Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0032810 | sp|Q9M9W1|RL222_ARATH | 84.800 | 125 | 18 | 1 | 1 | 125 | 1 | 124 | 3.80e-62 | 188 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002790 | Msa0032810 | 0.812132 | 4.944778e-51 | -8.615850e-47 |
| Msa0007850 | Msa0032810 | 0.817520 | 3.160591e-52 | -8.615850e-47 |
| Msa0022970 | Msa0032810 | 0.806938 | 6.450908e-50 | -8.615850e-47 |
| Msa0027260 | Msa0032810 | 0.804168 | 2.458436e-49 | -8.615850e-47 |
| Msa0032780 | Msa0032810 | 0.809037 | 2.305922e-50 | -8.615850e-47 |
| Msa0032810 | Msa0033880 | 0.801905 | 7.221324e-49 | -8.615850e-47 |
| Msa0032810 | Msa0038090 | 0.810351 | 1.203601e-50 | -8.615850e-47 |
| Msa0032810 | Msa0042280 | 0.820374 | 7.095856e-53 | -8.615850e-47 |
| Msa0032810 | Msa0045730 | 0.846088 | 2.705102e-59 | -8.615850e-47 |
| Msa0032810 | Msa0047160 | 0.829147 | 6.056830e-55 | -8.615850e-47 |
| Msa0032810 | Msa0048180 | 0.845123 | 4.940575e-59 | -8.615850e-47 |
| Msa0032810 | Msa0068020 | 0.822311 | 2.535554e-53 | -8.615850e-47 |
| Msa0032810 | Msa0078360 | 0.803559 | 3.290773e-49 | -8.615850e-47 |
| Msa0032810 | Msa0094470 | 0.808154 | 3.560531e-50 | -8.615850e-47 |
| Msa0032810 | Msa0113240 | 0.807503 | 4.895812e-50 | -8.615850e-47 |
| Msa0032810 | Msa0114570 | 0.821417 | 4.083818e-53 | -8.615850e-47 |
| Msa0032810 | Msa0116130 | 0.852951 | 3.295345e-61 | -8.615850e-47 |
| Msa0032810 | Msa0116670 | 0.838461 | 2.837025e-57 | -8.615850e-47 |
| Msa0032810 | Msa0118710 | 0.846649 | 1.902771e-59 | -8.615850e-47 |
| Msa0032810 | Msa0120880 | 0.830517 | 2.808870e-55 | -8.615850e-47 |
| Msa0032810 | Msa0128860 | 0.824812 | 6.590759e-54 | -8.615850e-47 |
| Msa0032810 | Msa0133540 | 0.848238 | 6.961630e-60 | -8.615850e-47 |
| Msa0032810 | Msa0138890 | 0.807610 | 4.646239e-50 | -8.615850e-47 |
| Msa0032810 | Msa0155320 | 0.810794 | 9.653643e-51 | -8.615850e-47 |
| Msa0032810 | Msa0163760 | 0.826541 | 2.563257e-54 | -8.615850e-47 |
| Msa0032810 | Msa0167480 | 0.846099 | 2.685959e-59 | -8.615850e-47 |
| Msa0032810 | Msa0172930 | 0.875474 | 2.995783e-68 | -8.615850e-47 |
| Msa0032810 | Msa0173530 | 0.836579 | 8.614414e-57 | -8.615850e-47 |
| Msa0032810 | Msa0174730 | 0.820810 | 5.635473e-53 | -8.615850e-47 |
| Msa0032810 | Msa0177960 | 0.825520 | 4.482804e-54 | -8.615850e-47 |
| Msa0032810 | Msa0179030 | 0.818334 | 2.069085e-52 | -8.615850e-47 |
| Msa0032810 | Msa0180020 | 0.863441 | 2.484106e-64 | -8.615850e-47 |
| Msa0032810 | Msa0181490 | 0.837846 | 4.084139e-57 | -8.615850e-47 |
| Msa0032810 | Msa0183900 | 0.804745 | 1.864072e-49 | -8.615850e-47 |
| Msa0032810 | Msa0188350 | 0.817429 | 3.313444e-52 | -8.615850e-47 |
| Msa0032810 | Msa0218830 | 0.845444 | 4.044755e-59 | -8.615850e-47 |
| Msa0032810 | Msa0219120 | 0.885857 | 5.663770e-72 | -8.615850e-47 |
| Msa0032810 | Msa0221030 | 0.825543 | 4.427708e-54 | -8.615850e-47 |
| Msa0032810 | Msa0226460 | 0.800873 | 1.174732e-48 | -8.615850e-47 |
| Msa0032810 | Msa0229150 | 0.811565 | 6.569648e-51 | -8.615850e-47 |
| Msa0032810 | Msa0230490 | 0.874209 | 8.074047e-68 | -8.615850e-47 |
| Msa0032810 | Msa0230520 | 0.887473 | 1.383136e-72 | -8.615850e-47 |
| Msa0032810 | Msa0231100 | 0.864835 | 9.133907e-65 | -8.615850e-47 |
| Msa0032810 | Msa0231710 | 0.824904 | 6.268444e-54 | -8.615850e-47 |
| Msa0032810 | Msa0241830 | 0.801385 | 9.232314e-49 | -8.615850e-47 |
| Msa0032810 | Msa0244780 | 0.803177 | 3.948643e-49 | -8.615850e-47 |
| Msa0032810 | Msa0245580 | 0.813910 | 2.014775e-51 | -8.615850e-47 |
| Msa0032810 | Msa0258850 | 0.880513 | 5.161097e-70 | -8.615850e-47 |
| Msa0032810 | Msa0262480 | 0.854253 | 1.392004e-61 | -8.615850e-47 |
| Msa0032810 | Msa0275360 | 0.811527 | 6.694620e-51 | -8.615850e-47 |
| Msa0032810 | Msa0280370 | 0.810673 | 1.025277e-50 | -8.615850e-47 |
| Msa0032810 | Msa0281530 | 0.822855 | 1.894777e-53 | -8.615850e-47 |
| Msa0032810 | Msa0289580 | 0.833865 | 4.171654e-56 | -8.615850e-47 |
| Msa0032810 | Msa0289610 | 0.841919 | 3.547381e-58 | -8.615850e-47 |
| Msa0032810 | Msa0296250 | 0.871917 | 4.741226e-67 | -8.615850e-47 |
| Msa0032810 | Msa0296790 | 0.801787 | 7.637101e-49 | -8.615850e-47 |
| Msa0032810 | Msa0298200 | 0.878363 | 2.984118e-69 | -8.615850e-47 |
| Msa0032810 | Msa0300350 | 0.836274 | 1.029870e-56 | -8.615850e-47 |
| Msa0032810 | Msa0304590 | 0.820836 | 5.557094e-53 | -8.615850e-47 |
| Msa0032810 | Msa0304660 | 0.825391 | 4.808057e-54 | -8.615850e-47 |
| Msa0032810 | Msa0306690 | 0.854762 | 9.917897e-62 | -8.615850e-47 |
| Msa0032810 | Msa0317910 | 0.840565 | 8.054106e-58 | -8.615850e-47 |
| Msa0032810 | Msa0320590 | 0.810678 | 1.022709e-50 | -8.615850e-47 |
| Msa0032810 | Msa0327300 | 0.837219 | 5.914255e-57 | -8.615850e-47 |
| Msa0032810 | Msa0327330 | 0.801240 | 9.884691e-49 | -8.615850e-47 |
| Msa0032810 | Msa0331700 | 0.827677 | 1.370633e-54 | -8.615850e-47 |
| Msa0032810 | Msa0332640 | 0.845097 | 5.022546e-59 | -8.615850e-47 |
