
| !!! | TTCATTTTATGTTTGTTGTA+TGG | - | chr8_1:37462579-37462598 | Msa1192140:CDS | 20.0% |
| !!! | TCATTTTATGTTTGTTGTAT+GGG | - | chr8_1:37462580-37462599 | Msa1192140:CDS | 20.0% |
| !! | TGATGCAAAAATTGAAAATA+AGG | + | chr8_1:37462796-37462815 | None:intergenic | 20.0% |
| !! | TTGAAAGATGATATAGATTA+TGG | + | chr8_1:37463114-37463133 | None:intergenic | 20.0% |
| !!! | TTCAACCTGATTAATATTTT+TGG | - | chr8_1:37463905-37463924 | Msa1192140:CDS | 20.0% |
| !! | AAAAGCCAAAAATATTAATC+AGG | + | chr8_1:37463913-37463932 | None:intergenic | 20.0% |
| !!! | TCTAAAACAATTAATCTAAC+AGG | + | chr8_1:37464152-37464171 | None:intergenic | 20.0% |
| !!! | TCTTTCTATTTTTTGTAGAT+AGG | + | chr8_1:37464375-37464394 | None:intergenic | 20.0% |
| !! | AGAAAGAAAAAAAAGAGAAT+TGG | - | chr8_1:37464388-37464407 | Msa1192140:exon | 20.0% |
| ! | TTTAGAGAAAAAGGGTTAAA+GGG | + | chr8_1:37460604-37460623 | None:intergenic | 25.0% |
| !!! | TTTTAGAGAAAAAGGGTTAA+AGG | + | chr8_1:37460605-37460624 | None:intergenic | 25.0% |
| ! | ACTATGGATAATGAAATTGT+TGG | - | chr8_1:37460692-37460711 | Msa1192140:CDS | 25.0% |
| !! | ATAATGAAATTGTTGGTGAA+AGG | - | chr8_1:37460699-37460718 | Msa1192140:CDS | 25.0% |
| ! | ATATGATTGGAATAGAAAAC+AGG | - | chr8_1:37461479-37461498 | Msa1192140:CDS | 25.0% |
| ! | AAGTTCTTATATGATCTAAC+AGG | - | chr8_1:37461557-37461576 | Msa1192140:intron | 25.0% |
| ! | AGAATTACAATACTATGTGA+TGG | - | chr8_1:37461646-37461665 | Msa1192140:intron | 25.0% |
| !! | AATACTATGTGATGGAATTT+GGG | - | chr8_1:37461654-37461673 | Msa1192140:intron | 25.0% |
| ! | GAACTATTAAGTGTTAATCT+TGG | - | chr8_1:37461685-37461704 | Msa1192140:intron | 25.0% |
| !!! | TTTTTTCCAGTGTTGTTTAA+TGG | - | chr8_1:37461731-37461750 | Msa1192140:intron | 25.0% |
| ! | TTGTACAAAATAGCATATCA+TGG | + | chr8_1:37461807-37461826 | None:intergenic | 25.0% |
| !!! | TTTTTTCATGATCCTTTCAA+AGG | - | chr8_1:37462144-37462163 | Msa1192140:intron | 25.0% |
| !!! | ACTTCCTAATTGTTTTGTAA+TGG | - | chr8_1:37462188-37462207 | Msa1192140:intron | 25.0% |
| !!! | CTTCCTAATTGTTTTGTAAT+GGG | - | chr8_1:37462189-37462208 | Msa1192140:intron | 25.0% |
| ! | AATCCCATTACAAAACAATT+AGG | + | chr8_1:37462195-37462214 | None:intergenic | 25.0% |
| !! | TTTTATTCAATGTCCATATG+TGG | - | chr8_1:37462510-37462529 | Msa1192140:intron | 25.0% |
| !!! | GGTTTTGATGTTATAAATCA+TGG | - | chr8_1:37462621-37462640 | Msa1192140:CDS | 25.0% |
| !! | ACTGCATAAAAAGACATTTT+CGG | + | chr8_1:37462679-37462698 | None:intergenic | 25.0% |
| ! | TGTATTTATGATGACAACTT+AGG | + | chr8_1:37463069-37463088 | None:intergenic | 25.0% |
| ! | AGCAGATATTGCATAAAAAT+AGG | + | chr8_1:37463141-37463160 | None:intergenic | 25.0% |
| ! | AAAAATGCCATAATAAAGTC+AGG | + | chr8_1:37463213-37463232 | None:intergenic | 25.0% |
| ! | TACTAAGAGTTGTCAAATAA+CGG | - | chr8_1:37463683-37463702 | Msa1192140:intron | 25.0% |
| ! | CTTAACTTAAACAAGTAACA+AGG | - | chr8_1:37464441-37464460 | Msa1192140:five_prime_UTR | 25.0% |
