AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0515340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0515340 MtrunA17_Chr3g0124601 99.449 363 2 0 1 363 1 363 0.0 751
Msa0515340 MtrunA17_Chr8g0382861 68.839 353 102 4 12 363 13 358 1.69e-176 494
Msa0515340 MtrunA17_Chr8g0353501 56.269 327 125 4 43 361 150 466 3.41e-117 347
Msa0515340 MtrunA17_Chr3g0115371 49.429 350 170 3 14 359 1 347 4.49e-116 341
Msa0515340 MtrunA17_Chr7g0256211 58.667 300 111 3 70 361 158 452 9.80e-113 335
Msa0515340 MtrunA17_Chr5g0424861 49.716 352 165 4 14 358 1 347 2.04e-111 329
Msa0515340 MtrunA17_Chr5g0422771 55.556 306 124 3 64 361 163 464 6.36e-110 329
Msa0515340 MtrunA17_Chr2g0321431 54.795 292 120 4 73 361 187 469 6.63e-109 327
Msa0515340 MtrunA17_Chr1g0210151 55.401 287 124 2 79 361 54 340 1.27e-105 313
Msa0515340 MtrunA17_Chr1g0174701 52.117 307 138 3 64 361 200 506 1.18e-103 314
Msa0515340 MtrunA17_Chr4g0026401 46.991 349 155 6 30 361 126 461 1.79e-103 313
Msa0515340 MtrunA17_Chr7g0258321 50.321 312 148 2 57 361 152 463 6.77e-103 311
Msa0515340 MtrunA17_Chr5g0424851 53.704 216 99 1 144 358 7 222 2.16e-75 239
Msa0515340 MtrunA17_Chr5g0424851 53.960 202 93 0 148 349 225 426 6.67e-72 230
Msa0515340 MtrunA17_Chr3g0093451 57.669 163 58 3 82 235 49 209 1.32e-59 191
Msa0515340 MtrunA17_Chr1g0196951 38.806 201 98 5 160 354 59 240 7.16e-34 125
Msa0515340 MtrunA17_Chr8g0384821 25.957 235 139 5 150 349 14 248 7.80e-16 76.6
Msa0515340 MtrunA17_Chr7g0242651 24.651 215 152 5 147 351 5 219 1.24e-14 72.8
Msa0515340 MtrunA17_Chr2g0315631 23.182 220 135 3 151 350 4 209 2.09e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0515340 AT5G65210.5 67.663 368 114 2 1 363 1 368 0.0 515
Msa0515340 AT5G65210.7 67.663 368 114 2 1 363 1 368 0.0 515
Msa0515340 AT5G65210.3 67.663 368 114 2 1 363 1 368 0.0 515
Msa0515340 AT5G65210.1 67.663 368 114 2 1 363 1 368 0.0 515
Msa0515340 AT5G65210.2 67.663 368 114 2 1 363 1 368 0.0 515
Msa0515340 AT5G65210.4 67.663 368 114 2 1 363 1 368 0.0 515
Msa0515340 AT5G10030.5 68.767 365 111 2 1 363 1 364 0.0 512
Msa0515340 AT5G10030.3 68.767 365 111 2 1 363 1 364 0.0 512
Msa0515340 AT5G10030.1 68.767 365 111 2 1 363 1 364 0.0 512
Msa0515340 AT5G10030.4 68.767 365 111 2 1 363 1 364 0.0 512
Msa0515340 AT5G10030.2 68.767 365 111 2 1 363 1 364 0.0 512
Msa0515340 AT5G65210.6 73.064 297 78 1 69 363 2 298 1.67e-160 452
Msa0515340 AT1G77920.1 56.764 377 136 7 2 363 4 368 8.89e-143 409
Msa0515340 AT1G22070.1 56.557 366 143 4 12 361 17 382 1.93e-135 391
Msa0515340 AT5G06950.2 59.516 289 107 2 79 361 46 330 2.16e-113 333
Msa0515340 AT5G06950.4 59.516 289 107 2 79 361 46 330 2.16e-113 333
Msa0515340 AT5G06950.1 59.516 289 107 2 79 361 46 330 2.16e-113 333
Msa0515340 AT5G06950.5 59.516 289 107 2 79 361 46 330 2.16e-113 333
Msa0515340 AT5G06950.3 59.516 289 107 2 79 361 46 330 2.16e-113 333
Msa0515340 AT3G12250.6 54.268 328 131 4 49 361 7 330 2.13e-112 331
Msa0515340 AT3G12250.2 54.268 328 131 4 49 361 7 330 2.13e-112 331
Msa0515340 AT3G12250.7 54.268 328 131 4 49 361 7 330 2.13e-112 331
Msa0515340 AT3G12250.1 54.268 328 131 4 49 361 7 330 2.13e-112 331
Msa0515340 AT3G12250.3 55.305 311 129 2 57 361 18 324 1.93e-111 328
Msa0515340 AT3G12250.5 57.191 299 114 3 73 361 9 303 3.57e-111 327
Msa0515340 AT5G06960.3 58.824 289 109 2 79 361 26 310 8.14e-111 326
Msa0515340 AT5G06960.2 58.824 289 109 2 79 361 46 330 9.62e-111 327
Msa0515340 AT5G06960.1 58.824 289 109 2 79 361 46 330 9.62e-111 327
Msa0515340 AT3G12250.4 55.305 311 129 2 57 361 49 355 1.38e-110 327
Msa0515340 AT1G08320.2 56.098 287 111 3 79 361 54 329 9.75e-110 325
Msa0515340 AT1G08320.5 56.098 287 111 3 79 361 54 329 9.75e-110 325
Msa0515340 AT1G08320.1 56.098 287 111 3 79 361 178 453 3.36e-108 325
Msa0515340 AT1G08320.4 56.098 287 111 3 79 361 178 453 3.36e-108 325
Msa0515340 AT1G08320.3 56.098 287 111 3 79 361 178 453 3.36e-108 325
Msa0515340 AT5G06839.1 49.538 325 147 4 52 361 93 415 4.68e-102 307