| Msa0032810 | Msa0333190 | 0.807289 | 5.435363e-50 | -8.615850e-47 |
| Msa0032810 | Msa0336010 | 0.812767 | 3.592910e-51 | -8.615850e-47 |
| Msa0032810 | Msa0348830 | 0.887643 | 1.192019e-72 | -8.615850e-47 |
| Msa0032810 | Msa0359040 | 0.826876 | 2.132178e-54 | -8.615850e-47 |
| Msa0032810 | Msa0385500 | 0.805551 | 1.263879e-49 | -8.615850e-47 |
| Msa0032810 | Msa0423750 | 0.859607 | 3.679307e-63 | -8.615850e-47 |
| Msa0032810 | Msa0437020 | 0.856349 | 3.416895e-62 | -8.615850e-47 |
| Msa0032810 | Msa0443390 | 0.890968 | 6.096828e-74 | -8.615850e-47 |
| Msa0032810 | Msa0483110 | 0.800351 | 1.501303e-48 | -8.615850e-47 |
| Msa0032810 | Msa0490820 | 0.842486 | 2.511502e-58 | -8.615850e-47 |
| Msa0032810 | Msa0506400 | 0.802578 | 5.250157e-49 | -8.615850e-47 |
| Msa0032810 | Msa0511770 | 0.805712 | 1.169286e-49 | -8.615850e-47 |
| Msa0032810 | Msa0526540 | 0.828959 | 6.724880e-55 | -8.615850e-47 |
| Msa0032810 | Msa0527150 | 0.844847 | 5.868086e-59 | -8.615850e-47 |
| Msa0032810 | Msa0531650 | 0.864765 | 9.610709e-65 | -8.615850e-47 |
| Msa0032810 | Msa0534750 | 0.912570 | 1.674666e-83 | -8.615850e-47 |
| Msa0032810 | Msa0561430 | 0.802231 | 6.188490e-49 | -8.615850e-47 |
| Msa0032810 | Msa0576940 | 0.825966 | 3.513836e-54 | -8.615850e-47 |
| Msa0032810 | Msa0581110 | 0.826905 | 2.098461e-54 | -8.615850e-47 |
| Msa0032810 | Msa0581280 | 0.810358 | 1.199280e-50 | -8.615850e-47 |
| Msa0032810 | Msa0584260 | 0.857382 | 1.696058e-62 | -8.615850e-47 |
| Msa0032810 | Msa0586420 | 0.827985 | 1.156149e-54 | -8.615850e-47 |
| Msa0032810 | Msa0588360 | 0.814513 | 1.482519e-51 | -8.615850e-47 |
| Msa0032810 | Msa0588630 | -0.852087 | 5.810480e-61 | -8.615850e-47 |
| Msa0032810 | Msa0590940 | 0.858662 | 7.060790e-63 | -8.615850e-47 |
| Msa0032810 | Msa0593700 | 0.810641 | 1.042126e-50 | -8.615850e-47 |
| Msa0032810 | Msa0615580 | 0.905217 | 5.419417e-80 | -8.615850e-47 |
| Msa0032810 | Msa0617540 | 0.819550 | 1.095025e-52 | -8.615850e-47 |
| Msa0032810 | Msa0619860 | 0.809333 | 1.992584e-50 | -8.615850e-47 |
| Msa0032810 | Msa0622750 | 0.802328 | 5.909907e-49 | -8.615850e-47 |
| Msa0032810 | Msa0623200 | 0.853617 | 2.122662e-61 | -8.615850e-47 |
| Msa0032810 | Msa0631250 | 0.834442 | 2.990532e-56 | -8.615850e-47 |
| Msa0032810 | Msa0633570 | 0.812677 | 3.758525e-51 | -8.615850e-47 |
| Msa0032810 | Msa0654870 | 0.809685 | 1.674770e-50 | -8.615850e-47 |
| Msa0032810 | Msa0656410 | 0.805964 | 1.035180e-49 | -8.615850e-47 |
| Msa0032810 | Msa0664560 | 0.814400 | 1.570614e-51 | -8.615850e-47 |
| Msa0032810 | Msa0666230 | 0.874302 | 7.507828e-68 | -8.615850e-47 |
| Msa0032810 | Msa0669520 | 0.808039 | 3.767607e-50 | -8.615850e-47 |
| Msa0032810 | Msa0672100 | 0.823748 | 1.172140e-53 | -8.615850e-47 |
| Msa0032810 | Msa0693210 | 0.806146 | 9.479327e-50 | -8.615850e-47 |
| Msa0032810 | Msa0698780 | 0.834982 | 2.186936e-56 | -8.615850e-47 |
| Msa0032810 | Msa0699190 | 0.852932 | 3.336518e-61 | -8.615850e-47 |
| Msa0032810 | Msa0706500 | 0.819759 | 9.810477e-53 | -8.615850e-47 |
| Msa0032810 | Msa0712610 | 0.807695 | 4.458412e-50 | -8.615850e-47 |
| Msa0032810 | Msa0729200 | 0.878413 | 2.864996e-69 | -8.615850e-47 |
| Msa0032810 | Msa0738100 | 0.813588 | 2.372631e-51 | -8.615850e-47 |
| Msa0032810 | Msa0751010 | 0.807236 | 5.577469e-50 | -8.615850e-47 |
| Msa0032810 | Msa0766080 | 0.858757 | 6.616635e-63 | -8.615850e-47 |
| Msa0032810 | Msa0769590 | 0.882103 | 1.378406e-70 | -8.615850e-47 |
| Msa0032810 | Msa0780930 | 0.802102 | 6.580114e-49 | -8.615850e-47 |
| Msa0032810 | Msa0781080 | 0.855126 | 7.776076e-62 | -8.615850e-47 |
| Msa0032810 | Msa0783630 | 0.801706 | 7.933627e-49 | -8.615850e-47 |
| Msa0032810 | Msa0785130 | 0.855797 | 4.956031e-62 | -8.615850e-47 |
| Msa0032810 | Msa0794050 | 0.808511 | 2.988081e-50 | -8.615850e-47 |
| Msa0032810 | Msa0806880 | 0.886542 | 3.124596e-72 | -8.615850e-47 |
| Msa0032810 | Msa0808800 | 0.820184 | 7.845018e-53 | -8.615850e-47 |
| Msa0032810 | Msa0817540 | 0.836728 | 7.894977e-57 | -8.615850e-47 |
| Msa0032810 | Msa0827380 | 0.825699 | 4.065922e-54 | -8.615850e-47 |
| Msa0032810 | Msa0844220 | -0.800950 | 1.132908e-48 | -8.615850e-47 |
| Msa0032810 | Msa0845550 | 0.858871 | 6.116198e-63 | -8.615850e-47 |
| Msa0032810 | Msa0876170 | 0.800659 | 1.298929e-48 | -8.615850e-47 |
| Msa0032810 | Msa0888810 | 0.833856 | 4.192890e-56 | -8.615850e-47 |
| Msa0032810 | Msa0913240 | 0.827998 | 1.147362e-54 | -8.615850e-47 |
| Msa0032810 | Msa0945480 | 0.837788 | 4.226513e-57 | -8.615850e-47 |
| Msa0032810 | Msa0958000 | 0.815133 | 1.080566e-51 | -8.615850e-47 |
| Msa0032810 | Msa0963020 | 0.823088 | 1.671808e-53 | -8.615850e-47 |
| Msa0032810 | Msa0992550 | 0.805671 | 1.192877e-49 | -8.615850e-47 |
| Msa0032810 | Msa1006840 | 0.813981 | 1.943910e-51 | -8.615850e-47 |
| Msa0032810 | Msa1012740 | 0.833845 | 4.220349e-56 | -8.615850e-47 |
| Msa0032810 | Msa1019240 | 0.862427 | 5.107373e-64 | -8.615850e-47 |