| ! | TTTGAAAGGAAGAGAGTTTT+TGG | + | chr8_1:37460466-37460485 | None:intergenic | 30.0% |
| TTAGAGAAAAAGGGTTAAAG+GGG | + | chr8_1:37460603-37460622 | None:intergenic | 30.0% | |
| TTGGTCATTCCATTTACAAA+GGG | - | chr8_1:37460829-37460848 | Msa1192140:intron | 30.0% | |
| TTGTACTAAATCGCGTAAAA+TGG | + | chr8_1:37461015-37461034 | None:intergenic | 30.0% | |
| !! | TACAAAGTGTTGTCAATTTG+CGG | - | chr8_1:37461030-37461049 | Msa1192140:intron | 30.0% |
| ATTGACTAAATCGCGTATAA+TGG | + | chr8_1:37461099-37461118 | None:intergenic | 30.0% | |
| AGCACATATTTGATAAACCA+CGG | - | chr8_1:37461142-37461161 | Msa1192140:intron | 30.0% | |
| TTGTTCCATTATACGCAATT+TGG | - | chr8_1:37461165-37461184 | Msa1192140:intron | 30.0% | |
| TTGTACCAAATTGCGTATAA+TGG | + | chr8_1:37461173-37461192 | None:intergenic | 30.0% | |
| !! | TACAAAGTGTTGTCAATTTG+CGG | - | chr8_1:37461030-37461049 | Msa1192140:intron | 30.0% |
| ! | GTTTTTAATGTGGAACGTTT+TGG | - | chr8_1:37461373-37461392 | Msa1192140:intron | 30.0% |
| ! | TTTTGGTGAATTTTGTAGTC+AGG | - | chr8_1:37461390-37461409 | Msa1192140:intron | 30.0% |
| ! | TTTGGTGAATTTTGTAGTCA+GGG | - | chr8_1:37461391-37461410 | Msa1192140:intron | 30.0% |
| !! | TTTTCTGAAAACTTACGTCA+TGG | - | chr8_1:37461586-37461605 | Msa1192140:intron | 30.0% |
| ! | TTTCTGAAAACTTACGTCAT+GGG | - | chr8_1:37461587-37461606 | Msa1192140:intron | 30.0% |
| ! | CAATACTATGTGATGGAATT+TGG | - | chr8_1:37461653-37461672 | Msa1192140:intron | 30.0% |
| AAACAATGTCAAACTCTATC+AGG | + | chr8_1:37461952-37461971 | None:intergenic | 30.0% | |
| TAAAATGTGAGTTCATCATC+TGG | - | chr8_1:37462040-37462059 | Msa1192140:intron | 30.0% | |
| ATGTTATCTGTGGATGAAAT+GGG | - | chr8_1:37462084-37462103 | Msa1192140:intron | 30.0% | |
| TGCAGTAAAAATCTAAGCAA+TGG | + | chr8_1:37462239-37462258 | None:intergenic | 30.0% | |
| TCTGTATGAACTGACATATA+TGG | + | chr8_1:37462361-37462380 | None:intergenic | 30.0% | |
| TCGGTATTTCCAATTTGAAA+AGG | - | chr8_1:37462479-37462498 | Msa1192140:intron | 30.0% | |
| !!! | TTTTATGTTTGTTGTATGGG+TGG | - | chr8_1:37462583-37462602 | Msa1192140:CDS | 30.0% |
| ATGAAGAAAGAACATTACTG+AGG | + | chr8_1:37462770-37462789 | None:intergenic | 30.0% | |
| TTGTACAGAACTGAATCAAT+CGG | + | chr8_1:37462948-37462967 | None:intergenic | 30.0% | |
| TGATTCAGTTCTGTACAAAA+AGG | - | chr8_1:37462950-37462969 | Msa1192140:intron | 30.0% | |
| ! | ATAACTCTGCTTTAGATACA+GGG | + | chr8_1:37463284-37463303 | None:intergenic | 30.0% |
| ! | TGTATCTAAAGCAGAGTTAT+CGG | - | chr8_1:37463284-37463303 | Msa1192140:CDS | 30.0% |
| ACATTGCAATTAGAAATCAG+AGG | + | chr8_1:37463339-37463358 | None:intergenic | 30.0% | |
| AATACAGTGTTGTCAATTAG+CGG | - | chr8_1:37463605-37463624 | Msa1192140:intron | 30.0% | |
| AGTGAATGAATAAACATGAC+AGG | + | chr8_1:37463804-37463823 | None:intergenic | 30.0% | |
| AACAATGCTAATCCAAGATA+TGG | - | chr8_1:37464014-37464033 | Msa1192140:intron | 30.0% | |