Msa0515340 AT5G06839.2 49.387 326 147 4 52 361 93 416 7.20e-102 307
Msa0515340 AT5G06839.3 52.685 298 126 3 79 361 161 458 1.13e-101 308
Msa0515340 AT1G68640.1 52.922 308 136 3 61 361 147 452 3.67e-99 301
Msa0515340 AT1G58330.1 26.126 222 151 4 143 351 2 223 1.04e-18 84.3
Msa0515340 AT3G14880.2 26.126 222 129 7 147 343 6 217 1.04e-12 67.4
Msa0515340 AT3G14880.1 25.328 229 129 7 147 343 6 224 7.70e-12 65.1

Find 111 sgRNAs with CRISPR-Local

Find 211 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTGTAAATAAATTAATTT+TGG 0.164639 3_4:+66573124 Msa0515340:three_prime_UTR
AAGAGTGTTTGTAATGTTAT+TGG 0.192356 3_4:-66569760 None:intergenic
AGCTCGATGTTTGCTTGCTT+TGG 0.213054 3_4:+66572849 Msa0515340:CDS
TTGATTTAATTGCAGATTCT+TGG 0.226068 3_4:+66572247 Msa0515340:intron
AAAACTGCAGGGAATGTATA+TGG 0.249625 3_4:+66571600 Msa0515340:intron
CCTAAACCACACATTGTATA+TGG 0.292874 3_4:-66573028 None:intergenic
CAAGTCCGCCTCATCAATTA+AGG 0.315142 3_4:-66570942 None:intergenic
TTCTCATTTCCGAGATTTGC+CGG 0.317139 3_4:-66571826 None:intergenic
TTAATTGCAGTTTGCTATAG+AGG 0.320466 3_4:+66570752 Msa0515340:intron
GCAGCCTTTGAGATGGAGTA+TGG 0.346430 3_4:+66571782 Msa0515340:CDS
GCTCGATGTTTGCTTGCTTT+GGG 0.348084 3_4:+66572850 Msa0515340:CDS
CATGTTCTAACCTTATCAAT+AGG 0.384759 3_4:-66571140 None:intergenic
TCTGTCAATGGTTCAATCAT+TGG 0.390810 3_4:-66572271 None:intergenic
CCATATACAATGTGTGGTTT+AGG 0.401655 3_4:+66573028 Msa0515340:three_prime_UTR
AATATTATAGAAAGTTGAAA+TGG 0.410564 3_4:-66569789 None:intergenic
CATACTTGTTAGATGTTCCT+AGG 0.414801 3_4:-66571100 None:intergenic
GGCTCTTACGAGCAGCTTCT+CGG 0.427961 3_4:-66571286 None:intergenic
CTTCTCCCCACATATTAATC+TGG 0.429966 3_4:-66570883 None:intergenic
CACATATTAATCTGGTGAAT+AGG 0.436108 3_4:-66570875 None:intergenic
TTTAACAGGCTGACCATCTT+CGG 0.437689 3_4:+66572779 Msa0515340:intron
AACAAGACTAAGCAGGTTCT+CGG 0.440007 3_4:-66572924 None:intergenic
ATTGGGTTGATGAGCAAAAC+CGG 0.440031 3_4:+66571807 Msa0515340:CDS
AATGTATATGGGTGGTGGGT+TGG 0.443309 3_4:+66571612 Msa0515340:CDS
ACAAGACTAAGCAGGTTCTC+GGG 0.443620 3_4:-66572923 None:intergenic
TTGTAATGTTATTGGAGAAT+GGG 0.444379 3_4:-66569752 None:intergenic
CTTGAAGTTTGATAGTAGTC+AGG 0.454381 3_4:+66570961 Msa0515340:CDS
TTCGATAGATTTCAGCATAG+TGG 0.456188 3_4:-66571910 None:intergenic
AATCGTTGTTGCTCTGTCAA+TGG 0.456266 3_4:-66572283 None:intergenic
TCTTGTGAGCTTTGTGAACC+AGG 0.458406 3_4:+66572468 Msa0515340:CDS
AGCTCAAAGCCCTCAGGCGT+TGG 0.459290 3_4:-66572882 None:intergenic
GAGCTCAGGATGCTGGTTGA+TGG 0.463581 3_4:+66571878 Msa0515340:CDS
TGAGATGGAGTATGGACATT+GGG 0.465713 3_4:+66571790 Msa0515340:CDS
CACAGTTTGTTTCCTCGAGA+AGG 0.467650 3_4:+66570837 Msa0515340:CDS
TTTGTAATGTTATTGGAGAA+TGG 0.474133 3_4:-66569753 None:intergenic
TATAGAAAGTTGAAATGGAT+GGG 0.474395 3_4:-66569784 None:intergenic
TGAGGGCTTTGAGCTCACTA+TGG 0.474812 3_4:+66572890 Msa0515340:CDS
TCGTTTGAAGTTAGTGCAGT+TGG 0.476876 3_4:+66571442 Msa0515340:CDS
TTTGCTGGACCTGTGAATCC+AGG 0.482156 3_4:+66571652 Msa0515340:CDS
CGCCTCATCAATTAAGGGAA+TGG 0.487369 3_4:-66570936 None:intergenic
GTTTCTCCATGCCTTGTGAA+AGG 0.488025 3_4:-66572351 None:intergenic
GATGCTTCTCATGGTATCCT+AGG 0.490549 3_4:+66571083 Msa0515340:CDS
GCAAGGTTTCCTGCCGAAGA+TGG 0.491320 3_4:-66572792 None:intergenic
TTTCTCCATGCCTTGTGAAA+GGG 0.491745 3_4:-66572350 None:intergenic
AAGATAGCTGTAGCTTCTAA+AGG 0.493814 3_4:+66570032 Msa0515340:five_prime_UTR
AGCTAATAGACCTATTGATA+AGG 0.501170 3_4:+66571130 Msa0515340:CDS
CTCGCTGATAGCGTAGCAGC+TGG 0.502070 3_4:+66572385 Msa0515340:CDS
CAGGGAATGTATATGGGTGG+TGG 0.504131 3_4:+66571607 Msa0515340:intron
AAGTCCGCCTCATCAATTAA+GGG 0.508625 3_4:-66570941 None:intergenic
ATTGACAGAGCAACAACGAT+TGG 0.518816 3_4:+66572285 Msa0515340:CDS
TATGAGTCTCTCTTTGAAGA+TGG 0.519256 3_4:+66569932 Msa0515340:five_prime_UTR
ACAAACCAACCTGGATTCAC+AGG 0.524884 3_4:-66571661 None:intergenic
TCGCCCTTCTGAGCTTCTCA+AGG 0.526161 3_4:+66572027 Msa0515340:CDS
TGACATAGAGCTCAGGATGC+TGG 0.526532 3_4:+66571871 Msa0515340:CDS
