Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1237970 | XP_013444843.2 | 95.631 | 412 | 15 | 2 | 1 | 411 | 1 | 410 | 0.0 | 782 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1237970 | sp|Q9M2D2|YU88_ARATH | 64.894 | 376 | 124 | 2 | 39 | 407 | 32 | 406 | 1.02e-171 | 489 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1237970 | A0A396GMK3 | 95.631 | 412 | 15 | 2 | 1 | 411 | 1 | 410 | 0.0 | 782 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0610780 | Msa1237970 | 0.824472 | 7.923349e-54 | -8.615850e-47 |
| Msa0610810 | Msa1237970 | 0.804737 | 1.870796e-49 | -8.615850e-47 |
| Msa0646190 | Msa1237970 | 0.817853 | 2.658092e-52 | -8.615850e-47 |
| Msa0647320 | Msa1237970 | -0.824112 | 9.629102e-54 | -8.615850e-47 |
| Msa0651310 | Msa1237970 | 0.819047 | 1.425850e-52 | -8.615850e-47 |
| Msa0693400 | Msa1237970 | 0.801683 | 8.019015e-49 | -8.615850e-47 |
| Msa0698650 | Msa1237970 | 0.807961 | 3.914563e-50 | -8.615850e-47 |
| Msa0749150 | Msa1237970 | 0.817392 | 3.377893e-52 | -8.615850e-47 |
| Msa0792880 | Msa1237970 | 0.805348 | 1.393862e-49 | -8.615850e-47 |
| Msa0803530 | Msa1237970 | 0.858760 | 6.601088e-63 | -8.615850e-47 |
| Msa0828900 | Msa1237970 | 0.807746 | 4.347194e-50 | -8.615850e-47 |
| Msa0180100 | Msa1237970 | 0.823978 | 1.035028e-53 | -8.615850e-47 |
| Msa0184510 | Msa1237970 | 0.851043 | 1.147574e-60 | -8.615850e-47 |
| Msa0187980 | Msa1237970 | 0.827070 | 1.916601e-54 | -8.615850e-47 |
| Msa1236860 | Msa1237970 | 0.848445 | 6.100482e-60 | -8.615850e-47 |
| Msa1237970 | Msa1303760 | 0.802229 | 6.193326e-49 | -8.615850e-47 |
| Msa1237970 | Msa1315520 | -0.808860 | 2.516798e-50 | -8.615850e-47 |
| Msa1237970 | Msa1317240 | 0.812479 | 4.152819e-51 | -8.615850e-47 |
| Msa1237970 | Msa1343450 | 0.817428 | 3.314968e-52 | -8.615850e-47 |
| Msa1237970 | Msa1359890 | 0.811039 | 8.543975e-51 | -8.615850e-47 |
| Msa1237970 | Msa1382750 | 0.808722 | 2.692774e-50 | -8.615850e-47 |
| Msa1237970 | Msa1456620 | 0.808073 | 3.705326e-50 | -8.615850e-47 |
| Msa1237970 | Msa1460530 | 0.803434 | 3.492582e-49 | -8.615850e-47 |
| Msa0378310 | Msa1237970 | 0.808554 | 2.925841e-50 | -8.615850e-47 |
| Msa0404060 | Msa1237970 | 0.828677 | 7.869536e-55 | -8.615850e-47 |
| Msa0984000 | Msa1237970 | 0.803254 | 3.805654e-49 | -8.615850e-47 |
| Msa1127910 | Msa1237970 | -0.817762 | 2.787659e-52 | -8.615850e-47 |
| Msa1165820 | Msa1237970 | -0.817007 | 4.121835e-52 | -8.615850e-47 |
| Msa1173380 | Msa1237970 | 0.801002 | 1.105667e-48 | -8.615850e-47 |
| Msa1178120 | Msa1237970 | 0.881903 | 1.629821e-70 | -8.615850e-47 |
| Msa1209160 | Msa1237970 | 0.813479 | 2.506536e-51 | -8.615850e-47 |
| Msa0556070 | Msa1237970 | 0.812182 | 4.821806e-51 | -8.615850e-47 |
| Msa0561420 | Msa1237970 | 0.809894 | 1.510093e-50 | -8.615850e-47 |
| Msa0879650 | Msa1237970 | 0.825389 | 4.814040e-54 | -8.615850e-47 |
| Msa0887100 | Msa1237970 | 0.807672 | 4.508676e-50 | -8.615850e-47 |
| Msa0930210 | Msa1237970 | -0.805468 | 1.315648e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1237970 | MtrunA17_Chr8g0349011 | 95.631 | 412 | 15 | 2 | 1 | 411 | 1 | 410 | 0.0 | 782 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1237970 | AT3G61320.1 | 64.894 | 376 | 124 | 2 | 39 | 407 | 32 | 406 | 1.04e-172 | 489 |
| Msa1237970 | AT3G61320.3 | 64.894 | 376 | 124 | 2 | 39 | 407 | 93 | 467 | 7.36e-172 | 489 |
| Msa1237970 | AT2G45870.1 | 56.867 | 415 | 170 | 5 | 1 | 411 | 1 | 410 | 3.38e-161 | 460 |
| Msa1237970 | AT3G61320.4 | 66.873 | 323 | 99 | 2 | 39 | 354 | 32 | 353 | 2.07e-149 | 428 |
| Msa1237970 | AT2G45870.3 | 58.939 | 358 | 138 | 5 | 1 | 354 | 1 | 353 | 7.32e-141 | 406 |
| Msa1237970 | AT3G61320.2 | 61.265 | 253 | 90 | 2 | 39 | 284 | 93 | 344 | 1.52e-98 | 298 |
| Msa1237970 | AT2G45870.2 | 52.759 | 290 | 128 | 5 | 1 | 286 | 1 | 285 | 5.13e-92 | 280 |
Find 111 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCTTCTTGAATGTCTTTC+TGG | 0.008823 | 8_2:-17694068 | None:intergenic |
| AGTTTATATTTACATGATTA+TGG | 0.170266 | 8_2:-17694420 | None:intergenic |
| GGAAGTTAGGTTTGTGGTTT+TGG | 0.185925 | 8_2:-17690047 | None:intergenic |
| TGGCTTATGTGAACAGCTTC+TGG | 0.202848 | 8_2:+17692788 | Msa1237970:CDS |
| AGCAAAATTCTCTTCCATTT+AGG | 0.207491 | 8_2:-17694178 | None:intergenic |
| CTTCAAGGTTTCTTGTCTTA+TGG | 0.216122 | 8_2:+17692844 | Msa1237970:CDS |
| GCATTCCTCGTTCTTGGTTT+TGG | 0.221817 | 8_2:-17690228 | None:intergenic |
| TGTACGGAGGAGGGTGATTA+TGG | 0.237196 | 8_2:-17690188 | None:intergenic |
| GTTGGTTTGGTTTGGTGTTT+AGG | 0.264506 | 8_2:-17690025 | None:intergenic |
| GAATGTCTTTCTGGGCCTTC+TGG | 0.274699 | 8_2:-17694059 | None:intergenic |
| AGGAGGTGTGAGTGGCATTT+TGG | 0.275700 | 8_2:-17690079 | None:intergenic |
| GAGCATTCGGCTACTAAAAT+TGG | 0.278019 | 8_2:+17692511 | Msa1237970:CDS |
| CACTCTACAACCACACAAAC+TGG | 0.292794 | 8_2:+17690263 | Msa1237970:CDS |
| AAATCTATCCATAGTGCTTT+AGG | 0.304951 | 8_2:+17694355 | Msa1237970:three_prime_UTR |
| TCCTGCTCTTGCGTTGCTAT+TGG | 0.308883 | 8_2:+17690492 | Msa1237970:CDS |
| GGCTTCTTGAATGTCTTTCT+GGG | 0.318748 | 8_2:-17694067 | None:intergenic |
| TTGGAGTGAATTGGGAAGTT+AGG | 0.325163 | 8_2:-17690060 | None:intergenic |
| TCCTAAAGAAATTGTCAATC+TGG | 0.326102 | 8_2:-17694323 | None:intergenic |
| CATATACCCGTCTGACTTCA+AGG | 0.326231 | 8_2:+17692829 | Msa1237970:CDS |
| TGGCTGGCCTAGCTCCTAAA+TGG | 0.330706 | 8_2:+17694164 | Msa1237970:exon |
| AAGGGAGGAGGGTTAGTTGT+TGG | 0.336660 | 8_2:-17690102 | None:intergenic |