| !! | CAACTTTGAAATGTGCTAAA+TGG | - | chr8_1:37464116-37464135 | Msa1192140:intron | 30.0% |
| AAGTGTACATGAGACATCAT+CGG | + | chr8_1:37460345-37460364 | None:intergenic | 35.0% | |
| !! | GTTGGTAGTGAAAAGTTTGA+GGG | + | chr8_1:37460430-37460449 | None:intergenic | 35.0% |
| !! | TGTTGGTAGTGAAAAGTTTG+AGG | + | chr8_1:37460431-37460450 | None:intergenic | 35.0% |
| TTTGGAAGAGAAAGAGTTGT+TGG | + | chr8_1:37460448-37460467 | None:intergenic | 35.0% | |
| TAGAGAAAAAGGGTTAAAGG+GGG | + | chr8_1:37460602-37460621 | None:intergenic | 35.0% | |
| ! | AAGGCACTAGGAATTTGTAA+AGG | - | chr8_1:37460718-37460737 | Msa1192140:CDS | 35.0% |
| AGGCACTAGGAATTTGTAAA+GGG | - | chr8_1:37460719-37460738 | Msa1192140:CDS | 35.0% | |
| GTTTGTCTAATGCTCTAACT+TGG | - | chr8_1:37460750-37460769 | Msa1192140:CDS | 35.0% | |
| GTTGGTCATTCCATTTACAA+AGG | - | chr8_1:37460828-37460847 | Msa1192140:intron | 35.0% | |
| TCATTCCATTTACAAAGGGA+AGG | - | chr8_1:37460833-37460852 | Msa1192140:intron | 35.0% | |
| ACGCTTATACTTACATCCAA+AGG | + | chr8_1:37460897-37460916 | None:intergenic | 35.0% | |
| ACGCGATTTAGTACAAATTG+CGG | - | chr8_1:37460946-37460965 | Msa1192140:intron | 35.0% | |
| TTGTCAATTTGCGGTTATAG+TGG | - | chr8_1:37461039-37461058 | Msa1192140:intron | 35.0% | |
| TACGCGATTTAGTCAATTTG+CGG | - | chr8_1:37461102-37461121 | Msa1192140:intron | 35.0% | |
| !!! | TATTTTGGGTTTGATTGTGC+TGG | - | chr8_1:37461304-37461323 | Msa1192140:intron | 35.0% |
| ! | TTGGTGAATTTTGTAGTCAG+GGG | - | chr8_1:37461392-37461411 | Msa1192140:intron | 35.0% |
| CTATTCCAATCATATTGACG+TGG | + | chr8_1:37461474-37461493 | None:intergenic | 35.0% | |
| TTATATGATCTAACAGGTGC+TGG | - | chr8_1:37461563-37461582 | Msa1192140:intron | 35.0% | |
| !! | TTTCCAGTGTTGTTTAATGG+CGG | - | chr8_1:37461734-37461753 | Msa1192140:intron | 35.0% |
| TATTTCGCTATTGACAACAC+TGG | - | chr8_1:37461911-37461930 | Msa1192140:intron | 35.0% | |
| !! | CAAACTCTATCAGGTTTTGT+TGG | + | chr8_1:37461943-37461962 | None:intergenic | 35.0% |
| CATGTTATCTGTGGATGAAA+TGG | - | chr8_1:37462083-37462102 | Msa1192140:intron | 35.0% | |
| TTTCATGATCCTTTCAAAGG+CGG | - | chr8_1:37462147-37462166 | Msa1192140:intron | 35.0% | |
| ! | ATTGCCTCTTTTTCTATGAG+AGG | - | chr8_1:37462265-37462284 | Msa1192140:intron | 35.0% |
| ! | TTGCCTCTTTTTCTATGAGA+GGG | - | chr8_1:37462266-37462285 | Msa1192140:intron | 35.0% |
| TATGTCAGTTCATACAGATC+TGG | - | chr8_1:37462363-37462382 | Msa1192140:intron | 35.0% | |
| ATGTCAGTTCATACAGATCT+GGG | - | chr8_1:37462364-37462383 | Msa1192140:intron | 35.0% | |
| TTGATTGAACAGTCCAAATG+TGG | + | chr8_1:37462435-37462454 | None:intergenic | 35.0% | |
| ACTGTTCAATCAAGATCTCA+TGG | - | chr8_1:37462442-37462461 | Msa1192140:intron | 35.0% | |
| ! | GTCTTTTTATGCAGTGATGA+AGG | - | chr8_1:37462684-37462703 | Msa1192140:intron | 35.0% |
| ! | TTTGAAGATTGAGCCTTTTC+CGG | - | chr8_1:37462722-37462741 | Msa1192140:intron | 35.0% |
| AAAAAGAAACCAGAACCATC+CGG | + | chr8_1:37462744-37462763 | None:intergenic | 35.0% | |
