Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1178120 | sp|Q9M2D2|YU88_ARATH | 65.160 | 376 | 123 | 2 | 39 | 407 | 32 | 406 | 4.18e-172 | 490 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1178120 | A0A396GMK3 | 95.631 | 412 | 15 | 2 | 1 | 411 | 1 | 410 | 0.0 | 782 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014410 | Msa1178120 | 0.810346 | 1.206281e-50 | -8.615850e-47 |
| Msa0108070 | Msa1178120 | 0.843369 | 1.461826e-58 | -8.615850e-47 |
| Msa0605250 | Msa1178120 | 0.804347 | 2.256304e-49 | -8.615850e-47 |
| Msa0610780 | Msa1178120 | 0.807620 | 4.623668e-50 | -8.615850e-47 |
| Msa0610810 | Msa1178120 | 0.809757 | 1.615649e-50 | -8.615850e-47 |
| Msa0651310 | Msa1178120 | 0.823197 | 1.576690e-53 | -8.615850e-47 |
| Msa0659300 | Msa1178120 | -0.803573 | 3.267696e-49 | -8.615850e-47 |
| Msa0675010 | Msa1178120 | 0.806216 | 9.161260e-50 | -8.615850e-47 |
| Msa0685890 | Msa1178120 | 0.806425 | 8.277745e-50 | -8.615850e-47 |
| Msa0749150 | Msa1178120 | 0.816887 | 4.385129e-52 | -8.615850e-47 |
| Msa0792880 | Msa1178120 | 0.813132 | 2.987738e-51 | -8.615850e-47 |
| Msa0803530 | Msa1178120 | 0.811585 | 6.504106e-51 | -8.615850e-47 |
| Msa0828900 | Msa1178120 | 0.817996 | 2.468436e-52 | -8.615850e-47 |
| Msa0154240 | Msa1178120 | 0.804917 | 1.715780e-49 | -8.615850e-47 |
| Msa0154270 | Msa1178120 | 0.829099 | 6.220164e-55 | -8.615850e-47 |
| Msa0184510 | Msa1178120 | 0.812125 | 4.961372e-51 | -8.615850e-47 |
| Msa0379340 | Msa1178120 | -0.818594 | 1.807077e-52 | -8.615850e-47 |
| Msa0384530 | Msa1178120 | 0.815939 | 7.147487e-52 | -8.615850e-47 |
| Msa0428850 | Msa1178120 | -0.822147 | 2.767872e-53 | -8.615850e-47 |
| Msa0456760 | Msa1178120 | 0.807626 | 4.610040e-50 | -8.615850e-47 |
| Msa0479030 | Msa1178120 | 0.811466 | 6.901912e-51 | -8.615850e-47 |
| Msa0984000 | Msa1178120 | 0.838903 | 2.180141e-57 | -8.615850e-47 |
| Msa1082150 | Msa1178120 | 0.800029 | 1.745844e-48 | -8.615850e-47 |
| Msa0245870 | Msa1178120 | 0.809888 | 1.514089e-50 | -8.615850e-47 |
| Msa0308570 | Msa1178120 | 0.804171 | 2.455623e-49 | -8.615850e-47 |
| Msa1127910 | Msa1178120 | -0.806331 | 8.664189e-50 | -8.615850e-47 |
| Msa1173380 | Msa1178120 | 0.833448 | 5.301431e-56 | -8.615850e-47 |
| Msa1178120 | Msa1236860 | 0.808103 | 3.651420e-50 | -8.615850e-47 |
| Msa1178120 | Msa1237970 | 0.881903 | 1.629821e-70 | -8.615850e-47 |
| Msa1178120 | Msa1252300 | 0.845284 | 4.471549e-59 | -8.615850e-47 |
| Msa1178120 | Msa1463560 | -0.827744 | 1.320754e-54 | -8.615850e-47 |
| Msa0530340 | Msa1178120 | 0.829654 | 4.560801e-55 | -8.615850e-47 |
| Msa0549540 | Msa1178120 | 0.802268 | 6.080546e-49 | -8.615850e-47 |
| Msa0556070 | Msa1178120 | 0.817352 | 3.448490e-52 | -8.615850e-47 |
| Msa0570680 | Msa1178120 | 0.822271 | 2.589395e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1178120 | MtrunA17_Chr8g0349011 | 95.631 | 412 | 15 | 2 | 1 | 411 | 1 | 410 | 0.0 | 782 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1178120 | AT3G61320.1 | 65.160 | 376 | 123 | 2 | 39 | 407 | 32 | 406 | 4.25e-173 | 490 |
