Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218720 | KEH38942.1 | 87.279 | 283 | 23 | 4 | 1 | 274 | 1 | 279 | 1.09e-146 | 422 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218720 | sp|Q8LJS2|HDT1_SOYBN | 59.272 | 302 | 88 | 9 | 1 | 274 | 1 | 295 | 9.14e-95 | 283 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218720 | A0A072VB01 | 87.279 | 283 | 23 | 4 | 1 | 274 | 1 | 279 | 5.21e-147 | 422 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0218720 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0022970 | Msa0218720 | 0.808259 | 3.381579e-50 | -8.615850e-47 |
| Msa0057480 | Msa0218720 | 0.812801 | 3.531840e-51 | -8.615850e-47 |
| Msa0115870 | Msa0218720 | 0.803180 | 3.943036e-49 | -8.615850e-47 |
| Msa0116670 | Msa0218720 | 0.812964 | 3.251861e-51 | -8.615850e-47 |
| Msa0119900 | Msa0218720 | 0.802263 | 6.096272e-49 | -8.615850e-47 |
| Msa0172900 | Msa0218720 | 0.807835 | 4.163610e-50 | -8.615850e-47 |
| Msa0172930 | Msa0218720 | 0.805400 | 1.359559e-49 | -8.615850e-47 |
| Msa0173530 | Msa0218720 | 0.814493 | 1.497816e-51 | -8.615850e-47 |
| Msa0202490 | Msa0218720 | 0.819138 | 1.359169e-52 | -8.615850e-47 |
| Msa0218720 | Msa0218830 | 0.866562 | 2.604389e-65 | -8.615850e-47 |
| Msa0218720 | Msa0221030 | 0.825613 | 4.260542e-54 | -8.615850e-47 |
| Msa0218720 | Msa0230490 | 0.832784 | 7.755917e-56 | -8.615850e-47 |
| Msa0218720 | Msa0230520 | 0.848884 | 4.609947e-60 | -8.615850e-47 |
| Msa0218720 | Msa0245580 | 0.816924 | 4.302862e-52 | -8.615850e-47 |
| Msa0218720 | Msa0280370 | 0.818673 | 1.733366e-52 | -8.615850e-47 |
| Msa0218720 | Msa0284180 | 0.826516 | 2.598949e-54 | -8.615850e-47 |
| Msa0218720 | Msa0296250 | 0.809998 | 1.433839e-50 | -8.615850e-47 |
| Msa0218720 | Msa0305780 | 0.809842 | 1.549225e-50 | -8.615850e-47 |
| Msa0218720 | Msa0306690 | 0.806881 | 6.631401e-50 | -8.615850e-47 |
| Msa0218720 | Msa0317910 | 0.813108 | 3.024078e-51 | -8.615850e-47 |
| Msa0218720 | Msa0320590 | 0.808372 | 3.198543e-50 | -8.615850e-47 |
| Msa0218720 | Msa0348830 | 0.832651 | 8.370910e-56 | -8.615850e-47 |
| Msa0218720 | Msa0423750 | 0.805289 | 1.434239e-49 | -8.615850e-47 |
| Msa0218720 | Msa0443390 | 0.829272 | 5.648849e-55 | -8.615850e-47 |
| Msa0218720 | Msa0546030 | 0.805942 | 1.046415e-49 | -8.615850e-47 |
| Msa0218720 | Msa0581110 | 0.813736 | 2.200489e-51 | -8.615850e-47 |
| Msa0218720 | Msa0581280 | 0.803924 | 2.763316e-49 | -8.615850e-47 |
| Msa0218720 | Msa0588360 | 0.804437 | 2.161653e-49 | -8.615850e-47 |
| Msa0218720 | Msa0615580 | 0.830880 | 2.288709e-55 | -8.615850e-47 |
| Msa0218720 | Msa0623200 | 0.811428 | 7.036689e-51 | -8.615850e-47 |
| Msa0218720 | Msa0666230 | 0.822770 | 1.982476e-53 | -8.615850e-47 |
| Msa0218720 | Msa0698780 | 0.827148 | 1.835524e-54 | -8.615850e-47 |
| Msa0218720 | Msa0729200 | 0.801114 | 1.048885e-48 | -8.615850e-47 |
| Msa0218720 | Msa0766080 | 0.809314 | 2.011261e-50 | -8.615850e-47 |
| Msa0218720 | Msa0769590 | 0.804891 | 1.737369e-49 | -8.615850e-47 |
| Msa0218720 | Msa0785130 | 0.813520 | 2.455783e-51 | -8.615850e-47 |
| Msa0218720 | Msa0806880 | 0.810655 | 1.034964e-50 | -8.615850e-47 |
| Msa0218720 | Msa0808800 | 0.800578 | 1.349831e-48 | -8.615850e-47 |
| Msa0218720 | Msa0876170 | 0.821238 | 4.490826e-53 | -8.615850e-47 |
| Msa0218720 | Msa0888810 | 0.813987 | 1.937704e-51 | -8.615850e-47 |
| Msa0218720 | Msa0913240 | 0.837358 | 5.450557e-57 | -8.615850e-47 |
| Msa0218720 | Msa0992550 | 0.871583 | 6.117797e-67 | -8.615850e-47 |
| Msa0218720 | Msa1039520 | 0.804193 | 2.428937e-49 | -8.615850e-47 |
| Msa0218720 | Msa1048690 | 0.803384 | 3.577546e-49 | -8.615850e-47 |
| Msa0218720 | Msa1072710 | 0.827550 | 1.470491e-54 | -8.615850e-47 |
| Msa0218720 | Msa1104210 | 0.800170 | 1.634468e-48 | -8.615850e-47 |
| Msa0218720 | Msa1105510 | 0.811697 | 6.148755e-51 | -8.615850e-47 |
| Msa0218720 | Msa1126830 | 0.816355 | 5.772211e-52 | -8.615850e-47 |
| Msa0218720 | Msa1165780 | 0.835254 | 1.867318e-56 | -8.615850e-47 |
| Msa0218720 | Msa1175350 | 0.840456 | 8.602637e-58 | -8.615850e-47 |
| Msa0218720 | Msa1195300 | 0.827990 | 1.152982e-54 | -8.615850e-47 |
| Msa0218720 | Msa1208020 | 0.847875 | 8.768067e-60 | -8.615850e-47 |
| Msa0218720 | Msa1235610 | 0.840091 | 1.071622e-57 | -8.615850e-47 |
| Msa0218720 | Msa1262890 | 0.813126 | 2.997646e-51 | -8.615850e-47 |
| Msa0218720 | Msa1277260 | 0.824119 | 9.590631e-54 | -8.615850e-47 |
| Msa0218720 | Msa1315890 | 0.842021 | 3.333833e-58 | -8.615850e-47 |
| Msa0218720 | Msa1331250 | 0.822379 | 2.444636e-53 | -8.615850e-47 |
| Msa0218720 | Msa1332250 | 0.805961 | 1.036887e-49 | -8.615850e-47 |
