AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1458290


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1458290 MtrunA17_Chr4g0022171 100.000 470 0 0 1 470 1 470 0.0 972
Msa1458290 MtrunA17_Chr2g0324061 80.084 477 81 6 1 470 1 470 0.0 736
Msa1458290 MtrunA17_Chr7g0249421 49.666 449 188 8 51 469 50 490 2.71e-143 419
Msa1458290 MtrunA17_Chr7g0221691 54.790 334 143 4 54 380 86 418 3.59e-130 384
Msa1458290 MtrunA17_Chr7g0243571 43.552 411 197 8 62 468 57 436 1.66e-115 347
Msa1458290 MtrunA17_Chr8g0342431 45.050 404 156 10 1 370 1 372 9.48e-107 323
Msa1458290 MtrunA17_Chr7g0272061 45.679 324 169 3 58 379 52 370 1.11e-102 311
Msa1458290 MtrunA17_Chr4g0004971 46.855 318 157 4 56 371 37 344 2.48e-102 310
Msa1458290 MtrunA17_Chr1g0192421 44.272 323 166 3 49 370 41 350 3.20e-100 304
Msa1458290 MtrunA17_Chr4g0067711 46.382 304 147 4 69 370 63 352 1.08e-99 303
Msa1458290 MtrunA17_Chr2g0295401 46.885 305 148 4 67 370 62 353 4.65e-99 301
Msa1458290 MtrunA17_Chr1g0151781 46.965 313 152 3 61 373 33 331 5.87e-90 277
Msa1458290 MtrunA17_Chr6g0486661 29.524 315 164 9 79 372 106 383 1.37e-26 114
Msa1458290 MtrunA17_Chr4g0066371 26.646 319 177 8 79 378 68 348 5.76e-26 109
Msa1458290 MtrunA17_Chr5g0396731 33.582 268 122 9 74 332 80 300 6.59e-24 102
Msa1458290 MtrunA17_Chr2g0286951 27.219 338 188 10 79 396 69 368 2.18e-23 102
Msa1458290 MtrunA17_Chr3g0136711 29.577 284 137 9 98 378 67 290 2.86e-19 88.2
Msa1458290 MtrunA17_Chr1g0212961 30.435 253 118 9 96 347 126 321 3.22e-19 89.0
Msa1458290 MtrunA17_Chr6g0483411 30.045 223 117 7 165 369 117 318 6.57e-19 87.4
Msa1458290 MtrunA17_Chr1g0150451 30.677 251 120 7 98 347 110 307 7.06e-19 87.8
Msa1458290 MtrunA17_Chr8g0389921 28.958 259 153 7 74 329 156 386 2.33e-18 87.4
Msa1458290 MtrunA17_Chr3g0135961 29.688 256 137 10 77 329 269 484 3.93e-18 87.0
Msa1458290 MtrunA17_Chr4g0070871 27.888 251 135 8 84 329 236 445 8.43e-18 85.9
Msa1458290 MtrunA17_Chr3g0112291 34.595 185 92 6 159 330 153 321 1.56e-17 84.3
Msa1458290 MtrunA17_Chr5g0435721 29.151 271 127 9 74 330 200 419 2.27e-16 81.3
Msa1458290 MtrunA17_Chr1g0150781 27.869 244 135 6 89 329 283 488 1.89e-15 79.0
Msa1458290 MtrunA17_Chr2g0317021 35.556 180 90 8 193 370 177 332 2.04e-15 77.4
Msa1458290 MtrunA17_Chr8g0360351 35.028 177 97 8 172 347 106 265 2.09e-15 76.6
Msa1458290 MtrunA17_Chr1g0175381 26.349 315 173 13 93 378 76 360 2.55e-15 77.4
Msa1458290 MtrunA17_Chr3g0089711 27.245 323 155 14 91 371 63 347 5.65e-15 76.3
Msa1458290 MtrunA17_Chr3g0089721 27.245 323 155 14 91 371 63 347 7.03e-15 76.3
Msa1458290 MtrunA17_Chr2g0299981 24.345 267 141 8 82 325 248 476 2.90e-14 75.1
Msa1458290 MtrunA17_Chr1g0194191 28.030 264 134 11 96 349 118 335 5.29e-14 73.6
Msa1458290 MtrunA17_Chr4g0050381 30.645 186 108 8 166 347 92 260 5.63e-14 72.4
Msa1458290 MtrunA17_Chr3g0136811 28.826 281 158 10 71 330 28 287 1.20e-13 72.4
Msa1458290 MtrunA17_Chr1g0158781 28.870 239 113 7 96 330 145 330 1.90e-13 71.6
Msa1458290 MtrunA17_Chr5g0407161 25.833 240 118 7 96 330 124 308 4.15e-13 70.9
Msa1458290 MtrunA17_Chr3g0126511 31.481 162 93 4 169 329 162 306 4.44e-13 70.5
Msa1458290 MtrunA17_Chr8g0371321 26.087 253 138 10 168 378 116 361 5.41e-13 70.5
Msa1458290 MtrunA17_Chr5g0430481 25.439 342 195 11 35 370 87 374 8.57e-13 69.7
Msa1458290 MtrunA17_Chr7g0256751 27.660 282 145 11 91 349 64 309 1.09e-12 69.7
Msa1458290 MtrunA17_Chr7g0250061 28.879 232 117 12 197 391 149 369 1.96e-12 68.6
Msa1458290 MtrunA17_Chr1g0150071 27.402 281 162 9 71 330 28 287 5.19e-12 67.0
Msa1458290 MtrunA17_Chr3g0089691 26.966 267 124 10 185 392 45 299 5.29e-12 66.6
Msa1458290 MtrunA17_Chr3g0144111 27.711 166 96 4 169 329 43 189 1.15e-11 65.1
Msa1458290 MtrunA17_Chr1g0171571 31.548 168 96 5 168 330 457 610 1.34e-11 67.0
Msa1458290 MtrunA17_Chr1g0207571 24.107 336 192 13 89 390 54 360 4.40e-11 64.3
Msa1458290 MtrunA17_Chr2g0295991 26.667 270 153 9 95 332 165 421 4.67e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1458290 AT4G03415.1 76.261 476 99 6 1 470 1 468 0.0 676
Msa1458290 AT4G03415.3 76.261 476 99 6 1 470 1 468 0.0 676
Msa1458290 AT4G03415.2 76.261 476 99 6 1 470 1 468 0.0 676
Msa1458290 AT1G03590.1 68.499 473 127 6 1 466 1 458 0.0 620
Msa1458290 AT1G16220.1 48.026 456 213 7 35 470 35 486 1.17e-145 426
Msa1458290 AT3G02750.2 47.400 500 214 11 1 463 1 488 3.33e-140 412
Msa1458290 AT3G02750.1 47.400 500 214 11 1 463 1 488 3.33e-140 412
Msa1458290 AT1G79630.1 48.098 447 194 8 57 470 58 499 3.89e-138 407
Msa1458290 AT1G79630.8 48.098 447 194 8 57 470 54 495 7.23e-138 406
Msa1458290 AT5G36250.1 48.252 429 169 7 51 463 52 443 3.29e-134 395
Msa1458290 AT3G02750.3 46.888 482 180 9 51 463 49 523 2.52e-132 393
Msa1458290 AT5G36250.2 46.953 443 168 8 51 463 52 457 2.47e-130 385
Msa1458290 AT1G79630.2 47.482 417 181 8 87 470 18 429 2.21e-123 367
Msa1458290 AT1G79630.7 47.482 417 181 8 87 470 18 429 2.21e-123 367
Msa1458290 AT1G79630.6 52.427 309 137 3 167 470 86 389 8.14e-110 330
Msa1458290 AT1G79630.3 52.427 309 137 3 167 470 86 389 8.14e-110 330
Msa1458290 AT1G79630.4 52.427 309 137 3 167 470 86 389 8.14e-110 330
Msa1458290 AT1G79630.5 52.427 309 137 3 167 470 86 389 8.14e-110 330
Msa1458290 AT5G01700.2 48.094 341 161 4 58 397 39 364 7.22e-104 315
Msa1458290 AT5G01700.1 49.235 327 150 4 72 397 4 315 4.83e-103 311
Msa1458290 AT5G27930.1 43.658 339 178 3 32 369 27 353 3.72e-101 308
Msa1458290 AT5G27930.2 43.658 339 178 3 32 369 27 353 3.72e-101 308
Msa1458290 AT3G05640.2 45.541 314 152 3 58 370 54 349 3.87e-101 307
Msa1458290 AT3G05640.1 45.541 314 152 3 58 370 54 349 3.87e-101 307
Msa1458290 AT3G05640.3 45.541 314 152 3 58 370 54 349 3.87e-101 307
Msa1458290 AT5G36250.3 52.297 283 122 4 51 320 52 334 4.86e-101 306
Msa1458290 AT3G16800.2 42.208 308 156 4 65 370 61 348 5.11e-84 263
Msa1458290 AT3G16800.1 42.208 308 156 4 65 370 61 348 5.11e-84 263
Msa1458290 AT3G16800.3 42.208 308 156 4 65 370 61 348 5.11e-84 263