ACAGGCTGACCATCTTCGGC+AGG 0.532331 3_4:+66572783 Msa0515340:intron
TTATAGAAAGTTGAAATGGA+TGG 0.532934 3_4:-66569785 None:intergenic
CAGATTAATATGTGGGGAGA+AGG 0.534968 3_4:+66570884 Msa0515340:CDS
ATCACCTTGAGAAGCTCAGA+AGG 0.537726 3_4:-66572031 None:intergenic
TCCACAGATGGCTACTGCAA+TGG 0.537758 3_4:+66572432 Msa0515340:CDS
AGAATATTTCCAACGCCTGA+GGG 0.537877 3_4:+66572873 Msa0515340:CDS
AGGAATTGCAGCCTTTGAGA+TGG 0.538267 3_4:+66571775 Msa0515340:intron
AAACTGCAGGGAATGTATAT+GGG 0.538541 3_4:+66571601 Msa0515340:intron
TGAGCAAAACCGGCAAATCT+CGG 0.539595 3_4:+66571817 Msa0515340:CDS
AGATGCCCTTTCACAAGGCA+TGG 0.540096 3_4:+66572345 Msa0515340:CDS
GTTGGTAACAAGATTTGAGC+GGG 0.544320 3_4:+66570002 Msa0515340:five_prime_UTR
GCTCGAACGTGTTAGACAGC+AGG 0.550918 3_4:+66571472 Msa0515340:CDS
TATTCACCAGATTAATATGT+GGG 0.557449 3_4:+66570877 Msa0515340:CDS
TGTTCGCGACATTTGTTGCA+AGG 0.557667 3_4:-66572809 None:intergenic
TTGAGATGGAGTATGGACAT+TGG 0.559206 3_4:+66571789 Msa0515340:CDS
CTATTCACCAGATTAATATG+TGG 0.559375 3_4:+66570876 Msa0515340:CDS
ATAGTGAGCTCAAAGCCCTC+AGG 0.562814 3_4:-66572888 None:intergenic
GCAGCTGGACAATTCATTGA+AGG 0.563520 3_4:+66572400 Msa0515340:CDS
AGGGAATGTATATGGGTGGT+GGG 0.568452 3_4:+66571608 Msa0515340:intron
GAGAATATTTCCAACGCCTG+AGG 0.568747 3_4:+66572872 Msa0515340:CDS
GGAGAAGGCTTCAAAAGTAA+TGG 0.571903 3_4:+66570899 Msa0515340:CDS
GACGGCGAATTCATGCTCAA+TGG 0.573598 3_4:-66570812 None:intergenic
TAAATGAAACGTGATGAGTA+TGG 0.573929 3_4:+66572977 Msa0515340:three_prime_UTR
TCTCCACAACAAAAGACTGC+AGG 0.574821 3_4:-66573065 None:intergenic
CTTGTTGACATGATTGTCCA+AGG 0.580404 3_4:-66572318 None:intergenic
TCCATTGCAGTAGCCATCTG+TGG 0.581181 3_4:-66572433 None:intergenic
ATCCATTCCCTTAATTGATG+AGG 0.582525 3_4:+66570934 Msa0515340:CDS
TGTAATGTTATTGGAGAATG+GGG 0.582747 3_4:-66569751 None:intergenic
TAGTCAGAGGATGCTTCTCA+TGG 0.584672 3_4:+66571074 Msa0515340:intron
CGATTGGATATCGATAACCT+TGG 0.584683 3_4:+66572301 Msa0515340:CDS
AGGAACTTATATTCCACAGA+TGG 0.586141 3_4:+66572420 Msa0515340:CDS
ATTGAAGACTGATTTAATTG+CGG 0.586307 3_4:+66570778 Msa0515340:five_prime_UTR
CATTCCCTTAATTGATGAGG+CGG 0.591538 3_4:+66570937 Msa0515340:CDS
GTATTAGTGACATAGAGCTC+AGG 0.591773 3_4:+66571864 Msa0515340:CDS
TATTGGAGAATGGGGAGTGG+TGG 0.592334 3_4:-66569743 None:intergenic
ATAGAAAGTTGAAATGGATG+GGG 0.597213 3_4:-66569783 None:intergenic
CTCAAATCTTGTTACCAACA+TGG 0.598716 3_4:-66569998 None:intergenic
AAATTAGTCTGTGTGAAAGT+TGG 0.601947 3_4:+66573194 Msa0515340:three_prime_UTR
ATTGGTCATCATCACCATGT+TGG 0.602722 3_4:+66569984 Msa0515340:five_prime_UTR
TGTTATTGGAGAATGGGGAG+TGG 0.606277 3_4:-66569746 None:intergenic
GCAGAAGATGCCCTTTCACA+AGG 0.607214 3_4:+66572340 Msa0515340:CDS
TCAAAACCATATACAATGTG+TGG 0.611088 3_4:+66573022 Msa0515340:three_prime_UTR
GTCTTGCAACAAGACTAAGC+AGG 0.618652 3_4:-66572931 None:intergenic
CAAGACTAAGCAGGTTCTCG+GGG 0.624393 3_4:-66572922 None:intergenic
GCAAACATCGAGCTGACTGA+CGG 0.633030 3_4:-66572840 None:intergenic
GATTAAATATGCAGATACAA+AGG 0.638966 3_4:+66571249 Msa0515340:intron
GAGGAAACAAACTGTGCGGA+CGG 0.640938 3_4:-66570830 None:intergenic
ATGTCCATACTCCATCTCAA+AGG 0.641308 3_4:-66571786 None:intergenic
TTTATGTGATGTCCGGCATG+TGG 0.642596 3_4:+66571963 Msa0515340:CDS
ATACACACTCATCCTTCTCG+AGG 0.650671 3_4:-66570849 None:intergenic
TGTTGGTAACAAGATTTGAG+CGG 0.659293 3_4:+66570001 Msa0515340:five_prime_UTR
CACAAGGCATGGAGAAACTG+CGG 0.659798 3_4:+66572356 Msa0515340:CDS
TCACCTTGAGAAGCTCAGAA+GGG 0.664994 3_4:-66572030 None:intergenic
CTGCAGGGAATGTATATGGG+TGG 0.681880 3_4:+66571604 Msa0515340:intron
ATTCACCAGATTAATATGTG+GGG 0.681960 3_4:+66570878 Msa0515340:CDS
GTCCGGCATGTGGAAAACAA+CGG 0.755517 3_4:+66571973 Msa0515340:CDS
TCTCGAGGAAACAAACTGTG+CGG 0.757278 3_4:-66570834 None:intergenic
AGACTGATTTAATTGCGGCG+CGG 0.780685 3_4:+66570783 Msa0515340:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTACAATATAAATATAAAAA+TGG - chr3_4:66569881-66569900 None:intergenic 10.0%
!!! ATTAATTTTAGTACAAATAT+AGG - chr3_4:66570339-66570358 None:intergenic 10.0%