| Msa0032810 | Msa1019260 | 0.856393 | 3.316630e-62 | -8.615850e-47 |
| Msa0032810 | Msa1039520 | 0.808510 | 2.989931e-50 | -8.615850e-47 |
| Msa0032810 | Msa1060260 | 0.820006 | 8.613634e-53 | -8.615850e-47 |
| Msa0032810 | Msa1072710 | 0.853542 | 2.231486e-61 | -8.615850e-47 |
| Msa0032810 | Msa1094380 | 0.859515 | 3.921124e-63 | -8.615850e-47 |
| Msa0032810 | Msa1104140 | 0.819370 | 1.203635e-52 | -8.615850e-47 |
| Msa0032810 | Msa1104210 | 0.860048 | 2.709879e-63 | -8.615850e-47 |
| Msa0032810 | Msa1123770 | 0.823303 | 1.489273e-53 | -8.615850e-47 |
| Msa0032810 | Msa1126830 | 0.831058 | 2.070207e-55 | -8.615850e-47 |
| Msa0032810 | Msa1131560 | 0.841987 | 3.403564e-58 | -8.615850e-47 |
| Msa0032810 | Msa1135890 | 0.817394 | 3.373934e-52 | -8.615850e-47 |
| Msa0032810 | Msa1165780 | 0.866362 | 3.015057e-65 | -8.615850e-47 |
| Msa0032810 | Msa1166870 | 0.866025 | 3.853897e-65 | -8.615850e-47 |
| Msa0032810 | Msa1169910 | 0.810080 | 1.376789e-50 | -8.615850e-47 |
| Msa0032810 | Msa1175350 | 0.845259 | 4.539450e-59 | -8.615850e-47 |
| Msa0032810 | Msa1179950 | 0.829850 | 4.086376e-55 | -8.615850e-47 |
| Msa0032810 | Msa1179980 | 0.843409 | 1.425990e-58 | -8.615850e-47 |
| Msa0032810 | Msa1195300 | 0.871990 | 4.483525e-67 | -8.615850e-47 |
| Msa0032810 | Msa1202580 | 0.839248 | 1.774972e-57 | -8.615850e-47 |
| Msa0032810 | Msa1208020 | 0.809912 | 1.496299e-50 | -8.615850e-47 |
| Msa0032810 | Msa1211770 | 0.842902 | 1.947404e-58 | -8.615850e-47 |
| Msa0032810 | Msa1211830 | 0.815059 | 1.122404e-51 | -8.615850e-47 |
| Msa0032810 | Msa1227690 | 0.805287 | 1.435982e-49 | -8.615850e-47 |
| Msa0032810 | Msa1230580 | 0.827850 | 1.245958e-54 | -8.615850e-47 |
| Msa0032810 | Msa1234830 | 0.829753 | 4.315373e-55 | -8.615850e-47 |
| Msa0032810 | Msa1235610 | 0.816633 | 5.000536e-52 | -8.615850e-47 |
| Msa0032810 | Msa1262890 | 0.849562 | 2.986810e-60 | -8.615850e-47 |
| Msa0032810 | Msa1265630 | 0.829317 | 5.507831e-55 | -8.615850e-47 |
| Msa0032810 | Msa1270620 | 0.840734 | 7.273794e-58 | -8.615850e-47 |
| Msa0032810 | Msa1270690 | 0.843120 | 1.703910e-58 | -8.615850e-47 |
| Msa0032810 | Msa1275680 | 0.845458 | 4.009958e-59 | -8.615850e-47 |
| Msa0032810 | Msa1277260 | 0.822058 | 2.902620e-53 | -8.615850e-47 |
| Msa0032810 | Msa1306990 | 0.813894 | 2.031588e-51 | -8.615850e-47 |
| Msa0032810 | Msa1315890 | 0.864077 | 1.576041e-64 | -8.615850e-47 |
| Msa0032810 | Msa1331710 | 0.810760 | 9.822031e-51 | -8.615850e-47 |
| Msa0032810 | Msa1332250 | 0.821444 | 4.024110e-53 | -8.615850e-47 |
| Msa0032810 | Msa1338190 | 0.807054 | 6.096870e-50 | -8.615850e-47 |
| Msa0032810 | Msa1349570 | 0.858166 | 9.925359e-63 | -8.615850e-47 |
| Msa0032810 | Msa1351540 | 0.837077 | 6.430195e-57 | -8.615850e-47 |
| Msa0032810 | Msa1356790 | 0.805665 | 1.196514e-49 | -8.615850e-47 |
| Msa0032810 | Msa1362790 | 0.851942 | 6.387774e-61 | -8.615850e-47 |
| Msa0032810 | Msa1363330 | 0.824985 | 5.999774e-54 | -8.615850e-47 |
| Msa0032810 | Msa1369190 | 0.858462 | 8.102216e-63 | -8.615850e-47 |
| Msa0032810 | Msa1379760 | 0.825163 | 5.443630e-54 | -8.615850e-47 |
| Msa0032810 | Msa1385720 | 0.818262 | 2.148983e-52 | -8.615850e-47 |
| Msa0032810 | Msa1386600 | 0.825032 | 5.845669e-54 | -8.615850e-47 |
| Msa0032810 | Msa1406080 | 0.856558 | 2.966515e-62 | -8.615850e-47 |
| Msa0032810 | Msa1413500 | 0.877166 | 7.810998e-69 | -8.615850e-47 |
| Msa0032810 | Msa1426370 | 0.836570 | 8.659072e-57 | -8.615850e-47 |
| Msa0032810 | Msa1426490 | 0.822361 | 2.468180e-53 | -8.615850e-47 |
| Msa0032810 | Msa1427560 | 0.842089 | 3.198579e-58 | -8.615850e-47 |
| Msa0032810 | Msa1434090 | 0.820352 | 7.176535e-53 | -8.615850e-47 |
| Msa0032810 | Msa1450280 | 0.848822 | 4.795737e-60 | -8.615850e-47 |
| Msa0032810 | Msa1456050 | 0.810345 | 1.207373e-50 | -8.615850e-47 |
| Msa0032810 | Msa1459960 | 0.802256 | 6.117029e-49 | -8.615850e-47 |
| Msa0032810 | Msa1462860 | 0.813584 | 2.377177e-51 | -8.615850e-47 |
| Msa0032810 | Msa1465260 | 0.845625 | 3.614779e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0032810 | MtrunA17_Chr1g0195471 | 91.597 | 119 | 9 | 1 | 7 | 125 | 2 | 119 | 2.23e-65 | 194 |
| Msa0032810 | MtrunA17_Chr7g0272321 | 94.444 | 108 | 6 | 0 | 18 | 125 | 17 | 124 | 4.39e-62 | 186 |
| Msa0032810 | MtrunA17_Chr1g0192241 | 98.305 | 59 | 1 | 0 | 67 | 125 | 18 | 76 | 2.61e-26 | 93.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0032810 | AT3G05560.1 | 84.800 | 125 | 18 | 1 | 1 | 125 | 1 | 124 | 3.87e-63 | 188 |
| Msa0032810 | AT3G05560.3 | 84.800 | 125 | 18 | 1 | 1 | 125 | 1 | 124 | 3.87e-63 | 188 |
| Msa0032810 | AT3G05560.2 | 84.800 | 125 | 18 | 1 | 1 | 125 | 1 | 124 | 3.87e-63 | 188 |
| Msa0032810 | AT5G27770.1 | 84.694 | 98 | 15 | 0 | 17 | 114 | 16 | 113 | 3.97e-49 | 153 |
| Msa0032810 | AT1G02830.1 | 69.492 | 118 | 33 | 2 | 1 | 116 | 1 | 117 | 8.11e-43 | 137 |
Find 44 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCGCCTTCTATACTCTTTC+TGG | 0.191248 | 1_1:-59940256 | Msa0032810:three_prime_UTR |