| GAGAGTGTTGAGAATATTAA+TGG | 0.343477 | 8_2:-17689965 | None:intergenic |
| ACTTGTTTCCATGATGGAAT+TGG | 0.348735 | 8_2:+17692768 | Msa1237970:CDS |
| CAATCATCCCAAAGTATGAT+AGG | 0.352692 | 8_2:-17692879 | None:intergenic |
| CGGGTATATGATAACGGAAT+TGG | 0.357046 | 8_2:-17692816 | None:intergenic |
| CAAAGAGGCAGCACTGATAA+AGG | 0.360465 | 8_2:-17692925 | None:intergenic |
| TACTTTGGGATGATTGTCAT+TGG | 0.371618 | 8_2:+17692886 | Msa1237970:CDS |
| ACCAGATTGACAATTTCTTT+AGG | 0.379257 | 8_2:+17694322 | Msa1237970:three_prime_UTR |
| GGAGGGTTAGTTGTTGGAGG+AGG | 0.392317 | 8_2:-17690096 | None:intergenic |
| CGTCTGGTTCCATTACTTGC+CGG | 0.396905 | 8_2:+17690420 | Msa1237970:CDS |
| GACGCTCCCTATCATACTTT+GGG | 0.402973 | 8_2:+17692872 | Msa1237970:CDS |
| AACAATACCTTAAGAACAAT+AGG | 0.408673 | 8_2:-17690685 | None:intergenic |
| TGACGCTCCCTATCATACTT+TGG | 0.409664 | 8_2:+17692871 | Msa1237970:CDS |
| AAATTGGTTGGTGTGGTTGG+TGG | 0.413308 | 8_2:-17689917 | None:intergenic |
| AATATACTCCTAAAGCACTA+TGG | 0.425954 | 8_2:-17694363 | None:intergenic |
| GAACCAGACGGCGGAGTTGT+AGG | 0.427709 | 8_2:-17690407 | None:intergenic |
| GGCTTATGTGAACAGCTTCT+GGG | 0.429998 | 8_2:+17692789 | Msa1237970:CDS |
| AGTTTATATCGCAGAGCATT+CGG | 0.432821 | 8_2:+17692498 | Msa1237970:CDS |
| GCAGGAGCAGTAAGCTGATA+AGG | 0.432959 | 8_2:-17690475 | None:intergenic |
| AAAGAAGTGAAGAAGAGAAC+AGG | 0.435786 | 8_2:-17690367 | None:intergenic |
| TTAAGTGCAAGCATTGGAAA+TGG | 0.446400 | 8_2:-17694027 | None:intergenic |
| TAGCCACATTAATTGTGGTT+AGG | 0.453740 | 8_2:+17694256 | Msa1237970:three_prime_UTR |
| GGTGAAGAAGAGAGGGGAGT+TGG | 0.456587 | 8_2:-17689944 | None:intergenic |
| GTTTGGTTTGGTGTTTAGGA+TGG | 0.457366 | 8_2:-17690021 | None:intergenic |
| AATTGGTTGGTGTGGTTGGT+GGG | 0.461883 | 8_2:-17689916 | None:intergenic |
| TTCTCTTCCATTTAGGAGCT+AGG | 0.463417 | 8_2:-17694171 | None:intergenic |
| CCGCCTACAACTCCGCCGTC+TGG | 0.465961 | 8_2:+17690404 | Msa1237970:CDS |
| GGAGGAGGGTTAGTTGTTGG+AGG | 0.476818 | 8_2:-17690099 | None:intergenic |
| GAATTGGGAAGTTAGGTTTG+TGG | 0.478696 | 8_2:-17690053 | None:intergenic |
| ACTGTTGATGTCAGTGGGAA+GGG | 0.479910 | 8_2:+17690616 | Msa1237970:CDS |
| TATTAATGGTGAAGAAGAGA+GGG | 0.480423 | 8_2:-17689951 | None:intergenic |
| AAGATCACTTGTTTCCATGA+TGG | 0.486583 | 8_2:+17692762 | Msa1237970:CDS |
| ATGCAGTGTCATGTGTTGTA+TGG | 0.487229 | 8_2:+17692383 | Msa1237970:intron |
| TCCTCCGTACAATCCCAGAC+TGG | 0.489039 | 8_2:+17690200 | Msa1237970:CDS |
| AGTGAAGAAGCTCGTAGCAC+AGG | 0.490881 | 8_2:-17690451 | None:intergenic |
| ACCAATAGCAACGCAAGAGC+AGG | 0.492418 | 8_2:-17690493 | None:intergenic |
| TTGTTGAAGGGAAGAAAGCT+TGG | 0.502301 | 8_2:+17690545 | Msa1237970:CDS |
| TCTAAAGAGCATTCACCAAA+TGG | 0.503162 | 8_2:+17694144 | Msa1237970:CDS |
| ATTGAGATGGTGAAGAGAAG+AGG | 0.503521 | 8_2:-17689995 | None:intergenic |
| TCTTATGCTAGATTTGTTGA+AGG | 0.508587 | 8_2:+17690532 | Msa1237970:CDS |
| CATTCGGCTACTAAAATTGG+AGG | 0.521365 | 8_2:+17692514 | Msa1237970:CDS |
| CTGCCCAGTCTGGGATTGTA+CGG | 0.524923 | 8_2:-17690204 | None:intergenic |
| AAGCACTATGGATAGATTTG+AGG | 0.528579 | 8_2:-17694351 | None:intergenic |
| TTGTATAGCCACATTAATTG+TGG | 0.530594 | 8_2:+17694251 | Msa1237970:three_prime_UTR |
| AGTCTGGGATTGTACGGAGG+AGG | 0.530882 | 8_2:-17690198 | None:intergenic |
| TACTGTTGATGTCAGTGGGA+AGG | 0.531531 | 8_2:+17690615 | Msa1237970:CDS |
| GGATTCTAGAAGAAGCATCT+TGG | 0.535842 | 8_2:+17692535 | Msa1237970:CDS |
| GTAGGTTGGAGTTCTTATAG+AGG | 0.537255 | 8_2:+17694002 | Msa1237970:intron |
| GTTGTTGGAGGAGGTGTGAG+TGG | 0.538608 | 8_2:-17690087 | None:intergenic |
| GTCAGACGGGTATATGATAA+CGG | 0.542929 | 8_2:-17692822 | None:intergenic |
| ATATTAATGGTGAAGAAGAG+AGG | 0.546956 | 8_2:-17689952 | None:intergenic |
| GCACGTGACGGAGGGAGGAA+CGG | 0.547211 | 8_2:-17690294 | None:intergenic |
| AAGAGCATTCACCAAATGGC+TGG | 0.548531 | 8_2:+17694148 | Msa1237970:CDS |
| GCTTTGCAACAAGGTGCGCA+TGG | 0.549025 | 8_2:-17694110 | None:intergenic |
| AGTATATTCTGCTAATGTAG+TGG | 0.549596 | 8_2:+17694378 | Msa1237970:three_prime_UTR |
| CTTATGCTAGATTTGTTGAA+GGG | 0.552693 | 8_2:+17690533 | Msa1237970:CDS |
| GCAGCACTGATAAAGGTAGC+AGG | 0.553615 | 8_2:-17692918 | None:intergenic |
| GGAGTTGTAGGCGGCGATGA+CGG | 0.556970 | 8_2:-17690395 | None:intergenic |
| CACATAAGCCAATTCCATCA+TGG | 0.557282 | 8_2:-17692776 | None:intergenic |
| AAAGTGACGCACGTGACGGA+GGG | 0.559488 | 8_2:-17690302 | None:intergenic |
| GTATATTCTGCTAATGTAGT+GGG | 0.565506 | 8_2:+17694379 | Msa1237970:three_prime_UTR |
| GAAGTGAAGAAGAGAACAGG+AGG | 0.569132 | 8_2:-17690364 | None:intergenic |
| AGATCATTAAGTGCAAGCAT+TGG | 0.571323 | 8_2:-17694033 | None:intergenic |
| CAAGAAACCTTGAAGTCAGA+CGG | 0.571712 | 8_2:-17692836 | None:intergenic |
| TTTAGGATGGTACATTGAGA+TGG | 0.571874 | 8_2:-17690008 | None:intergenic |
| AATCATCCCAAAGTATGATA+GGG | 0.572755 | 8_2:-17692878 | None:intergenic |
| TGGCTACTGTTGATGTCAGT+GGG | 0.573291 | 8_2:+17690611 | Msa1237970:CDS |
| GGTAGTTTCGCTTTGCAACA+AGG | 0.575709 | 8_2:-17694119 | None:intergenic |
| TTGGTGAATGCTCTTTAGAG+TGG | 0.597298 | 8_2:-17694140 | None:intergenic |
| ACTCTACAACCACACAAACT+GGG | 0.602994 | 8_2:+17690264 | Msa1237970:CDS |
| GTCTGGGATTGTACGGAGGA+GGG | 0.608407 | 8_2:-17690197 | None:intergenic |
| GTGACGCACGTGACGGAGGG+AGG | 0.608794 | 8_2:-17690299 | None:intergenic |
| AAGAAACCTTGAAGTCAGAC+GGG | 0.609157 | 8_2:-17692835 | None:intergenic |