Msa1458290 AT5G27930.3 44.788 259 130 3 60 317 55 301 3.12e-80 252
Msa1458290 AT5G26010.1 44.702 302 142 5 73 373 50 327 1.12e-79 251
Msa1458290 AT4G32950.1 39.118 363 171 7 17 377 9 323 5.51e-78 246
Msa1458290 AT3G16800.4 41.026 273 140 3 99 370 1 253 1.32e-71 228
Msa1458290 AT3G16800.6 41.026 273 140 3 99 370 1 253 1.32e-71 228
Msa1458290 AT4G32950.2 38.284 303 137 7 17 317 9 263 5.39e-58 193
Msa1458290 AT3G16800.5 35.754 179 93 4 65 241 61 219 1.00e-32 124
Msa1458290 AT2G20050.1 29.430 316 166 9 79 375 125 402 4.77e-29 121
Msa1458290 AT2G20050.2 29.430 316 166 9 79 375 125 402 5.03e-29 121
Msa1458290 AT3G06270.1 28.041 296 151 9 79 353 70 324 1.27e-22 99.4
Msa1458290 AT3G11410.1 33.333 276 108 11 74 324 112 336 1.74e-22 99.8
Msa1458290 AT5G10740.1 35.417 192 102 5 161 349 93 265 1.87e-20 92.8
Msa1458290 AT5G10740.2 35.417 192 102 5 161 349 93 265 1.87e-20 92.8
Msa1458290 AT5G59220.1 31.541 279 114 11 74 330 119 342 2.72e-20 93.2
Msa1458290 AT5G24940.1 34.737 190 106 5 161 349 93 265 3.77e-20 93.2
Msa1458290 AT1G07430.1 28.772 285 133 9 74 338 128 362 4.51e-20 92.8
Msa1458290 AT4G28400.3 37.778 180 94 9 169 347 82 244 1.61e-19 88.6
Msa1458290 AT2G34740.1 36.667 210 104 10 166 370 150 335 2.66e-19 89.4
Msa1458290 AT4G28400.1 37.778 180 94 9 169 347 104 266 3.13e-19 88.2
Msa1458290 AT1G72770.4 33.603 247 113 11 96 329 238 446 9.73e-19 89.4
Msa1458290 AT1G72770.1 33.603 247 113 11 96 329 238 446 9.73e-19 89.4
Msa1458290 AT1G72770.3 33.603 247 113 11 96 329 238 446 9.73e-19 89.4
Msa1458290 AT4G31750.2 33.010 206 111 7 169 371 101 282 1.54e-18 86.7
Msa1458290 AT4G31750.1 32.547 212 120 6 161 371 93 282 1.57e-18 86.7
Msa1458290 AT4G31750.3 32.547 212 120 6 161 371 93 282 1.57e-18 86.7
Msa1458290 AT1G78200.5 34.239 184 106 5 167 349 54 223 9.21e-18 82.8
Msa1458290 AT1G78200.4 34.239 184 106 5 167 349 54 223 9.21e-18 82.8
Msa1458290 AT1G78200.1 34.239 184 106 5 167 349 99 268 1.07e-17 83.6
Msa1458290 AT1G78200.3 34.239 184 106 5 167 349 99 268 1.07e-17 83.6
Msa1458290 AT1G78200.2 34.239 184 106 5 167 349 99 268 1.07e-17 83.6
Msa1458290 AT1G43900.1 30.400 250 119 7 96 344 154 349 2.90e-16 80.9
Msa1458290 AT5G57050.1 29.487 234 123 7 96 329 160 351 4.22e-16 80.5
Msa1458290 AT5G57050.2 29.487 234 123 7 96 329 120 311 5.91e-16 79.7
Msa1458290 AT2G20630.1 36.066 183 99 9 167 348 98 263 6.23e-16 78.6
Msa1458290 AT4G26080.1 30.769 234 118 9 96 329 172 361 8.02e-16 79.7
Msa1458290 AT2G20630.2 38.217 157 80 7 193 348 123 263 1.02e-15 78.2
Msa1458290 AT1G34750.2 31.606 193 112 8 159 349 93 267 1.23e-15 77.8
Msa1458290 AT1G34750.1 31.606 193 112 8 159 349 93 267 1.23e-15 77.8
Msa1458290 AT1G34750.3 31.606 193 112 8 159 349 93 267 1.23e-15 77.8
Msa1458290 AT5G53140.1 28.287 251 126 7 98 347 134 331 2.13e-15 78.6
Msa1458290 AT5G53140.2 28.287 251 126 7 98 347 134 331 2.13e-15 78.6
Msa1458290 AT1G17550.1 30.204 245 117 10 96 325 237 442 7.95e-15 77.0
Msa1458290 AT1G17550.2 30.204 245 117 10 96 325 237 442 7.95e-15 77.0
Msa1458290 AT5G51760.2 31.553 206 113 6 157 350 153 342 4.12e-14 74.3
Msa1458290 AT5G51760.1 31.553 206 113 6 157 350 183 372 4.51e-14 74.3
Msa1458290 AT5G06750.3 25.559 313 172 12 94 374 80 363 5.27e-14 73.9
Msa1458290 AT5G06750.1 25.559 313 172 12 94 374 80 363 5.27e-14 73.9
Msa1458290 AT3G15260.2 33.333 186 103 8 166 347 104 272 2.12e-13 71.2
Msa1458290 AT3G15260.1 33.333 186 103 8 166 347 104 272 2.12e-13 71.2
Msa1458290 AT4G28400.2 37.908 153 77 9 169 320 104 239 2.52e-13 70.1
Msa1458290 AT1G22280.3 31.863 204 115 8 167 369 106 286 3.23e-13 70.5
Msa1458290 AT1G22280.1 31.863 204 115 8 167 369 100 280 3.50e-13 70.5
Msa1458290 AT1G18030.1 25.792 221 125 6 167 369 149 348 9.89e-13 69.7
Msa1458290 AT3G62260.3 28.409 264 130 9 96 347 27 243 5.60e-12 67.0
Msa1458290 AT3G62260.2 28.309 272 132 10 90 347 111 333 6.98e-12 67.4
Msa1458290 AT3G62260.1 28.309 272 132 10 90 347 110 332 7.46e-12 67.4
Msa1458290 AT5G06750.2 25.984 254 154 9 153 374 30 281 7.98e-12 66.6
Msa1458290 AT1G34750.4 31.792 173 96 9 159 329 93 245 1.31e-11 65.1
Msa1458290 AT1G07160.1 28.502 207 130 5 164 370 188 376 1.47e-11 66.2
Msa1458290 AT1G48040.1 27.344 256 128 10 96 341 116 323 2.17e-11 65.9
Msa1458290 AT3G17250.1 24.911 281 158 10 96 368 158 393 2.32e-11 65.9
Msa1458290 AT3G51470.1 25.735 272 134 10 70 330 76 290 3.14e-11 65.1
Msa1458290 AT2G40860.2 28.899 218 128 7 141 350 438 636 3.15e-11 66.2
Msa1458290 AT2G40860.4 27.419 248 145 8 141 380 340 560 3.50e-11 65.9
Msa1458290 AT2G40860.1 27.419 248 145 8 141 380 438 658 4.26e-11 65.9
Msa1458290 AT3G51470.2 25.556 270 137 9 70 330 32 246 4.57e-11 64.3

Find 135 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTAAAATTGCTTTCATTT+TGG 0.208933 tig0039517:+9768 Msa1458290:CDS
AATCTCTTCATGGGATATAT+TGG 0.215176 tig0039517:+10109 Msa1458290:CDS
CATGGAGTCATTGCTGTCTT+TGG 0.215963 tig0039517:-10155 Msa1458290:intergenic
GTTGTAAAGTAACTTATATT+TGG 0.272280 tig0039517:+9113 Msa1458290:five_prime_UTR
ACCATTCAGAGCAACCATTC+TGG 0.300542 tig0039517:+12191 Msa1458290:CDS
ATCTCTTCATGGGATATATT+GGG 0.314474 tig0039517:+10110 Msa1458290:CDS
AAACTCGAAGTGGTTTGATT+TGG 0.316314 tig0039517:+12576 Msa1458290:three_prime_UTR
TCCAGAATACACACATTATA+TGG 0.326389 tig0039517:-9252 Msa1458290:intergenic
AACTCGAAGTGGTTTGATTT+GGG 0.333922 tig0039517:+12577 Msa1458290:three_prime_UTR
CTACAGAAGCAGTCTAGATT+TGG 0.335148 tig0039517:-9965 Msa1458290:intergenic
TGATTTGGGTAATTAGTTTA+CGG 0.341139 tig0039517:+12591 Msa1458290:three_prime_UTR
CCAGGGTTCAAATCTCTTCA+TGG 0.346038 tig0039517:+10099 Msa1458290:intron
AGAATCAGATTATGATGAAC+AGG 0.348246 tig0039517:+12154 Msa1458290:CDS
AATGACCCACTTGGCAAATC+AGG 0.352742 tig0039517:-10208 Msa1458290:intergenic
ATCATCAGCAGCAAGGATTC+TGG 0.370635 tig0039517:+12034 Msa1458290:CDS
ACCATATAATGTGTGTATTC+TGG 0.372095 tig0039517:+9251 Msa1458290:five_prime_UTR
TGCTAGGTAAGGATGATAAT+TGG 0.373974 tig0039517:-9434 Msa1458290:intergenic