| CAGCAGTGGCAGAAGGGATT+AGG | 0.287001 | 1_1:+59941922 | None:intergenic |
| GTGATGCTGTTACTGTTTCC+AGG | 0.305504 | 1_1:-59941571 | Msa0032810:CDS |
| TCTTATGTTAGCTTCTCTTT+TGG | 0.316391 | 1_1:-59940404 | Msa0032810:three_prime_UTR |
| GATCTTGTCTTCCACGGGTT+TGG | 0.336765 | 1_1:+59941664 | None:intergenic |
| GAGAAGCTAACATAAGAAAA+TGG | 0.346112 | 1_1:+59940410 | None:intergenic |
| GTTTCTTCAAGAGAGGATTA+AGG | 0.367162 | 1_1:-59941618 | Msa0032810:CDS |
| TTCTGTTCTCTTGTGGCTAA+AGG | 0.373476 | 1_1:-59941860 | Msa0032810:intron |
| GTTACCAGAAAGAGTATAGA+AGG | 0.386657 | 1_1:+59940252 | None:intergenic |
| AAAACGCGCGTTTCACTTCG+TGG | 0.396594 | 1_1:+59941964 | None:intergenic |
| ACTTGAAGAAACACAATGTA+AGG | 0.413403 | 1_1:-59940567 | Msa0032810:CDS |
| CACGGGTTTGGCACAGTCAA+TGG | 0.421170 | 1_1:+59941676 | None:intergenic |
| AGCAGTGGCAGAAGGGATTA+GGG | 0.424030 | 1_1:+59941923 | None:intergenic |
| GGTGGTAAACCTGGTGCTCT+TGG | 0.432206 | 1_1:-59941593 | Msa0032810:CDS |
| GGCAGAAGGGATTAGGGTAT+AGG | 0.432402 | 1_1:+59941929 | None:intergenic |
| GTCCATGATCTTGTCTTCCA+CGG | 0.443029 | 1_1:+59941658 | None:intergenic |
| ATGCTCGAGACATGTTGCTT+TGG | 0.463943 | 1_1:-59940374 | Msa0032810:three_prime_UTR |
| AAAATAATCTTAGACATTCA+AGG | 0.465501 | 1_1:+59940224 | None:intergenic |
| AAGGGATTAGGGTATAGGTT+TGG | 0.481938 | 1_1:+59941934 | None:intergenic |
| TGTTCTGTTCTGTTCTCTTG+TGG | 0.495042 | 1_1:-59941867 | Msa0032810:five_prime_UTR |
| ATTAAGGTTGGTGGTAAACC+TGG | 0.503896 | 1_1:-59941602 | Msa0032810:CDS |
| GTAGATGCAGCTGGTTCAAA+GGG | 0.506848 | 1_1:-59941725 | Msa0032810:CDS |
| TGGTTCAAAGGGAAAGAAGA+AGG | 0.510234 | 1_1:-59941714 | Msa0032810:CDS |
| CTGATAGCAACTTCTCCAAA+CGG | 0.520527 | 1_1:-59941523 | Msa0032810:intron |
| AGAAACACAATGTAAGGGAT+TGG | 0.522187 | 1_1:-59940561 | Msa0032810:CDS |
| TCCATGATCTTGTCTTCCAC+GGG | 0.522466 | 1_1:+59941659 | None:intergenic |
| TCGAAAAGTTTCTTCAAGAG+AGG | 0.523656 | 1_1:-59941625 | Msa0032810:CDS |
| CAAGAGAGGATTAAGGTTGG+TGG | 0.536618 | 1_1:-59941611 | Msa0032810:CDS |
| AGTAGATGCAGCTGGTTCAA+AGG | 0.536758 | 1_1:-59941726 | Msa0032810:CDS |
| TTCAACATTGCTGAGAATGA+AGG | 0.551218 | 1_1:-59940487 | Msa0032810:CDS |
| ACCCGTGGAAGACAAGATCA+TGG | 0.560910 | 1_1:-59941660 | Msa0032810:CDS |
| AAATGGACAGCAGTGGCAGA+AGG | 0.564137 | 1_1:+59941915 | None:intergenic |
| CTTCAAGAGAGGATTAAGGT+TGG | 0.564429 | 1_1:-59941614 | Msa0032810:CDS |
| ATGGGTCGAGTAGATGCAGC+TGG | 0.584016 | 1_1:-59941734 | Msa0032810:CDS |
| CAGAACACAGCACAATGTGA+AGG | 0.593257 | 1_1:+59941888 | None:intergenic |
| AATGGACAGCAGTGGCAGAA+GGG | 0.600168 | 1_1:+59941916 | None:intergenic |
| ACAGCATCACCAAGAGCACC+AGG | 0.602480 | 1_1:+59941584 | None:intergenic |
| ATAGAAATGTTTATGAGCTG+AGG | 0.605170 | 1_1:-59940513 | Msa0032810:CDS |
| TGATGCTGTTACTGTTTCCA+GGG | 0.614918 | 1_1:-59941570 | Msa0032810:CDS |
| AGAACACAGCACAATGTGAA+GGG | 0.618440 | 1_1:+59941889 | None:intergenic |
| GGTTCAAAGGGAAAGAAGAA+GGG | 0.618619 | 1_1:-59941713 | Msa0032810:CDS |
| CATTGACTGTGCCAAACCCG+TGG | 0.627134 | 1_1:-59941675 | Msa0032810:CDS |
| CTTGAAGAAACACAATGTAA+GGG | 0.629064 | 1_1:-59940566 | Msa0032810:CDS |
| CATTGCTGAGAATGAAGGAG+AGG | 0.630620 | 1_1:-59940482 | Msa0032810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGATTAATTGAAATGAAA+GGG | + | chr1_1:59940384-59940403 | None:intergenic | 15.0% |
| !! | TTATGATTAATTGAAATGAA+AGG | + | chr1_1:59940385-59940404 | None:intergenic | 15.0% |
| !!! | GGATAATTTTTTTGAAAATA+AGG | + | chr1_1:59941411-59941430 | None:intergenic | 15.0% |
| !! | TATGATTAATTGAAATGAAA+GGG | + | chr1_1:59940384-59940403 | None:intergenic | 15.0% |
| !! | TTATGATTAATTGAAATGAA+AGG | + | chr1_1:59940385-59940404 | None:intergenic | 15.0% |
| !!! | GGATAATTTTTTTGAAAATA+AGG | + | chr1_1:59941411-59941430 | None:intergenic | 15.0% |
| !! | ATGATTAATTGAAATGAAAG+GGG | + | chr1_1:59940383-59940402 | None:intergenic | 20.0% |
| !!! | AGTTTTTTGTTTTGTTTGAT+TGG | - | chr1_1:59940746-59940765 | Msa0032810:intron | 20.0% |
| !!! | ATTTAGGTTGTTTTTTATGA+TGG | - | chr1_1:59940807-59940826 | Msa0032810:intron | 20.0% |
| !!! | AGTGTTAAAATTGATTCTAA+AGG | + | chr1_1:59941012-59941031 | None:intergenic | 20.0% |
| !!! | TGATTTTGTAAAACTAATGT+TGG | + | chr1_1:59941078-59941097 | None:intergenic | 20.0% |
| !!! | TTATGTTAACTTTTGATTCA+TGG | - | chr1_1:59941256-59941275 | Msa0032810:intron | 20.0% |
| !!! | CCAATAATATTAGAAGTTTT+TGG | + | chr1_1:59941322-59941341 | None:intergenic | 20.0% |
| !! | CCAAAAACTTCTAATATTAT+TGG | - | chr1_1:59941319-59941338 | Msa0032810:intron | 20.0% |
| !!! | TTTTGTTCAATTAAGAATTG+TGG | - | chr1_1:59941872-59941891 | Msa0032810:five_prime_UTR | 20.0% |
| !! | AAAATAATCTTAGACATTCA+AGG | + | chr1_1:59941979-59941998 | None:intergenic | 20.0% |
| !! | ATGATTAATTGAAATGAAAG+GGG | + | chr1_1:59940383-59940402 | None:intergenic | 20.0% |