| AAAAGTGACGCACGTGACGG+AGG | 0.611743 | 8_2:-17690303 | None:intergenic |
| ATGGCTACTGTTGATGTCAG+TGG | 0.612427 | 8_2:+17690610 | Msa1237970:CDS |
| ACTTAATGATCTCTGCCAGA+AGG | 0.623032 | 8_2:+17694044 | Msa1237970:CDS |
| GTTCCTAACCACAATTAATG+TGG | 0.626611 | 8_2:-17694259 | None:intergenic |
| GTTGATGTCAGTGGGAAGGG+TGG | 0.633881 | 8_2:+17690619 | Msa1237970:CDS |
| ATTAATGGTGAAGAAGAGAG+GGG | 0.635625 | 8_2:-17689950 | None:intergenic |
| TTCTTCAATGCAGAACAAAG+AGG | 0.637682 | 8_2:-17692940 | None:intergenic |
| GTTGTAGGCGGCGATGACGG+CGG | 0.641211 | 8_2:-17690392 | None:intergenic |
| GGTGTGTGACCCAGTTTGTG+TGG | 0.646028 | 8_2:-17690273 | None:intergenic |
| GAACAGGAGGGACTAAAGAG+AGG | 0.649071 | 8_2:-17690351 | None:intergenic |
| CCCAGTCTGGGATTGTACGG+AGG | 0.658078 | 8_2:-17690201 | None:intergenic |
| CCAGACGGCGGAGTTGTAGG+CGG | 0.663842 | 8_2:-17690404 | None:intergenic |
| AAGTGAAGAAGAGAACAGGA+GGG | 0.692777 | 8_2:-17690363 | None:intergenic |
| TAAAGAGAGGATGACACGTG+AGG | 0.708230 | 8_2:-17690338 | None:intergenic |
| CAAGTAATGGAACCAGACGG+CGG | 0.715460 | 8_2:-17690416 | None:intergenic |
| CGGCAAGTAATGGAACCAGA+CGG | 0.716242 | 8_2:-17690419 | None:intergenic |
| GCAGACCAAAACCAAGAACG+AGG | 0.744295 | 8_2:+17690223 | Msa1237970:CDS |
| ATAAACTCAATAATGCAGCG+AGG | 0.783535 | 8_2:-17692482 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAAAATCAATTTTTTTTTA+TGG | - | chr8_2:17691837-17691856 | None:intergenic | 10.0% |
| !! | TATACCAAATATTTAATATA+AGG | - | chr8_2:17693586-17693605 | None:intergenic | 10.0% |
| !! | ATTAAATATTTGGTATATTA+TGG | + | chr8_2:17693589-17693608 | Msa1237970:intron | 10.0% |
| !!! | AAAATTTCAATAATTACTTT+TGG | - | chr8_2:17693910-17693929 | None:intergenic | 10.0% |
| !!! | ATAATCCATGTTTTAATTTA+TGG | + | chr8_2:17691230-17691249 | Msa1237970:intron | 15.0% |
| !!! | ATTCCATTTAATTTATTTCA+AGG | + | chr8_2:17691603-17691622 | Msa1237970:intron | 15.0% |
| !!! | TTTTTTTAGTTGTAATTGAT+GGG | + | chr8_2:17692334-17692353 | Msa1237970:intron | 15.0% |
| !! | TTGATATATTTAAATAGTCT+AGG | - | chr8_2:17692990-17693009 | None:intergenic | 15.0% |
| !!! | GATGATAGTTTTTTTTTTTA+AGG | + | chr8_2:17693086-17693105 | Msa1237970:intron | 15.0% |
| !! | AAAAAAATGTCTAAATTTGT+TGG | - | chr8_2:17693329-17693348 | None:intergenic | 15.0% |
| !!! | AATTTTTTTGGAATATCTTA+TGG | + | chr8_2:17693551-17693570 | Msa1237970:intron | 15.0% |
| !! | AGTTTATATTTACATGATTA+TGG | - | chr8_2:17694423-17694442 | None:intergenic | 15.0% |
| !! | TTATAACATACTATTGTGTT+TGG | - | chr8_2:17691070-17691089 | None:intergenic | 20.0% |
| !!! | ATAGAGTTTTTAAATTGTTG+AGG | + | chr8_2:17691533-17691552 | Msa1237970:intron | 20.0% |
| !!! | TAGAGTTTTTAAATTGTTGA+GGG | + | chr8_2:17691534-17691553 | Msa1237970:intron | 20.0% |
| !! | CATCCTTGAAATAAATTAAA+TGG | - | chr8_2:17691609-17691628 | None:intergenic | 20.0% |
| !!! | TTGATTTTTGTATGCTAATT+TGG | + | chr8_2:17691847-17691866 | Msa1237970:intron | 20.0% |
| !! | AAATAAGTTCTATGTTTGTT+GGG | + | chr8_2:17692008-17692027 | Msa1237970:intron | 20.0% |
| !!! | CTTTTTTTAGTTGTAATTGA+TGG | + | chr8_2:17692333-17692352 | Msa1237970:intron | 20.0% |
| !! | ACAAAACTACATATTGAATT+TGG | + | chr8_2:17692582-17692601 | Msa1237970:intron | 20.0% |
| !! | CAAAACTACATATTGAATTT+GGG | + | chr8_2:17692583-17692602 | Msa1237970:intron | 20.0% |
| !!! | AATTAATTTTAGGGTAGTTT+TGG | + | chr8_2:17693212-17693231 | Msa1237970:intron | 20.0% |
| !! | ACAAACAAATGTTAAAAGAT+AGG | + | chr8_2:17693467-17693486 | Msa1237970:intron | 20.0% |
| !! | CTCTCCTTATATTAAATATT+TGG | + | chr8_2:17693579-17693598 | Msa1237970:intron | 20.0% |
| !! | TTCATCTGTTAAAATAGATT+TGG | + | chr8_2:17693749-17693768 | Msa1237970:intron | 20.0% |
| !! | TTCATCTGTTAAAATAGATT+TGG | + | chr8_2:17693749-17693768 | Msa1237970:intron | 20.0% |
| !!! | AATTTTCACTGTTAAAATGA+TGG | + | chr8_2:17693924-17693943 | Msa1237970:intron | 20.0% |
| !! | ATTATGGTTTTTATTGGTGT+GGG | - | chr8_2:17690175-17690194 | None:intergenic | 25.0% |
| ! | AACAATACCTTAAGAACAAT+AGG | - | chr8_2:17690688-17690707 | None:intergenic | 25.0% |
| !!! | TCATAGATATTTTTTGTCAG+AGG | + | chr8_2:17690752-17690771 | Msa1237970:intron | 25.0% |
| ! | ACTTACAACTAATGTAATAC+TGG | - | chr8_2:17690851-17690870 | None:intergenic | 25.0% |
| !!! | CGCTTATGTTTTATTATTAC+AGG | - | chr8_2:17690981-17691000 | None:intergenic | 25.0% |
| ! | TTGAATGTAAACACATAAGT+TGG | + | chr8_2:17691002-17691021 | Msa1237970:intron | 25.0% |
| ! | CAATAGTATGTTATAAGCTA+TGG | + | chr8_2:17691074-17691093 | Msa1237970:intron | 25.0% |
| ! | AGCAACCATAAATTAAAACA+TGG | - | chr8_2:17691238-17691257 | None:intergenic | 25.0% |
| ! | TATAAAAGACTTAGATTTCG+TGG | + | chr8_2:17691334-17691353 | Msa1237970:intron | 25.0% |
| ! | AGTCTATAGTTACAACAATT+TGG | - | chr8_2:17691361-17691380 | None:intergenic | 25.0% |
| !! | TATTGGGTATTCTTCAATTT+TGG | + | chr8_2:17691499-17691518 | Msa1237970:intron | 25.0% |
| !! | TATTTCAAGGATGATTTTGA+AGG | + | chr8_2:17691616-17691635 | Msa1237970:intron | 25.0% |
| !! | ATTTCAAGGATGATTTTGAA+GGG | + | chr8_2:17691617-17691636 | Msa1237970:intron | 25.0% |
| !!! | TGTTGAAATTGTTTTGTTCT+GGG | + | chr8_2:17691761-17691780 | Msa1237970:intron | 25.0% |
| !! | TTTTTGTATGCTAATTTGGA+AGG | + | chr8_2:17691851-17691870 | Msa1237970:intron | 25.0% |
| ! | CAAATAAGTTCTATGTTTGT+TGG | + | chr8_2:17692007-17692026 | Msa1237970:intron | 25.0% |
| !!! | TCCTTTTTTTTTCTTCTCAA+CGG | + | chr8_2:17692135-17692154 | Msa1237970:intron | 25.0% |