!! TTTATTAAATTGAAAAGTAA+TGG - chr3_4:66572518-66572537 None:intergenic 10.0%
!!! GTTTGTAAATAAATTAATTT+TGG + chr3_4:66573124-66573143 Msa0515340:three_prime_UTR 10.0%
!! AATATTATAGAAAGTTGAAA+TGG - chr3_4:66569792-66569811 None:intergenic 15.0%
!! AATATAAAAATGGAAATGAA+AGG - chr3_4:66569871-66569890 None:intergenic 15.0%
!! ATTAATATAATTCTAATTCG+AGG + chr3_4:66570118-66570137 Msa0515340:intron 15.0%
!!! AAGAAAAAAAAGTACAAAAT+AGG - chr3_4:66570443-66570462 None:intergenic 15.0%
!! TTTAATTCCATATTCAATTA+TGG + chr3_4:66572184-66572203 Msa0515340:intron 15.0%
!! GAAAAATTTATAATGTAGTA+TGG + chr3_4:66572210-66572229 Msa0515340:intron 15.0%
!!! GTATATGTTTATTTTATAAC+CGG + chr3_4:66572670-66572689 Msa0515340:intron 15.0%
!!! TATATGTTTATTTTATAACC+GGG + chr3_4:66572671-66572690 Msa0515340:intron 15.0%
!!! ATAAGATAGATATATGGTTT+TGG - chr3_4:66570190-66570209 None:intergenic 20.0%
!! CATATCATAAGATAGATATA+TGG - chr3_4:66570196-66570215 None:intergenic 20.0%
!!! TAACTGGTCTATAAAAAATT+TGG + chr3_4:66570304-66570323 Msa0515340:intron 20.0%
!!! TACAATTTTATCATCAAATC+AGG - chr3_4:66570376-66570395 None:intergenic 20.0%
!!! TTTTGTACTTTTTTTTCTTC+TGG + chr3_4:66570444-66570463 Msa0515340:intron 20.0%
!! TTTATTGCCTATTAAAATCA+AGG + chr3_4:66570496-66570515 Msa0515340:intron 20.0%
!!! TGAAATTCCTTGATTTTAAT+AGG - chr3_4:66570506-66570525 None:intergenic 20.0%
!! TACTAAAAAAGTTGAATAAG+TGG + chr3_4:66570543-66570562 Msa0515340:intron 20.0%
!! TATAAAACATGAATCCAATT+TGG - chr3_4:66571049-66571068 None:intergenic 20.0%
!! AAATTTATAATGTAGTATGG+TGG + chr3_4:66572213-66572232 Msa0515340:intron 20.0%
!! AGTTAAATATGTGATTCTAA+TGG - chr3_4:66572749-66572768 None:intergenic 20.0%
! TTGTAATGTTATTGGAGAAT+GGG - chr3_4:66569755-66569774 None:intergenic 25.0%
! TTTGTAATGTTATTGGAGAA+TGG - chr3_4:66569756-66569775 None:intergenic 25.0%
!!! AAGAGTGTTTGTAATGTTAT+TGG - chr3_4:66569763-66569782 None:intergenic 25.0%
! TATAGAAAGTTGAAATGGAT+GGG - chr3_4:66569787-66569806 None:intergenic 25.0%
! TTATAGAAAGTTGAAATGGA+TGG - chr3_4:66569788-66569807 None:intergenic 25.0%
!!! CAAAAAAAAGGTTGTTGTTT+TGG - chr3_4:66570266-66570285 None:intergenic 25.0%
! TAGAGTATAATCTGTTTCAT+AGG + chr3_4:66570399-66570418 Msa0515340:intron 25.0%
!! ATTGAAGACTGATTTAATTG+CGG + chr3_4:66570778-66570797 Msa0515340:five_prime_UTR 25.0%
! TATTCACCAGATTAATATGT+GGG + chr3_4:66570877-66570896 Msa0515340:CDS 25.0%
! ATTCTGCTTATTAACCAAAT+TGG + chr3_4:66571032-66571051 Msa0515340:intron 25.0%
! GAACATGAAGAATTTGTATT+CGG + chr3_4:66571156-66571175 Msa0515340:intron 25.0%
! GATTAAATATGCAGATACAA+AGG + chr3_4:66571249-66571268 Msa0515340:intron 25.0%
!! TCTAATAATATGTGTTTTGC+TGG + chr3_4:66571637-66571656 Msa0515340:CDS 25.0%
! TTTCATGCCATAATTGAATA+TGG - chr3_4:66572194-66572213 None:intergenic 25.0%
! TTGATTTAATTGCAGATTCT+TGG + chr3_4:66572247-66572266 Msa0515340:intron 25.0%
! GATAATAAGTTAGTGACAAA+TGG - chr3_4:66572592-66572611 None:intergenic 25.0%
! AAACATACATGATTTGATCA+CGG - chr3_4:66572634-66572653 None:intergenic 25.0%
!!! CAAGCTATTTTTTTCAAAAG+GGG - chr3_4:66572725-66572744 None:intergenic 25.0%
!!! CCAAGCTATTTTTTTCAAAA+GGG - chr3_4:66572726-66572745 None:intergenic 25.0%
!! ATTTTGGATGCATGTATATT+TGG + chr3_4:66573140-66573159 Msa0515340:three_prime_UTR 25.0%
!! GAAATGTGTATTTTTGTGCT+TGG - chr3_4:66569721-66569740 None:intergenic 30.0%
TGTAATGTTATTGGAGAATG+GGG - chr3_4:66569754-66569773 None:intergenic 30.0%
ATAGAAAGTTGAAATGGATG+GGG - chr3_4:66569786-66569805 None:intergenic 30.0%
ATTCTAATTCGAGGAAAACA+AGG + chr3_4:66570127-66570146 Msa0515340:intron 30.0%
AGGAAAACAAGGAAACATAA+CGG + chr3_4:66570138-66570157 Msa0515340:intron 30.0%
CAATCAAAGACAAAAGACAA+AGG - chr3_4:66570243-66570262 None:intergenic 30.0%
!!! ACCTTTTTTTTGTCAGAGAA+AGG + chr3_4:66570274-66570293 Msa0515340:intron 30.0%
TCCTTTCTCTGACAAAAAAA+AGG - chr3_4:66570278-66570297 None:intergenic 30.0%
AGAGAAAGGAAAGAAATAAC+TGG + chr3_4:66570288-66570307 Msa0515340:intron 30.0%