| !! | TCCTTTCCATATTCAAGTTG+CGG | - | chr8_1:37462831-37462850 | Msa1192140:intron | 35.0% |
| GTACTGAAATGTATAGACAC+TGG | - | chr8_1:37462972-37462991 | Msa1192140:intron | 35.0% | |
| ! | GATAACTCTGCTTTAGATAC+AGG | + | chr8_1:37463285-37463304 | None:intergenic | 35.0% |
| TGCAATTAGAAATCAGAGGT+AGG | + | chr8_1:37463335-37463354 | None:intergenic | 35.0% | |
| !! | ACTATAAGAGCATCACATCA+TGG | + | chr8_1:37463370-37463389 | None:intergenic | 35.0% |
| GTGATGCTCTTATAGTTCAA+TGG | - | chr8_1:37463374-37463393 | Msa1192140:intron | 35.0% | |
| ! | CAATGGAATTTGCTTGACAA+TGG | + | chr8_1:37463494-37463513 | None:intergenic | 35.0% |
| AAAAAGACATGTACCTAGTG+TGG | + | chr8_1:37463522-37463541 | None:intergenic | 35.0% | |
| ACATAGTAGTGCTTCAACAA+AGG | - | chr8_1:37463830-37463849 | Msa1192140:intron | 35.0% | |
| TATATCATGCCATACCTTCT+AGG | - | chr8_1:37463942-37463961 | Msa1192140:intron | 35.0% | |
| CTTTGCAAACTCCATAAATC+CGG | - | chr8_1:37463974-37463993 | Msa1192140:intron | 35.0% | |
| AATGCTAATCCAAGATATGG+TGG | - | chr8_1:37464017-37464036 | Msa1192140:intron | 35.0% | |
| ! | TTTGAAATGTGCTAAATGGC+TGG | - | chr8_1:37464120-37464139 | Msa1192140:intron | 35.0% |
| !!! | AGAAATTTTGGCTCATGAGA+TGG | - | chr8_1:37464169-37464188 | Msa1192140:CDS | 35.0% |
| GATATCATGCCGAAATTGTT+AGG | - | chr8_1:37464284-37464303 | Msa1192140:CDS | 35.0% | |
| ATAAACTCACACACACAAAG+TGG | + | chr8_1:37464346-37464365 | None:intergenic | 35.0% | |
| ! | GAAGATGTTGATGAGAGTGA+TGG | + | chr8_1:37460387-37460406 | None:intergenic | 40.0% |
| GTGAGGGGTTTGAATTTGAA+AGG | + | chr8_1:37460480-37460499 | None:intergenic | 40.0% | |
| !! | GGGAAAAAGAAGTACCTGAA+GGG | + | chr8_1:37460581-37460600 | None:intergenic | 40.0% |
| AGAGAAAAAGGGTTAAAGGG+GGG | + | chr8_1:37460601-37460620 | None:intergenic | 40.0% | |
| !! | AATTGTTGGTGAAAGGCACT+AGG | - | chr8_1:37460706-37460725 | Msa1192140:CDS | 40.0% |
| TGTGTGTGTGTGTGTTTAGT+TGG | - | chr8_1:37460783-37460802 | Msa1192140:CDS | 40.0% | |
| GAATGACCAACATAAACCCT+AGG | + | chr8_1:37460819-37460838 | None:intergenic | 40.0% | |
| AGTACAAATTGCGGCTATAG+TGG | - | chr8_1:37460955-37460974 | Msa1192140:intron | 40.0% | |
| TAGTCAATTTGCGGCTATAG+TGG | - | chr8_1:37461111-37461130 | Msa1192140:intron | 40.0% | |
| TTGTCAATTTGCGGCTATAG+TGG | - | chr8_1:37461197-37461216 | Msa1192140:intron | 40.0% | |
| ! | AGGGGCATACAAGATATCTA+GGG | - | chr8_1:37461410-37461429 | Msa1192140:intron | 40.0% |
| GCATACAAGATATCTAGGGA+TGG | - | chr8_1:37461414-37461433 | Msa1192140:intron | 40.0% | |
| TTGGTCCACGTCAATATGAT+TGG | - | chr8_1:37461466-37461485 | Msa1192140:CDS | 40.0% | |
| TTGTAATTTACGGGTGACGA+TGG | - | chr8_1:37461519-37461538 | Msa1192140:intron | 40.0% | |
| !!! | ATGGTTTTATTGGAGCTACG+AGG | - | chr8_1:37462000-37462019 | Msa1192140:CDS | 40.0% |
| ! | TTTTATTGGAGCTACGAGGT+TGG | - | chr8_1:37462004-37462023 | Msa1192140:CDS | 40.0% |