| ! | CTGCATTCAAATTATTCAAA+TGG | - | chr8_2:17692369-17692388 | None:intergenic | 25.0% |
| !! | AGGAAATAAATTTTCGTTTC+TGG | - | chr8_2:17692638-17692657 | None:intergenic | 25.0% |
| ! | GAAACGAAAATTTATTTCCT+TGG | + | chr8_2:17692638-17692657 | Msa1237970:intron | 25.0% |
| !! | AATTTATTTCCTTGGTAATC+AGG | + | chr8_2:17692646-17692665 | Msa1237970:intron | 25.0% |
| ! | TAATCTACCCCTAATTATAA+TGG | + | chr8_2:17693167-17693186 | Msa1237970:intron | 25.0% |
| !! | TCTTTTCTTTGTAATTCATC+AGG | + | chr8_2:17693425-17693444 | Msa1237970:intron | 25.0% |
| !!! | AGTGGACTGTATAATTTTTT+TGG | + | chr8_2:17693539-17693558 | Msa1237970:intron | 25.0% |
| !!! | AAATTAAAGTCTCTAGCTTT+GGG | - | chr8_2:17693641-17693660 | None:intergenic | 25.0% |
| ! | CTTGTGTGATTTCAATAATA+TGG | - | chr8_2:17693697-17693716 | None:intergenic | 25.0% |
| ! | CTTGTGTGATTTCAATAATA+TGG | - | chr8_2:17693697-17693716 | None:intergenic | 25.0% |
| ! | ATGTGAAAAATGATTGATGT+AGG | + | chr8_2:17693984-17694003 | Msa1237970:intron | 25.0% |
| TATTAATGGTGAAGAAGAGA+GGG | - | chr8_2:17689954-17689973 | None:intergenic | 30.0% | |
| ATATTAATGGTGAAGAAGAG+AGG | - | chr8_2:17689955-17689974 | None:intergenic | 30.0% | |
| !! | GAGAGTGTTGAGAATATTAA+TGG | - | chr8_2:17689968-17689987 | None:intergenic | 30.0% |
| ! | TTATGGTTTTTATTGGTGTG+GGG | - | chr8_2:17690174-17690193 | None:intergenic | 30.0% |
| ! | GATTATGGTTTTTATTGGTG+TGG | - | chr8_2:17690176-17690195 | None:intergenic | 30.0% |
| ! | AGGGTGATTATGGTTTTTAT+TGG | - | chr8_2:17690181-17690200 | None:intergenic | 30.0% |
| !! | TCTTATGCTAGATTTGTTGA+AGG | + | chr8_2:17690532-17690551 | Msa1237970:CDS | 30.0% |
| !! | CTTATGCTAGATTTGTTGAA+GGG | + | chr8_2:17690533-17690552 | Msa1237970:CDS | 30.0% |
| !!! | TGATTTTGCTAGACTTGTTA+TGG | + | chr8_2:17690591-17690610 | Msa1237970:CDS | 30.0% |
| ! | TGCTTTTCCTATTGTTCTTA+AGG | + | chr8_2:17690678-17690697 | Msa1237970:CDS | 30.0% |
| ! | ATCTGAGGTCAAATAGATAT+TGG | + | chr8_2:17691482-17691501 | Msa1237970:intron | 30.0% |
| ! | TCTGAGGTCAAATAGATATT+GGG | + | chr8_2:17691483-17691502 | Msa1237970:intron | 30.0% |
| ! | GTTTTTAAATTGTTGAGGGT+TGG | + | chr8_2:17691538-17691557 | Msa1237970:intron | 30.0% |
| TGTACAAGATAGTTCAATTG+TGG | + | chr8_2:17691575-17691594 | Msa1237970:intron | 30.0% | |
| !! | ATTTTGAAGGGTTATCTGTA+AGG | + | chr8_2:17691629-17691648 | Msa1237970:intron | 30.0% |
| !! | CATACTAGTTCTATGTTTGT+TGG | + | chr8_2:17691707-17691726 | Msa1237970:intron | 30.0% |
| !! | GTGTTGAAATTGTTTTGTTC+TGG | + | chr8_2:17691760-17691779 | Msa1237970:intron | 30.0% |
| TTAAGGTCAGAATTGTTTGA+TGG | + | chr8_2:17691800-17691819 | Msa1237970:intron | 30.0% | |
| !! | TAATTTGGAAGGTGTTTGTT+AGG | + | chr8_2:17691862-17691881 | Msa1237970:intron | 30.0% |
| ACCGTTGAGAAGAAAAAAAA+AGG | - | chr8_2:17692139-17692158 | None:intergenic | 30.0% | |
| TACCAACTCAAAAAAAACCT+TGG | - | chr8_2:17692178-17692197 | None:intergenic | 30.0% | |
| !! | AGTTGGTAATTGTTGTTGAT+GGG | + | chr8_2:17692190-17692209 | Msa1237970:intron | 30.0% |
| !! | TCTCTAGAGTCTATATCATT+GGG | - | chr8_2:17692274-17692293 | None:intergenic | 30.0% |
| !! | TTCTCTAGAGTCTATATCAT+TGG | - | chr8_2:17692275-17692294 | None:intergenic | 30.0% |
| AATTTGTATCCAACACTTCT+TGG | - | chr8_2:17692672-17692691 | None:intergenic | 30.0% | |
| TTCAAACATTTCCCTATTTG+CGG | + | chr8_2:17692728-17692747 | Msa1237970:intron | 30.0% | |
| AATCATCCCAAAGTATGATA+GGG | - | chr8_2:17692881-17692900 | None:intergenic | 30.0% | |
| ! | AATAGTCTAGGATTGAAGTA+AGG | - | chr8_2:17692978-17692997 | None:intergenic | 30.0% |
| ! | TGAAAGTAGGTATTTTCTGA+TGG | - | chr8_2:17693055-17693074 | None:intergenic | 30.0% |
| CAGATGACCATTATAATTAG+GGG | - | chr8_2:17693177-17693196 | None:intergenic | 30.0% | |
| GCAGATGACCATTATAATTA+GGG | - | chr8_2:17693178-17693197 | None:intergenic | 30.0% | |
| AGCAGATGACCATTATAATT+AGG | - | chr8_2:17693179-17693198 | None:intergenic | 30.0% | |
| TTTCTTTGTAATTCATCAGG+TGG | + | chr8_2:17693428-17693447 | Msa1237970:intron | 30.0% | |
| ! | CAAATTAAAGTCTCTAGCTT+TGG | - | chr8_2:17693642-17693661 | None:intergenic | 30.0% |
| !! | GTTTTGCACTGATAGAAATT+TGG | + | chr8_2:17693661-17693680 | Msa1237970:intron | 30.0% |
| ATGGTCTTCAGTTTAGATTT+GGG | - | chr8_2:17693783-17693802 | None:intergenic | 30.0% | |
| TATGGTCTTCAGTTTAGATT+TGG | - | chr8_2:17693784-17693803 | None:intergenic | 30.0% | |
| GAAAAATGATTGATGTAGGT+TGG | + | chr8_2:17693988-17694007 | Msa1237970:intron | 30.0% | |
| AGCAAAATTCTCTTCCATTT+AGG | - | chr8_2:17694181-17694200 | None:intergenic | 30.0% | |
| ! | AATGGAAGAGAATTTTGCTT+TGG | + | chr8_2:17694182-17694201 | Msa1237970:exon | 30.0% |
| ! | TTCTTCAACTTTTGCTTATG+AGG | + | chr8_2:17694210-17694229 | Msa1237970:three_prime_UTR | 30.0% |
| TTGTATAGCCACATTAATTG+TGG | + | chr8_2:17694251-17694270 | Msa1237970:three_prime_UTR | 30.0% | |
| ACCAGATTGACAATTTCTTT+AGG | + | chr8_2:17694322-17694341 | Msa1237970:three_prime_UTR | 30.0% | |
| TCCTAAAGAAATTGTCAATC+TGG | - | chr8_2:17694326-17694345 | None:intergenic | 30.0% | |
| AAATCTATCCATAGTGCTTT+AGG | + | chr8_2:17694355-17694374 | Msa1237970:three_prime_UTR | 30.0% | |
| ! | AATATACTCCTAAAGCACTA+TGG | - | chr8_2:17694366-17694385 | None:intergenic | 30.0% |
| AGTATATTCTGCTAATGTAG+TGG | + | chr8_2:17694378-17694397 | Msa1237970:three_prime_UTR | 30.0% | |
| GTATATTCTGCTAATGTAGT+GGG | + | chr8_2:17694379-17694398 | Msa1237970:three_prime_UTR | 30.0% | |