! ACTATGAGTCACTATGATTT+TGG + chr3_4:66570611-66570630 Msa0515340:intron 30.0%
AAGTTTCTGCAAAATCACAA+TGG - chr3_4:66570676-66570695 None:intergenic 30.0%
AAAGTTCCTGCAGTATAAAA+GGG - chr3_4:66570711-66570730 None:intergenic 30.0%
TAAAGTTCCTGCAGTATAAA+AGG - chr3_4:66570712-66570731 None:intergenic 30.0%
TCTATAGCAAACTGCAATTA+AGG - chr3_4:66570753-66570772 None:intergenic 30.0%
!! TTAATTGCAGTTTGCTATAG+AGG + chr3_4:66570752-66570771 Msa0515340:intron 30.0%
CACATATTAATCTGGTGAAT+AGG - chr3_4:66570878-66570897 None:intergenic 30.0%
CTATTCACCAGATTAATATG+TGG + chr3_4:66570876-66570895 Msa0515340:CDS 30.0%
ATTCACCAGATTAATATGTG+GGG + chr3_4:66570878-66570897 Msa0515340:CDS 30.0%
!! CAAAGGTTGATTTGTTTCAT+TGG + chr3_4:66570994-66571013 Msa0515340:intron 30.0%
! GTTTTATAATGCTTAGTCAG+AGG + chr3_4:66571061-66571080 Msa0515340:intron 30.0%
AGCTAATAGACCTATTGATA+AGG + chr3_4:66571130-66571149 Msa0515340:CDS 30.0%
CATGTTCTAACCTTATCAAT+AGG - chr3_4:66571143-66571162 None:intergenic 30.0%
! GATACCATGCTTTCAAATTT+TGG + chr3_4:66571199-66571218 Msa0515340:intron 30.0%
ACATCCAAAATTTGAAAGCA+TGG - chr3_4:66571206-66571225 None:intergenic 30.0%
!!! TTAAAACCTTTTTTCGCAGA+CGG - chr3_4:66571310-66571329 None:intergenic 30.0%
TTTCTATCACTTTATGTCAC+CGG + chr3_4:66571535-66571554 Msa0515340:intron 30.0%
!!! GATGTTTTTTATGTGATGTC+CGG + chr3_4:66571956-66571975 Msa0515340:CDS 30.0%
! GAAAGATTTTTCTTGTGGAT+CGG + chr3_4:66571998-66572017 Msa0515340:CDS 30.0%
GTTATCCATAGAATGATAGA+AGG + chr3_4:66572085-66572104 Msa0515340:intron 30.0%
TGTCTTAATGTGAGAAAGAA+TGG + chr3_4:66572128-66572147 Msa0515340:intron 30.0%
GTCTTAATGTGAGAAAGAAT+GGG + chr3_4:66572129-66572148 Msa0515340:intron 30.0%
TAATGGTTATCAAGAAAGCT+AGG - chr3_4:66572501-66572520 None:intergenic 30.0%
!! CCCTTTTGAAAAAAATAGCT+TGG + chr3_4:66572723-66572742 Msa0515340:intron 30.0%
!!! GCCAAGCTATTTTTTTCAAA+AGG - chr3_4:66572727-66572746 None:intergenic 30.0%
TAAATGAAACGTGATGAGTA+TGG + chr3_4:66572977-66572996 Msa0515340:three_prime_UTR 30.0%
!! ATGAGTATGGTCATTTTCAT+TGG + chr3_4:66572990-66573009 Msa0515340:three_prime_UTR 30.0%
TCAAAACCATATACAATGTG+TGG + chr3_4:66573022-66573041 Msa0515340:three_prime_UTR 30.0%
! AAATTAGTCTGTGTGAAAGT+TGG + chr3_4:66573194-66573213 Msa0515340:three_prime_UTR 30.0%
! TATGAGTCTCTCTTTGAAGA+TGG + chr3_4:66569932-66569951 Msa0515340:five_prime_UTR 35.0%
!!! TCATTAGTTCTGCAGTTTTG+TGG + chr3_4:66569960-66569979 Msa0515340:five_prime_UTR 35.0%
CTCAAATCTTGTTACCAACA+TGG - chr3_4:66570001-66570020 None:intergenic 35.0%
!! TGTTGGTAACAAGATTTGAG+CGG + chr3_4:66570001-66570020 Msa0515340:five_prime_UTR 35.0%
AAGATAGCTGTAGCTTCTAA+AGG + chr3_4:66570032-66570051 Msa0515340:five_prime_UTR 35.0%
ATCCAAACATGCACTAAGAA+GGG - chr3_4:66570569-66570588 None:intergenic 35.0%
TATCCAAACATGCACTAAGA+AGG - chr3_4:66570570-66570589 None:intergenic 35.0%
TTGCAGCTTCAACAAAATCA+CGG + chr3_4:66570647-66570666 Msa0515340:intron 35.0%
! ATGTTACCCTTTTATACTGC+AGG + chr3_4:66570702-66570721 Msa0515340:intron 35.0%
ATCCATTCCCTTAATTGATG+AGG + chr3_4:66570934-66570953 Msa0515340:CDS 35.0%
! CTTGAAGTTTGATAGTAGTC+AGG + chr3_4:66570961-66570980 Msa0515340:CDS 35.0%
AGTCAGGTAAATGTTTGCAA+AGG + chr3_4:66570977-66570996 Msa0515340:intron 35.0%
! CATACTTGTTAGATGTTCCT+AGG - chr3_4:66571103-66571122 None:intergenic 35.0%
TTCCTTTCTCTAATACCTTG+AGG + chr3_4:66571572-66571591 Msa0515340:intron 35.0%
AAAACTGCAGGGAATGTATA+TGG + chr3_4:66571600-66571619 Msa0515340:intron 35.0%
AAACTGCAGGGAATGTATAT+GGG + chr3_4:66571601-66571620 Msa0515340:intron 35.0%
AGTTCTTGCATTGCATTCTA+AGG + chr3_4:66571738-66571757 Msa0515340:intron 35.0%
TTCGATAGATTTCAGCATAG+TGG - chr3_4:66571913-66571932 None:intergenic 35.0%
TTAATGTGAGAAAGAATGGG+AGG + chr3_4:66572132-66572151 Msa0515340:intron 35.0%
TCTGTCAATGGTTCAATCAT+TGG - chr3_4:66572274-66572293 None:intergenic 35.0%
AGGAACTTATATTCCACAGA+TGG + chr3_4:66572420-66572439 Msa0515340:CDS 35.0%
TAGTATGACATGTTGCGAAA+AGG - chr3_4:66572550-66572569 None:intergenic 35.0%