TTAGCAATGGCTAGGGCGTT+TGG 0.378040 tig0039517:+10410 Msa1458290:CDS
CTTGAATCTGAGTGTTTACC+AGG 0.382862 tig0039517:-12476 Msa1458290:intergenic
TTCATTGTTCTTGCGTCAGA+TGG 0.392602 tig0039517:+10509 Msa1458290:CDS
GATTTCTGCTTGAAGGAGTA+TGG 0.392742 tig0039517:+10434 Msa1458290:CDS
AGATCAAAACTGGTTAGGTT+TGG 0.408331 tig0039517:+12349 Msa1458290:CDS
GATCTTTCTTCAGAAAATCT+AGG 0.410352 tig0039517:-12407 Msa1458290:intergenic
TGTCCATCATCTGATTCAAC+TGG 0.411905 tig0039517:-12218 Msa1458290:intergenic
CTTCAGAAAATCTAGGAAGT+TGG 0.412133 tig0039517:-12400 Msa1458290:intergenic
GTTTGGAGATTTCTGCTTGA+AGG 0.422853 tig0039517:+10427 Msa1458290:CDS
CTCTTGAATCGAAACAAAAT+AGG 0.424477 tig0039517:+9795 Msa1458290:CDS
AGCAGCCGGTGAGAAAATTC+AGG 0.426271 tig0039517:-10470 Msa1458290:intergenic
TTTCACTAATGGAAAGAGTC+GGG 0.431687 tig0039517:+9461 Msa1458290:CDS
CCATTCAGAGCAACCATTCT+GGG 0.439997 tig0039517:+12192 Msa1458290:CDS
GGTGAAGATCAAAACTGGTT+AGG 0.440345 tig0039517:+12344 Msa1458290:CDS
CCCAGAATGGTTGCTCTGAA+TGG 0.442295 tig0039517:-12192 Msa1458290:intergenic
ACATTTATGTCTTGATTTAG+TGG 0.442410 tig0039517:+12676 Msa1458290:three_prime_UTR
TGGGGATTCTCGAGCAATCA+TGG 0.443019 tig0039517:+10129 Msa1458290:CDS
ATTCAACTGGATTCCCAGAA+TGG 0.448330 tig0039517:-12205 Msa1458290:intergenic
GGGTCGCAAGGGAATTAATC+AGG 0.449317 tig0039517:+9506 Msa1458290:CDS
TGTGGTGTCTTTGATGGTCA+TGG 0.456999 tig0039517:+9701 Msa1458290:CDS
CGTGAGATCTGTAGTGGAAA+GGG 0.461070 tig0039517:+9210 Msa1458290:five_prime_UTR
TGCTTCGAAATTTGTTTCTG+TGG 0.464700 tig0039517:+9363 Msa1458290:CDS
TTCGTGCATATTTACACAGC+AGG 0.465091 tig0039517:+9485 Msa1458290:CDS
ACCACAAAATATCGTATCTT+CGG 0.468013 tig0039517:-9684 Msa1458290:intergenic
CATCAGGTGAAGATCAAAAC+TGG 0.468748 tig0039517:+12339 Msa1458290:CDS
CATGTGCTCCAGACACTGTA+AGG 0.473076 tig0039517:+12772 Msa1458290:three_prime_UTR
GTTGAAGATGAAGCAGCATC+AGG 0.478334 tig0039517:+12323 Msa1458290:CDS
GTAAAGTTCCTTCTCAAAGA+TGG 0.483162 tig0039517:-12251 Msa1458290:intergenic
ATTGAACATGTTAGATCCGC+GGG 0.484081 tig0039517:-12621 Msa1458290:intergenic
TCTGGTAAATTCAGCTGCTC+GGG 0.485878 tig0039517:+12052 Msa1458290:CDS
AGCCACACCCTAGGAACTTC+AGG 0.487256 tig0039517:-10365 Msa1458290:intergenic
TTCTGGTAAATTCAGCTGCT+CGG 0.491412 tig0039517:+12051 Msa1458290:CDS
TTCAAGTGCTAAAATAGATT+AGG 0.493612 tig0039517:+12712 Msa1458290:three_prime_UTR
TAAATTCAGCTGCTCGGGAA+TGG 0.495611 tig0039517:+12057 Msa1458290:CDS
AACCCTGGTGCGTCATCAAA+AGG 0.497791 tig0039517:-10389 Msa1458290:intergenic
AAGATGAGCCTGAAGTTCCT+AGG 0.498159 tig0039517:+10357 Msa1458290:CDS
AATTATCATCCTTACCTAGC+AGG 0.505801 tig0039517:+9436 Msa1458290:CDS
TTCTCAGACTCACCACAGTC+TGG 0.510311 tig0039517:-9851 Msa1458290:intergenic
ATCTGTGACTGTAGTAAAGC+AGG 0.511946 tig0039517:+9997 Msa1458290:CDS
CAAAACTGGTTAGGTTTGGA+AGG 0.513854 tig0039517:+12353 Msa1458290:CDS
TTATTGCTCTAGCTTTGTAA+AGG 0.514552 tig0039517:+8262 Msa1458290:five_prime_UTR
CAGGGTTCAAATCTCTTCAT+GGG 0.514984 tig0039517:+10100 Msa1458290:intron
ATCGACAGACACTGCTCCGT+TGG 0.516366 tig0039517:-12300 Msa1458290:intergenic
CACCAGGGTTAGCAATGGCT+AGG 0.517626 tig0039517:+10402 Msa1458290:CDS
AAACCACTTCGAGTTTGTCT+AGG 0.521629 tig0039517:-12569 Msa1458290:intergenic
AAACAAATTTCGAAGCAAGA+TGG 0.526661 tig0039517:-9357 Msa1458290:intergenic
GTCGAAGTACTTGTAGCAGC+GGG 0.528583 tig0039517:+9313 Msa1458290:CDS
AGCCTGAAGTTCCTAGGGTG+TGG 0.534994 tig0039517:+10363 Msa1458290:CDS
ATTTACACAGCAGGGTCGCA+AGG 0.535677 tig0039517:+9494 Msa1458290:CDS
TCATTGTTCTTGCGTCAGAT+GGG 0.536426 tig0039517:+10510 Msa1458290:CDS
AGTGAAAATCCTGCTAGGTA+AGG 0.538054 tig0039517:-9445 Msa1458290:intergenic
CTTGAATTTCTTGCTTCATG+AGG 0.542683 tig0039517:+12435 Msa1458290:exon
CAGACAAAACTTGCTTCAAA+CGG 0.544074 tig0039517:+9819 Msa1458290:CDS
AAATACTTCTTCAAAATCCG+TGG 0.545645 tig0039517:-9078 Msa1458290:intergenic
TGTGGAGTTCAGTTTATCCT+CGG 0.553472 tig0039517:-9885 Msa1458290:intergenic
ACTTGTAGCAGCGGGAGCAA+TGG 0.557749 tig0039517:+9321 Msa1458290:CDS
GATCTCTGTCTGTGAGCAGC+CGG 0.558467 tig0039517:-10484 Msa1458290:intergenic
CAAAGACAGCAATGACTCCA+TGG 0.558918 tig0039517:+10156 Msa1458290:CDS
AATCAAGCAGTGCAAGGGTA+GGG 0.560069 tig0039517:+10322 Msa1458290:CDS
AATGAAGTAATGCTTGCTGC+AGG 0.560412 tig0039517:-8232 Msa1458290:intergenic
AATCTAGACTGCTTCTGTAG+TGG 0.563578 tig0039517:+9968 Msa1458290:CDS
ATCTTGTTGCGCGTAAAGTG+AGG 0.564465 tig0039517:+9735 Msa1458290:CDS
GGGAATTAATCAGGATGCCA+TGG 0.565143 tig0039517:+9515 Msa1458290:CDS
AGACCATGGACAAAGAGCTT+AGG 0.566360 tig0039517:+9936 Msa1458290:CDS
AATCCAGTTGAATCAGATGA+TGG 0.567117 tig0039517:+12215 Msa1458290:CDS
TCTCTTCATGGGATATATTG+GGG 0.568937 tig0039517:+10111 Msa1458290:CDS
ACCAGGGTTAGCAATGGCTA+GGG 0.571256 tig0039517:+10403 Msa1458290:CDS
ACGTGAGATCTGTAGTGGAA+AGG 0.572980 tig0039517:+9209 Msa1458290:five_prime_UTR
GGAAAGAATCAAGCAGTGCA+AGG 0.573684 tig0039517:+10316 Msa1458290:CDS
AAAACTGGTTAGGTTTGGAA+GGG 0.578580 tig0039517:+12354 Msa1458290:CDS
AATTGAACATGTTAGATCCG+CGG 0.578821 tig0039517:-12622 Msa1458290:intergenic
AGATGAGCCTGAAGTTCCTA+GGG 0.581249 tig0039517:+10358 Msa1458290:CDS
AGACCTAAGCTCTTTGTCCA+TGG 0.584175 tig0039517:-9939 Msa1458290:intergenic
TAACTGTTTATTGTAGTACC+TGG 0.586555 tig0039517:+12458 Msa1458290:three_prime_UTR
AGTCGAAGTACTTGTAGCAG+CGG 0.586885 tig0039517:+9312 Msa1458290:CDS
GGGGATTCTCGAGCAATCAT+GGG 0.587725 tig0039517:+10130 Msa1458290:CDS
CCATTAGTGAAAATCCTGCT+AGG 0.589167 tig0039517:-9450 Msa1458290:intergenic
ATCAGGATGCCATGGTTGTG+TGG 0.596198 tig0039517:+9523 Msa1458290:CDS
CATTGTTCTTGCGTCAGATG+GGG 0.596634 tig0039517:+10511 Msa1458290:CDS
GAATCAAGCAGTGCAAGGGT+AGG 0.597342 tig0039517:+10321 Msa1458290:CDS
GAAAGAATCAAGCAGTGCAA+GGG 0.598000 tig0039517:+10317 Msa1458290:CDS
GGTGGTTGAGATAGTATCAT+CGG 0.598952 tig0039517:+12001 Msa1458290:CDS
AAACCTAGACAAACTCGAAG+TGG 0.598952 tig0039517:+12566 Msa1458290:three_prime_UTR
AATCGGAGCCATCTTTGAGA+AGG 0.600237 tig0039517:+12243 Msa1458290:CDS