| Msa0218720 | Msa1338190 | 0.806788 | 6.939120e-50 | -8.615850e-47 |
| Msa0218720 | Msa1349570 | 0.802793 | 4.739720e-49 | -8.615850e-47 |
| Msa0218720 | Msa1369190 | 0.815163 | 1.063991e-51 | -8.615850e-47 |
| Msa0218720 | Msa1413500 | 0.807607 | 4.654829e-50 | -8.615850e-47 |
| Msa0218720 | Msa1418770 | 0.806525 | 7.886480e-50 | -8.615850e-47 |
| Msa0218720 | Msa1426370 | 0.812488 | 4.133618e-51 | -8.615850e-47 |
| Msa0218720 | Msa1426490 | 0.806564 | 7.738288e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218720 | MtrunA17_Chr2g0320884 | 82.274 | 299 | 24 | 5 | 1 | 274 | 35 | 329 | 5.58e-142 | 402 |
| Msa0218720 | MtrunA17_Chr4g0027181 | 46.914 | 243 | 120 | 4 | 1 | 240 | 5 | 241 | 9.10e-53 | 172 |
| Msa0218720 | MtrunA17_Chr7g0265761 | 41.558 | 308 | 127 | 8 | 1 | 274 | 1 | 289 | 6.72e-46 | 155 |
| Msa0218720 | MtrunA17_Chr4g0027191 | 43.781 | 201 | 90 | 3 | 2 | 182 | 6 | 203 | 3.12e-35 | 130 |
| Msa0218720 | MtrunA17_Chr4g0027191 | 52.083 | 96 | 35 | 4 | 179 | 271 | 282 | 369 | 4.56e-14 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218720 | AT5G03740.1 | 40.199 | 301 | 143 | 9 | 1 | 273 | 1 | 292 | 3.74e-44 | 151 |
| Msa0218720 | AT5G22650.2 | 40.541 | 296 | 127 | 11 | 1 | 259 | 1 | 284 | 3.29e-33 | 123 |
| Msa0218720 | AT5G22650.1 | 40.404 | 297 | 127 | 12 | 1 | 259 | 1 | 285 | 2.46e-31 | 118 |
| Msa0218720 | AT3G44750.2 | 53.012 | 83 | 36 | 2 | 1 | 83 | 1 | 80 | 2.05e-21 | 90.5 |
| Msa0218720 | AT3G44750.1 | 53.012 | 83 | 36 | 2 | 1 | 83 | 1 | 80 | 2.17e-21 | 90.5 |
| Msa0218720 | AT2G27840.4 | 42.222 | 90 | 47 | 3 | 1 | 88 | 1 | 87 | 2.11e-15 | 72.4 |
| Msa0218720 | AT2G27840.1 | 42.222 | 90 | 47 | 3 | 1 | 88 | 1 | 87 | 2.48e-15 | 71.6 |
| Msa0218720 | AT2G27840.3 | 29.245 | 212 | 92 | 7 | 1 | 194 | 1 | 172 | 5.16e-11 | 61.2 |
Find 84 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTGTTTCCAATGGAGTTT+TGG | 0.108547 | 2_1:+66058356 | Msa0218720:exon |
| TCCTCCAGACTTGGGAGTTT+TGG | 0.188316 | 2_1:-66061445 | None:intergenic |
| GGAGTCTTTCCACCTTTCTT+AGG | 0.193593 | 2_1:-66061411 | None:intergenic |
| TTATGATTATATAGTGATTC+AGG | 0.227831 | 2_1:-66058259 | None:intergenic |
| GAAACCTTCTCCTCTGCTTT+TGG | 0.243625 | 2_1:-66059668 | None:intergenic |
| TCTTCATCTTCCTCCTCCTT+TGG | 0.280167 | 2_1:-66059752 | None:intergenic |
| GAAGGTTTCTGAACCTAAAA+AGG | 0.290028 | 2_1:+66059682 | Msa0218720:CDS |
| AATCTAAATGCAATGAATTT+AGG | 0.293983 | 2_1:-66061828 | None:intergenic |
| GAATGAGTATGTTAGGGTTT+TGG | 0.301954 | 2_1:-66058327 | None:intergenic |
| GATGAATCTGATGATGAAAA+TGG | 0.302701 | 2_1:+66059791 | Msa0218720:CDS |
| GAGAGATGAATGAGTATGTT+AGG | 0.308902 | 2_1:-66058334 | None:intergenic |
| TGGGGAACAAAAGCTTGTTT+TGG | 0.309523 | 2_1:+66058886 | Msa0218720:CDS |
| CATTGGGCCTCTTCTTTCCC+TGG | 0.324129 | 2_1:-66060270 | None:intergenic |
| TTTGATTTCTTGGAAGAAAC+TGG | 0.327081 | 2_1:-66060310 | None:intergenic |
| TGGAAGCTGTTTGACTTTGA+TGG | 0.335428 | 2_1:+66061793 | Msa0218720:three_prime_UTR |
| TGAATTAGGTGCTGAGGTTA+AGG | 0.360277 | 2_1:+66058647 | Msa0218720:intron |
| TTTAGCAGGTGCAGCATTCT+TGG | 0.365068 | 2_1:-66059711 | None:intergenic |
| AGGACATTCAACTCTGAAAC+TGG | 0.374828 | 2_1:+66061585 | Msa0218720:intron |
| TTATGCCACTCGAGCTATAT+AGG | 0.375198 | 2_1:+66061883 | Msa0218720:three_prime_UTR |
| TGGTTATTTACCTCAAAGTT+GGG | 0.376973 | 2_1:+66058867 | Msa0218720:CDS |
| GCAGCTGCTTCAAGGTCATA+TGG | 0.394188 | 2_1:-66058693 | None:intergenic |
| GAGTCTTTCCACCTTTCTTA+GGG | 0.394889 | 2_1:-66061410 | None:intergenic |
| GAAATGAACACTAGCAGCTT+TGG | 0.398995 | 2_1:-66058987 | None:intergenic |
| TGTGAATAGCAGCTGCTTCA+AGG | 0.402299 | 2_1:-66058701 | None:intergenic |
| TAAATAACCACAGGCTCGTT+TGG | 0.405456 | 2_1:-66058854 | None:intergenic |
| TTGGTCTCACCAGTCTTCTC+AGG | 0.407469 | 2_1:-66060343 | None:intergenic |
| GAGAGTGTGTGTGGCGTAAG+AGG | 0.415704 | 2_1:-66058300 | None:intergenic |
| GTGAGTATCCTAAGGATGTT+AGG | 0.420054 | 2_1:+66061708 | Msa0218720:three_prime_UTR |
| GTGGTTATTTACCTCAAAGT+TGG | 0.423882 | 2_1:+66058866 | Msa0218720:CDS |
| TTGATTACCACAGAGCAAAA+TGG | 0.430501 | 2_1:+66059544 | Msa0218720:CDS |
| GATGCCAAAACTCCCAAGTC+TGG | 0.432291 | 2_1:+66061441 | Msa0218720:CDS |
| AGCTGCTATTCACATTTCTC+AGG | 0.433247 | 2_1:+66058710 | Msa0218720:CDS |
| GTGTGTGGCGTAAGAGGAAG+AGG | 0.451248 | 2_1:-66058294 | None:intergenic |
| AATTGTAGTTTGTCGACAAA+TGG | 0.453497 | 2_1:+66061658 | Msa0218720:three_prime_UTR |
| TTTGTGGTGATGACATGTTT+TGG | 0.453561 | 2_1:+66061773 | Msa0218720:three_prime_UTR |
| TTTGCTCTGTGGTAATCAAT+GGG | 0.454741 | 2_1:-66059540 | None:intergenic |
| TATGATTATATAGTGATTCA+GGG | 0.455190 | 2_1:-66058258 | None:intergenic |