| !!! | AGTTTTTTGTTTTGTTTGAT+TGG | - | chr1_1:59940746-59940765 | Msa0032810:intron | 20.0% |
| !!! | ATTTAGGTTGTTTTTTATGA+TGG | - | chr1_1:59940807-59940826 | Msa0032810:intron | 20.0% |
| !!! | AGTGTTAAAATTGATTCTAA+AGG | + | chr1_1:59941012-59941031 | None:intergenic | 20.0% |
| !!! | TGATTTTGTAAAACTAATGT+TGG | + | chr1_1:59941078-59941097 | None:intergenic | 20.0% |
| !!! | TTATGTTAACTTTTGATTCA+TGG | - | chr1_1:59941256-59941275 | Msa0032810:intron | 20.0% |
| !!! | CCAATAATATTAGAAGTTTT+TGG | + | chr1_1:59941322-59941341 | None:intergenic | 20.0% |
| !! | CCAAAAACTTCTAATATTAT+TGG | - | chr1_1:59941319-59941338 | Msa0032810:intron | 20.0% |
| !!! | TTTTGTTCAATTAAGAATTG+TGG | - | chr1_1:59941872-59941891 | Msa0032810:five_prime_UTR | 20.0% |
| !! | AAAATAATCTTAGACATTCA+AGG | + | chr1_1:59941979-59941998 | None:intergenic | 20.0% |
| ! | TCATTCATAGAAGACAAAAA+TGG | - | chr1_1:59940447-59940466 | Msa0032810:three_prime_UTR | 25.0% |
| ! | CATTCATAGAAGACAAAAAT+GGG | - | chr1_1:59940448-59940467 | Msa0032810:three_prime_UTR | 25.0% |
| !!! | TTTTTGTTTTGTTTGATTGG+AGG | - | chr1_1:59940749-59940768 | Msa0032810:intron | 25.0% |
| !! | GGAATTCAATTGTTTGATTT+AGG | - | chr1_1:59940791-59940810 | Msa0032810:intron | 25.0% |
| !! | TAAAATTGATTCTAAAGGTG+TGG | + | chr1_1:59941007-59941026 | None:intergenic | 25.0% |
| !!! | AATTTTAACACTACTAGAAG+CGG | - | chr1_1:59941020-59941039 | Msa0032810:intron | 25.0% |
| !!! | ATTGATTTTACAATCTCGTT+TGG | - | chr1_1:59941141-59941160 | Msa0032810:intron | 25.0% |
| !! | TTGATTTTACAATCTCGTTT+GGG | - | chr1_1:59941142-59941161 | Msa0032810:intron | 25.0% |
| !! | ATATTATTGGCAATTTTGTG+TGG | - | chr1_1:59941332-59941351 | Msa0032810:intron | 25.0% |
| !! | TATTATTGGCAATTTTGTGT+GGG | - | chr1_1:59941333-59941352 | Msa0032810:intron | 25.0% |
| ! | TCATTCATAGAAGACAAAAA+TGG | - | chr1_1:59940447-59940466 | Msa0032810:three_prime_UTR | 25.0% |
| ! | CATTCATAGAAGACAAAAAT+GGG | - | chr1_1:59940448-59940467 | Msa0032810:three_prime_UTR | 25.0% |
| !!! | TTTTTGTTTTGTTTGATTGG+AGG | - | chr1_1:59940749-59940768 | Msa0032810:intron | 25.0% |
| !! | GGAATTCAATTGTTTGATTT+AGG | - | chr1_1:59940791-59940810 | Msa0032810:intron | 25.0% |
| !! | TAAAATTGATTCTAAAGGTG+TGG | + | chr1_1:59941007-59941026 | None:intergenic | 25.0% |
| !!! | AATTTTAACACTACTAGAAG+CGG | - | chr1_1:59941020-59941039 | Msa0032810:intron | 25.0% |
| !!! | ATTGATTTTACAATCTCGTT+TGG | - | chr1_1:59941141-59941160 | Msa0032810:intron | 25.0% |
| !! | TTGATTTTACAATCTCGTTT+GGG | - | chr1_1:59941142-59941161 | Msa0032810:intron | 25.0% |
| !! | ATATTATTGGCAATTTTGTG+TGG | - | chr1_1:59941332-59941351 | Msa0032810:intron | 25.0% |
| !! | TATTATTGGCAATTTTGTGT+GGG | - | chr1_1:59941333-59941352 | Msa0032810:intron | 25.0% |
| AATTGAAATGAAAGGGGAAA+AGG | + | chr1_1:59940377-59940396 | None:intergenic | 30.0% | |
| TCGAGATTCAATTTCAGTTT+CGG | + | chr1_1:59940420-59940439 | None:intergenic | 30.0% | |
| AAGAATAGAGAATAACCGTT+TGG | + | chr1_1:59940695-59940714 | None:intergenic | 30.0% | |
| ! | GGATTTGTGTTTTCTTAGTT+AGG | - | chr1_1:59940770-59940789 | Msa0032810:intron | 30.0% |
| !!! | TGTTTTTTATGATGGTTCTG+CGG | - | chr1_1:59940815-59940834 | Msa0032810:intron | 30.0% |
| TCCGATTAAAAGTTAGTTGT+AGG | - | chr1_1:59940866-59940885 | Msa0032810:intron | 30.0% | |
| ! | CCCTACAACTAACTTTTAAT+CGG | + | chr1_1:59940870-59940889 | None:intergenic | 30.0% |
| CCGATTAAAAGTTAGTTGTA+GGG | - | chr1_1:59940867-59940886 | Msa0032810:intron | 30.0% | |
| !!! | AATGTGTGTGTTTGGTTTTA+GGG | + | chr1_1:59941124-59941143 | None:intergenic | 30.0% |
| GTAAAATCAATGTGTGTGTT+TGG | + | chr1_1:59941132-59941151 | None:intergenic | 30.0% | |
| TTCATGGAATATACAATCTC+TGG | - | chr1_1:59941272-59941291 | Msa0032810:intron | 30.0% | |
| TCATGGAATATACAATCTCT+GGG | - | chr1_1:59941273-59941292 | Msa0032810:intron | 30.0% | |
| ! | ATTATTGGCAATTTTGTGTG+GGG | - | chr1_1:59941334-59941353 | Msa0032810:intron | 30.0% |
| TTCTGTCTAAATTGCAATGA+TGG | - | chr1_1:59941362-59941381 | Msa0032810:intron | 30.0% | |
| TCTGTCTAAATTGCAATGAT+GGG | - | chr1_1:59941363-59941382 | Msa0032810:intron | 30.0% | |
| ! | ACACAGTTTTTGTGATCTAA+AGG | - | chr1_1:59941546-59941565 | Msa0032810:CDS | 30.0% |
| ACGAGTTGTTAAAAAAAGCA+TGG | + | chr1_1:59941577-59941596 | None:intergenic | 30.0% | |
| ! | GTGTTTCTTCAAGTACTTTT+TGG | + | chr1_1:59941627-59941646 | None:intergenic | 30.0% |
| ACTTGAAGAAACACAATGTA+AGG | - | chr1_1:59941633-59941652 | Msa0032810:CDS | 30.0% | |
| CTTGAAGAAACACAATGTAA+GGG | - | chr1_1:59941634-59941653 | Msa0032810:CDS | 30.0% | |
| ATAGAAATGTTTATGAGCTG+AGG | - | chr1_1:59941687-59941706 | Msa0032810:CDS | 30.0% | |
| GAGAAGCTAACATAAGAAAA+TGG | + | chr1_1:59941793-59941812 | None:intergenic | 30.0% | |
| !! | TCTTATGTTAGCTTCTCTTT+TGG | - | chr1_1:59941796-59941815 | Msa0032810:intron | 30.0% |
| ! | AATTGTGGTAACACTTTTGT+TGG | - | chr1_1:59941887-59941906 | Msa0032810:five_prime_UTR | 30.0% |