| ! | TGCCTCTTTTTCTATGAGAG+GGG | - | chr8_1:37462267-37462286 | Msa1192140:intron | 40.0% |
| ! | TTTTTCTATGAGAGGGGACA+TGG | - | chr8_1:37462273-37462292 | Msa1192140:intron | 40.0% |
| CATGGTCTAGATATCTAGCT+CGG | - | chr8_1:37462460-37462479 | Msa1192140:intron | 40.0% | |
| AACACATAGTCAGCCACATA+TGG | + | chr8_1:37462526-37462545 | None:intergenic | 40.0% | |
| TGATGAAGGCAAAGTCAGAA+AGG | - | chr8_1:37462698-37462717 | Msa1192140:intron | 40.0% | |
| ATAGTGCCGCAACTTGAATA+TGG | + | chr8_1:37462840-37462859 | None:intergenic | 40.0% | |
| TAATAAAGTCAGGACTCGAG+AGG | + | chr8_1:37463203-37463222 | None:intergenic | 40.0% | |
| CTCGAGTCCTGACTTTATTA+TGG | - | chr8_1:37463203-37463222 | Msa1192140:intron | 40.0% | |
| ! | GGTTCTACGCTCAATTTTCA+AGG | - | chr8_1:37463305-37463324 | Msa1192140:CDS | 40.0% |
| CTATTCAGTGTTGTCGATCA+CGG | + | chr8_1:37463757-37463776 | None:intergenic | 40.0% | |
| ACAACACTGAATAGCTCAAC+AGG | - | chr8_1:37463763-37463782 | Msa1192140:intron | 40.0% | |
| CGGATTTATGGAGTTTGCAA+AGG | + | chr8_1:37463976-37463995 | None:intergenic | 40.0% | |
| AGACTACGAATGGAACAGAT+AGG | - | chr8_1:37464040-37464059 | Msa1192140:intron | 40.0% | |
| GACTACGAATGGAACAGATA+GGG | - | chr8_1:37464041-37464060 | Msa1192140:intron | 40.0% | |
| ! | GAGATGGTGATGTTATTGCT+TGG | - | chr8_1:37464185-37464204 | Msa1192140:CDS | 40.0% |
| CATGTTATGATTAGTGCGTG+TGG | - | chr8_1:37464210-37464229 | Msa1192140:CDS | 40.0% | |
| ! | GATGTTGATGAGAGTGATGG+TGG | + | chr8_1:37460384-37460403 | None:intergenic | 45.0% |
| AAGTACCTGAAGGGTTGTTG+GGG | + | chr8_1:37460572-37460591 | None:intergenic | 45.0% | |
| ! | GAAGTACCTGAAGGGTTGTT+GGG | + | chr8_1:37460573-37460592 | None:intergenic | 45.0% |
| !! | AGAAGTACCTGAAGGGTTGT+TGG | + | chr8_1:37460574-37460593 | None:intergenic | 45.0% |
| !! | GGGGAAAAAGAAGTACCTGA+AGG | + | chr8_1:37460582-37460601 | None:intergenic | 45.0% |
| TTGCCACCTAGGGTTTATGT+TGG | - | chr8_1:37460810-37460829 | Msa1192140:intron | 45.0% | |
| TGACCAACATAAACCCTAGG+TGG | + | chr8_1:37460816-37460835 | None:intergenic | 45.0% | |
| AGCAGCCTTCCCTTTGTAAA+TGG | + | chr8_1:37460841-37460860 | None:intergenic | 45.0% | |
| CGCGTAAAATGGAACAATCG+CGG | + | chr8_1:37461004-37461023 | None:intergenic | 45.0% | |
| ! | TGCGTATAATGGAACAACCG+TGG | + | chr8_1:37461162-37461181 | None:intergenic | 45.0% |
| ! | CAGGGGCATACAAGATATCT+AGG | - | chr8_1:37461409-37461428 | Msa1192140:intron | 45.0% |
| TATTGACGTGGACCAACAGA+GGG | + | chr8_1:37461462-37461481 | None:intergenic | 45.0% | |
| ATATTGACGTGGACCAACAG+AGG | + | chr8_1:37461463-37461482 | None:intergenic | 45.0% | |
| !! | AGCATTGATGCGTTGCATAG+CGG | - | chr8_1:37461860-37461879 | Msa1192140:intron | 45.0% |
| GCAGCTGTTCATGTTATCTG+TGG | - | chr8_1:37462074-37462093 | Msa1192140:intron | 45.0% | |
| !! | ATGGGAAGTGTGATTAGCCT+TGG | - | chr8_1:37462102-37462121 | Msa1192140:intron | 45.0% |
| !! | TGTGATTAGCCTTGGTGCAA+GGG | - | chr8_1:37462110-37462129 | Msa1192140:intron | 45.0% |