| TCTTGATATTGTCCTTGAAA+AGG | 0.456315 | 2_1:+66058943 | Msa0218720:CDS |
| TTGTCAGATGGTAAGAAAGC+TGG | 0.456417 | 2_1:+66061369 | Msa0218720:intron |
| TTAGGTGCTGAGGTTAAGGT+TGG | 0.459431 | 2_1:+66058651 | Msa0218720:intron |
| AGAGATGAATGAGTATGTTA+GGG | 0.461242 | 2_1:-66058333 | None:intergenic |
| AGAGAGTCCTCCTCCAGACT+TGG | 0.471298 | 2_1:-66061454 | None:intergenic |
| TTTCCACCTTTCTTAGGGTG+AGG | 0.472414 | 2_1:-66061405 | None:intergenic |
| GTTTCTAGATACTCTCTAAA+GGG | 0.492189 | 2_1:-66061959 | None:intergenic |
| ACTTCACTTAGCAGCATGCT+TGG | 0.492494 | 2_1:-66061628 | None:intergenic |
| GGTTTCTAGATACTCTCTAA+AGG | 0.493068 | 2_1:-66061960 | None:intergenic |
| TCATCTCTCACTGTTTCCAA+TGG | 0.500927 | 2_1:+66058348 | Msa0218720:exon |
| ACAACCTTCACGTGTTTAGC+AGG | 0.509884 | 2_1:-66059725 | None:intergenic |
| TGAGAGTGATGAGGATGATG+AGG | 0.510768 | 2_1:+66060127 | Msa0218720:CDS |
| GTAAGAGGAAGAGGAAATGA+AGG | 0.513748 | 2_1:-66058285 | None:intergenic |
| GACAGACACCTAACATCCTT+AGG | 0.519803 | 2_1:-66061716 | None:intergenic |
| AGAACCAAAAGCAGAGGAGA+AGG | 0.523090 | 2_1:+66059664 | Msa0218720:CDS |
| GGAAGAGACTCCTGTGAAGA+AGG | 0.527324 | 2_1:+66060148 | Msa0218720:CDS |
| TGTGCCATTACCTTCTTCAC+AGG | 0.535491 | 2_1:-66060158 | None:intergenic |
| CAGCTGCTTCAAGGTCATAT+GGG | 0.543766 | 2_1:-66058692 | None:intergenic |
| CTCACCAGTCTTCTCAGGAG+TGG | 0.560433 | 2_1:-66060338 | None:intergenic |
| GAGAGTCCTCCTCCAGACTT+GGG | 0.565423 | 2_1:-66061453 | None:intergenic |
| AGAGTATCTAGAAACCTAGC+GGG | 0.567677 | 2_1:+66061967 | Msa0218720:three_prime_UTR |
| AGGTTACCCCAAAACTCCAT+TGG | 0.575655 | 2_1:-66058364 | None:intergenic |
| GCAACTCCTCACCCTAAGAA+AGG | 0.575686 | 2_1:+66061399 | Msa0218720:CDS |
| AATGCCACTCCTGAGAAGAC+TGG | 0.575986 | 2_1:+66060334 | Msa0218720:CDS |
| AAAACTCCCAAGTCTGGAGG+AGG | 0.583660 | 2_1:+66061447 | Msa0218720:CDS |
| CGTGAAGGTTGTTGATCCAA+AGG | 0.584807 | 2_1:+66059736 | Msa0218720:CDS |
| GGTTGTTGATCCAAAGGAGG+AGG | 0.590224 | 2_1:+66059742 | Msa0218720:CDS |
| GTAGTATGGTGAGTATCCTA+AGG | 0.595850 | 2_1:+66061700 | Msa0218720:three_prime_UTR |
| GTTATTGTATAGGTTGCACT+TGG | 0.600855 | 2_1:+66058812 | Msa0218720:intron |
| GGTTATTTACCTCAAAGTTG+GGG | 0.606552 | 2_1:+66058868 | Msa0218720:CDS |
| AAAACCAGAACCAAAAGCAG+AGG | 0.625041 | 2_1:+66059658 | Msa0218720:CDS |
| TTTGGAAGTGAGAGTGTGTG+TGG | 0.625431 | 2_1:-66058309 | None:intergenic |
| TGGACTGCAACAACATAGCA+AGG | 0.629185 | 2_1:+66061605 | Msa0218720:CDS |
| AATAGCCTATATAGCTCGAG+TGG | 0.629986 | 2_1:-66061888 | None:intergenic |
| ACTCCTCACCCTAAGAAAGG+TGG | 0.633029 | 2_1:+66061402 | Msa0218720:CDS |
| AGATGAAGATGAGAGTGATG+AGG | 0.643600 | 2_1:+66060118 | Msa0218720:CDS |
| TAAGAGGAAGAGGAAATGAA+GGG | 0.648519 | 2_1:-66058284 | None:intergenic |
| AAATGGAAGCTCTGATGATG+AGG | 0.649458 | 2_1:+66059808 | Msa0218720:CDS |
| TGCACCTGCTAAACACGTGA+AGG | 0.650932 | 2_1:+66059721 | Msa0218720:CDS |
| GCCAAAACTCCCAAGTCTGG+AGG | 0.652249 | 2_1:+66061444 | Msa0218720:CDS |
| ACTTTGAGGTAAATAACCAC+AGG | 0.655718 | 2_1:-66058863 | None:intergenic |
| AGACAAACCAAACGAGCCTG+TGG | 0.660313 | 2_1:+66058847 | Msa0218720:CDS |
| ACAATATCAAGAGAAATCTG+AGG | 0.664546 | 2_1:-66058932 | None:intergenic |
| GAAGGTTGTTGATCCAAAGG+AGG | 0.676188 | 2_1:+66059739 | Msa0218720:CDS |
| GAGAGTATCTAGAAACCTAG+CGG | 0.695129 | 2_1:+66061966 | Msa0218720:three_prime_UTR |
| GAGTATCTAGAAACCTAGCG+GGG | 0.735925 | 2_1:+66061968 | Msa0218720:three_prime_UTR |
| AGGTTGACCAGGGAAAGAAG+AGG | 0.740019 | 2_1:+66060263 | Msa0218720:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATAGTTTACATTTTATAT+TGG | + | chr2_1:66059335-66059354 | Msa0218720:intron | 10.0% |
| !!! | TACATTTCATTTTTAAATTA+CGG | + | chr2_1:66061016-66061035 | Msa0218720:intron | 10.0% |
| !!! | TGTTTTTCTTTTTTAAATTA+CGG | - | chr2_1:66061178-66061197 | None:intergenic | 10.0% |
| !! | AAAAATTTAAACACAAATTA+CGG | - | chr2_1:66061351-66061370 | None:intergenic | 10.0% |
| !!! | ATATATTTATTACTTTTAGA+TGG | + | chr2_1:66061519-66061538 | Msa0218720:intron | 10.0% |
| !!! | TATATTTATTACTTTTAGAT+GGG | + | chr2_1:66061520-66061539 | Msa0218720:intron | 10.0% |
| !!! | TGAATTATATTATTTTTTAG+AGG | + | chr2_1:66061912-66061931 | Msa0218720:three_prime_UTR | 10.0% |
| !! | AACTATATAATAACAAATCA+AGG | - | chr2_1:66059049-66059068 | None:intergenic | 15.0% |
| !!! | TTTTTGTTGATATTTTTCTA+AGG | + | chr2_1:66059078-66059097 | Msa0218720:intron | 15.0% |
| !! | TATAATTATTATGGTTACTA+TGG | + | chr2_1:66060206-66060225 | Msa0218720:intron | 15.0% |
| !! | AAACAATATATAACACAATT+TGG | - | chr2_1:66060365-66060384 | None:intergenic | 15.0% |
| !!! | TATTTTCTAATTAGACAAAA+AGG | - | chr2_1:66060394-66060413 | None:intergenic | 15.0% |