| AATTGAAATGAAAGGGGAAA+AGG | + | chr1_1:59940377-59940396 | None:intergenic | 30.0% | |
| TCGAGATTCAATTTCAGTTT+CGG | + | chr1_1:59940420-59940439 | None:intergenic | 30.0% | |
| AAGAATAGAGAATAACCGTT+TGG | + | chr1_1:59940695-59940714 | None:intergenic | 30.0% | |
| ! | GGATTTGTGTTTTCTTAGTT+AGG | - | chr1_1:59940770-59940789 | Msa0032810:intron | 30.0% |
| !!! | TGTTTTTTATGATGGTTCTG+CGG | - | chr1_1:59940815-59940834 | Msa0032810:intron | 30.0% |
| TCCGATTAAAAGTTAGTTGT+AGG | - | chr1_1:59940866-59940885 | Msa0032810:intron | 30.0% | |
| ! | CCCTACAACTAACTTTTAAT+CGG | + | chr1_1:59940870-59940889 | None:intergenic | 30.0% |
| CCGATTAAAAGTTAGTTGTA+GGG | - | chr1_1:59940867-59940886 | Msa0032810:intron | 30.0% | |
| !!! | AATGTGTGTGTTTGGTTTTA+GGG | + | chr1_1:59941124-59941143 | None:intergenic | 30.0% |
| GTAAAATCAATGTGTGTGTT+TGG | + | chr1_1:59941132-59941151 | None:intergenic | 30.0% | |
| TTCATGGAATATACAATCTC+TGG | - | chr1_1:59941272-59941291 | Msa0032810:intron | 30.0% | |
| TCATGGAATATACAATCTCT+GGG | - | chr1_1:59941273-59941292 | Msa0032810:intron | 30.0% | |
| ! | ATTATTGGCAATTTTGTGTG+GGG | - | chr1_1:59941334-59941353 | Msa0032810:intron | 30.0% |
| TTCTGTCTAAATTGCAATGA+TGG | - | chr1_1:59941362-59941381 | Msa0032810:intron | 30.0% | |
| TCTGTCTAAATTGCAATGAT+GGG | - | chr1_1:59941363-59941382 | Msa0032810:intron | 30.0% | |
| ! | ACACAGTTTTTGTGATCTAA+AGG | - | chr1_1:59941546-59941565 | Msa0032810:CDS | 30.0% |
| ACGAGTTGTTAAAAAAAGCA+TGG | + | chr1_1:59941577-59941596 | None:intergenic | 30.0% | |
| ! | GTGTTTCTTCAAGTACTTTT+TGG | + | chr1_1:59941627-59941646 | None:intergenic | 30.0% |
| ACTTGAAGAAACACAATGTA+AGG | - | chr1_1:59941633-59941652 | Msa0032810:CDS | 30.0% | |
| CTTGAAGAAACACAATGTAA+GGG | - | chr1_1:59941634-59941653 | Msa0032810:CDS | 30.0% | |
| ATAGAAATGTTTATGAGCTG+AGG | - | chr1_1:59941687-59941706 | Msa0032810:CDS | 30.0% | |
| GAGAAGCTAACATAAGAAAA+TGG | + | chr1_1:59941793-59941812 | None:intergenic | 30.0% | |
| !! | TCTTATGTTAGCTTCTCTTT+TGG | - | chr1_1:59941796-59941815 | Msa0032810:intron | 30.0% |
| ! | AATTGTGGTAACACTTTTGT+TGG | - | chr1_1:59941887-59941906 | Msa0032810:five_prime_UTR | 30.0% |
| CACAATGTGAAGGGAAAAAA+TGG | + | chr1_1:59940305-59940324 | None:intergenic | 35.0% | |
| AGATTCAATTTCAGTTTCGG+TGG | + | chr1_1:59940417-59940436 | None:intergenic | 35.0% | |
| TCGAAAAGTTTCTTCAAGAG+AGG | - | chr1_1:59940575-59940594 | Msa0032810:CDS | 35.0% | |
| GTTTCTTCAAGAGAGGATTA+AGG | - | chr1_1:59940582-59940601 | Msa0032810:CDS | 35.0% | |
| !!! | AGTAATCTTGCTTTTTTCCC+TGG | + | chr1_1:59940650-59940669 | None:intergenic | 35.0% |
| TGAATTGAAGATGGTAGGTT+TGG | + | chr1_1:59941048-59941067 | None:intergenic | 35.0% | |
| AAGAGTGAATTGAAGATGGT+AGG | + | chr1_1:59941053-59941072 | None:intergenic | 35.0% | |
| TACCATCTTCAATTCACTCT+TGG | - | chr1_1:59941052-59941071 | Msa0032810:intron | 35.0% | |
| !!! | CAATGTGTGTGTTTGGTTTT+AGG | + | chr1_1:59941125-59941144 | None:intergenic | 35.0% |
| ! | ATTTTACAATCTCGTTTGGG+TGG | - | chr1_1:59941145-59941164 | Msa0032810:intron | 35.0% |
| CATATTGCGATGATGCTAAA+AGG | + | chr1_1:59941197-59941216 | None:intergenic | 35.0% | |
| AAATTATCCCCTGCTTCAAA+AGG | - | chr1_1:59941422-59941441 | Msa0032810:intron | 35.0% | |
| !!! | AACAAAAGCCTTTTGAAGCA+GGG | + | chr1_1:59941433-59941452 | None:intergenic | 35.0% |
| TGCAATTGTTCGTATTCAGA+TGG | - | chr1_1:59941456-59941475 | Msa0032810:intron | 35.0% | |
| GCAATTGTTCGTATTCAGAT+GGG | - | chr1_1:59941457-59941476 | Msa0032810:intron | 35.0% | |
| CAATTGTTCGTATTCAGATG+GGG | - | chr1_1:59941458-59941477 | Msa0032810:intron | 35.0% | |
| TTAACAACTCGTATTGTTCC+AGG | - | chr1_1:59941585-59941604 | Msa0032810:CDS | 35.0% | |
| AGAAACACAATGTAAGGGAT+TGG | - | chr1_1:59941639-59941658 | Msa0032810:CDS | 35.0% | |
| TTCAACATTGCTGAGAATGA+AGG | - | chr1_1:59941713-59941732 | Msa0032810:CDS | 35.0% | |
| ! | TGGTAACACTTTTGTTGGAA+TGG | - | chr1_1:59941892-59941911 | Msa0032810:five_prime_UTR | 35.0% |
| ! | GTTACCAGAAAGAGTATAGA+AGG | + | chr1_1:59941951-59941970 | None:intergenic | 35.0% |
| CACAATGTGAAGGGAAAAAA+TGG | + | chr1_1:59940305-59940324 | None:intergenic | 35.0% | |
| AGATTCAATTTCAGTTTCGG+TGG | + | chr1_1:59940417-59940436 | None:intergenic | 35.0% | |
| TCGAAAAGTTTCTTCAAGAG+AGG | - | chr1_1:59940575-59940594 | Msa0032810:CDS | 35.0% | |
| GTTTCTTCAAGAGAGGATTA+AGG | - | chr1_1:59940582-59940601 | Msa0032810:CDS | 35.0% | |
| !!! | AGTAATCTTGCTTTTTTCCC+TGG | + | chr1_1:59940650-59940669 | None:intergenic | 35.0% |
| TGAATTGAAGATGGTAGGTT+TGG | + | chr1_1:59941048-59941067 | None:intergenic | 35.0% | |
| AAGAGTGAATTGAAGATGGT+AGG | + | chr1_1:59941053-59941072 | None:intergenic | 35.0% | |
| TACCATCTTCAATTCACTCT+TGG | - | chr1_1:59941052-59941071 | Msa0032810:intron | 35.0% | |
| !!! | CAATGTGTGTGTTTGGTTTT+AGG | + | chr1_1:59941125-59941144 | None:intergenic | 35.0% |
| ! | ATTTTACAATCTCGTTTGGG+TGG | - | chr1_1:59941145-59941164 | Msa0032810:intron | 35.0% |