CTTGCTGCTGATGATCGTGT+TGG 0.601429 tig0039517:-12026 Msa1458290:intergenic
TCCGTTCAAATAGCGTCCCA+CGG 0.601606 tig0039517:+9061 Msa1458290:five_prime_UTR
TCAAAAGGCAGCCACACCCT+AGG 0.606675 tig0039517:-10374 Msa1458290:intergenic
GCCCTAGCCATTGCTAACCC+TGG 0.606931 tig0039517:-10404 Msa1458290:intergenic
AAACTGGTTAGGTTTGGAAG+GGG 0.609381 tig0039517:+12355 Msa1458290:CDS
AGGATAAACTGAACTCCACA+TGG 0.618329 tig0039517:+9888 Msa1458290:CDS
TTCACTAATGGAAAGAGTCG+GGG 0.619236 tig0039517:+9462 Msa1458290:CDS
TCTGTGGACAAAAGAGAGCA+AGG 0.624356 tig0039517:+9379 Msa1458290:CDS
TTTACACAGCAGGGTCGCAA+GGG 0.624371 tig0039517:+9495 Msa1458290:CDS
TGAGAAGGATTGTTCTGCCG+AGG 0.624451 tig0039517:+9868 Msa1458290:CDS
TCTTGTTGCGCGTAAAGTGA+GGG 0.625856 tig0039517:+9736 Msa1458290:CDS
TATGAAAGCTTCTCTCCATG+TGG 0.626211 tig0039517:-9903 Msa1458290:intergenic
AGTCAACTGAATTGCCACCA+TGG 0.629372 tig0039517:-10173 Msa1458290:intergenic
TCCGTGGGACGCTATTTGAA+CGG 0.632474 tig0039517:-9062 Msa1458290:intergenic
TCGTGCATATTTACACAGCA+GGG 0.634119 tig0039517:+9486 Msa1458290:CDS
ACTGGTGAATTAGGCTACCA+AGG 0.634135 tig0039517:-12540 Msa1458290:intergenic
TCAGGATGCCATGGTTGTGT+GGG 0.634495 tig0039517:+9524 Msa1458290:CDS
AATACTTCTTCAAAATCCGT+GGG 0.635830 tig0039517:-9077 Msa1458290:intergenic
TTTGATGGTCATGGTCCACA+AGG 0.637535 tig0039517:+9710 Msa1458290:CDS
AGACTGTGGTGAGTCTGAGA+AGG 0.641591 tig0039517:+9853 Msa1458290:CDS
TCAGAAGAAAATGAGACCAA+CGG 0.642277 tig0039517:+12284 Msa1458290:CDS
TTGGTTGGGAATAGGAGAAG+CGG 0.643491 tig0039517:+10295 Msa1458290:intron
ACTTACTTCCCACACAACCA+TGG 0.645722 tig0039517:-9532 Msa1458290:intergenic
CATAAAAGCATACAAGACCA+TGG 0.649143 tig0039517:+9922 Msa1458290:CDS
TGCGAACGTGAGATCTGTAG+TGG 0.658028 tig0039517:+9204 Msa1458290:five_prime_UTR
AGTTTACGGTTTCAAACCCG+CGG 0.666192 tig0039517:+12605 Msa1458290:three_prime_UTR
GAATCAGATTATGATGAACA+GGG 0.666739 tig0039517:+12155 Msa1458290:CDS
AGAATACACACATTATATGG+TGG 0.669023 tig0039517:-9249 Msa1458290:intergenic
TGACGCACCAGGGTTAGCAA+TGG 0.672958 tig0039517:+10397 Msa1458290:CDS
CAACACGATCATCAGCAGCA+AGG 0.675811 tig0039517:+12027 Msa1458290:CDS
ATGAAGTAATGCTTGCTGCA+GGG 0.684169 tig0039517:-8231 Msa1458290:intergenic
CGCGCAACAAGATGACCTTG+TGG 0.685405 tig0039517:-9725 Msa1458290:intergenic
CGGAACATAACACCAGACTG+TGG 0.709411 tig0039517:+9839 Msa1458290:CDS
AGACAGCAATGACTCCATGG+TGG 0.756556 tig0039517:+10159 Msa1458290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAAGTTTATTTTTAGTTT+TGG + tig0039517:8393-8412 Msa1458290:intron 10.0%
!!! TAAAGTTTATTTTTAGTTTT+GGG + tig0039517:8394-8413 Msa1458290:intron 10.0%
!!! TTTTCTATTTTTTATTTTTC+TGG + tig0039517:10586-10605 Msa1458290:intron 10.0%
!! CAAATTATTTAAAAAATAGA+TGG - tig0039517:11173-11192 Msa1458290:intergenic 10.0%
!!! ATTTTTTTTTTTGGTTTTTT+TGG + tig0039517:12642-12661 Msa1458290:three_prime_UTR 10.0%
!! AATGAAAATGAAAATTTCAA+TGG + tig0039517:8290-8309 Msa1458290:intron 15.0%
!!! AAAGTTTATTTTTAGTTTTG+GGG + tig0039517:8395-8414 Msa1458290:intron 15.0%
!! ATAAATAAATATCAAAGCAA+AGG - tig0039517:8675-8694 Msa1458290:intergenic 15.0%
!! TTATTTATTTGAGCTATTTA+AGG + tig0039517:8687-8706 Msa1458290:intron 15.0%
!! ATTAATATCATGTTTCAAAT+GGG - tig0039517:8757-8776 Msa1458290:intergenic 15.0%
!! TATTAATATCATGTTTCAAA+TGG - tig0039517:8758-8777 Msa1458290:intergenic 15.0%
!!! ATTTGAAACATGATATTAAT+AGG + tig0039517:8757-8776 Msa1458290:intron 15.0%
!! GATTGTATATTAACTATTAT+TGG + tig0039517:9002-9021 Msa1458290:intron 15.0%
!!! TCTTTTTTTAAGTTATATGA+GGG + tig0039517:9597-9616 Msa1458290:intron 15.0%
!! CAAAAATACAGATAATAATT+AGG - tig0039517:9651-9670 Msa1458290:intergenic 15.0%
!!! ATTATTATCTGTATTTTTGT+AGG + tig0039517:9652-9671 Msa1458290:intron 15.0%
!! GAAATTAAGAAAAACATAAA+AGG - tig0039517:10071-10090 Msa1458290:intergenic 15.0%
!! TATACTAAAAACTATGATAA+GGG - tig0039517:11893-11912 Msa1458290:intergenic 15.0%
!! TTATACTAAAAACTATGATA+AGG - tig0039517:11894-11913 Msa1458290:intergenic 15.0%
!!! ACATGTTCAATTTTTTTTTT+TGG + tig0039517:12633-12652 Msa1458290:three_prime_UTR 15.0%
!!! AGGATCTATTTTTATTGAAA+AGG + tig0039517:8707-8726 Msa1458290:intron 20.0%
!! TAAAAACTAAACCAAAACAA+AGG - tig0039517:8817-8836 Msa1458290:intergenic 20.0%
!!! TTTATTTTACATTTGGCAAA+TGG + tig0039517:8967-8986 Msa1458290:intron 20.0%
!! GTTGTAAAGTAACTTATATT+TGG + tig0039517:9113-9132 Msa1458290:five_prime_UTR 20.0%
!! ATAACTTAAAAAAAGAGTCA+TGG - tig0039517:9593-9612 Msa1458290:intergenic 20.0%
!!! CTCTTTTTTTAAGTTATATG+AGG + tig0039517:9596-9615 Msa1458290:intron 20.0%
!! TTTCTAACTTAATTCCAATT+TGG + tig0039517:10276-10295 Msa1458290:intron 20.0%
!!! ATGGTAAGATTATTTTTTCA+TGG - tig0039517:10644-10663 Msa1458290:intergenic 20.0%
!! ATGTTAATAGTAATGAATTG+TGG + tig0039517:10710-10729 Msa1458290:intron 20.0%
!! GATTAAATAGTACAAAACAT+TGG + tig0039517:11257-11276 Msa1458290:intron 20.0%
!! CAAAACATTGGAAAAAAATT+CGG + tig0039517:11269-11288 Msa1458290:intron 20.0%
!! AAATCATATAAATTCGACTT+AGG - tig0039517:11519-11538 Msa1458290:intergenic 20.0%
!!! AATTTGTAAATAACTTGTGT+AGG + tig0039517:11853-11872 Msa1458290:intron 20.0%
!!! GATTTTTTTTTTTGTTGAAG+TGG + tig0039517:12502-12521 Msa1458290:three_prime_UTR 20.0%
! ACAAATAAACAAGAAGAAGA+AGG - tig0039517:8369-8388 Msa1458290:intergenic 25.0%
! AACATGATATTAATAGGACA+TGG + tig0039517:8763-8782 Msa1458290:intron 25.0%
! TATATTCTTTCTTCACATGT+TGG + tig0039517:8913-8932 Msa1458290:intron 25.0%
! ATATTCTTTCTTCACATGTT+GGG + tig0039517:8914-8933 Msa1458290:intron 25.0%
!! TTGGACTTAAAGAGAATTTT+TGG + tig0039517:9132-9151 Msa1458290:five_prime_UTR 25.0%
!! TCTGGAACTGAAAAAAAAAA+TGG + tig0039517:9269-9288 Msa1458290:exon 25.0%
! CTGGAACTGAAAAAAAAAAT+GGG + tig0039517:9270-9289 Msa1458290:exon 25.0%
! TATGTTCATGTTCACTTTAT+TGG + tig0039517:9554-9573 Msa1458290:intron 25.0%
!! CAAAATGAAAGCAATTTTAC+TGG - tig0039517:9770-9789 Msa1458290:intergenic 25.0%
!! CAGTAAAATTGCTTTCATTT+TGG + tig0039517:9768-9787 Msa1458290:CDS 25.0%