| ATGATCCTTTCAAAGGCGGA+AGG | - | chr8_1:37462151-37462170 | Msa1192140:intron | 45.0% | |
| AACTACCTTCCGCCTTTGAA+AGG | + | chr8_1:37462159-37462178 | None:intergenic | 45.0% | |
| GTCCCCTCTCATAGAAAAAG+AGG | + | chr8_1:37462272-37462291 | None:intergenic | 45.0% | |
| TCAAAACCTGTCCTCACATG+TGG | + | chr8_1:37462609-37462628 | None:intergenic | 45.0% | |
| ! | AAGATTGAGCCTTTTCCGGA+TGG | - | chr8_1:37462726-37462745 | Msa1192140:intron | 45.0% |
| AAACCAGAACCATCCGGAAA+AGG | + | chr8_1:37462738-37462757 | None:intergenic | 45.0% | |
| GCCGCAACTTGAATATGGAA+AGG | + | chr8_1:37462835-37462854 | None:intergenic | 45.0% | |
| TCAAGACAAAACTGCGAACG+TGG | - | chr8_1:37463242-37463261 | Msa1192140:intron | 45.0% | |
| TTCCATTGTCTGACCACACT+AGG | - | chr8_1:37463506-37463525 | Msa1192140:intron | 45.0% | |
| TACCTAGTGTGGTCAGACAA+TGG | + | chr8_1:37463511-37463530 | None:intergenic | 45.0% | |
| AATTAGCGGTCATAGCGTAG+CGG | - | chr8_1:37463619-37463638 | Msa1192140:intron | 45.0% | |
| TCATGCCATACCTTCTAGGT+TGG | - | chr8_1:37463946-37463965 | Msa1192140:intron | 45.0% | |
| GTATGCCAACCTAGAAGGTA+TGG | + | chr8_1:37463954-37463973 | None:intergenic | 45.0% | |
| ! | CAAAGGTATGCCAACCTAGA+AGG | + | chr8_1:37463959-37463978 | None:intergenic | 45.0% |
| TGCGGAATACTCCGGATTTA+TGG | + | chr8_1:37463988-37464007 | None:intergenic | 45.0% | |
| TCGTAGTCTCCACCATATCT+TGG | + | chr8_1:37464029-37464048 | None:intergenic | 45.0% | |
| ! | GATATGGTGGAGACTACGAA+TGG | - | chr8_1:37464030-37464049 | Msa1192140:intron | 45.0% |
| TCATGCCGAAATTGTTAGGC+CGG | - | chr8_1:37464288-37464307 | Msa1192140:CDS | 45.0% | |
| GACATCCGGCCTAACAATTT+CGG | + | chr8_1:37464296-37464315 | None:intergenic | 45.0% | |
| AACTCACACACACAAAGTGG+AGG | + | chr8_1:37464343-37464362 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTAAAATACTA+TGG | - | chr8_1:37460676-37460695 | Msa1192140:exon | 5.0% |
| !! | GTGATGGTGGTTGTGAGTGT+AGG | + | chr8_1:37460371-37460390 | None:intergenic | 50.0% |
| AAGGGTTGAAGACGTCAGAG+TGG | + | chr8_1:37460515-37460534 | None:intergenic | 50.0% | |
| AGTACCTGAAGGGTTGTTGG+GGG | + | chr8_1:37460571-37460590 | None:intergenic | 50.0% | |
| TAGTTGGAGCTTTGCCACCT+AGG | - | chr8_1:37460799-37460818 | Msa1192140:intron | 50.0% | |
| AGTTGGAGCTTTGCCACCTA+GGG | - | chr8_1:37460800-37460819 | Msa1192140:intron | 50.0% | |
| CACTATCACTCCTAGACCAC+CGG | - | chr8_1:37460863-37460882 | Msa1192140:intron | 50.0% | |
| ! | ACATCCAAAGGCGCGAATTC+CGG | + | chr8_1:37460885-37460904 | None:intergenic | 50.0% |
| !! | GTGTGATTAGCCTTGGTGCA+AGG | - | chr8_1:37462109-37462128 | Msa1192140:intron | 50.0% |
| ! | AAATCCGGAGTATTCCGCAG+CGG | - | chr8_1:37463989-37464008 | Msa1192140:intron | 50.0% |
| ATTAGCATTGTTCGCCGCTG+CGG | + | chr8_1:37464006-37464025 | None:intergenic | 50.0% | |
| GTTAGGCCGGATGTCATGAT+CGG | - | chr8_1:37464301-37464320 | Msa1192140:CDS | 50.0% | |