| CATATTGCGATGATGCTAAA+AGG | + | chr1_1:59941197-59941216 | None:intergenic | 35.0% | |
| AAATTATCCCCTGCTTCAAA+AGG | - | chr1_1:59941422-59941441 | Msa0032810:intron | 35.0% | |
| !!! | AACAAAAGCCTTTTGAAGCA+GGG | + | chr1_1:59941433-59941452 | None:intergenic | 35.0% |
| TGCAATTGTTCGTATTCAGA+TGG | - | chr1_1:59941456-59941475 | Msa0032810:intron | 35.0% | |
| GCAATTGTTCGTATTCAGAT+GGG | - | chr1_1:59941457-59941476 | Msa0032810:intron | 35.0% | |
| CAATTGTTCGTATTCAGATG+GGG | - | chr1_1:59941458-59941477 | Msa0032810:intron | 35.0% | |
| TTAACAACTCGTATTGTTCC+AGG | - | chr1_1:59941585-59941604 | Msa0032810:CDS | 35.0% | |
| AGAAACACAATGTAAGGGAT+TGG | - | chr1_1:59941639-59941658 | Msa0032810:CDS | 35.0% | |
| TTCAACATTGCTGAGAATGA+AGG | - | chr1_1:59941713-59941732 | Msa0032810:CDS | 35.0% | |
| ! | TGGTAACACTTTTGTTGGAA+TGG | - | chr1_1:59941892-59941911 | Msa0032810:five_prime_UTR | 35.0% |
| ! | GTTACCAGAAAGAGTATAGA+AGG | + | chr1_1:59941951-59941970 | None:intergenic | 35.0% |
| AAGGGATTAGGGTATAGGTT+TGG | + | chr1_1:59940269-59940288 | None:intergenic | 40.0% | |
| AGAACACAGCACAATGTGAA+GGG | + | chr1_1:59940314-59940333 | None:intergenic | 40.0% | |
| TGTTCTGTTCTGTTCTCTTG+TGG | - | chr1_1:59940333-59940352 | Msa0032810:three_prime_UTR | 40.0% | |
| TTCTGTTCTCTTGTGGCTAA+AGG | - | chr1_1:59940340-59940359 | Msa0032810:three_prime_UTR | 40.0% | |
| TGGTTCAAAGGGAAAGAAGA+AGG | - | chr1_1:59940486-59940505 | Msa0032810:CDS | 40.0% | |
| GGTTCAAAGGGAAAGAAGAA+GGG | - | chr1_1:59940487-59940506 | Msa0032810:CDS | 40.0% | |
| CTTCAAGAGAGGATTAAGGT+TGG | - | chr1_1:59940586-59940605 | Msa0032810:CDS | 40.0% | |
| !! | ATTAAGGTTGGTGGTAAACC+TGG | - | chr1_1:59940598-59940617 | Msa0032810:intron | 40.0% |
| TGATGCTGTTACTGTTTCCA+GGG | - | chr1_1:59940630-59940649 | Msa0032810:intron | 40.0% | |
| CTGATAGCAACTTCTCCAAA+CGG | - | chr1_1:59940677-59940696 | Msa0032810:intron | 40.0% | |
| ! | TAGGGAAAGTGACTTGTGTT+TGG | - | chr1_1:59940885-59940904 | Msa0032810:intron | 40.0% |
| GTTTGGGTGGTATTCAAAAC+TGG | - | chr1_1:59941158-59941177 | Msa0032810:intron | 40.0% | |
| !!! | ACAAAAGCCTTTTGAAGCAG+GGG | + | chr1_1:59941432-59941451 | None:intergenic | 40.0% |
| !!! | CAACAAAAGCCTTTTGAAGC+AGG | + | chr1_1:59941434-59941453 | None:intergenic | 40.0% |
| ATCAGTCTGTCTTCAACATC+TGG | - | chr1_1:59941509-59941528 | Msa0032810:intron | 40.0% | |
| GGTCAAATACTTGAGATACC+TGG | + | chr1_1:59941606-59941625 | None:intergenic | 40.0% | |
| !! | GTTAGCTTCTCTTTTGGCTA+TGG | - | chr1_1:59941802-59941821 | Msa0032810:intron | 40.0% |
| AAGGGATTAGGGTATAGGTT+TGG | + | chr1_1:59940269-59940288 | None:intergenic | 40.0% | |
| AGAACACAGCACAATGTGAA+GGG | + | chr1_1:59940314-59940333 | None:intergenic | 40.0% | |
| TGTTCTGTTCTGTTCTCTTG+TGG | - | chr1_1:59940333-59940352 | Msa0032810:three_prime_UTR | 40.0% | |
| TTCTGTTCTCTTGTGGCTAA+AGG | - | chr1_1:59940340-59940359 | Msa0032810:three_prime_UTR | 40.0% | |
| TGGTTCAAAGGGAAAGAAGA+AGG | - | chr1_1:59940486-59940505 | Msa0032810:CDS | 40.0% | |
| GGTTCAAAGGGAAAGAAGAA+GGG | - | chr1_1:59940487-59940506 | Msa0032810:CDS | 40.0% | |
| CTTCAAGAGAGGATTAAGGT+TGG | - | chr1_1:59940586-59940605 | Msa0032810:CDS | 40.0% | |
| !! | ATTAAGGTTGGTGGTAAACC+TGG | - | chr1_1:59940598-59940617 | Msa0032810:intron | 40.0% |
| TGATGCTGTTACTGTTTCCA+GGG | - | chr1_1:59940630-59940649 | Msa0032810:intron | 40.0% | |
| CTGATAGCAACTTCTCCAAA+CGG | - | chr1_1:59940677-59940696 | Msa0032810:intron | 40.0% | |
| ! | TAGGGAAAGTGACTTGTGTT+TGG | - | chr1_1:59940885-59940904 | Msa0032810:intron | 40.0% |
| GTTTGGGTGGTATTCAAAAC+TGG | - | chr1_1:59941158-59941177 | Msa0032810:intron | 40.0% | |
| !!! | ACAAAAGCCTTTTGAAGCAG+GGG | + | chr1_1:59941432-59941451 | None:intergenic | 40.0% |
| !!! | CAACAAAAGCCTTTTGAAGC+AGG | + | chr1_1:59941434-59941453 | None:intergenic | 40.0% |
| ATCAGTCTGTCTTCAACATC+TGG | - | chr1_1:59941509-59941528 | Msa0032810:intron | 40.0% | |
| GGTCAAATACTTGAGATACC+TGG | + | chr1_1:59941606-59941625 | None:intergenic | 40.0% | |
| !! | GTTAGCTTCTCTTTTGGCTA+TGG | - | chr1_1:59941802-59941821 | Msa0032810:intron | 40.0% |
| AGGGAAAAAATGGACAGCAG+TGG | + | chr1_1:59940295-59940314 | None:intergenic | 45.0% | |
| CAGAACACAGCACAATGTGA+AGG | + | chr1_1:59940315-59940334 | None:intergenic | 45.0% | |
| ! | AGTAGATGCAGCTGGTTCAA+AGG | - | chr1_1:59940474-59940493 | Msa0032810:CDS | 45.0% |
| ! | GTAGATGCAGCTGGTTCAAA+GGG | - | chr1_1:59940475-59940494 | Msa0032810:CDS | 45.0% |
| TCCATGATCTTGTCTTCCAC+GGG | + | chr1_1:59940544-59940563 | None:intergenic | 45.0% | |
| GTCCATGATCTTGTCTTCCA+CGG | + | chr1_1:59940545-59940564 | None:intergenic | 45.0% | |
| CAAGAGAGGATTAAGGTTGG+TGG | - | chr1_1:59940589-59940608 | Msa0032810:CDS | 45.0% | |
| GTGATGCTGTTACTGTTTCC+AGG | - | chr1_1:59940629-59940648 | Msa0032810:intron | 45.0% | |
| GGCCAAGAGTGAATTGAAGA+TGG | + | chr1_1:59941057-59941076 | None:intergenic | 45.0% | |