| !!! | TTAAATTATGGACTATATAA+CGG | - | chr2_1:66061114-66061133 | None:intergenic | 15.0% |
| !!! | TAAGTGTGAATTTTAAATTA+TGG | - | chr2_1:66061126-66061145 | None:intergenic | 15.0% |
| !! | AAAGTAATAAATATATGCTT+CGG | - | chr2_1:66061515-66061534 | None:intergenic | 15.0% |
| !! | TATGATTATATAGTGATTCA+GGG | - | chr2_1:66058261-66058280 | None:intergenic | 20.0% |
| !! | TTATGATTATATAGTGATTC+AGG | - | chr2_1:66058262-66058281 | None:intergenic | 20.0% |
| !!! | TATACGTTGATTTTTGAATT+AGG | + | chr2_1:66058633-66058652 | Msa0218720:intron | 20.0% |
| !!! | AAATAACCATTGTTCTTTTT+AGG | + | chr2_1:66059635-66059654 | Msa0218720:intron | 20.0% |
| !! | TTATTTAGTGTTCTCAATTT+AGG | + | chr2_1:66059983-66060002 | Msa0218720:intron | 20.0% |
| !! | TATTTAGTGTTCTCAATTTA+GGG | + | chr2_1:66059984-66060003 | Msa0218720:intron | 20.0% |
| !!! | TTTATGTTGATAATTGTAGA+TGG | + | chr2_1:66060079-66060098 | Msa0218720:intron | 20.0% |
| !!! | CGTCTTTTTTTTTTTTTTGA+AGG | + | chr2_1:66060243-66060262 | Msa0218720:intron | 20.0% |
| !! | TGTAAATTGTTAAATTGTGT+TGG | + | chr2_1:66060763-66060782 | Msa0218720:intron | 20.0% |
| !!! | TAAATTATGGACTATATAAC+GGG | - | chr2_1:66061113-66061132 | None:intergenic | 20.0% |
| !! | AAGTAATAAATATATGCTTC+GGG | - | chr2_1:66061514-66061533 | None:intergenic | 20.0% |
| !! | AGACAAAAACAAAAAAAGAA+AGG | - | chr2_1:66061556-66061575 | None:intergenic | 20.0% |
| !!! | ATTGTTTTTCATATGTAGTA+TGG | + | chr2_1:66061686-66061705 | Msa0218720:three_prime_UTR | 20.0% |
| !! | AATCTAAATGCAATGAATTT+AGG | - | chr2_1:66061831-66061850 | None:intergenic | 20.0% |
| ! | TCAAAAATCAAAGAGTAGTT+CGG | - | chr2_1:66058502-66058521 | None:intergenic | 25.0% |
| ! | AACTTGTATTCAAGTGTATT+AGG | + | chr2_1:66058589-66058608 | Msa0218720:intron | 25.0% |
| ! | ACTTGTATTCAAGTGTATTA+GGG | + | chr2_1:66058590-66058609 | Msa0218720:intron | 25.0% |
| ! | TTGTAGGTTTACTAAATTTC+TGG | + | chr2_1:66058784-66058803 | Msa0218720:intron | 25.0% |
| ! | ATTTAGATAACAGATCTGTA+AGG | - | chr2_1:66059300-66059319 | None:intergenic | 25.0% |
| !!! | TTGTCATGCAATTGTTTTTA+AGG | + | chr2_1:66059440-66059459 | Msa0218720:intron | 25.0% |
| !!! | TCTGAATTTTTTTGTTGGTT+GGG | + | chr2_1:66059584-66059603 | Msa0218720:intron | 25.0% |
| !!! | TTGATCAATGTTTTGTTTAG+TGG | + | chr2_1:66059834-66059853 | Msa0218720:intron | 25.0% |
| !! | ACATTTGTTAAATGTGCTAT+TGG | + | chr2_1:66059956-66059975 | Msa0218720:intron | 25.0% |
| !! | CATTTGTTAAATGTGCTATT+GGG | + | chr2_1:66059957-66059976 | Msa0218720:intron | 25.0% |
| !!! | TTTGTGTTGTTTATAGATCA+TGG | + | chr2_1:66060522-66060541 | Msa0218720:intron | 25.0% |
| ! | TCAAACGATGTTTCAATTTA+GGG | - | chr2_1:66061246-66061265 | None:intergenic | 25.0% |
| ! | TTCAAACGATGTTTCAATTT+AGG | - | chr2_1:66061247-66061266 | None:intergenic | 25.0% |
| ! | GAAGGATATATATCTACATA+TGG | - | chr2_1:66061318-66061337 | None:intergenic | 25.0% |
| !! | GTGTTTAAATTTTTGTCAGA+TGG | + | chr2_1:66061357-66061376 | Msa0218720:intron | 25.0% |
| !!! | TGTTTTTGTCTTTAATTACC+AGG | + | chr2_1:66061565-66061584 | Msa0218720:intron | 25.0% |
| ATAGTGATTCAGGGAAAAAA+GGG | - | chr2_1:66058252-66058271 | None:intergenic | 30.0% | |
| TATAGTGATTCAGGGAAAAA+AGG | - | chr2_1:66058253-66058272 | None:intergenic | 30.0% | |
| AGAGATGAATGAGTATGTTA+GGG | - | chr2_1:66058336-66058355 | None:intergenic | 30.0% | |
| TATTCACATTTCTCAGGTTA+GGG | + | chr2_1:66058716-66058735 | Msa0218720:intron | 30.0% | |
| !! | GTTCTAAGTTGTGTTTTTGT+AGG | + | chr2_1:66058768-66058787 | Msa0218720:intron | 30.0% |
| ! | TCTGGTTTGTGTTATTGTAT+AGG | + | chr2_1:66058802-66058821 | Msa0218720:intron | 30.0% |
| TGGTTATTTACCTCAAAGTT+GGG | + | chr2_1:66058867-66058886 | Msa0218720:CDS | 30.0% | |
| ACAATATCAAGAGAAATCTG+AGG | - | chr2_1:66058935-66058954 | None:intergenic | 30.0% | |
| TCTTGATATTGTCCTTGAAA+AGG | + | chr2_1:66058943-66058962 | Msa0218720:CDS | 30.0% | |
| GATGACAAATAGACTAATCT+GGG | - | chr2_1:66059155-66059174 | None:intergenic | 30.0% | |
| ATGATGTCAATATACACGTT+AGG | - | chr2_1:66059196-66059215 | None:intergenic | 30.0% | |
| CCAAAACACATCAATAGTTA+AGG | - | chr2_1:66059377-66059396 | None:intergenic | 30.0% | |
| ! | CCTTAACTATTGATGTGTTT+TGG | + | chr2_1:66059374-66059393 | Msa0218720:intron | 30.0% |
| ATTGCATGACAAATTTCAGA+TGG | - | chr2_1:66059432-66059451 | None:intergenic | 30.0% | |
| AGGTTAGATTAAGATTGTGT+TGG | + | chr2_1:66059460-66059479 | Msa0218720:intron | 30.0% | |
| ACAAAAAAATTCAGACCAAG+AGG | - | chr2_1:66059579-66059598 | None:intergenic | 30.0% | |
| !!! | CTTGGTCTGAATTTTTTTGT+TGG | + | chr2_1:66059579-66059598 | Msa0218720:intron | 30.0% |