ATGTGTTGTAACAACAATCC+CGG - chr3_4:66572692-66572711 None:intergenic 35.0%
AACTGTGATTCGTGTTTAAC+AGG + chr3_4:66572765-66572784 Msa0515340:intron 35.0%
!!! GTATATGGTTTTGACACTTG+TGG - chr3_4:66573016-66573035 None:intergenic 35.0%
CCTAAACCACACATTGTATA+TGG - chr3_4:66573031-66573050 None:intergenic 35.0%
CCATATACAATGTGTGGTTT+AGG + chr3_4:66573028-66573047 Msa0515340:three_prime_UTR 35.0%
! GACTGCTCATTTTATGCAAT+AGG + chr3_4:66573100-66573119 Msa0515340:three_prime_UTR 35.0%
!! GTTCTGCAGTTTTGTGGTAT+TGG + chr3_4:66569966-66569985 Msa0515340:five_prime_UTR 40.0%
ATTGGTCATCATCACCATGT+TGG + chr3_4:66569984-66570003 Msa0515340:five_prime_UTR 40.0%
!! GTTGGTAACAAGATTTGAGC+GGG + chr3_4:66570002-66570021 Msa0515340:five_prime_UTR 40.0%
GTTTGGATAGACTGTGAGAT+TGG + chr3_4:66570581-66570600 Msa0515340:intron 40.0%
CTTCTCCCCACATATTAATC+TGG - chr3_4:66570886-66570905 None:intergenic 40.0%
CAGATTAATATGTGGGGAGA+AGG + chr3_4:66570884-66570903 Msa0515340:CDS 40.0%
GGAGAAGGCTTCAAAAGTAA+TGG + chr3_4:66570899-66570918 Msa0515340:CDS 40.0%
CATTCCCTTAATTGATGAGG+CGG + chr3_4:66570937-66570956 Msa0515340:CDS 40.0%
AAGTCCGCCTCATCAATTAA+GGG - chr3_4:66570944-66570963 None:intergenic 40.0%
CATTTCTGACATTGCCTTAC+AGG + chr3_4:66571394-66571413 Msa0515340:intron 40.0%
! TCGTTTGAAGTTAGTGCAGT+TGG + chr3_4:66571442-66571461 Msa0515340:CDS 40.0%
AGGAAAAAGAAAGACGATGC+CGG - chr3_4:66571557-66571576 None:intergenic 40.0%
! TGCCTCAAGGTATTAGAGAA+AGG - chr3_4:66571577-66571596 None:intergenic 40.0%
TTGAGGCAACAAAAACTGCA+GGG + chr3_4:66571589-66571608 Msa0515340:intron 40.0%
ATGTCCATACTCCATCTCAA+AGG - chr3_4:66571789-66571808 None:intergenic 40.0%
TTGAGATGGAGTATGGACAT+TGG + chr3_4:66571789-66571808 Msa0515340:CDS 40.0%
TGAGATGGAGTATGGACATT+GGG + chr3_4:66571790-66571809 Msa0515340:CDS 40.0%
!! ATTGGGTTGATGAGCAAAAC+CGG + chr3_4:66571807-66571826 Msa0515340:CDS 40.0%
TTCTCATTTCCGAGATTTGC+CGG - chr3_4:66571829-66571848 None:intergenic 40.0%
GTATTAGTGACATAGAGCTC+AGG + chr3_4:66571864-66571883 Msa0515340:CDS 40.0%
! CGGCTGAAAGATTTTTCTTG+TGG + chr3_4:66571993-66572012 Msa0515340:CDS 40.0%
! AGATTTTTCTTGTGGATCGG+TGG + chr3_4:66572001-66572020 Msa0515340:CDS 40.0%
TCTCGCCTTCTATCATTCTA+TGG - chr3_4:66572093-66572112 None:intergenic 40.0%
AATCGTTGTTGCTCTGTCAA+TGG - chr3_4:66572286-66572305 None:intergenic 40.0%
ATTGACAGAGCAACAACGAT+TGG + chr3_4:66572285-66572304 Msa0515340:CDS 40.0%
CGATTGGATATCGATAACCT+TGG + chr3_4:66572301-66572320 Msa0515340:CDS 40.0%
CTTGTTGACATGATTGTCCA+AGG - chr3_4:66572321-66572340 None:intergenic 40.0%
TTTCTCCATGCCTTGTGAAA+GGG - chr3_4:66572353-66572372 None:intergenic 40.0%
AGAAAGCTAGGTACAATACC+TGG - chr3_4:66572489-66572508 None:intergenic 40.0%
CATGATTTGATCACGGAGTT+CGG - chr3_4:66572627-66572646 None:intergenic 40.0%
TTTAACAGGCTGACCATCTT+CGG + chr3_4:66572779-66572798 Msa0515340:intron 40.0%
AGAATATTTCCAACGCCTGA+GGG + chr3_4:66572873-66572892 Msa0515340:CDS 40.0%
AACAAGACTAAGCAGGTTCT+CGG - chr3_4:66572927-66572946 None:intergenic 40.0%
! TTTCCTGCAGTCTTTTGTTG+TGG + chr3_4:66573062-66573081 Msa0515340:three_prime_UTR 40.0%
TGTTATTGGAGAATGGGGAG+TGG - chr3_4:66569749-66569768 None:intergenic 45.0%
! AGACTGATTTAATTGCGGCG+CGG + chr3_4:66570783-66570802 Msa0515340:five_prime_UTR 45.0%
TCTCGAGGAAACAAACTGTG+CGG - chr3_4:66570837-66570856 None:intergenic 45.0%
! CACAGTTTGTTTCCTCGAGA+AGG + chr3_4:66570837-66570856 Msa0515340:CDS 45.0%
ATACACACTCATCCTTCTCG+AGG - chr3_4:66570852-66570871 None:intergenic 45.0%
CGCCTCATCAATTAAGGGAA+TGG - chr3_4:66570939-66570958 None:intergenic 45.0%
CAAGTCCGCCTCATCAATTA+AGG - chr3_4:66570945-66570964 None:intergenic 45.0%
TAGTCAGAGGATGCTTCTCA+TGG + chr3_4:66571074-66571093 Msa0515340:intron 45.0%
GATGCTTCTCATGGTATCCT+AGG + chr3_4:66571083-66571102 Msa0515340:CDS 45.0%
TAAGAGCCGTCTGCGAAAAA+AGG + chr3_4:66571301-66571320 Msa0515340:CDS 45.0%
! CTGCAGTTTTTGTTGCCTCA+AGG - chr3_4:66571590-66571609 None:intergenic 45.0%
CTTGAGGCAACAAAAACTGC+AGG + chr3_4:66571588-66571607 Msa0515340:intron 45.0%