! TCTTAATTTCTTAACTTACC+AGG + tig0039517:10081-10100 Msa1458290:intron 25.0%
! CTTAATTTCTTAACTTACCA+GGG + tig0039517:10082-10101 Msa1458290:intron 25.0%
! CGTCAGAGAATAAATAATAT+TGG - tig0039517:10237-10256 Msa1458290:intergenic 25.0%
! ATTGGAATTAAGTTAGAAAC+AGG - tig0039517:10275-10294 Msa1458290:intergenic 25.0%
! TAACTTAATTCCAATTTGGT+TGG + tig0039517:10280-10299 Msa1458290:intron 25.0%
! AACTTAATTCCAATTTGGTT+GGG + tig0039517:10281-10300 Msa1458290:intron 25.0%
!!! TTTATTTTTCTGGTGTGAAT+CGG + tig0039517:10596-10615 Msa1458290:intron 25.0%
!!! GAAACAAGTTGATTTTCATA+GGG - tig0039517:10962-10981 Msa1458290:intergenic 25.0%
!!! AGAAACAAGTTGATTTTCAT+AGG - tig0039517:10963-10982 Msa1458290:intergenic 25.0%
!! TATGAAAATCAACTTGTTTC+TGG + tig0039517:10962-10981 Msa1458290:intron 25.0%
! AAATAACAACCAATCATAGA+AGG + tig0039517:11062-11081 Msa1458290:intron 25.0%
! AATAACAACCAATCATAGAA+GGG + tig0039517:11063-11082 Msa1458290:intron 25.0%
!!! TGTTTTAAGCATTAGCAAAT+AGG + tig0039517:11140-11159 Msa1458290:intron 25.0%
!! TGTTTTGTACTATTTAATCC+AGG - tig0039517:11256-11275 Msa1458290:intergenic 25.0%
!!! TAATGCTTTTGGTTCTAATA+TGG + tig0039517:11299-11318 Msa1458290:intron 25.0%
! GTTATCAAGTAATTTAGACT+CGG + tig0039517:11373-11392 Msa1458290:intron 25.0%
! TCCATATTTCATATATTTGC+AGG - tig0039517:11414-11433 Msa1458290:intergenic 25.0%
!!! CTTATTTTTGGATGGTAAAA+TGG + tig0039517:12127-12146 Msa1458290:CDS 25.0%
!! TGATTTGGGTAATTAGTTTA+CGG + tig0039517:12591-12610 Msa1458290:three_prime_UTR 25.0%
! ACATTTATGTCTTGATTTAG+TGG + tig0039517:12676-12695 Msa1458290:three_prime_UTR 25.0%
! TTCAAGTGCTAAAATAGATT+AGG + tig0039517:12712-12731 Msa1458290:three_prime_UTR 25.0%
!! TTATTGCTCTAGCTTTGTAA+AGG + tig0039517:8262-8281 Msa1458290:five_prime_UTR 30.0%
! TTTGGGGTTGTTTAGAATTT+AGG + tig0039517:8411-8430 Msa1458290:intron 30.0%
!!! TTTATTTTTTGTTTACCCCC+CGG + tig0039517:8503-8522 Msa1458290:intron 30.0%
AATACTTCTTCAAAATCCGT+GGG - tig0039517:9080-9099 Msa1458290:intergenic 30.0%
AAATACTTCTTCAAAATCCG+TGG - tig0039517:9081-9100 Msa1458290:intergenic 30.0%
AGAATACACACATTATATGG+TGG - tig0039517:9252-9271 Msa1458290:intergenic 30.0%
ACCATATAATGTGTGTATTC+TGG + tig0039517:9251-9270 Msa1458290:five_prime_UTR 30.0%
TCCAGAATACACACATTATA+TGG - tig0039517:9255-9274 Msa1458290:intergenic 30.0%
AAACAAATTTCGAAGCAAGA+TGG - tig0039517:9360-9379 Msa1458290:intergenic 30.0%
! TTTTCACTAATGGAAAGAGT+CGG + tig0039517:9460-9479 Msa1458290:CDS 30.0%
ACCACAAAATATCGTATCTT+CGG - tig0039517:9687-9706 Msa1458290:intergenic 30.0%
! ATATTTTGTGGTGTCTTTGA+TGG + tig0039517:9695-9714 Msa1458290:CDS 30.0%
CTCTTGAATCGAAACAAAAT+AGG + tig0039517:9795-9814 Msa1458290:CDS 30.0%
AATCTCTTCATGGGATATAT+TGG + tig0039517:10109-10128 Msa1458290:CDS 30.0%
ATCTCTTCATGGGATATATT+GGG + tig0039517:10110-10129 Msa1458290:CDS 30.0%
AAGTTATTCTACTCAATGGT+TGG - tig0039517:10789-10808 Msa1458290:intergenic 30.0%
GAACAAGTTATTCTACTCAA+TGG - tig0039517:10793-10812 Msa1458290:intergenic 30.0%
! GTATCTGATTTTCAATGAGT+GGG + tig0039517:11039-11058 Msa1458290:intron 30.0%
!!! ATCAGAATTTTCAAGTAACC+TGG + tig0039517:11235-11254 Msa1458290:intron 30.0%
!!! TTTTGGTTCTAATATGGACT+CGG + tig0039517:11305-11324 Msa1458290:intron 30.0%
! GAAAGGAATTAGACTTTTCA+AGG + tig0039517:11329-11348 Msa1458290:intron 30.0%
GCCTGCAAATATATGAAATA+TGG + tig0039517:11410-11429 Msa1458290:intron 30.0%
!! TGTGTCTAACGTTTTTGATT+TGG + tig0039517:11653-11672 Msa1458290:intron 30.0%
!!! GTGTCTAACGTTTTTGATTT+GGG + tig0039517:11654-11673 Msa1458290:intron 30.0%
! GATTCTCTTGGTATTTTTCT+AGG + tig0039517:11953-11972 Msa1458290:intron 30.0%
! TCTTGGTATTTTTCTAGGTT+TGG + tig0039517:11958-11977 Msa1458290:intron 30.0%
! CTTGGTATTTTTCTAGGTTT+GGG + tig0039517:11959-11978 Msa1458290:intron 30.0%
AGAATCAGATTATGATGAAC+AGG + tig0039517:12154-12173 Msa1458290:CDS 30.0%
GAATCAGATTATGATGAACA+GGG + tig0039517:12155-12174 Msa1458290:CDS 30.0%
!! ATCAGATGATGGACAAAAAT+CGG + tig0039517:12226-12245 Msa1458290:CDS 30.0%
GATCTTTCTTCAGAAAATCT+AGG - tig0039517:12410-12429 Msa1458290:intergenic 30.0%
TAACTGTTTATTGTAGTACC+TGG + tig0039517:12458-12477 Msa1458290:three_prime_UTR 30.0%
!!! TTTGGTTTTTTTGGTTATGC+TGG + tig0039517:12651-12670 Msa1458290:three_prime_UTR 30.0%
! TCTTGATTTAGTGGTGTTTT+TGG + tig0039517:12685-12704 Msa1458290:three_prime_UTR 30.0%
AAGAAGAAGAAGGAGAAAAG+AGG - tig0039517:8359-8378 Msa1458290:intergenic 35.0%
! TAGTAATCTGGAATTCGGTT+AGG + tig0039517:8526-8545 Msa1458290:intron 35.0%
TGAACAATAATGTTCCACTG+AGG + tig0039517:8563-8582 Msa1458290:intron 35.0%
!! TCTCTTTCATGCCTTTGTTT+TGG + tig0039517:8803-8822 Msa1458290:intron 35.0%
!! TGCTTCGAAATTTGTTTCTG+TGG + tig0039517:9363-9382 Msa1458290:CDS 35.0%
TGCTAGGTAAGGATGATAAT+TGG - tig0039517:9437-9456 Msa1458290:intergenic 35.0%
AATTATCATCCTTACCTAGC+AGG + tig0039517:9436-9455 Msa1458290:CDS 35.0%
TTTCACTAATGGAAAGAGTC+GGG + tig0039517:9461-9480 Msa1458290:CDS 35.0%
TAAGTTATATGAGGGAGACT+TGG + tig0039517:9605-9624 Msa1458290:intron 35.0%
! TCCGAAGATACGATATTTTG+TGG + tig0039517:9683-9702 Msa1458290:CDS 35.0%
! CAGACAAAACTTGCTTCAAA+CGG + tig0039517:9819-9838 Msa1458290:CDS 35.0%
! CATAAAAGCATACAAGACCA+TGG + tig0039517:9922-9941 Msa1458290:CDS 35.0%
TCTCTTCATGGGATATATTG+GGG + tig0039517:10111-10130 Msa1458290:CDS 35.0%
ATTCCAATTTGGTTGGGAAT+AGG + tig0039517:10287-10306 Msa1458290:intron 35.0%
! CTATACCTGAATTTTCTCAC+CGG + tig0039517:10465-10484 Msa1458290:CDS 35.0%
TTCAATTTCACAGCTAGACA+TGG - tig0039517:10663-10682 Msa1458290:intergenic 35.0%
ACCAGCATATGGTTAATGTT+AGG - tig0039517:10736-10755 Msa1458290:intergenic 35.0%
AACATTAACCATATGCTGGT+AGG + tig0039517:10736-10755 Msa1458290:intron 35.0%
GTAGGAAGGAAACTAATAAG+TGG + tig0039517:10754-10773 Msa1458290:intron 35.0%
AACATGTCCTGTTTGTCAAT+TGG + tig0039517:10833-10852 Msa1458290:intron 35.0%
TTTAGAAACATGCCTTTGCT+GGG + tig0039517:10989-11008 Msa1458290:intron 35.0%
! GGTATCTGATTTTCAATGAG+TGG + tig0039517:11038-11057 Msa1458290:intron 35.0%