| CATTGCTGAGAATGAAGGAG+AGG | - | chr1_1:59941718-59941737 | Msa0032810:CDS | 45.0% | |
| ! | ATGCTCGAGACATGTTGCTT+TGG | - | chr1_1:59941826-59941845 | Msa0032810:intron | 45.0% |
| AGCGCCTTCTATACTCTTTC+TGG | - | chr1_1:59941944-59941963 | Msa0032810:five_prime_UTR | 45.0% | |
| AGGGAAAAAATGGACAGCAG+TGG | + | chr1_1:59940295-59940314 | None:intergenic | 45.0% | |
| CAGAACACAGCACAATGTGA+AGG | + | chr1_1:59940315-59940334 | None:intergenic | 45.0% | |
| ! | AGTAGATGCAGCTGGTTCAA+AGG | - | chr1_1:59940474-59940493 | Msa0032810:CDS | 45.0% |
| ! | GTAGATGCAGCTGGTTCAAA+GGG | - | chr1_1:59940475-59940494 | Msa0032810:CDS | 45.0% |
| TCCATGATCTTGTCTTCCAC+GGG | + | chr1_1:59940544-59940563 | None:intergenic | 45.0% | |
| GTCCATGATCTTGTCTTCCA+CGG | + | chr1_1:59940545-59940564 | None:intergenic | 45.0% | |
| CAAGAGAGGATTAAGGTTGG+TGG | - | chr1_1:59940589-59940608 | Msa0032810:CDS | 45.0% | |
| GTGATGCTGTTACTGTTTCC+AGG | - | chr1_1:59940629-59940648 | Msa0032810:intron | 45.0% | |
| GGCCAAGAGTGAATTGAAGA+TGG | + | chr1_1:59941057-59941076 | None:intergenic | 45.0% | |
| CATTGCTGAGAATGAAGGAG+AGG | - | chr1_1:59941718-59941737 | Msa0032810:CDS | 45.0% | |
| ! | ATGCTCGAGACATGTTGCTT+TGG | - | chr1_1:59941826-59941845 | Msa0032810:intron | 45.0% |
| AGCGCCTTCTATACTCTTTC+TGG | - | chr1_1:59941944-59941963 | Msa0032810:five_prime_UTR | 45.0% | |
| AAAACGCGCGTTTCACTTCG+TGG | + | chr1_1:59940239-59940258 | None:intergenic | 50.0% | |
| GGCAGAAGGGATTAGGGTAT+AGG | + | chr1_1:59940274-59940293 | None:intergenic | 50.0% | |
| AGCAGTGGCAGAAGGGATTA+GGG | + | chr1_1:59940280-59940299 | None:intergenic | 50.0% | |
| AATGGACAGCAGTGGCAGAA+GGG | + | chr1_1:59940287-59940306 | None:intergenic | 50.0% | |
| AAATGGACAGCAGTGGCAGA+AGG | + | chr1_1:59940288-59940307 | None:intergenic | 50.0% | |
| GATCTTGTCTTCCACGGGTT+TGG | + | chr1_1:59940539-59940558 | None:intergenic | 50.0% | |
| ACCCGTGGAAGACAAGATCA+TGG | - | chr1_1:59940540-59940559 | Msa0032810:CDS | 50.0% | |
| AAAACGCGCGTTTCACTTCG+TGG | + | chr1_1:59940239-59940258 | None:intergenic | 50.0% | |
| GGCAGAAGGGATTAGGGTAT+AGG | + | chr1_1:59940274-59940293 | None:intergenic | 50.0% | |
| AGCAGTGGCAGAAGGGATTA+GGG | + | chr1_1:59940280-59940299 | None:intergenic | 50.0% | |
| AATGGACAGCAGTGGCAGAA+GGG | + | chr1_1:59940287-59940306 | None:intergenic | 50.0% | |
| AAATGGACAGCAGTGGCAGA+AGG | + | chr1_1:59940288-59940307 | None:intergenic | 50.0% | |
| GATCTTGTCTTCCACGGGTT+TGG | + | chr1_1:59940539-59940558 | None:intergenic | 50.0% | |
| ACCCGTGGAAGACAAGATCA+TGG | - | chr1_1:59940540-59940559 | Msa0032810:CDS | 50.0% | |
| CAGCAGTGGCAGAAGGGATT+AGG | + | chr1_1:59940281-59940300 | None:intergenic | 55.0% | |
| ATGGGTCGAGTAGATGCAGC+TGG | - | chr1_1:59940466-59940485 | Msa0032810:exon | 55.0% | |
| CACGGGTTTGGCACAGTCAA+TGG | + | chr1_1:59940527-59940546 | None:intergenic | 55.0% | |
| ! | CATTGACTGTGCCAAACCCG+TGG | - | chr1_1:59940525-59940544 | Msa0032810:CDS | 55.0% |
| GGTGGTAAACCTGGTGCTCT+TGG | - | chr1_1:59940607-59940626 | Msa0032810:intron | 55.0% | |
| !! | ACAGCATCACCAAGAGCACC+AGG | + | chr1_1:59940619-59940638 | None:intergenic | 55.0% |
| CAGCAGTGGCAGAAGGGATT+AGG | + | chr1_1:59940281-59940300 | None:intergenic | 55.0% | |
| ATGGGTCGAGTAGATGCAGC+TGG | - | chr1_1:59940466-59940485 | Msa0032810:exon | 55.0% | |
| CACGGGTTTGGCACAGTCAA+TGG | + | chr1_1:59940527-59940546 | None:intergenic | 55.0% | |
| ! | CATTGACTGTGCCAAACCCG+TGG | - | chr1_1:59940525-59940544 | Msa0032810:CDS | 55.0% |
| GGTGGTAAACCTGGTGCTCT+TGG | - | chr1_1:59940607-59940626 | Msa0032810:intron | 55.0% | |
| !! | ACAGCATCACCAAGAGCACC+AGG | + | chr1_1:59940619-59940638 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 59940210 | 59942012 | 59940210 | ID=Msa0032810;Name=Msa0032810 |
| chr1_1 | mRNA | 59940210 | 59942012 | 59940210 | ID=Msa0032810-mRNA-1;Parent=Msa0032810;Name=Msa0032810-mRNA-1;_AED=0.00;_eAED=0.00;_QI=161|1|1|1|0.5|0.33|3|261|125 |
| chr1_1 | exon | 59940210 | 59940615 | 59940210 | ID=Msa0032810-mRNA-1:exon:18663;Parent=Msa0032810-mRNA-1 |
| chr1_1 | exon | 59941524 | 59941765 | 59941524 | ID=Msa0032810-mRNA-1:exon:18662;Parent=Msa0032810-mRNA-1 |
| chr1_1 | exon | 59941861 | 59942012 | 59941861 | ID=Msa0032810-mRNA-1:exon:18661;Parent=Msa0032810-mRNA-1 |
| chr1_1 | five_prime_UTR | 59941861 | 59942012 | 59941861 | ID=Msa0032810-mRNA-1:five_prime_utr;Parent=Msa0032810-mRNA-1 |
| chr1_1 | five_prime_UTR | 59941757 | 59941765 | 59941757 | ID=Msa0032810-mRNA-1:five_prime_utr;Parent=Msa0032810-mRNA-1 |
| chr1_1 | CDS | 59941524 | 59941756 | 59941524 | ID=Msa0032810-mRNA-1:cds;Parent=Msa0032810-mRNA-1 |
| chr1_1 | CDS | 59940471 | 59940615 | 59940471 | ID=Msa0032810-mRNA-1:cds;Parent=Msa0032810-mRNA-1 |
| chr1_1 | three_prime_UTR | 59940210 | 59940470 | 59940210 | ID=Msa0032810-mRNA-1:three_prime_utr;Parent=Msa0032810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