| !!! | GTCTGAATTTTTTTGTTGGT+TGG | + | chr2_1:66059583-66059602 | Msa0218720:intron | 30.0% |
| ! | GGTTTTCCTAAAAAGAACAA+TGG | - | chr2_1:66059644-66059663 | None:intergenic | 30.0% |
| ! | GATGAATCTGATGATGAAAA+TGG | + | chr2_1:66059791-66059810 | Msa0218720:CDS | 30.0% |
| !! | TATAAGTTGTCCATTTTTGC+TGG | + | chr2_1:66059865-66059884 | Msa0218720:intron | 30.0% |
| ATTATGGTTACTATGGTGAT+TGG | + | chr2_1:66060213-66060232 | Msa0218720:intron | 30.0% | |
| !!! | TTTTTTTTTGAAGGTTGACC+AGG | + | chr2_1:66060252-66060271 | Msa0218720:intron | 30.0% |
| !!! | TTTTTTTTGAAGGTTGACCA+GGG | + | chr2_1:66060253-66060272 | Msa0218720:intron | 30.0% |
| !!! | GTTTTTGAAGCAGATTCATT+GGG | - | chr2_1:66060289-66060308 | None:intergenic | 30.0% |
| !!! | AGTTTTTGAAGCAGATTCAT+TGG | - | chr2_1:66060290-66060309 | None:intergenic | 30.0% |
| ! | TTTGATTTCTTGGAAGAAAC+TGG | - | chr2_1:66060313-66060332 | None:intergenic | 30.0% |
| !!! | AGTGGCATTTTTTGATTTCT+TGG | - | chr2_1:66060323-66060342 | None:intergenic | 30.0% |
| ! | TTTGTGTTGTTGATAGATCA+TGG | + | chr2_1:66060574-66060593 | Msa0218720:intron | 30.0% |
| GTGTTAGATATTAAGAAAGC+TGG | + | chr2_1:66060924-66060943 | Msa0218720:intron | 30.0% | |
| AATTACGGATGTGTAATAGA+AGG | - | chr2_1:66061336-66061355 | None:intergenic | 30.0% | |
| ! | AATTGTAGTTTGTCGACAAA+TGG | + | chr2_1:66061658-66061677 | Msa0218720:three_prime_UTR | 30.0% |
| GTTCACTAGATCAAAAATCA+AGG | - | chr2_1:66061741-66061760 | None:intergenic | 30.0% | |
| ! | TTTTTGATCTAGTGAACATG+AGG | + | chr2_1:66061744-66061763 | Msa0218720:three_prime_UTR | 30.0% |
| ! | TTTTGATCTAGTGAACATGA+GGG | + | chr2_1:66061745-66061764 | Msa0218720:three_prime_UTR | 30.0% |
| ! | GTTTCTAGATACTCTCTAAA+GGG | - | chr2_1:66061962-66061981 | None:intergenic | 30.0% |
| ! | AAGGGTTTTTGCAAAAGCTA+GGG | - | chr2_1:66058234-66058253 | None:intergenic | 35.0% |
| ! | AAAGGGTTTTTGCAAAAGCT+AGG | - | chr2_1:66058235-66058254 | None:intergenic | 35.0% |
| TAAGAGGAAGAGGAAATGAA+GGG | - | chr2_1:66058287-66058306 | None:intergenic | 35.0% | |
| ! | GAATGAGTATGTTAGGGTTT+TGG | - | chr2_1:66058330-66058349 | None:intergenic | 35.0% |
| GAGAGATGAATGAGTATGTT+AGG | - | chr2_1:66058337-66058356 | None:intergenic | 35.0% | |
| ! | ACTGTTTCCAATGGAGTTTT+GGG | + | chr2_1:66058357-66058376 | Msa0218720:exon | 35.0% |
| ATAACGAAAGGAGAAAGATG+AGG | - | chr2_1:66058387-66058406 | None:intergenic | 35.0% | |
| TCTGAAAGGTAGATAACGAA+AGG | - | chr2_1:66058399-66058418 | None:intergenic | 35.0% | |
| AAAACAAGTCATCGTCTGAA+AGG | - | chr2_1:66058413-66058432 | None:intergenic | 35.0% | |
| !! | GATTTTTGAATTAGGTGCTG+AGG | + | chr2_1:66058641-66058660 | Msa0218720:intron | 35.0% |
| CTATTCACATTTCTCAGGTT+AGG | + | chr2_1:66058715-66058734 | Msa0218720:intron | 35.0% | |
| GTTATTGTATAGGTTGCACT+TGG | + | chr2_1:66058812-66058831 | Msa0218720:intron | 35.0% | |
| !! | ACTTTGAGGTAAATAACCAC+AGG | - | chr2_1:66058866-66058885 | None:intergenic | 35.0% |
| GTGGTTATTTACCTCAAAGT+TGG | + | chr2_1:66058866-66058885 | Msa0218720:CDS | 35.0% | |
| GGTTATTTACCTCAAAGTTG+GGG | + | chr2_1:66058868-66058887 | Msa0218720:CDS | 35.0% | |
| ! | AGGAATTTTGTCCCTGTTTA+GGG | - | chr2_1:66058915-66058934 | None:intergenic | 35.0% |
| ! | ATAGCTCAAACTCCTTTTCA+AGG | - | chr2_1:66058958-66058977 | None:intergenic | 35.0% |
| GGATGACAAATAGACTAATC+TGG | - | chr2_1:66059156-66059175 | None:intergenic | 35.0% | |
| !! | GTTTAGTTTGTTGCTATCCT+AGG | + | chr2_1:66059272-66059291 | Msa0218720:intron | 35.0% |
| TTTGCTCTGTGGTAATCAAT+GGG | - | chr2_1:66059543-66059562 | None:intergenic | 35.0% | |
| ! | TTTTGCTCTGTGGTAATCAA+TGG | - | chr2_1:66059544-66059563 | None:intergenic | 35.0% |
| TTGATTACCACAGAGCAAAA+TGG | + | chr2_1:66059544-66059563 | Msa0218720:CDS | 35.0% | |
| GAAGGTTTCTGAACCTAAAA+AGG | + | chr2_1:66059682-66059701 | Msa0218720:CDS | 35.0% | |
| ACATGCATAATCAAGACTGA+AGG | - | chr2_1:66059900-66059919 | None:intergenic | 35.0% | |
| AATGTAAGAACTCGTGCAAA+TGG | - | chr2_1:66060450-66060469 | None:intergenic | 35.0% | |
| ! | ACTGTGTTGTTGATAGATCA+TGG | + | chr2_1:66060470-66060489 | Msa0218720:intron | 35.0% |
| ! | ATAGATCATGGATTGATGCT+TGG | + | chr2_1:66060482-66060501 | Msa0218720:intron | 35.0% |
| ! | TAGATCATGGATTGATGCTT+GGG | + | chr2_1:66060483-66060502 | Msa0218720:intron | 35.0% |
| !! | ATTGTAGTTTGTTTCCGTCA+TGG | + | chr2_1:66060703-66060722 | Msa0218720:intron | 35.0% |
| !! | AATGTAGCTTGTTTGCATCA+TGG | + | chr2_1:66060826-66060845 | Msa0218720:intron | 35.0% |
| ! | GTTTCAATTTAGGGTGTGTT+TGG | - | chr2_1:66061237-66061256 | None:intergenic | 35.0% |
| CATGTCAATGCTGAAATTTG+AGG | + | chr2_1:66061272-66061291 | Msa0218720:intron | 35.0% | |