! TCGGTACATGTTAATGCTTT+TGG + tig0039517:11288-11307 Msa1458290:intron 35.0%
!! GAATTAGACTTTTCAAGGCT+AGG + tig0039517:11334-11353 Msa1458290:intron 35.0%
TTGCACTTGCATGTTGTAAA+AGG - tig0039517:11437-11456 Msa1458290:intergenic 35.0%
TGTATCCTCATCAATTAGCA+TGG - tig0039517:11485-11504 Msa1458290:intergenic 35.0%
TTGTCATTGAGTGACATTGT+TGG + tig0039517:11600-11619 Msa1458290:intron 35.0%
TGTCATTGAGTGACATTGTT+GGG + tig0039517:11601-11620 Msa1458290:intron 35.0%
CGTAGAAACATAGTCAAATG+TGG + tig0039517:11700-11719 Msa1458290:intron 35.0%
! GTCAAATGTGGTGTTAATTG+TGG + tig0039517:11712-11731 Msa1458290:intron 35.0%
!!! CACGGACATGGTTTTAAAAA+GGG - tig0039517:11789-11808 Msa1458290:intergenic 35.0%
!!! ACACGGACATGGTTTTAAAA+AGG - tig0039517:11790-11809 Msa1458290:intergenic 35.0%
AGTGAATGTTGGAAGCTTTA+GGG - tig0039517:11923-11942 Msa1458290:intergenic 35.0%
CAGTTATCATCAGTGAATGT+TGG - tig0039517:11934-11953 Msa1458290:intergenic 35.0%
! CTGATGATAACTGATTCTCT+TGG + tig0039517:11941-11960 Msa1458290:intron 35.0%
!! TTGGGATGTTTTAAGCAATG+AGG + tig0039517:11977-11996 Msa1458290:CDS 35.0%
!!! AGTCATCCATTTTTGAAGTC+GGG - tig0039517:12094-12113 Msa1458290:intergenic 35.0%
!!! CAGTCATCCATTTTTGAAGT+CGG - tig0039517:12095-12114 Msa1458290:intergenic 35.0%
!! TGCTGTAGTGTGCTTATTTT+TGG + tig0039517:12115-12134 Msa1458290:CDS 35.0%
!!! GTAGTGTGCTTATTTTTGGA+TGG + tig0039517:12119-12138 Msa1458290:CDS 35.0%
AATCCAGTTGAATCAGATGA+TGG + tig0039517:12215-12234 Msa1458290:CDS 35.0%
GTAAAGTTCCTTCTCAAAGA+TGG - tig0039517:12254-12273 Msa1458290:intergenic 35.0%
TCAGAAGAAAATGAGACCAA+CGG + tig0039517:12284-12303 Msa1458290:CDS 35.0%
AGATCAAAACTGGTTAGGTT+TGG + tig0039517:12349-12368 Msa1458290:CDS 35.0%
AAAACTGGTTAGGTTTGGAA+GGG + tig0039517:12354-12373 Msa1458290:CDS 35.0%
CTTCAGAAAATCTAGGAAGT+TGG - tig0039517:12403-12422 Msa1458290:intergenic 35.0%
CTTGAATTTCTTGCTTCATG+AGG + tig0039517:12435-12454 Msa1458290:exon 35.0%
! AGGTTTTCTACTGGTGAATT+AGG - tig0039517:12552-12571 Msa1458290:intergenic 35.0%
! AGTTTGTCTAGGTTTTCTAC+TGG - tig0039517:12561-12580 Msa1458290:intergenic 35.0%
AAACTCGAAGTGGTTTGATT+TGG + tig0039517:12576-12595 Msa1458290:three_prime_UTR 35.0%
! AACTCGAAGTGGTTTGATTT+GGG + tig0039517:12577-12596 Msa1458290:three_prime_UTR 35.0%
AATTGAACATGTTAGATCCG+CGG - tig0039517:12625-12644 Msa1458290:intergenic 35.0%
! AATGAAGTAATGCTTGCTGC+AGG - tig0039517:8235-8254 Msa0080000:intergenic 40.0%
ACCGAATTCCAGATTACTAC+CGG - tig0039517:8525-8544 Msa1458290:intergenic 40.0%
ATCAAGTGATCGGACTTAAG+TGG - tig0039517:8615-8634 Msa1458290:intergenic 40.0%
CTCGTCACTAATCAAGTGAT+CGG - tig0039517:8625-8644 Msa1458290:intergenic 40.0%
AGCTGAACACAAGAAAACAG+TGG - tig0039517:9031-9050 Msa1458290:intergenic 40.0%
! ACTGTTTTCTTGTGTTCAGC+TGG + tig0039517:9030-9049 Msa1458290:intron 40.0%
AGTGAAAATCCTGCTAGGTA+AGG - tig0039517:9448-9467 Msa1458290:intergenic 40.0%
CCATTAGTGAAAATCCTGCT+AGG - tig0039517:9453-9472 Msa1458290:intergenic 40.0%
! CCTAGCAGGATTTTCACTAA+TGG + tig0039517:9450-9469 Msa1458290:CDS 40.0%
TTCACTAATGGAAAGAGTCG+GGG + tig0039517:9462-9481 Msa1458290:CDS 40.0%
TTCGTGCATATTTACACAGC+AGG + tig0039517:9485-9504 Msa1458290:CDS 40.0%
TCGTGCATATTTACACAGCA+GGG + tig0039517:9486-9505 Msa1458290:CDS 40.0%
TGTGGAGTTCAGTTTATCCT+CGG - tig0039517:9888-9907 Msa1458290:intergenic 40.0%
AGGATAAACTGAACTCCACA+TGG + tig0039517:9888-9907 Msa1458290:CDS 40.0%
TATGAAAGCTTCTCTCCATG+TGG - tig0039517:9906-9925 Msa1458290:intergenic 40.0%
CTACAGAAGCAGTCTAGATT+TGG - tig0039517:9968-9987 Msa1458290:intergenic 40.0%
AATCTAGACTGCTTCTGTAG+TGG + tig0039517:9968-9987 Msa1458290:CDS 40.0%
ATCTGTGACTGTAGTAAAGC+AGG + tig0039517:9997-10016 Msa1458290:CDS 40.0%
CAGGGTTCAAATCTCTTCAT+GGG + tig0039517:10100-10119 Msa1458290:intron 40.0%
TATTGGCATAATGACCCACT+TGG - tig0039517:10220-10239 Msa1458290:intergenic 40.0%
! CTCTGACGAGTATATGCTTT+TGG + tig0039517:10249-10268 Msa1458290:intron 40.0%
TCTCCTATTCCCAACCAAAT+TGG - tig0039517:10293-10312 Msa1458290:intergenic 40.0%
GAAAGAATCAAGCAGTGCAA+GGG + tig0039517:10317-10336 Msa1458290:CDS 40.0%
GTTTGGAGATTTCTGCTTGA+AGG + tig0039517:10427-10446 Msa1458290:CDS 40.0%
GATTTCTGCTTGAAGGAGTA+TGG + tig0039517:10434-10453 Msa1458290:CDS 40.0%
TTCATTGTTCTTGCGTCAGA+TGG + tig0039517:10509-10528 Msa1458290:CDS 40.0%
TCATTGTTCTTGCGTCAGAT+GGG + tig0039517:10510-10529 Msa1458290:CDS 40.0%
GCCTAACATTAACCATATGC+TGG + tig0039517:10732-10751 Msa1458290:intron 40.0%
TTAACCATATGCTGGTAGGA+AGG + tig0039517:10740-10759 Msa1458290:intron 40.0%
GAATGTATCCGTGGAATCTT+AGG + tig0039517:10908-10927 Msa1458290:intron 40.0%
! CTTTAGAAACATGCCTTTGC+TGG + tig0039517:10988-11007 Msa1458290:intron 40.0%
CTGATATTTCAACACAACGC+TGG + tig0039517:11017-11036 Msa1458290:intron 40.0%
TGCGTAACACTCTCAAGTTT+AGG + tig0039517:11198-11217 Msa1458290:intron 40.0%
CAAGTTTAGGTCTGTGTGAA+AGG + tig0039517:11211-11230 Msa1458290:intron 40.0%
!! TCTAATATGGACTCGGTGAA+AGG + tig0039517:11312-11331 Msa1458290:intron 40.0%
TCATCAATTAGCATGGCAAG+AGG - tig0039517:11478-11497 Msa1458290:intergenic 40.0%
TCTTGCCATGCTAATTGATG+AGG + tig0039517:11477-11496 Msa1458290:intron 40.0%
GTCATTGAGTGACATTGTTG+GGG + tig0039517:11602-11621 Msa1458290:intron 40.0%
! TGTGGTGTTAATTGTGGTTG+CGG + tig0039517:11718-11737 Msa1458290:intron 40.0%
TTAAAAAGGGACAGAGACTG+TGG - tig0039517:11776-11795 Msa1458290:intergenic 40.0%
! GTGAATGTTGGAAGCTTTAG+GGG - tig0039517:11922-11941 Msa1458290:intergenic 40.0%
CAGTGAATGTTGGAAGCTTT+AGG - tig0039517:11924-11943 Msa1458290:intergenic 40.0%
!! GGATGTTTTAAGCAATGAGG+AGG + tig0039517:11980-11999 Msa1458290:CDS 40.0%
!! TGTTTTAAGCAATGAGGAGG+TGG + tig0039517:11983-12002 Msa1458290:CDS 40.0%
GGTGGTTGAGATAGTATCAT+CGG + tig0039517:12001-12020 Msa1458290:CDS 40.0%
TTCTGGTAAATTCAGCTGCT+CGG + tig0039517:12051-12070 Msa1458290:CDS 40.0%
CAAGTACCCGACTTCAAAAA+TGG + tig0039517:12085-12104 Msa1458290:CDS 40.0%
ATTCAACTGGATTCCCAGAA+TGG - tig0039517:12208-12227 Msa1458290:intergenic 40.0%