| ! | TAAAAATTGGTTGGTGTGGT+TGG | - | chr8_2:17689923-17689942 | None:intergenic | 35.0% |
| ! | TGGTTAAAAATTGGTTGGTG+TGG | - | chr8_2:17689927-17689946 | None:intergenic | 35.0% |
| ! | GGAGTTGGTTAAAAATTGGT+TGG | - | chr8_2:17689932-17689951 | None:intergenic | 35.0% |
| ATTAATGGTGAAGAAGAGAG+GGG | - | chr8_2:17689953-17689972 | None:intergenic | 35.0% | |
| ! | TTTAGGATGGTACATTGAGA+TGG | - | chr8_2:17690011-17690030 | None:intergenic | 35.0% |
| !! | GTTTGTAGGATTTTGAGGAA+GGG | - | chr8_2:17690123-17690142 | None:intergenic | 35.0% |
| !! | TGTTTGTAGGATTTTGAGGA+AGG | - | chr8_2:17690124-17690143 | None:intergenic | 35.0% |
| !!! | AGGTGTTGAACATTTTATGG+GGG | - | chr8_2:17690149-17690168 | None:intergenic | 35.0% |
| !!! | GAGGTGTTGAACATTTTATG+GGG | - | chr8_2:17690150-17690169 | None:intergenic | 35.0% |
| !!! | GGAGGTGTTGAACATTTTAT+GGG | - | chr8_2:17690151-17690170 | None:intergenic | 35.0% |
| ! | TATGGTTTTTATTGGTGTGG+GGG | - | chr8_2:17690173-17690192 | None:intergenic | 35.0% |
| !!! | TTTTTTGCATTCCTCGTTCT+TGG | - | chr8_2:17690237-17690256 | None:intergenic | 35.0% |
| AAAGAAGTGAAGAAGAGAAC+AGG | - | chr8_2:17690370-17690389 | None:intergenic | 35.0% | |
| CTATGTCTTAGTGTTATGTC+TGG | - | chr8_2:17690825-17690844 | None:intergenic | 35.0% | |
| !!! | AATCTGAGGCTCTAAAGTTT+TGG | + | chr8_2:17690910-17690929 | Msa1237970:intron | 35.0% |
| !!! | GGCTCTAAAGTTTTGGTATA+AGG | + | chr8_2:17690917-17690936 | Msa1237970:intron | 35.0% |
| TGTTATAAGCTATGGAACAC+AGG | + | chr8_2:17691082-17691101 | Msa1237970:intron | 35.0% | |
| ! | TTTTCCCATTGCCTACATAT+CGG | - | chr8_2:17691116-17691135 | None:intergenic | 35.0% |
| ATATGTAGGCAATGGGAAAA+TGG | + | chr8_2:17691116-17691135 | Msa1237970:intron | 35.0% | |
| TATGTAGGCAATGGGAAAAT+GGG | + | chr8_2:17691117-17691136 | Msa1237970:intron | 35.0% | |
| TCAAGTGAAATCACACATGT+CGG | + | chr8_2:17691145-17691164 | Msa1237970:intron | 35.0% | |
| AAAGGTGACTGTGATATACT+AGG | - | chr8_2:17691278-17691297 | None:intergenic | 35.0% | |
| GATTGGGATTAAGTTCACAA+AGG | - | chr8_2:17691296-17691315 | None:intergenic | 35.0% | |
| ACTTAATCCCAATCGCATTA+CGG | + | chr8_2:17691302-17691321 | Msa1237970:intron | 35.0% | |
| ATCAAGAAGCTAATTCAACC+TGG | + | chr8_2:17691428-17691447 | Msa1237970:intron | 35.0% | |
| TCAAGAAGCTAATTCAACCT+GGG | + | chr8_2:17691429-17691448 | Msa1237970:intron | 35.0% | |
| GTTGGATTGTTAGTTATCTG+AGG | + | chr8_2:17691467-17691486 | Msa1237970:intron | 35.0% | |
| ! | AACTGTTCACACTTTGAAGA+AGG | - | chr8_2:17691666-17691685 | None:intergenic | 35.0% |
| TTCTTCAAAGTGTGAACAGT+TGG | + | chr8_2:17691665-17691684 | Msa1237970:intron | 35.0% | |
| TCTTCAAAGTGTGAACAGTT+GGG | + | chr8_2:17691666-17691685 | Msa1237970:intron | 35.0% | |
| ! | TTAGGTTTCGATCAAGTTGT+GGG | + | chr8_2:17691880-17691899 | Msa1237970:intron | 35.0% |
| AGACTAAGTTCCATGTTTGT+TGG | + | chr8_2:17692109-17692128 | Msa1237970:intron | 35.0% | |
| GACTAAGTTCCATGTTTGTT+GGG | + | chr8_2:17692110-17692129 | Msa1237970:intron | 35.0% | |
| !!! | CTCCAAGGTTTTTTTTGAGT+TGG | + | chr8_2:17692173-17692192 | Msa1237970:intron | 35.0% |
| !! | GAGTTGGTAATTGTTGTTGA+TGG | + | chr8_2:17692189-17692208 | Msa1237970:intron | 35.0% |
| CGGAACTATTCTGAACAAAA+TGG | - | chr8_2:17692225-17692244 | None:intergenic | 35.0% | |
| AGAATAGTTCCGTGTTTGAT+CGG | + | chr8_2:17692233-17692252 | Msa1237970:intron | 35.0% | |
| ATATCATTGGGGAAAAAACG+AGG | - | chr8_2:17692262-17692281 | None:intergenic | 35.0% | |
| !! | CTCTAGAGTCTATATCATTG+GGG | - | chr8_2:17692273-17692292 | None:intergenic | 35.0% |
| ATAAACTCAATAATGCAGCG+AGG | - | chr8_2:17692485-17692504 | None:intergenic | 35.0% | |
| ! | AGTTTATATCGCAGAGCATT+CGG | + | chr8_2:17692498-17692517 | Msa1237970:CDS | 35.0% |
| AAGATCACTTGTTTCCATGA+TGG | + | chr8_2:17692762-17692781 | Msa1237970:CDS | 35.0% | |
| ! | ACTTGTTTCCATGATGGAAT+TGG | + | chr8_2:17692768-17692787 | Msa1237970:CDS | 35.0% |
| CTTCAAGGTTTCTTGTCTTA+TGG | + | chr8_2:17692844-17692863 | Msa1237970:CDS | 35.0% | |
| CAATCATCCCAAAGTATGAT+AGG | - | chr8_2:17692882-17692901 | None:intergenic | 35.0% | |
| !! | TACTTTGGGATGATTGTCAT+TGG | + | chr8_2:17692886-17692905 | Msa1237970:CDS | 35.0% |
| TTCTTCAATGCAGAACAAAG+AGG | - | chr8_2:17692943-17692962 | None:intergenic | 35.0% | |
| ! | TATTTTCTGATGGTTGAGTC+CGG | - | chr8_2:17693045-17693064 | None:intergenic | 35.0% |
| ACCTACTTTCACACTTACTA+AGG | + | chr8_2:17693064-17693083 | Msa1237970:intron | 35.0% | |
| TCCTTAGTAAGTGTGAAAGT+AGG | - | chr8_2:17693068-17693087 | None:intergenic | 35.0% | |
| GTGTAATAGTCTAAAGATCC+TGG | - | chr8_2:17693395-17693414 | None:intergenic | 35.0% | |
| ! | AGCAGTTAGATTTTTGTGAG+TGG | + | chr8_2:17693521-17693540 | Msa1237970:intron | 35.0% |
| ! | TATATTATGGACTGCACTTC+TGG | + | chr8_2:17693602-17693621 | Msa1237970:intron | 35.0% |
| ATTCTACAGTCTGTTCTGTT+TGG | - | chr8_2:17693723-17693742 | None:intergenic | 35.0% | |
| TGGTCTTCAGTTTAGATTTG+GGG | - | chr8_2:17693782-17693801 | None:intergenic | 35.0% | |
| ATTCTACAGTCTGTTCTGTT+TGG | - | chr8_2:17693723-17693742 | None:intergenic | 35.0% | |
| CAGAGTTCAGTTTAGATTTG+GGG | - | chr8_2:17693887-17693906 | None:intergenic | 35.0% | |
| GCAGAGTTCAGTTTAGATTT+GGG | - | chr8_2:17693888-17693907 | None:intergenic | 35.0% | |
| !! | TTAAGTGCAAGCATTGGAAA+TGG | - | chr8_2:17694030-17694049 | None:intergenic | 35.0% |