| !! | TTTGTGGTGATGACATGTTT+TGG | + | chr2_1:66061773-66061792 | Msa0218720:three_prime_UTR | 35.0% |
| ! | GGTTTCTAGATACTCTCTAA+AGG | - | chr2_1:66061963-66061982 | None:intergenic | 35.0% |
| ! | TGCAAAAGCTAGGGTTTTTG+CGG | - | chr2_1:66058225-66058244 | None:intergenic | 40.0% |
| GTAAGAGGAAGAGGAAATGA+AGG | - | chr2_1:66058288-66058307 | None:intergenic | 40.0% | |
| TCATCTCTCACTGTTTCCAA+TGG | + | chr2_1:66058348-66058367 | Msa0218720:exon | 40.0% | |
| ! | CACTGTTTCCAATGGAGTTT+TGG | + | chr2_1:66058356-66058375 | Msa0218720:exon | 40.0% |
| ! | CTGTTTCCAATGGAGTTTTG+GGG | + | chr2_1:66058358-66058377 | Msa0218720:exon | 40.0% |
| !! | TGAATTAGGTGCTGAGGTTA+AGG | + | chr2_1:66058647-66058666 | Msa0218720:intron | 40.0% |
| AGCTGCTATTCACATTTCTC+AGG | + | chr2_1:66058710-66058729 | Msa0218720:CDS | 40.0% | |
| TAAATAACCACAGGCTCGTT+TGG | - | chr2_1:66058857-66058876 | None:intergenic | 40.0% | |
| !! | TGGGGAACAAAAGCTTGTTT+TGG | + | chr2_1:66058886-66058905 | Msa0218720:CDS | 40.0% |
| !! | GGGGAACAAAAGCTTGTTTT+GGG | + | chr2_1:66058887-66058906 | Msa0218720:CDS | 40.0% |
| !!! | TTGTTTTGGGAACCCTAAAC+AGG | + | chr2_1:66058900-66058919 | Msa0218720:CDS | 40.0% |
| !!! | TGTTTTGGGAACCCTAAACA+GGG | + | chr2_1:66058901-66058920 | Msa0218720:CDS | 40.0% |
| ! | GAGGAATTTTGTCCCTGTTT+AGG | - | chr2_1:66058916-66058935 | None:intergenic | 40.0% |
| GAAATGAACACTAGCAGCTT+TGG | - | chr2_1:66058990-66059009 | None:intergenic | 40.0% | |
| TAGGCTATTGTTGCAACACT+AGG | - | chr2_1:66059177-66059196 | None:intergenic | 40.0% | |
| TACCACAGAGCAAAATGGTA+TGG | + | chr2_1:66059549-66059568 | Msa0218720:intron | 40.0% | |
| ACCACAGAGCAAAATGGTAT+GGG | + | chr2_1:66059550-66059569 | Msa0218720:intron | 40.0% | |
| AAATGGTATGGGTTTCCTCT+TGG | + | chr2_1:66059561-66059580 | Msa0218720:intron | 40.0% | |
| AAAACCAGAACCAAAAGCAG+AGG | + | chr2_1:66059658-66059677 | Msa0218720:CDS | 40.0% | |
| ! | TTCTTGGCATCAGCCTTTTT+AGG | - | chr2_1:66059698-66059717 | None:intergenic | 40.0% |
| ! | AAATGGAAGCTCTGATGATG+AGG | + | chr2_1:66059808-66059827 | Msa0218720:CDS | 40.0% |
| GACATCATTGCCAGCAAAAA+TGG | - | chr2_1:66059878-66059897 | None:intergenic | 40.0% | |
| GTCTTCTTTATGCATGTCTG+AGG | + | chr2_1:66060037-66060056 | Msa0218720:intron | 40.0% | |
| AGATGAAGATGAGAGTGATG+AGG | + | chr2_1:66060118-66060137 | Msa0218720:CDS | 40.0% | |
| AAGCAAGCATGAATCCATGA+CGG | - | chr2_1:66060720-66060739 | None:intergenic | 40.0% | |
| TTTGGATTGAGGGTTTAGGA+GGG | - | chr2_1:66061219-66061238 | None:intergenic | 40.0% | |
| TGTGTTTGGATTGAGGGTTT+AGG | - | chr2_1:66061223-66061242 | None:intergenic | 40.0% | |
| TTAGGGTGTGTTTGGATTGA+GGG | - | chr2_1:66061229-66061248 | None:intergenic | 40.0% | |
| ! | TTTAGGGTGTGTTTGGATTG+AGG | - | chr2_1:66061230-66061249 | None:intergenic | 40.0% |
| TTGTCAGATGGTAAGAAAGC+TGG | + | chr2_1:66061369-66061388 | Msa0218720:intron | 40.0% | |
| GAGTCTTTCCACCTTTCTTA+GGG | - | chr2_1:66061413-66061432 | None:intergenic | 40.0% | |
| AGTTTCAGAGTTGAATGTCC+TGG | - | chr2_1:66061586-66061605 | None:intergenic | 40.0% | |
| !! | AGGACATTCAACTCTGAAAC+TGG | + | chr2_1:66061585-66061604 | Msa0218720:intron | 40.0% |
| GTAGTATGGTGAGTATCCTA+AGG | + | chr2_1:66061700-66061719 | Msa0218720:three_prime_UTR | 40.0% | |
| GTGAGTATCCTAAGGATGTT+AGG | + | chr2_1:66061708-66061727 | Msa0218720:three_prime_UTR | 40.0% | |
| ! | GAACATGAGGGAAAGTTTTG+TGG | + | chr2_1:66061757-66061776 | Msa0218720:three_prime_UTR | 40.0% |
| ! | TGGAAGCTGTTTGACTTTGA+TGG | + | chr2_1:66061793-66061812 | Msa0218720:three_prime_UTR | 40.0% |
| TTATGCCACTCGAGCTATAT+AGG | + | chr2_1:66061883-66061902 | Msa0218720:three_prime_UTR | 40.0% | |
| AATAGCCTATATAGCTCGAG+TGG | - | chr2_1:66061891-66061910 | None:intergenic | 40.0% | |
| !! | GAGAGTATCTAGAAACCTAG+CGG | + | chr2_1:66061966-66061985 | Msa0218720:three_prime_UTR | 40.0% |
| ! | AGAGTATCTAGAAACCTAGC+GGG | + | chr2_1:66061967-66061986 | Msa0218720:three_prime_UTR | 40.0% |
| ! | TTTGGAAGTGAGAGTGTGTG+TGG | - | chr2_1:66058312-66058331 | None:intergenic | 45.0% |
| AGGTTACCCCAAAACTCCAT+TGG | - | chr2_1:66058367-66058386 | None:intergenic | 45.0% | |
| !! | TTAGGTGCTGAGGTTAAGGT+TGG | + | chr2_1:66058651-66058670 | Msa0218720:intron | 45.0% |
| CAGCTGCTTCAAGGTCATAT+GGG | - | chr2_1:66058695-66058714 | None:intergenic | 45.0% | |
| TGTGAATAGCAGCTGCTTCA+AGG | - | chr2_1:66058704-66058723 | None:intergenic | 45.0% | |
| ! | GCTTTTGTTCCCCAACTTTG+AGG | - | chr2_1:66058880-66058899 | None:intergenic | 45.0% |
| GCTGCTAGTGTTCATTTCTG+TGG | + | chr2_1:66058992-66059011 | Msa0218720:intron | 45.0% | |
| ! | AACAGATCTGTAAGGCACCT+AGG | - | chr2_1:66059292-66059311 | None:intergenic | 45.0% |