| TTAGGCCGGATGTCATGATC+GGG | - | chr8_1:37464302-37464321 | Msa1192140:CDS | 50.0% | |
| GGTTGAAGACGTCAGAGTGG+CGG | + | chr8_1:37460512-37460531 | None:intergenic | 55.0% | |
| GTACCTGAAGGGTTGTTGGG+GGG | + | chr8_1:37460570-37460589 | None:intergenic | 55.0% | |
| CTTCAGTTTGCGCCCTCTGT+TGG | - | chr8_1:37461447-37461466 | Msa1192140:CDS | 55.0% | |
| GCGCCGCCATTAAACAACAC+TGG | + | chr8_1:37461740-37461759 | None:intergenic | 55.0% | |
| CACAAGACTCCCTTGCACCA+AGG | + | chr8_1:37462122-37462141 | None:intergenic | 55.0% | |
| TGCACGCAGTCAGCCACATT+TGG | - | chr8_1:37462419-37462438 | Msa1192140:intron | 55.0% | |
| TGTATGGGTGGCCACATGTG+AGG | - | chr8_1:37462595-37462614 | Msa1192140:CDS | 55.0% | |
| ! | GAGCCTTTTCCGGATGGTTC+TGG | - | chr8_1:37462732-37462751 | Msa1192140:intron | 55.0% |
| TAGGCCGGATGTCATGATCG+GGG | - | chr8_1:37464303-37464322 | Msa1192140:CDS | 55.0% | |
| CGAACCCCGATCATGACATC+CGG | + | chr8_1:37464310-37464329 | None:intergenic | 55.0% | |
| CATGATCGGGGTTCGAACCT+CGG | - | chr8_1:37464315-37464334 | Msa1192140:CDS | 55.0% | |
| !! | CACACAAAGTGGAGGTACCG+AGG | + | chr8_1:37464335-37464354 | None:intergenic | 55.0% |
| TGGCGGCATCTGACAGTGAG+GGG | + | chr8_1:37460495-37460514 | None:intergenic | 60.0% | |
| GTGGCGGCATCTGACAGTGA+GGG | + | chr8_1:37460496-37460515 | None:intergenic | 60.0% | |
| AGTGGCGGCATCTGACAGTG+AGG | + | chr8_1:37460497-37460516 | None:intergenic | 60.0% | |
| ! | TTGTTGGGGGGTGTAGTGGG+AGG | + | chr8_1:37460558-37460577 | None:intergenic | 60.0% |
| ! | GGGTTGTTGGGGGGTGTAGT+GGG | + | chr8_1:37460561-37460580 | None:intergenic | 60.0% |
| ! | AGGGTTGTTGGGGGGTGTAG+TGG | + | chr8_1:37460562-37460581 | None:intergenic | 60.0% |
| ACACCCCCCAACAACCCTTC+AGG | - | chr8_1:37460564-37460583 | Msa1192140:three_prime_UTR | 60.0% | |
| ACCACCGGAATTCGCGCCTT+TGG | - | chr8_1:37460878-37460897 | Msa1192140:intron | 60.0% | |
| ! | TCCAAAGGCGCGAATTCCGG+TGG | + | chr8_1:37460882-37460901 | None:intergenic | 60.0% |
| GCTGACTGCGTGCAGTCATG+GGG | + | chr8_1:37462413-37462432 | None:intergenic | 60.0% | |
| GGCTGACTGCGTGCAGTCAT+GGG | + | chr8_1:37462414-37462433 | None:intergenic | 60.0% | |
| TGGCTGACTGCGTGCAGTCA+TGG | + | chr8_1:37462415-37462434 | None:intergenic | 60.0% | |
| TTCGCCGCTGCGGAATACTC+CGG | + | chr8_1:37463996-37464015 | None:intergenic | 60.0% | |
| GAGGGGGGTTTGGAGGGGAA+GGG | + | chr8_1:37460533-37460552 | None:intergenic | 65.0% | |
| AGGAGGAGGGGGGTTTGGAG+GGG | + | chr8_1:37460538-37460557 | None:intergenic | 65.0% | |
| GAGGAGGAGGGGGGTTTGGA+GGG | + | chr8_1:37460539-37460558 | None:intergenic | 65.0% | |
| ! | GTGTAGTGGGAGGAGGAGGG+GGG | + | chr8_1:37460548-37460567 | None:intergenic | 65.0% |
| ! | GGTGTAGTGGGAGGAGGAGG+GGG | + | chr8_1:37460549-37460568 | None:intergenic | 65.0% |
| ! | GGGTGTAGTGGGAGGAGGAG+GGG | + | chr8_1:37460550-37460569 | None:intergenic | 65.0% |
| ! | GGGGTGTAGTGGGAGGAGGA+GGG | + | chr8_1:37460551-37460570 | None:intergenic | 65.0% |