| AGATCATTAAGTGCAAGCAT+TGG | - | chr8_2:17694036-17694055 | None:intergenic | 35.0% | |
| !! | TCTAAAGAGCATTCACCAAA+TGG | + | chr8_2:17694144-17694163 | Msa1237970:CDS | 35.0% |
| ! | TTCAACTTTTGCTTATGAGG+TGG | + | chr8_2:17694213-17694232 | Msa1237970:three_prime_UTR | 35.0% |
| TAGCCACATTAATTGTGGTT+AGG | + | chr8_2:17694256-17694275 | Msa1237970:three_prime_UTR | 35.0% | |
| GTTCCTAACCACAATTAATG+TGG | - | chr8_2:17694262-17694281 | None:intergenic | 35.0% | |
| AAGCACTATGGATAGATTTG+AGG | - | chr8_2:17694354-17694373 | None:intergenic | 35.0% | |
| ! | GAGGGGAGTTGGTTAAAAAT+TGG | - | chr8_2:17689936-17689955 | None:intergenic | 40.0% |
| ATTGAGATGGTGAAGAGAAG+AGG | - | chr8_2:17689998-17690017 | None:intergenic | 40.0% | |
| !! | GTTTGGTTTGGTGTTTAGGA+TGG | - | chr8_2:17690024-17690043 | None:intergenic | 40.0% |
| !! | GTTGGTTTGGTTTGGTGTTT+AGG | - | chr8_2:17690028-17690047 | None:intergenic | 40.0% |
| !!! | TGGTTTTGGTTGGTTTGGTT+TGG | - | chr8_2:17690036-17690055 | None:intergenic | 40.0% |
| !!! | GTTTGTGGTTTTGGTTGGTT+TGG | - | chr8_2:17690041-17690060 | None:intergenic | 40.0% |
| !!! | GTTAGGTTTGTGGTTTTGGT+TGG | - | chr8_2:17690046-17690065 | None:intergenic | 40.0% |
| ! | GGAAGTTAGGTTTGTGGTTT+TGG | - | chr8_2:17690050-17690069 | None:intergenic | 40.0% |
| GAATTGGGAAGTTAGGTTTG+TGG | - | chr8_2:17690056-17690075 | None:intergenic | 40.0% | |
| TTGGAGTGAATTGGGAAGTT+AGG | - | chr8_2:17690063-17690082 | None:intergenic | 40.0% | |
| !!! | GTGGCATTTTGGAGTGAATT+GGG | - | chr8_2:17690071-17690090 | None:intergenic | 40.0% |
| !!! | AGTGGCATTTTGGAGTGAAT+TGG | - | chr8_2:17690072-17690091 | None:intergenic | 40.0% |
| ! | GGTGTGTTTGTAGGATTTTG+AGG | - | chr8_2:17690128-17690147 | None:intergenic | 40.0% |
| !! | TTTTATGGGGGTGTGTTTGT+AGG | - | chr8_2:17690137-17690156 | None:intergenic | 40.0% |
| !!! | GGGAGGTGTTGAACATTTTA+TGG | - | chr8_2:17690152-17690171 | None:intergenic | 40.0% |
| ! | ATGGTTTTTATTGGTGTGGG+GGG | - | chr8_2:17690172-17690191 | None:intergenic | 40.0% |
| ACTCTACAACCACACAAACT+GGG | + | chr8_2:17690264-17690283 | Msa1237970:CDS | 40.0% | |
| AAGTGAAGAAGAGAACAGGA+GGG | - | chr8_2:17690366-17690385 | None:intergenic | 40.0% | |
| GAAAAAACTCCGGCAAGTAA+TGG | - | chr8_2:17690432-17690451 | None:intergenic | 40.0% | |
| !!! | TTGCGTTGCTATTGGTTTTC+AGG | + | chr8_2:17690500-17690519 | Msa1237970:CDS | 40.0% |
| !!! | GTTGCTATTGGTTTTCAGGA+CGG | + | chr8_2:17690504-17690523 | Msa1237970:CDS | 40.0% |
| TTGTTGAAGGGAAGAAAGCT+TGG | + | chr8_2:17690545-17690564 | Msa1237970:CDS | 40.0% | |
| !!! | GGGTGGTTTTGAAGTTAAGA+AGG | + | chr8_2:17690636-17690655 | Msa1237970:CDS | 40.0% |
| TTAGACATGCCTTCAATCTG+AGG | + | chr8_2:17690896-17690915 | Msa1237970:intron | 40.0% | |
| !! | ACTTTAGAGCCTCAGATTGA+AGG | - | chr8_2:17690908-17690927 | None:intergenic | 40.0% |
| GTGTCGTATTGTGTCAGTAT+TGG | + | chr8_2:17691024-17691043 | Msa1237970:intron | 40.0% | |
| TATTGGACACCTACATGTGT+TGG | + | chr8_2:17691041-17691060 | Msa1237970:intron | 40.0% | |
| AACACCGATATGTAGGCAAT+GGG | + | chr8_2:17691109-17691128 | Msa1237970:intron | 40.0% | |
| GTATTAGACATGTCTGACAC+CGG | + | chr8_2:17691178-17691197 | Msa1237970:intron | 40.0% | |
| CGGATACACATGTTCTACAT+AGG | + | chr8_2:17691205-17691224 | Msa1237970:intron | 40.0% | |
| GTGACTGTGATATACTAGGA+TGG | - | chr8_2:17691274-17691293 | None:intergenic | 40.0% | |
| ACAATTCACAACTTACACCC+AGG | - | chr8_2:17691449-17691468 | None:intergenic | 40.0% | |
| GGGTGTAAGTTGTGAATTGT+TGG | + | chr8_2:17691449-17691468 | Msa1237970:intron | 40.0% | |
| !! | TTTGTTCTGGGTTAGCATGT+TGG | + | chr8_2:17691773-17691792 | Msa1237970:intron | 40.0% |
| ! | GTTAGCATGTTGGTTGCTTA+AGG | + | chr8_2:17691783-17691802 | Msa1237970:intron | 40.0% |
| ! | GTTAGGTTTCGATCAAGTTG+TGG | + | chr8_2:17691879-17691898 | Msa1237970:intron | 40.0% |
| GAGGTTGTTAGTGAAACTCA+TGG | + | chr8_2:17691924-17691943 | Msa1237970:intron | 40.0% | |
| ! | GTTCTATGTTTGTTGGGTTC+TGG | + | chr8_2:17692014-17692033 | Msa1237970:intron | 40.0% |
| !!! | TGTTGGGTTCTGGACAATTT+TGG | + | chr8_2:17692024-17692043 | Msa1237970:intron | 40.0% |
| AAAAGGAAGCCCAACAAACA+TGG | - | chr8_2:17692122-17692141 | None:intergenic | 40.0% | |
| ATGCAGTGTCATGTGTTGTA+TGG | + | chr8_2:17692383-17692402 | Msa1237970:intron | 40.0% | |
| GAGCATTCGGCTACTAAAAT+TGG | + | chr8_2:17692511-17692530 | Msa1237970:CDS | 40.0% | |
| CATTCGGCTACTAAAATTGG+AGG | + | chr8_2:17692514-17692533 | Msa1237970:CDS | 40.0% | |
| !! | GGATTCTAGAAGAAGCATCT+TGG | + | chr8_2:17692535-17692554 | Msa1237970:CDS | 40.0% |
| TGATTCCTGTACCGCAAATA+GGG | - | chr8_2:17692742-17692761 | None:intergenic | 40.0% | |
| TTGATTCCTGTACCGCAAAT+AGG | - | chr8_2:17692743-17692762 | None:intergenic | 40.0% | |
| CACATAAGCCAATTCCATCA+TGG | - | chr8_2:17692779-17692798 | None:intergenic | 40.0% | |
| !! | CGGGTATATGATAACGGAAT+TGG | - | chr8_2:17692819-17692838 | None:intergenic | 40.0% |
| GTCAGACGGGTATATGATAA+CGG | - | chr8_2:17692825-17692844 | None:intergenic | 40.0% | |
| AAGAAACCTTGAAGTCAGAC+GGG | - | chr8_2:17692838-17692857 | None:intergenic | 40.0% | |
| CAAGAAACCTTGAAGTCAGA+CGG | - | chr8_2:17692839-17692858 | None:intergenic | 40.0% | |
| ! | TCTAGGATTGAAGTAAGGTG+AGG | - | chr8_2:17692973-17692992 | None:intergenic | 40.0% |
| GGCAGAGTTCAGTTTAGATT+TGG | - | chr8_2:17693889-17693908 | None:intergenic | 40.0% | |
| ! | GTAGGTTGGAGTTCTTATAG+AGG | + | chr8_2:17694002-17694021 | Msa1237970:intron | 40.0% |