| ! | ACCCATACCATTTTGCTCTG+TGG | - | chr2_1:66059554-66059573 | None:intergenic | 45.0% |
| !!! | TTCTCCTCTGCTTTTGGTTC+TGG | - | chr2_1:66059665-66059684 | None:intergenic | 45.0% |
| AGAACCAAAAGCAGAGGAGA+AGG | + | chr2_1:66059664-66059683 | Msa0218720:CDS | 45.0% | |
| ! | GAAACCTTCTCCTCTGCTTT+TGG | - | chr2_1:66059671-66059690 | None:intergenic | 45.0% |
| TTTAGCAGGTGCAGCATTCT+TGG | - | chr2_1:66059714-66059733 | None:intergenic | 45.0% | |
| ACAACCTTCACGTGTTTAGC+AGG | - | chr2_1:66059728-66059747 | None:intergenic | 45.0% | |
| CGTGAAGGTTGTTGATCCAA+AGG | + | chr2_1:66059736-66059755 | Msa0218720:CDS | 45.0% | |
| GAAGGTTGTTGATCCAAAGG+AGG | + | chr2_1:66059739-66059758 | Msa0218720:CDS | 45.0% | |
| TCTTCATCTTCCTCCTCCTT+TGG | - | chr2_1:66059755-66059774 | None:intergenic | 45.0% | |
| TGAGAGTGATGAGGATGATG+AGG | + | chr2_1:66060127-66060146 | Msa0218720:CDS | 45.0% | |
| GACTCCTGTGAAGAAGGTAA+TGG | + | chr2_1:66060154-66060173 | Msa0218720:intron | 45.0% | |
| ! | TGTGCCATTACCTTCTTCAC+AGG | - | chr2_1:66060161-66060180 | None:intergenic | 45.0% |
| ATATAGCCTCCCACCCTTAA+GGG | + | chr2_1:66060949-66060968 | Msa0218720:intron | 45.0% | |
| CCATCCAAACACACCCTTAA+GGG | - | chr2_1:66060965-66060984 | None:intergenic | 45.0% | |
| TCCATCCAAACACACCCTTA+AGG | - | chr2_1:66060966-66060985 | None:intergenic | 45.0% | |
| ! | TTAAGGGTGTGTTTGGATGG+AGG | + | chr2_1:66060965-66060984 | Msa0218720:intron | 45.0% |
| ! | TAAGGGTGTGTTTGGATGGA+GGG | + | chr2_1:66060966-66060985 | Msa0218720:intron | 45.0% |
| TGTGTTTGGATGGAGGGTTT+AGG | + | chr2_1:66060972-66060991 | Msa0218720:intron | 45.0% | |
| TTTGGATGGAGGGTTTAGGA+GGG | + | chr2_1:66060976-66060995 | Msa0218720:intron | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | - | chr2_1:66061218-66061237 | None:intergenic | 45.0% | |
| GTTTGGATTGAGGGTTTAGG+AGG | - | chr2_1:66061220-66061239 | None:intergenic | 45.0% | |
| TTTCCACCTTTCTTAGGGTG+AGG | - | chr2_1:66061408-66061427 | None:intergenic | 45.0% | |
| GGAGTCTTTCCACCTTTCTT+AGG | - | chr2_1:66061414-66061433 | None:intergenic | 45.0% | |
| !! | GGAGTTTTGGCATCACTGTT+AGG | - | chr2_1:66061435-66061454 | None:intergenic | 45.0% |
| TGGACTGCAACAACATAGCA+AGG | + | chr2_1:66061605-66061624 | Msa0218720:CDS | 45.0% | |
| ACTTCACTTAGCAGCATGCT+TGG | - | chr2_1:66061631-66061650 | None:intergenic | 45.0% | |
| GACAGACACCTAACATCCTT+AGG | - | chr2_1:66061719-66061738 | None:intergenic | 45.0% | |
| GAGTATCTAGAAACCTAGCG+GGG | + | chr2_1:66061968-66061987 | Msa0218720:three_prime_UTR | 45.0% | |
| !!! | TTTATTTGTTATAATTATTA+TGG | + | chr2_1:66060197-66060216 | Msa0218720:intron | 5.0% |
| GCAGCTGCTTCAAGGTCATA+TGG | - | chr2_1:66058696-66058715 | None:intergenic | 50.0% | |
| AGACAAACCAAACGAGCCTG+TGG | + | chr2_1:66058847-66058866 | Msa0218720:CDS | 50.0% | |
| !!! | TGTTTTGGCTTGCACGAGTG+AGG | + | chr2_1:66059389-66059408 | Msa0218720:intron | 50.0% |
| ACGAGTGAGGAAGGTGAAAC+TGG | + | chr2_1:66059402-66059421 | Msa0218720:intron | 50.0% | |
| TGCACCTGCTAAACACGTGA+AGG | + | chr2_1:66059721-66059740 | Msa0218720:CDS | 50.0% | |
| GGTTGTTGATCCAAAGGAGG+AGG | + | chr2_1:66059742-66059761 | Msa0218720:CDS | 50.0% | |
| GGAAGAGACTCCTGTGAAGA+AGG | + | chr2_1:66060148-66060167 | Msa0218720:CDS | 50.0% | |
| AGGTTGACCAGGGAAAGAAG+AGG | + | chr2_1:66060263-66060282 | Msa0218720:intron | 50.0% | |
| AATGCCACTCCTGAGAAGAC+TGG | + | chr2_1:66060334-66060353 | Msa0218720:CDS | 50.0% | |
| TTGGTCTCACCAGTCTTCTC+AGG | - | chr2_1:66060346-66060365 | None:intergenic | 50.0% | |
| CATATAGCCTCCCACCCTTA+AGG | + | chr2_1:66060948-66060967 | Msa0218720:intron | 50.0% | |
| CCAAACACACCCTTAAGGGT+GGG | - | chr2_1:66060961-66060980 | None:intergenic | 50.0% | |
| TCCAAACACACCCTTAAGGG+TGG | - | chr2_1:66060962-66060981 | None:intergenic | 50.0% | |
| ! | CCCTTAAGGGTGTGTTTGGA+TGG | + | chr2_1:66060962-66060981 | Msa0218720:intron | 50.0% |
| GTTTGGATGGAGGGTTTAGG+AGG | + | chr2_1:66060975-66060994 | Msa0218720:intron | 50.0% | |
| TTGGATGGAGGGTTTAGGAG+GGG | + | chr2_1:66060977-66060996 | Msa0218720:intron | 50.0% | |
| TTGAGGGTTTAGGAGGGGAA+GGG | - | chr2_1:66061213-66061232 | None:intergenic | 50.0% | |
| ATTGAGGGTTTAGGAGGGGA+AGG | - | chr2_1:66061214-66061233 | None:intergenic | 50.0% | |
| GCAACTCCTCACCCTAAGAA+AGG | + | chr2_1:66061399-66061418 | Msa0218720:CDS | 50.0% | |
| ACTCCTCACCCTAAGAAAGG+TGG | + | chr2_1:66061402-66061421 | Msa0218720:CDS | 50.0% | |
| GATGCCAAAACTCCCAAGTC+TGG | + | chr2_1:66061441-66061460 | Msa0218720:CDS | 50.0% | |
| ! | TCCTCCAGACTTGGGAGTTT+TGG | - | chr2_1:66061448-66061467 | None:intergenic | 50.0% |
| AAAACTCCCAAGTCTGGAGG+AGG | + | chr2_1:66061447-66061466 | Msa0218720:CDS | 50.0% | |