AGGGAATGTATATGGGTGGT+GGG + chr3_4:66571608-66571627 Msa0515340:intron 45.0%
!! AATGTATATGGGTGGTGGGT+TGG + chr3_4:66571612-66571631 Msa0515340:CDS 45.0%
ACAAACCAACCTGGATTCAC+AGG - chr3_4:66571664-66571683 None:intergenic 45.0%
AGCATCTTCACAAACCAACC+TGG - chr3_4:66571673-66571692 None:intergenic 45.0%
GCTGCAATTCCTACGGATAA+GGG - chr3_4:66571767-66571786 None:intergenic 45.0%
CTCAAAGGCTGCAATTCCTA+CGG - chr3_4:66571774-66571793 None:intergenic 45.0%
! AGGAATTGCAGCCTTTGAGA+TGG + chr3_4:66571775-66571794 Msa0515340:intron 45.0%
TGAGCAAAACCGGCAAATCT+CGG + chr3_4:66571817-66571836 Msa0515340:CDS 45.0%
TTTATGTGATGTCCGGCATG+TGG + chr3_4:66571963-66571982 Msa0515340:CDS 45.0%
TCACCTTGAGAAGCTCAGAA+GGG - chr3_4:66572033-66572052 None:intergenic 45.0%
ATCACCTTGAGAAGCTCAGA+AGG - chr3_4:66572034-66572053 None:intergenic 45.0%
GTTTCTCCATGCCTTGTGAA+AGG - chr3_4:66572354-66572373 None:intergenic 45.0%
GCAGCTGGACAATTCATTGA+AGG + chr3_4:66572400-66572419 Msa0515340:CDS 45.0%
! TCTTGTGAGCTTTGTGAACC+AGG + chr3_4:66572468-66572487 Msa0515340:CDS 45.0%
! TGTTCGCGACATTTGTTGCA+AGG - chr3_4:66572812-66572831 None:intergenic 45.0%
AGCTCGATGTTTGCTTGCTT+TGG + chr3_4:66572849-66572868 Msa0515340:CDS 45.0%
GCTCGATGTTTGCTTGCTTT+GGG + chr3_4:66572850-66572869 Msa0515340:CDS 45.0%
GAGAATATTTCCAACGCCTG+AGG + chr3_4:66572872-66572891 Msa0515340:CDS 45.0%
ACAAGACTAAGCAGGTTCTC+GGG - chr3_4:66572926-66572945 None:intergenic 45.0%
GTCTTGCAACAAGACTAAGC+AGG - chr3_4:66572934-66572953 None:intergenic 45.0%
TCTCCACAACAAAAGACTGC+AGG - chr3_4:66573068-66573087 None:intergenic 45.0%
TATTGGAGAATGGGGAGTGG+TGG - chr3_4:66569746-66569765 None:intergenic 50.0%
GGCCCTTCTTAGTGCATGTT+TGG + chr3_4:66570564-66570583 Msa0515340:intron 50.0%
GACGGCGAATTCATGCTCAA+TGG - chr3_4:66570815-66570834 None:intergenic 50.0%
GAGGAAACAAACTGTGCGGA+CGG - chr3_4:66570833-66570852 None:intergenic 50.0%
CTGCTGCACATAAGCCTGTA+AGG - chr3_4:66571411-66571430 None:intergenic 50.0%
AACGTGTTAGACAGCAGGTG+TGG + chr3_4:66571477-66571496 Msa0515340:intron 50.0%
ACGTGTTAGACAGCAGGTGT+GGG + chr3_4:66571478-66571497 Msa0515340:intron 50.0%
CTGCAGGGAATGTATATGGG+TGG + chr3_4:66571604-66571623 Msa0515340:intron 50.0%
CAGGGAATGTATATGGGTGG+TGG + chr3_4:66571607-66571626 Msa0515340:intron 50.0%
TTTGCTGGACCTGTGAATCC+AGG + chr3_4:66571652-66571671 Msa0515340:CDS 50.0%
CTAAGGACACCCTTATCCGT+AGG + chr3_4:66571755-66571774 Msa0515340:intron 50.0%
GGCTGCAATTCCTACGGATA+AGG - chr3_4:66571768-66571787 None:intergenic 50.0%
!! GCAGCCTTTGAGATGGAGTA+TGG + chr3_4:66571782-66571801 Msa0515340:CDS 50.0%
TGACATAGAGCTCAGGATGC+TGG + chr3_4:66571871-66571890 Msa0515340:CDS 50.0%
GTCCGGCATGTGGAAAACAA+CGG + chr3_4:66571973-66571992 Msa0515340:CDS 50.0%
!! AGCCGTTGTTTTCCACATGC+CGG - chr3_4:66571978-66571997 None:intergenic 50.0%
GCAGAAGATGCCCTTTCACA+AGG + chr3_4:66572340-66572359 Msa0515340:CDS 50.0%
AGATGCCCTTTCACAAGGCA+TGG + chr3_4:66572345-66572364 Msa0515340:CDS 50.0%
CACAAGGCATGGAGAAACTG+CGG + chr3_4:66572356-66572375 Msa0515340:CDS 50.0%
TCCACAGATGGCTACTGCAA+TGG + chr3_4:66572432-66572451 Msa0515340:CDS 50.0%
TCCATTGCAGTAGCCATCTG+TGG - chr3_4:66572436-66572455 None:intergenic 50.0%
GCAAACATCGAGCTGACTGA+CGG - chr3_4:66572843-66572862 None:intergenic 50.0%
ATAGTGAGCTCAAAGCCCTC+AGG - chr3_4:66572891-66572910 None:intergenic 50.0%
!! TGAGGGCTTTGAGCTCACTA+TGG + chr3_4:66572890-66572909 Msa0515340:CDS 50.0%
CAAGACTAAGCAGGTTCTCG+GGG - chr3_4:66572925-66572944 None:intergenic 50.0%
GGCTCTTACGAGCAGCTTCT+CGG - chr3_4:66571289-66571308 None:intergenic 55.0%
GCTCGAACGTGTTAGACAGC+AGG + chr3_4:66571472-66571491 Msa0515340:CDS 55.0%
CGTGTTAGACAGCAGGTGTG+GGG + chr3_4:66571479-66571498 Msa0515340:intron 55.0%
CTGGACCTGTGAATCCAGGT+TGG + chr3_4:66571656-66571675 Msa0515340:intron 55.0%
! GAGCTCAGGATGCTGGTTGA+TGG + chr3_4:66571878-66571897 Msa0515340:CDS 55.0%
TCGCCCTTCTGAGCTTCTCA+AGG + chr3_4:66572027-66572046 Msa0515340:CDS 55.0%
GCAAGGTTTCCTGCCGAAGA+TGG - chr3_4:66572795-66572814 None:intergenic 55.0%