| ACTTAATGATCTCTGCCAGA+AGG | + | chr8_2:17694044-17694063 | Msa1237970:CDS | 40.0% | |
| GGCTTCTTGAATGTCTTTCT+GGG | - | chr8_2:17694070-17694089 | None:intergenic | 40.0% | |
| TGGCTTCTTGAATGTCTTTC+TGG | - | chr8_2:17694071-17694090 | None:intergenic | 40.0% | |
| ! | GATCACATTTTCGGTTGCAA+TGG | - | chr8_2:17694091-17694110 | None:intergenic | 40.0% |
| ! | TTGGTGAATGCTCTTTAGAG+TGG | - | chr8_2:17694143-17694162 | None:intergenic | 40.0% |
| TTCTCTTCCATTTAGGAGCT+AGG | - | chr8_2:17694174-17694193 | None:intergenic | 40.0% | |
| ! | AATTGGTTGGTGTGGTTGGT+GGG | - | chr8_2:17689919-17689938 | None:intergenic | 45.0% |
| ! | AAATTGGTTGGTGTGGTTGG+TGG | - | chr8_2:17689920-17689939 | None:intergenic | 45.0% |
| !! | TGTAGGATTTTGAGGAAGGG+AGG | - | chr8_2:17690120-17690139 | None:intergenic | 45.0% |
| ! | GCATTCCTCGTTCTTGGTTT+TGG | - | chr8_2:17690231-17690250 | None:intergenic | 45.0% |
| CACTCTACAACCACACAAAC+TGG | + | chr8_2:17690263-17690282 | Msa1237970:CDS | 45.0% | |
| AGAAAAAGTGACGCACGTGA+CGG | - | chr8_2:17690309-17690328 | None:intergenic | 45.0% | |
| TAAAGAGAGGATGACACGTG+AGG | - | chr8_2:17690341-17690360 | None:intergenic | 45.0% | |
| GAAGTGAAGAAGAGAACAGG+AGG | - | chr8_2:17690367-17690386 | None:intergenic | 45.0% | |
| CGTAGCACAGGAAAAAACTC+CGG | - | chr8_2:17690442-17690461 | None:intergenic | 45.0% | |
| ATGGCTACTGTTGATGTCAG+TGG | + | chr8_2:17690610-17690629 | Msa1237970:CDS | 45.0% | |
| TGGCTACTGTTGATGTCAGT+GGG | + | chr8_2:17690611-17690630 | Msa1237970:CDS | 45.0% | |
| TACTGTTGATGTCAGTGGGA+AGG | + | chr8_2:17690615-17690634 | Msa1237970:CDS | 45.0% | |
| ACTGTTGATGTCAGTGGGAA+GGG | + | chr8_2:17690616-17690635 | Msa1237970:CDS | 45.0% | |
| !! | GTTTGGTGTCCAACACATGT+AGG | - | chr8_2:17691053-17691072 | None:intergenic | 45.0% |
| AGGACACAACACCGATATGT+AGG | + | chr8_2:17691102-17691121 | Msa1237970:intron | 45.0% | |
| CAACACCGATATGTAGGCAA+TGG | + | chr8_2:17691108-17691127 | Msa1237970:intron | 45.0% | |
| ! | GTTTCGATCAAGTTGTGGGT+GGG | + | chr8_2:17691884-17691903 | Msa1237970:intron | 45.0% |
| ! | TTTCGATCAAGTTGTGGGTG+GGG | + | chr8_2:17691885-17691904 | Msa1237970:intron | 45.0% |
| TCTTCTCAACGGTACAGTCA+AGG | + | chr8_2:17692146-17692165 | Msa1237970:intron | 45.0% | |
| ACGAGGAAACCGATCAAACA+CGG | - | chr8_2:17692245-17692264 | None:intergenic | 45.0% | |
| ! | TCTAGAGAAGCATGCATGCA+AGG | + | chr8_2:17692286-17692305 | Msa1237970:intron | 45.0% |
| ACTTCTTGGCCTGATTACCA+AGG | - | chr8_2:17692658-17692677 | None:intergenic | 45.0% | |
| ! | GTAATCAGGCCAAGAAGTGT+TGG | + | chr8_2:17692660-17692679 | Msa1237970:intron | 45.0% |
| CATTTCCCTATTTGCGGTAC+AGG | + | chr8_2:17692734-17692753 | Msa1237970:intron | 45.0% | |
| TGGCTTATGTGAACAGCTTC+TGG | + | chr8_2:17692788-17692807 | Msa1237970:CDS | 45.0% | |
| GGCTTATGTGAACAGCTTCT+GGG | + | chr8_2:17692789-17692808 | Msa1237970:CDS | 45.0% | |
| CATATACCCGTCTGACTTCA+AGG | + | chr8_2:17692829-17692848 | Msa1237970:CDS | 45.0% | |
| TGACGCTCCCTATCATACTT+TGG | + | chr8_2:17692871-17692890 | Msa1237970:CDS | 45.0% | |
| GACGCTCCCTATCATACTTT+GGG | + | chr8_2:17692872-17692891 | Msa1237970:CDS | 45.0% | |
| !! | CAAAGAGGCAGCACTGATAA+AGG | - | chr8_2:17692928-17692947 | None:intergenic | 45.0% |
| AGAATCTGTTATGCTCCCTC+CGG | + | chr8_2:17693023-17693042 | Msa1237970:intron | 45.0% | |
| GCGTTGTAGTTAACAGAACC+AGG | + | chr8_2:17693374-17693393 | Msa1237970:intron | 45.0% | |
| ! | GTGCGCATGGATCACATTTT+CGG | - | chr8_2:17694100-17694119 | None:intergenic | 45.0% |
| GGTAGTTTCGCTTTGCAACA+AGG | - | chr8_2:17694122-17694141 | None:intergenic | 45.0% | |
| !! | AAGAGCATTCACCAAATGGC+TGG | + | chr8_2:17694148-17694167 | Msa1237970:CDS | 45.0% |
| !!! | AATATTAAGTAATTAATTTT+AGG | + | chr8_2:17693202-17693221 | Msa1237970:intron | 5.0% |
| !!! | ATATTAAGTAATTAATTTTA+GGG | + | chr8_2:17693203-17693222 | Msa1237970:intron | 5.0% |
| !! | AGGAGGTGTGAGTGGCATTT+TGG | - | chr8_2:17690082-17690101 | None:intergenic | 50.0% |
| !! | AAGGGAGGAGGGTTAGTTGT+TGG | - | chr8_2:17690105-17690124 | None:intergenic | 50.0% |
| !! | GGATTTTGAGGAAGGGAGGA+GGG | - | chr8_2:17690116-17690135 | None:intergenic | 50.0% |
| !! | AGGATTTTGAGGAAGGGAGG+AGG | - | chr8_2:17690117-17690136 | None:intergenic | 50.0% |
| ! | GTTTTTATTGGTGTGGGGGG+AGG | - | chr8_2:17690169-17690188 | None:intergenic | 50.0% |
| TGTACGGAGGAGGGTGATTA+TGG | - | chr8_2:17690191-17690210 | None:intergenic | 50.0% | |
| GCAGACCAAAACCAAGAACG+AGG | + | chr8_2:17690223-17690242 | Msa1237970:CDS | 50.0% | |
| GAACAGGAGGGACTAAAGAG+AGG | - | chr8_2:17690354-17690373 | None:intergenic | 50.0% | |
| ! | CAAGTAATGGAACCAGACGG+CGG | - | chr8_2:17690419-17690438 | None:intergenic | 50.0% |
| ! | CGGCAAGTAATGGAACCAGA+CGG | - | chr8_2:17690422-17690441 | None:intergenic | 50.0% |
| ! | CGTCTGGTTCCATTACTTGC+CGG | + | chr8_2:17690420-17690439 | Msa1237970:CDS | 50.0% |
| AGTGAAGAAGCTCGTAGCAC+AGG | - | chr8_2:17690454-17690473 | None:intergenic | 50.0% | |
| GCAGGAGCAGTAAGCTGATA+AGG | - | chr8_2:17690478-17690497 | None:intergenic | 50.0% | |
| TCCTGCTCTTGCGTTGCTAT+TGG | + | chr8_2:17690492-17690511 | Msa1237970:CDS | 50.0% | |
| ACCAATAGCAACGCAAGAGC+AGG | - | chr8_2:17690496-17690515 | None:intergenic | 50.0% | |
| !!! | GCTATTGGTTTTCAGGACGG+AGG | + | chr8_2:17690507-17690526 | Msa1237970:CDS | 50.0% |
| !! | CACACATGTCGGTGTTGTGT+TGG | + | chr8_2:17691156-17691175 | Msa1237970:intron | 50.0% |
| TAGACATGTCTGACACCGGA+TGG | + | chr8_2:17691182-17691201 | Msa1237970:intron | 50.0% | |