| GTGTGTGGCGTAAGAGGAAG+AGG | - | chr2_1:66058297-66058316 | None:intergenic | 55.0% | |
| ! | GAGAGTGTGTGTGGCGTAAG+AGG | - | chr2_1:66058303-66058322 | None:intergenic | 55.0% |
| !! | TTGGCTTGCACGAGTGAGGA+AGG | + | chr2_1:66059393-66059412 | Msa0218720:intron | 55.0% |
| CATTGGGCCTCTTCTTTCCC+TGG | - | chr2_1:66060273-66060292 | None:intergenic | 55.0% | |
| CTCACCAGTCTTCTCAGGAG+TGG | - | chr2_1:66060341-66060360 | None:intergenic | 55.0% | |
| AACACACCCTTAAGGGTGGG+AGG | - | chr2_1:66060958-66060977 | None:intergenic | 55.0% | |
| ! | CCCACCCTTAAGGGTGTGTT+TGG | + | chr2_1:66060958-66060977 | Msa0218720:intron | 55.0% |
| ATGGAGGGTTTAGGAGGGGA+AGG | + | chr2_1:66060981-66061000 | Msa0218720:intron | 55.0% | |
| TGGAGGGTTTAGGAGGGGAA+GGG | + | chr2_1:66060982-66061001 | Msa0218720:intron | 55.0% | |
| GCCAAAACTCCCAAGTCTGG+AGG | + | chr2_1:66061444-66061463 | Msa0218720:CDS | 55.0% | |
| GAGAGTCCTCCTCCAGACTT+GGG | - | chr2_1:66061456-66061475 | None:intergenic | 55.0% | |
| AGAGAGTCCTCCTCCAGACT+TGG | - | chr2_1:66061457-66061476 | None:intergenic | 55.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | + | chr2_1:66060985-66061004 | Msa0218720:intron | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | + | chr2_1:66060986-66061005 | Msa0218720:intron | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | + | chr2_1:66060987-66061006 | Msa0218720:intron | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | - | chr2_1:66060987-66061006 | None:intergenic | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | - | chr2_1:66060986-66061005 | None:intergenic | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | - | chr2_1:66060985-66061004 | None:intergenic | 60.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | + | chr2_1:66060990-66061009 | Msa0218720:intron | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+GGG | + | chr2_1:66060991-66061010 | Msa0218720:intron | 65.0% | |
| AGGAGGGGAAGGGAGGGGAA+GGG | - | chr2_1:66061203-66061222 | None:intergenic | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+AGG | - | chr2_1:66060991-66061010 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 66058216 | 66061996 | 66058216 | ID=Msa0218720;Name=Msa0218720 |
| chr2_1 | mRNA | 66058216 | 66061996 | 66058216 | ID=Msa0218720-mRNA-1;Parent=Msa0218720;Name=Msa0218720-mRNA-1;_AED=0.08;_eAED=0.08;_QI=151|0.87|0.88|1|1|1|9|349|274 |
| chr2_1 | exon | 66058216 | 66058379 | 66058216 | ID=Msa0218720-mRNA-1:exon:18551;Parent=Msa0218720-mRNA-1 |
| chr2_1 | exon | 66058655 | 66058731 | 66058655 | ID=Msa0218720-mRNA-1:exon:18552;Parent=Msa0218720-mRNA-1 |
| chr2_1 | exon | 66058824 | 66058998 | 66058824 | ID=Msa0218720-mRNA-1:exon:18553;Parent=Msa0218720-mRNA-1 |
| chr2_1 | exon | 66059521 | 66059565 | 66059521 | ID=Msa0218720-mRNA-1:exon:18554;Parent=Msa0218720-mRNA-1 |
| chr2_1 | exon | 66059657 | 66059829 | 66059657 | ID=Msa0218720-mRNA-1:exon:18555;Parent=Msa0218720-mRNA-1 |
| chr2_1 | exon | 66060098 | 66060169 | 66060098 | ID=Msa0218720-mRNA-1:exon:18556;Parent=Msa0218720-mRNA-1 |
| chr2_1 | exon | 66060265 | 66060355 | 66060265 | ID=Msa0218720-mRNA-1:exon:18557;Parent=Msa0218720-mRNA-1 |
| chr2_1 | exon | 66061376 | 66061493 | 66061376 | ID=Msa0218720-mRNA-1:exon:18558;Parent=Msa0218720-mRNA-1 |
| chr2_1 | exon | 66061587 | 66061996 | 66061587 | ID=Msa0218720-mRNA-1:exon:18559;Parent=Msa0218720-mRNA-1 |
| chr2_1 | five_prime_UTR | 66058216 | 66058366 | 66058216 | ID=Msa0218720-mRNA-1:five_prime_utr;Parent=Msa0218720-mRNA-1 |
| chr2_1 | CDS | 66058367 | 66058379 | 66058367 | ID=Msa0218720-mRNA-1:cds;Parent=Msa0218720-mRNA-1 |
| chr2_1 | CDS | 66058655 | 66058731 | 66058655 | ID=Msa0218720-mRNA-1:cds;Parent=Msa0218720-mRNA-1 |
| chr2_1 | CDS | 66058824 | 66058998 | 66058824 | ID=Msa0218720-mRNA-1:cds;Parent=Msa0218720-mRNA-1 |
| chr2_1 | CDS | 66059521 | 66059565 | 66059521 | ID=Msa0218720-mRNA-1:cds;Parent=Msa0218720-mRNA-1 |
| chr2_1 | CDS | 66059657 | 66059829 | 66059657 | ID=Msa0218720-mRNA-1:cds;Parent=Msa0218720-mRNA-1 |
| chr2_1 | CDS | 66060098 | 66060169 | 66060098 | ID=Msa0218720-mRNA-1:cds;Parent=Msa0218720-mRNA-1 |
| chr2_1 | CDS | 66060265 | 66060355 | 66060265 | ID=Msa0218720-mRNA-1:cds;Parent=Msa0218720-mRNA-1 |
| chr2_1 | CDS | 66061376 | 66061493 | 66061376 | ID=Msa0218720-mRNA-1:cds;Parent=Msa0218720-mRNA-1 |
| chr2_1 | CDS | 66061587 | 66061647 | 66061587 | ID=Msa0218720-mRNA-1:cds;Parent=Msa0218720-mRNA-1 |
| chr2_1 | three_prime_UTR | 66061648 | 66061996 | 66061648 | ID=Msa0218720-mRNA-1:three_prime_utr;Parent=Msa0218720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