TGTCCATCATCTGATTCAAC+TGG - tig0039517:12221-12240 Msa1458290:intergenic 40.0%
CATCAGGTGAAGATCAAAAC+TGG + tig0039517:12339-12358 Msa1458290:CDS 40.0%
GGTGAAGATCAAAACTGGTT+AGG + tig0039517:12344-12363 Msa1458290:CDS 40.0%
CAAAACTGGTTAGGTTTGGA+AGG + tig0039517:12353-12372 Msa1458290:CDS 40.0%
AAACTGGTTAGGTTTGGAAG+GGG + tig0039517:12355-12374 Msa1458290:CDS 40.0%
CTTGAATCTGAGTGTTTACC+AGG - tig0039517:12479-12498 Msa1458290:intergenic 40.0%
!! GGTAACATTTTGATGCTCCT+TGG + tig0039517:12523-12542 Msa1458290:three_prime_UTR 40.0%
AAACCTAGACAAACTCGAAG+TGG + tig0039517:12566-12585 Msa1458290:three_prime_UTR 40.0%
! AAACCACTTCGAGTTTGTCT+AGG - tig0039517:12572-12591 Msa1458290:intergenic 40.0%
ATTGAACATGTTAGATCCGC+GGG - tig0039517:12624-12643 Msa1458290:intergenic 40.0%
AATTCCAGATTACTACCGGG+GGG - tig0039517:8521-8540 Msa1458290:intergenic 45.0%
GAATTCCAGATTACTACCGG+GGG - tig0039517:8522-8541 Msa1458290:intergenic 45.0%
CGAATTCCAGATTACTACCG+GGG - tig0039517:8523-8542 Msa1458290:intergenic 45.0%
CCGAATTCCAGATTACTACC+GGG - tig0039517:8524-8543 Msa1458290:intergenic 45.0%
! CCCGGTAGTAATCTGGAATT+CGG + tig0039517:8521-8540 Msa1458290:intron 45.0%
ACTGAGGATTCATCCTTGAG+CGG + tig0039517:8579-8598 Msa1458290:intron 45.0%
TAGTGACGAGTGTTATCTCG+TGG + tig0039517:8635-8654 Msa1458290:intron 45.0%
! ACGTGAGATCTGTAGTGGAA+AGG + tig0039517:9209-9228 Msa1458290:five_prime_UTR 45.0%
! CGTGAGATCTGTAGTGGAAA+GGG + tig0039517:9210-9229 Msa1458290:five_prime_UTR 45.0%
! AGTCGAAGTACTTGTAGCAG+CGG + tig0039517:9312-9331 Msa1458290:CDS 45.0%
TCTGTGGACAAAAGAGAGCA+AGG + tig0039517:9379-9398 Msa1458290:CDS 45.0%
GGGAATTAATCAGGATGCCA+TGG + tig0039517:9515-9534 Msa1458290:CDS 45.0%
ACTTACTTCCCACACAACCA+TGG - tig0039517:9535-9554 Msa1458290:intergenic 45.0%
! TGTGGTGTCTTTGATGGTCA+TGG + tig0039517:9701-9720 Msa1458290:CDS 45.0%
! TTTGATGGTCATGGTCCACA+AGG + tig0039517:9710-9729 Msa1458290:CDS 45.0%
ATCTTGTTGCGCGTAAAGTG+AGG + tig0039517:9735-9754 Msa1458290:CDS 45.0%
TCTTGTTGCGCGTAAAGTGA+GGG + tig0039517:9736-9755 Msa1458290:CDS 45.0%
AGACCATGGACAAAGAGCTT+AGG + tig0039517:9936-9955 Msa1458290:CDS 45.0%
AGACCTAAGCTCTTTGTCCA+TGG - tig0039517:9942-9961 Msa1458290:intergenic 45.0%
CCATGAAGAGATTTGAACCC+TGG - tig0039517:10102-10121 Msa1458290:intergenic 45.0%
CCAGGGTTCAAATCTCTTCA+TGG + tig0039517:10099-10118 Msa1458290:intron 45.0%
CATGGAGTCATTGCTGTCTT+TGG - tig0039517:10158-10177 Msa1458290:intergenic 45.0%
CAAAGACAGCAATGACTCCA+TGG + tig0039517:10156-10175 Msa1458290:CDS 45.0%
AGTCAACTGAATTGCCACCA+TGG - tig0039517:10176-10195 Msa1458290:intergenic 45.0%
! TTGAAGCCTGATTTGCCAAG+TGG + tig0039517:10202-10221 Msa1458290:intron 45.0%
! TGAAGCCTGATTTGCCAAGT+GGG + tig0039517:10203-10222 Msa1458290:intron 45.0%
AATGACCCACTTGGCAAATC+AGG - tig0039517:10211-10230 Msa1458290:intergenic 45.0%
TTGGTTGGGAATAGGAGAAG+CGG + tig0039517:10295-10314 Msa1458290:intron 45.0%
GGAAAGAATCAAGCAGTGCA+AGG + tig0039517:10316-10335 Msa1458290:CDS 45.0%
AATCAAGCAGTGCAAGGGTA+GGG + tig0039517:10322-10341 Msa1458290:CDS 45.0%
AAGATGAGCCTGAAGTTCCT+AGG + tig0039517:10357-10376 Msa1458290:CDS 45.0%
AGATGAGCCTGAAGTTCCTA+GGG + tig0039517:10358-10377 Msa1458290:CDS 45.0%
CATTGTTCTTGCGTCAGATG+GGG + tig0039517:10511-10530 Msa1458290:CDS 45.0%
GTTTCCTTCCTACCAGCATA+TGG - tig0039517:10747-10766 Msa1458290:intergenic 45.0%
CACACTGCCAATTGACAAAC+AGG - tig0039517:10843-10862 Msa1458290:intergenic 45.0%
CGGATACATTCAAGCACAAC+AGG - tig0039517:10899-10918 Msa1458290:intergenic 45.0%
GTTGTGCTTGAATGTATCCG+TGG + tig0039517:10899-10918 Msa1458290:intron 45.0%
TCCGTGGAATCTTAGGAGTT+CGG + tig0039517:10915-10934 Msa1458290:intron 45.0%
TCCGAACTCCTAAGATTCCA+CGG - tig0039517:10919-10938 Msa1458290:intergenic 45.0%
AAACATGCCTTTGCTGGGTT+TGG + tig0039517:10994-11013 Msa1458290:intron 45.0%
ATATCAGCCAAACCCAGCAA+AGG - tig0039517:11004-11023 Msa1458290:intergenic 45.0%
AAGCGCATCCCTTCTATGAT+TGG - tig0039517:11074-11093 Msa1458290:intergenic 45.0%
GTACCATGCTATCGTTGATG+TGG - tig0039517:11550-11569 Msa1458290:intergenic 45.0%
ATCATCAGCAGCAAGGATTC+TGG + tig0039517:12034-12053 Msa1458290:CDS 45.0%
TCTGGTAAATTCAGCTGCTC+GGG + tig0039517:12052-12071 Msa1458290:CDS 45.0%
TAAATTCAGCTGCTCGGGAA+TGG + tig0039517:12057-12076 Msa1458290:CDS 45.0%
ACCATTCAGAGCAACCATTC+TGG + tig0039517:12191-12210 Msa1458290:CDS 45.0%
CCATTCAGAGCAACCATTCT+GGG + tig0039517:12192-12211 Msa1458290:CDS 45.0%
! AATCGGAGCCATCTTTGAGA+AGG + tig0039517:12243-12262 Msa1458290:CDS 45.0%
GTTGAAGATGAAGCAGCATC+AGG + tig0039517:12323-12342 Msa1458290:CDS 45.0%
ACTGGTGAATTAGGCTACCA+AGG - tig0039517:12543-12562 Msa1458290:intergenic 45.0%
AGTTTACGGTTTCAAACCCG+CGG + tig0039517:12605-12624 Msa1458290:three_prime_UTR 45.0%
!!! TTTTATTTTTATTTTACATT+TGG + tig0039517:8960-8979 Msa1458290:intron 5.0%
TTTACCCCCCGGTAGTAATC+TGG + tig0039517:8514-8533 Msa1458290:intron 50.0%
GCTCAAGGATGAATCCTCAG+TGG - tig0039517:8580-8599 Msa1458290:intergenic 50.0%
! GTGTTATCTCGTGGCTTGCA+AGG + tig0039517:8644-8663 Msa1458290:intron 50.0%
TCCGTTCAAATAGCGTCCCA+CGG + tig0039517:9061-9080 Msa1458290:five_prime_UTR 50.0%
TCCGTGGGACGCTATTTGAA+CGG - tig0039517:9065-9084 Msa1458290:intergenic 50.0%
TGCGAACGTGAGATCTGTAG+TGG + tig0039517:9204-9223 Msa1458290:five_prime_UTR 50.0%
! GTCGAAGTACTTGTAGCAGC+GGG + tig0039517:9313-9332 Msa1458290:CDS 50.0%
ATTTACACAGCAGGGTCGCA+AGG + tig0039517:9494-9513 Msa1458290:CDS 50.0%
TTTACACAGCAGGGTCGCAA+GGG + tig0039517:9495-9514 Msa1458290:CDS 50.0%
GGGTCGCAAGGGAATTAATC+AGG + tig0039517:9506-9525 Msa1458290:CDS 50.0%
ATCAGGATGCCATGGTTGTG+TGG + tig0039517:9523-9542 Msa1458290:CDS 50.0%
TCAGGATGCCATGGTTGTGT+GGG + tig0039517:9524-9543 Msa1458290:CDS 50.0%
CGGAACATAACACCAGACTG+TGG + tig0039517:9839-9858 Msa1458290:CDS 50.0%
TTCTCAGACTCACCACAGTC+TGG - tig0039517:9854-9873 Msa1458290:intergenic 50.0%
AGACTGTGGTGAGTCTGAGA+AGG + tig0039517:9853-9872 Msa1458290:CDS 50.0%
TGAGAAGGATTGTTCTGCCG+AGG + tig0039517:9868-9887 Msa1458290:CDS 50.0%