! CTCGCTGATAGCGTAGCAGC+TGG + chr3_4:66572385-66572404 Msa0515340:CDS 60.0%
ACAGGCTGACCATCTTCGGC+AGG + chr3_4:66572783-66572802 Msa0515340:intron 60.0%
AGCTCAAAGCCCTCAGGCGT+TGG - chr3_4:66572885-66572904 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 66569681 66573251 66569681 ID=Msa0515340;Name=Msa0515340
chr3_4 mRNA 66569681 66573251 66569681 ID=Msa0515340-mRNA-1;Parent=Msa0515340;Name=Msa0515340-mRNA-1;_AED=0.14;_eAED=0.14;_QI=432|1|1|1|0.87|0.88|9|312|363
chr3_4 exon 66569681 66570053 66569681 ID=Msa0515340-mRNA-1:exon:17109;Parent=Msa0515340-mRNA-1
chr3_4 exon 66570762 66570982 66570762 ID=Msa0515340-mRNA-1:exon:17110;Parent=Msa0515340-mRNA-1
chr3_4 exon 66571077 66571151 66571077 ID=Msa0515340-mRNA-1:exon:17111;Parent=Msa0515340-mRNA-1
chr3_4 exon 66571263 66571322 66571263 ID=Msa0515340-mRNA-1:exon:17112;Parent=Msa0515340-mRNA-1
chr3_4 exon 66571416 66571493 66571416 ID=Msa0515340-mRNA-1:exon:17113;Parent=Msa0515340-mRNA-1
chr3_4 exon 66571610 66571673 66571610 ID=Msa0515340-mRNA-1:exon:17114;Parent=Msa0515340-mRNA-1
chr3_4 exon 66571777 66572048 66571777 ID=Msa0515340-mRNA-1:exon:17115;Parent=Msa0515340-mRNA-1
chr3_4 exon 66572262 66572489 66572262 ID=Msa0515340-mRNA-1:exon:17116;Parent=Msa0515340-mRNA-1
chr3_4 exon 66572787 66573251 66572787 ID=Msa0515340-mRNA-1:exon:17117;Parent=Msa0515340-mRNA-1
chr3_4 five_prime_UTR 66569681 66570053 66569681 ID=Msa0515340-mRNA-1:five_prime_utr;Parent=Msa0515340-mRNA-1
chr3_4 five_prime_UTR 66570762 66570820 66570762 ID=Msa0515340-mRNA-1:five_prime_utr;Parent=Msa0515340-mRNA-1
chr3_4 CDS 66570821 66570982 66570821 ID=Msa0515340-mRNA-1:cds;Parent=Msa0515340-mRNA-1
chr3_4 CDS 66571077 66571151 66571077 ID=Msa0515340-mRNA-1:cds;Parent=Msa0515340-mRNA-1
chr3_4 CDS 66571263 66571322 66571263 ID=Msa0515340-mRNA-1:cds;Parent=Msa0515340-mRNA-1
chr3_4 CDS 66571416 66571493 66571416 ID=Msa0515340-mRNA-1:cds;Parent=Msa0515340-mRNA-1
chr3_4 CDS 66571610 66571673 66571610 ID=Msa0515340-mRNA-1:cds;Parent=Msa0515340-mRNA-1
chr3_4 CDS 66571777 66572048 66571777 ID=Msa0515340-mRNA-1:cds;Parent=Msa0515340-mRNA-1
chr3_4 CDS 66572262 66572489 66572262 ID=Msa0515340-mRNA-1:cds;Parent=Msa0515340-mRNA-1
chr3_4 CDS 66572787 66572939 66572787 ID=Msa0515340-mRNA-1:cds;Parent=Msa0515340-mRNA-1
chr3_4 three_prime_UTR 66572940 66573251 66572940 ID=Msa0515340-mRNA-1:three_prime_utr;Parent=Msa0515340-mRNA-1
Gene Sequence

>Msa0515340

ATGAATTCGCCGTCCGCACAGTTTGTTTCCTCGAGAAGGATGAGTGTGTATGATCCTATTCACCAGATTAATATGTGGGGAGAAGGCTTCAAAAGTAATGGAAATTTAAGTGCATCCATTCCCTTAATTGATGAGGCGGACTTGAAGTTTGATAGTAGTCAGTCAGAGGATGCTTCTCATGGTATCCTAGGAACATCTAACAAGTATGAGCAAGAAGCTAATAGACCTATTGATAAGATACAAAGGCGTCTTGCACAAAACCGAGAAGCTGCTCGTAAGAGCCGTCTGCGAAAAAAGGCTTATGTGCAGCAGCTAGAATCAAGTCGTTTGAAGTTAGTGCAGTTGGAGCAAGAGCTCGAACGTGTTAGACAGCAGGGAATGTATATGGGTGGTGGGTTGGATTCTAATAATATGTGTTTTGCTGGACCTGTGAATCCAGGAATTGCAGCCTTTGAGATGGAGTATGGACATTGGGTTGATGAGCAAAACCGGCAAATCTCGGAAATGAGAAATGCTTTAAACTCGCGTATTAGTGACATAGAGCTCAGGATGCTGGTTGATGGTATGATGAACCACTATGCTGAAATCTATCGAATGAAATCTGCAGCTGCAAAAACAGATGTTTTTTATGTGATGTCCGGCATGTGGAAAACAACGGCTGAAAGATTTTTCTTGTGGATCGGTGGATTTCGCCCTTCTGAGCTTCTCAAGATTCTTGGTCCAATGATTGAACCATTGACAGAGCAACAACGATTGGATATCGATAACCTTGGACAATCATGTCAACAAGCAGAAGATGCCCTTTCACAAGGCATGGAGAAACTGCGGCAAACACTCGCTGATAGCGTAGCAGCTGGACAATTCATTGAAGGAACTTATATTCCACAGATGGCTACTGCAATGGAGAAGTTAGAAGCTCTTGTGAGCTTTGTGAACCAGGCTGACCATCTTCGGCAGGAAACCTTGCAACAAATGTCGCGAACACTTACAATCCGTCAGTCAGCTCGATGTTTGCTTGCTTTGGGAGAATATTTCCAACGCCTGAGGGCTTTGAGCTCACTATGGTCTAATCGACCCCGAGAACCTGCTTAG

Protein sequence

>Msa0515340

MNSPSAQFVSSRRMSVYDPIHQINMWGEGFKSNGNLSASIPLIDEADLKFDSSQSEDASHGILGTSNKYEQEANRPIDKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLVQLEQELERVRQQGMYMGGGLDSNNMCFAGPVNPGIAAFEMEYGHWVDEQNRQISEMRNALNSRISDIELRMLVDGMMNHYAEIYRMKSAAAKTDVFYVMSGMWKTTAERFFLWIGGFRPSELLKILGPMIEPLTEQQRLDIDNLGQSCQQAEDALSQGMEKLRQTLADSVAAGQFIEGTYIPQMATAMEKLEALVSFVNQADHLRQETLQQMSRTLTIRQSARCLLALGEYFQRLRALSSLWSNRPREPA*