| GAACATGTGTATCCGCCATC+CGG | - | chr8_2:17691200-17691219 | None:intergenic | 50.0% | |
| CCAGCAACCGTAATGCGATT+GGG | - | chr8_2:17691312-17691331 | None:intergenic | 50.0% | |
| CCAATCGCATTACGGTTGCT+GGG | + | chr8_2:17691310-17691329 | Msa1237970:intron | 50.0% | |
| ! | GGTTTCGATCAAGTTGTGGG+TGG | + | chr8_2:17691883-17691902 | Msa1237970:intron | 50.0% |
| !! | TCAAGTTGTGGGTGGGGTTT+TGG | + | chr8_2:17691891-17691910 | Msa1237970:intron | 50.0% |
| ! | CAAGTTGTGGGTGGGGTTTT+GGG | + | chr8_2:17691892-17691911 | Msa1237970:intron | 50.0% |
| TGCAGTGACGTGTTGTGTCT+AGG | + | chr8_2:17691962-17691981 | Msa1237970:intron | 50.0% | |
| TGACGTGTTGTGTCTAGGCT+TGG | + | chr8_2:17691967-17691986 | Msa1237970:intron | 50.0% | |
| TACAGTCAAGGCTGTCTCCA+AGG | + | chr8_2:17692158-17692177 | Msa1237970:intron | 50.0% | |
| !! | GCAGCACTGATAAAGGTAGC+AGG | - | chr8_2:17692921-17692940 | None:intergenic | 50.0% |
| TTCTGATGGTTGAGTCCGGA+GGG | - | chr8_2:17693041-17693060 | None:intergenic | 50.0% | |
| TTTCTGATGGTTGAGTCCGG+AGG | - | chr8_2:17693042-17693061 | None:intergenic | 50.0% | |
| GAATGTCTTTCTGGGCCTTC+TGG | - | chr8_2:17694062-17694081 | None:intergenic | 50.0% | |
| GGTGAAGAAGAGAGGGGAGT+TGG | - | chr8_2:17689947-17689966 | None:intergenic | 55.0% | |
| ! | GTTGTTGGAGGAGGTGTGAG+TGG | - | chr8_2:17690090-17690109 | None:intergenic | 55.0% |
| !! | GGAGGGTTAGTTGTTGGAGG+AGG | - | chr8_2:17690099-17690118 | None:intergenic | 55.0% |
| !! | GGAGGAGGGTTAGTTGTTGG+AGG | - | chr8_2:17690102-17690121 | None:intergenic | 55.0% |
| ! | GTCTGGGATTGTACGGAGGA+GGG | - | chr8_2:17690200-17690219 | None:intergenic | 55.0% |
| ! | AGTCTGGGATTGTACGGAGG+AGG | - | chr8_2:17690201-17690220 | None:intergenic | 55.0% |
| TCCTCCGTACAATCCCAGAC+TGG | + | chr8_2:17690200-17690219 | Msa1237970:CDS | 55.0% | |
| CCTCCGTACAATCCCAGACT+GGG | + | chr8_2:17690201-17690220 | Msa1237970:CDS | 55.0% | |
| ! | CTGCCCAGTCTGGGATTGTA+CGG | - | chr8_2:17690207-17690226 | None:intergenic | 55.0% |
| !! | GGTTTTGGTCTGCCCAGTCT+GGG | - | chr8_2:17690216-17690235 | None:intergenic | 55.0% |
| !!! | TGGTTTTGGTCTGCCCAGTC+TGG | - | chr8_2:17690217-17690236 | None:intergenic | 55.0% |
| GGTGTGTGACCCAGTTTGTG+TGG | - | chr8_2:17690276-17690295 | None:intergenic | 55.0% | |
| ! | AAAGTGACGCACGTGACGGA+GGG | - | chr8_2:17690305-17690324 | None:intergenic | 55.0% |
| AAAAGTGACGCACGTGACGG+AGG | - | chr8_2:17690306-17690325 | None:intergenic | 55.0% | |
| GTTGATGTCAGTGGGAAGGG+TGG | + | chr8_2:17690619-17690638 | Msa1237970:CDS | 55.0% | |
| ACATGTCTGACACCGGATGG+CGG | + | chr8_2:17691185-17691204 | Msa1237970:intron | 55.0% | |
| CCCAATCGCATTACGGTTGC+TGG | + | chr8_2:17691309-17691328 | Msa1237970:intron | 55.0% | |
| CCCAGCAACCGTAATGCGAT+TGG | - | chr8_2:17691313-17691332 | None:intergenic | 55.0% | |
| !!! | TTGTGGGTGGGGTTTTGGGT+TGG | + | chr8_2:17691896-17691915 | Msa1237970:intron | 55.0% |
| !!! | GGGTTTTGGGTTGGTAGTCG+AGG | + | chr8_2:17691905-17691924 | Msa1237970:intron | 55.0% |
| GCTTTGCAACAAGGTGCGCA+TGG | - | chr8_2:17694113-17694132 | None:intergenic | 55.0% | |
| TAGGAGCTAGGCCAGCCATT+TGG | - | chr8_2:17694162-17694181 | None:intergenic | 55.0% | |
| !! | TGGCTGGCCTAGCTCCTAAA+TGG | + | chr8_2:17694164-17694183 | Msa1237970:exon | 55.0% |
| ! | CCCAGTCTGGGATTGTACGG+AGG | - | chr8_2:17690204-17690223 | None:intergenic | 60.0% |
| GGAGTTGTAGGCGGCGATGA+CGG | - | chr8_2:17690398-17690417 | None:intergenic | 60.0% | |
| GAACCAGACGGCGGAGTTGT+AGG | - | chr8_2:17690410-17690429 | None:intergenic | 60.0% | |
| ! | GCACGTGACGGAGGGAGGAA+CGG | - | chr8_2:17690297-17690316 | None:intergenic | 65.0% |
| ! | GTTGTAGGCGGCGATGACGG+CGG | - | chr8_2:17690395-17690414 | None:intergenic | 65.0% |
| CCAGACGGCGGAGTTGTAGG+CGG | - | chr8_2:17690407-17690426 | None:intergenic | 65.0% | |
| ! | GTGACGCACGTGACGGAGGG+AGG | - | chr8_2:17690302-17690321 | None:intergenic | 70.0% |
| CCGCCTACAACTCCGCCGTC+TGG | + | chr8_2:17690404-17690423 | Msa1237970:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 17689875 | 17694453 | 17689875 | ID=Msa1237970;Name=Msa1237970 |
| chr8_2 | mRNA | 17689875 | 17694453 | 17689875 | ID=Msa1237970-mRNA-1;Parent=Msa1237970;Name=Msa1237970-mRNA-1;_AED=0.06;_eAED=0.06;_QI=141|1|1|1|0.66|0.75|4|271|411 |
| chr8_2 | exon | 17689875 | 17690699 | 17689875 | ID=Msa1237970-mRNA-1:exon:6741;Parent=Msa1237970-mRNA-1 |
| chr8_2 | exon | 17692389 | 17692556 | 17692389 | ID=Msa1237970-mRNA-1:exon:6742;Parent=Msa1237970-mRNA-1 |
| chr8_2 | exon | 17692756 | 17692962 | 17692756 | ID=Msa1237970-mRNA-1:exon:6743;Parent=Msa1237970-mRNA-1 |
| chr8_2 | exon | 17694006 | 17694453 | 17694006 | ID=Msa1237970-mRNA-1:exon:6744;Parent=Msa1237970-mRNA-1 |
| chr8_2 | five_prime_UTR | 17689875 | 17690015 | 17689875 | ID=Msa1237970-mRNA-1:five_prime_utr;Parent=Msa1237970-mRNA-1 |
| chr8_2 | CDS | 17690016 | 17690699 | 17690016 | ID=Msa1237970-mRNA-1:cds;Parent=Msa1237970-mRNA-1 |
| chr8_2 | CDS | 17692389 | 17692556 | 17692389 | ID=Msa1237970-mRNA-1:cds;Parent=Msa1237970-mRNA-1 |
| chr8_2 | CDS | 17692756 | 17692962 | 17692756 | ID=Msa1237970-mRNA-1:cds;Parent=Msa1237970-mRNA-1 |
| chr8_2 | CDS | 17694006 | 17694182 | 17694006 | ID=Msa1237970-mRNA-1:cds;Parent=Msa1237970-mRNA-1 |
| chr8_2 | three_prime_UTR | 17694183 | 17694453 | 17694183 | ID=Msa1237970-mRNA-1:three_prime_utr;Parent=Msa1237970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