TGGGGATTCTCGAGCAATCA+TGG + tig0039517:10129-10148 Msa1458290:CDS 50.0%
GGGGATTCTCGAGCAATCAT+GGG + tig0039517:10130-10149 Msa1458290:CDS 50.0%
AGACAGCAATGACTCCATGG+TGG + tig0039517:10159-10178 Msa1458290:CDS 50.0%
GAATCAAGCAGTGCAAGGGT+AGG + tig0039517:10321-10340 Msa1458290:CDS 50.0%
!!! TGCCTTTTGATGACGCACCA+GGG + tig0039517:10387-10406 Msa1458290:CDS 50.0%
AACCCTGGTGCGTCATCAAA+AGG - tig0039517:10392-10411 Msa1458290:intergenic 50.0%
! ACCAGGGTTAGCAATGGCTA+GGG + tig0039517:10403-10422 Msa1458290:CDS 50.0%
! TTAGCAATGGCTAGGGCGTT+TGG + tig0039517:10410-10429 Msa1458290:CDS 50.0%
AGCAGCCGGTGAGAAAATTC+AGG - tig0039517:10473-10492 Msa1458290:intergenic 50.0%
TGCTATCGTTGATGTGGCAG+AGG - tig0039517:11544-11563 Msa1458290:intergenic 50.0%
CTGCCACATCAACGATAGCA+TGG + tig0039517:11544-11563 Msa1458290:intron 50.0%
AGTAGAGACAGACACGGACA+TGG - tig0039517:11801-11820 Msa1458290:intergenic 50.0%
TCCTGCAGTAGAGACAGACA+CGG - tig0039517:11807-11826 Msa1458290:intergenic 50.0%
CTTGCTGCTGATGATCGTGT+TGG - tig0039517:12029-12048 Msa1458290:intergenic 50.0%
CAACACGATCATCAGCAGCA+AGG + tig0039517:12027-12046 Msa1458290:CDS 50.0%
! CCCAGAATGGTTGCTCTGAA+TGG - tig0039517:12195-12214 Msa1458290:intergenic 50.0%
TGGTTACTCAGCTCCGCTCA+AGG - tig0039517:8595-8614 Msa1458290:intergenic 55.0%
ACTTGTAGCAGCGGGAGCAA+TGG + tig0039517:9321-9340 Msa1458290:CDS 55.0%
CGCGCAACAAGATGACCTTG+TGG - tig0039517:9728-9747 Msa1458290:intergenic 55.0%
AGCCTGAAGTTCCTAGGGTG+TGG + tig0039517:10363-10382 Msa1458290:CDS 55.0%
AGCCACACCCTAGGAACTTC+AGG - tig0039517:10368-10387 Msa1458290:intergenic 55.0%
TCAAAAGGCAGCCACACCCT+AGG - tig0039517:10377-10396 Msa1458290:intergenic 55.0%
!!! CTGCCTTTTGATGACGCACC+AGG + tig0039517:10386-10405 Msa1458290:CDS 55.0%
! TGACGCACCAGGGTTAGCAA+TGG + tig0039517:10397-10416 Msa1458290:CDS 55.0%
! CACCAGGGTTAGCAATGGCT+AGG + tig0039517:10402-10421 Msa1458290:CDS 55.0%
GATCTCTGTCTGTGAGCAGC+CGG - tig0039517:10487-10506 Msa1458290:intergenic 55.0%
TGGTCAGGGTAGCTACATCG+AGG - tig0039517:11756-11775 Msa1458290:intergenic 55.0%
AGGGACAGAGACTGTGGTCA+GGG - tig0039517:11770-11789 Msa1458290:intergenic 55.0%
AAGGGACAGAGACTGTGGTC+AGG - tig0039517:11771-11790 Msa1458290:intergenic 55.0%
TCCGTGTCTGTCTCTACTGC+AGG + tig0039517:11803-11822 Msa1458290:intron 55.0%
ATCGACAGACACTGCTCCGT+TGG - tig0039517:12303-12322 Msa1458290:intergenic 55.0%
GCCCTAGCCATTGCTAACCC+TGG - tig0039517:10407-10426 Msa1458290:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0039517 gene 8232 12793 8232 ID=Msa1458290;Name=Msa1458290
tig0039517 mRNA 8232 12793 8232 ID=Msa1458290-mRNA-1;Parent=Msa1458290;Name=Msa1458290-mRNA-1;_AED=0.11;_eAED=0.11;_QI=291|1|1|1|0.8|0.66|6|354|470
tig0039517 exon 8232 8283 8232 ID=Msa1458290-mRNA-1:exon:21682;Parent=Msa1458290-mRNA-1
tig0039517 exon 9049 9548 9049 ID=Msa1458290-mRNA-1:exon:21683;Parent=Msa1458290-mRNA-1
tig0039517 exon 9674 10018 9674 ID=Msa1458290-mRNA-1:exon:21684;Parent=Msa1458290-mRNA-1
tig0039517 exon 10103 10220 10103 ID=Msa1458290-mRNA-1:exon:21685;Parent=Msa1458290-mRNA-1
tig0039517 exon 10309 10532 10309 ID=Msa1458290-mRNA-1:exon:21686;Parent=Msa1458290-mRNA-1
tig0039517 exon 11975 12793 11975 ID=Msa1458290-mRNA-1:exon:21687;Parent=Msa1458290-mRNA-1
tig0039517 five_prime_UTR 8232 8283 8232 ID=Msa1458290-mRNA-1:five_prime_utr;Parent=Msa1458290-mRNA-1
tig0039517 five_prime_UTR 9049 9287 9049 ID=Msa1458290-mRNA-1:five_prime_utr;Parent=Msa1458290-mRNA-1
tig0039517 CDS 9288 9548 9288 ID=Msa1458290-mRNA-1:cds;Parent=Msa1458290-mRNA-1
tig0039517 CDS 9674 10018 9674 ID=Msa1458290-mRNA-1:cds;Parent=Msa1458290-mRNA-1
tig0039517 CDS 10103 10220 10103 ID=Msa1458290-mRNA-1:cds;Parent=Msa1458290-mRNA-1
tig0039517 CDS 10309 10532 10309 ID=Msa1458290-mRNA-1:cds;Parent=Msa1458290-mRNA-1
tig0039517 CDS 11975 12439 11975 ID=Msa1458290-mRNA-1:cds;Parent=Msa1458290-mRNA-1
tig0039517 three_prime_UTR 12440 12793 12440 ID=Msa1458290-mRNA-1:three_prime_utr;Parent=Msa1458290-mRNA-1
Gene Sequence

>Msa1458290

ATGGGTTGTTGTGTCTCAACGAGCAGTCGAAGTACTTGTAGCAGCGGGAGCAATGGAGAGATGATAACTCCATCTTGCTTCGAAATTTGTTTCTGTGGACAAAAGAGAGCAAGGAGAACATTTTCTGATCATGCTATTTCTCTACACCAATTATCATCCTTACCTAGCAGGATTTTCACTAATGGAAAGAGTCGGGGTTCGTGCATATTTACACAGCAGGGTCGCAAGGGAATTAATCAGGATGCCATGGTTGTGTGGGAAGATTTCATGTCCGAAGATACGATATTTTGTGGTGTCTTTGATGGTCATGGTCCACAAGGTCATCTTGTTGCGCGTAAAGTGAGGGATACATTGCCAGTAAAATTGCTTTCATTTTGGCATTCTCTTGAATCGAAACAAAATAGGTCAGACAAAACTTGCTTCAAACGGAACATAACACCAGACTGTGGTGAGTCTGAGAAGGATTGTTCTGCCGAGGATAAACTGAACTCCACATGGAGAGAAGCTTTCATAAAAGCATACAAGACCATGGACAAAGAGCTTAGGTCTTATCCAAATCTAGACTGCTTCTGTAGTGGAAGCACATCTGTGACTGTAGTAAAGCAGGGTTCAAATCTCTTCATGGGATATATTGGGGATTCTCGAGCAATCATGGGATCCAAAGACAGCAATGACTCCATGGTGGCAATTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCAAGAGAAGCGGAAAGAATCAAGCAGTGCAAGGGTAGGGTTTTTGCTTTGCAAGATGAGCCTGAAGTTCCTAGGGTGTGGCTGCCTTTTGATGACGCACCAGGGTTAGCAATGGCTAGGGCGTTTGGAGATTTCTGCTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTTCTCACCGGCTGCTCACAGACAGAGATCAATTCATTGTTCTTGCGTCAGATGGGGTTTGGGATGTTTTAAGCAATGAGGAGGTGGTTGAGATAGTATCATCGGCACCAACACGATCATCAGCAGCAAGGATTCTGGTAAATTCAGCTGCTCGGGAATGGAAACTCAAGTACCCGACTTCAAAAATGGATGACTGTGCTGTAGTGTGCTTATTTTTGGATGGTAAAATGGACTCAGAATCAGATTATGATGAACAGGGCTTCTCTTCTGCAACCATTCAGAGCAACCATTCTGGGAATCCAGTTGAATCAGATGATGGACAAAAATCGGAGCCATCTTTGAGAAGGAACTTTACTGTGAGATCATCAGAAGAAAATGAGACCAACGGAGCAGTGTCTGTCGATGTTGAAGATGAAGCAGCATCAGGTGAAGATCAAAACTGGTTAGGTTTGGAAGGGGTCACTCGTGTAAACTCACTCGTCCAACTTCCTAGATTTTCTGAAGAAAGATCAAACTCTTGA

Protein sequence

>Msa1458290

MGCCVSTSSRSTCSSGSNGEMITPSCFEICFCGQKRARRTFSDHAISLHQLSSLPSRIFTNGKSRGSCIFTQQGRKGINQDAMVVWEDFMSEDTIFCGVFDGHGPQGHLVARKVRDTLPVKLLSFWHSLESKQNRSDKTCFKRNITPDCGESEKDCSAEDKLNSTWREAFIKAYKTMDKELRSYPNLDCFCSGSTSVTVVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKQCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVNSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGFSSATIQSNHSGNPVESDDGQKSEPSLRRNFTVRSSEENETNGAVSVDVEDEAASGEDQNWLGLEGVTRVNSLVQLPRFSEERSNS*