| ! | TTGGGGGGTGTAGTGGGAGG+AGG | + | chr8_1:37460555-37460574 | None:intergenic | 65.0% |
| GGCGCGAATTCCGGTGGTCT+AGG | + | chr8_1:37460876-37460895 | None:intergenic | 65.0% | |
| GGGTGGCCACATGTGAGGAC+AGG | - | chr8_1:37462600-37462619 | Msa1192140:CDS | 65.0% | |
| GGAGGGGGGTTTGGAGGGGA+AGG | + | chr8_1:37460534-37460553 | None:intergenic | 70.0% | |
| GGAGGAGGAGGGGGGTTTGG+AGG | + | chr8_1:37460540-37460559 | None:intergenic | 70.0% | |
| GTGGGAGGAGGAGGGGGGTT+TGG | + | chr8_1:37460543-37460562 | None:intergenic | 70.0% | |
| ! | GGGGGTGTAGTGGGAGGAGG+AGG | + | chr8_1:37460552-37460571 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 37460265 | 37464483 | 37460265 | ID=Msa1192140;Name=Msa1192140 |
| chr8_1 | mRNA | 37460265 | 37464483 | 37460265 | ID=Msa1192140-mRNA-1;Parent=Msa1192140;Name=Msa1192140-mRNA-1;_AED=0.07;_eAED=0.07;_QI=80|0.85|0.87|1|0.85|0.75|8|265|264 |
| chr8_1 | exon | 37460265 | 37460301 | 37460265 | ID=Msa1192140-mRNA-1:exon:12310;Parent=Msa1192140-mRNA-1 |
| chr8_1 | exon | 37460459 | 37460806 | 37460459 | ID=Msa1192140-mRNA-1:exon:12309;Parent=Msa1192140-mRNA-1 |
| chr8_1 | exon | 37461422 | 37461510 | 37461422 | ID=Msa1192140-mRNA-1:exon:12308;Parent=Msa1192140-mRNA-1 |
| chr8_1 | exon | 37461995 | 37462050 | 37461995 | ID=Msa1192140-mRNA-1:exon:12307;Parent=Msa1192140-mRNA-1 |
| chr8_1 | exon | 37462576 | 37462670 | 37462576 | ID=Msa1192140-mRNA-1:exon:12306;Parent=Msa1192140-mRNA-1 |
| chr8_1 | exon | 37463248 | 37463340 | 37463248 | ID=Msa1192140-mRNA-1:exon:12305;Parent=Msa1192140-mRNA-1 |
| chr8_1 | exon | 37463846 | 37463946 | 37463846 | ID=Msa1192140-mRNA-1:exon:12304;Parent=Msa1192140-mRNA-1 |
| chr8_1 | exon | 37464163 | 37464483 | 37464163 | ID=Msa1192140-mRNA-1:exon:12303;Parent=Msa1192140-mRNA-1 |
| chr8_1 | five_prime_UTR | 37464404 | 37464483 | 37464404 | ID=Msa1192140-mRNA-1:five_prime_utr;Parent=Msa1192140-mRNA-1 |
| chr8_1 | CDS | 37464163 | 37464403 | 37464163 | ID=Msa1192140-mRNA-1:cds;Parent=Msa1192140-mRNA-1 |
| chr8_1 | CDS | 37463846 | 37463946 | 37463846 | ID=Msa1192140-mRNA-1:cds;Parent=Msa1192140-mRNA-1 |
| chr8_1 | CDS | 37463248 | 37463340 | 37463248 | ID=Msa1192140-mRNA-1:cds;Parent=Msa1192140-mRNA-1 |
| chr8_1 | CDS | 37462576 | 37462670 | 37462576 | ID=Msa1192140-mRNA-1:cds;Parent=Msa1192140-mRNA-1 |
| chr8_1 | CDS | 37461995 | 37462050 | 37461995 | ID=Msa1192140-mRNA-1:cds;Parent=Msa1192140-mRNA-1 |
| chr8_1 | CDS | 37461422 | 37461510 | 37461422 | ID=Msa1192140-mRNA-1:cds;Parent=Msa1192140-mRNA-1 |
| chr8_1 | CDS | 37460687 | 37460806 | 37460687 | ID=Msa1192140-mRNA-1:cds;Parent=Msa1192140-mRNA-1 |
| chr8_1 | three_prime_UTR | 37460459 | 37460686 | 37460459 | ID=Msa1192140-mRNA-1:three_prime_utr;Parent=Msa1192140-mRNA-1 |
| chr8_1 | three_prime_UTR | 37460265 | 37460301 | 37460265 | ID=Msa1192140-mRNA-1:three_prime_utr;Parent=Msa1192140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