| Msa1178120 | AT3G61320.3 | 65.160 | 376 | 123 | 2 | 39 | 407 | 93 | 467 | 3.82e-172 | 490 |
| Msa1178120 | AT2G45870.1 | 56.867 | 415 | 170 | 5 | 1 | 411 | 1 | 410 | 4.16e-161 | 459 |
| Msa1178120 | AT3G61320.4 | 67.183 | 323 | 98 | 2 | 39 | 354 | 32 | 353 | 9.52e-150 | 429 |
| Msa1178120 | AT2G45870.3 | 58.939 | 358 | 138 | 5 | 1 | 354 | 1 | 353 | 6.35e-141 | 406 |
| Msa1178120 | AT3G61320.2 | 61.660 | 253 | 89 | 2 | 39 | 284 | 93 | 344 | 4.51e-99 | 299 |
| Msa1178120 | AT2G45870.2 | 52.759 | 290 | 128 | 5 | 1 | 286 | 1 | 285 | 5.78e-92 | 280 |
Find 109 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCTTCTTGAATGTCTTTC+TGG | 0.021380 | 8_1:+10761207 | None:intergenic |
| AGTTTATATTTACATGATTA+TGG | 0.170266 | 8_1:+10760855 | None:intergenic |
| GGAAGTTAGGTTTGTGGTTT+TGG | 0.185925 | 8_1:+10765009 | None:intergenic |
| TGGCTTATGTGAACAGCTTC+TGG | 0.202848 | 8_1:-10762252 | Msa1178120:CDS |
| AGCAAAATTCTCTTCCATTT+AGG | 0.207491 | 8_1:+10761097 | None:intergenic |
| GCATTCCTCGTTCTTGGTTT+TGG | 0.221817 | 8_1:+10764828 | None:intergenic |
| AGGAGGTGTGTGTGGCATTT+TGG | 0.234999 | 8_1:+10764977 | None:intergenic |
| TGTACGGAGGAGGGTGATTA+TGG | 0.237196 | 8_1:+10764868 | None:intergenic |
| GTTGGTTTGGTTTGGTGTTT+AGG | 0.264506 | 8_1:+10765031 | None:intergenic |
| GAATGTCTTTCTGGGCCTTC+TGG | 0.274699 | 8_1:+10761216 | None:intergenic |
| GAGCATTCGGCTACTAAAAT+TGG | 0.278019 | 8_1:-10762531 | Msa1178120:CDS |
| CACTCTACAACCACACCAAC+TGG | 0.303400 | 8_1:-10764793 | Msa1178120:CDS |
| AAATCTATCCATAGTGCTTT+AGG | 0.304951 | 8_1:-10760920 | Msa1178120:three_prime_UTR |
| TCCTGCTCTTGCGTTGCTAT+TGG | 0.308883 | 8_1:-10764564 | Msa1178120:CDS |
| TTGGAGTGAATTGGGAAGTT+AGG | 0.325163 | 8_1:+10764996 | None:intergenic |
| TCCTAAAGAAATTGTCAATC+TGG | 0.326102 | 8_1:+10760952 | None:intergenic |
| CATATACTCGTCTGACTTCA+AGG | 0.330649 | 8_1:-10762211 | Msa1178120:CDS |
| TGGCTGGCCTAGCTCCTAAA+TGG | 0.330706 | 8_1:-10761111 | Msa1178120:exon |
| AGGGGAGGAGGGTTAGTTGT+TGG | 0.339455 | 8_1:+10764954 | None:intergenic |
| GGCTTCTTGAATGTCTTTCT+GGG | 0.339634 | 8_1:+10761208 | None:intergenic |
| ACTTGTTTCCATGATGGAAT+TGG | 0.348735 | 8_1:-10762272 | Msa1178120:CDS |
| CAATCATCCCAAAGTATGAT+AGG | 0.352692 | 8_1:+10762161 | None:intergenic |
| CAAAGAGGCAGCACTAATAA+AGG | 0.355218 | 8_1:+10762115 | None:intergenic |
| GGAGGAGGGTTAGTTGTTGG+AGG | 0.360905 | 8_1:+10764957 | None:intergenic |
| TACTTTGGGATGATTGTCAT+TGG | 0.371618 | 8_1:-10762154 | Msa1178120:CDS |
| ACCAGATTGACAATTTCTTT+AGG | 0.379257 | 8_1:-10760953 | Msa1178120:three_prime_UTR |
| GAGAGTGTTGAGAATAATTA+TGG | 0.383976 | 8_1:+10765091 | None:intergenic |
| GGAGGGTTAGTTGTTGGAGG+AGG | 0.392317 | 8_1:+10764960 | None:intergenic |
| CTTCAAGGTTTCTTGTCCTA+TGG | 0.395817 | 8_1:-10762196 | Msa1178120:CDS |
| CGTCTGGTTCCATTACTTGC+CGG | 0.396905 | 8_1:-10764636 | Msa1178120:CDS |
| GACGCTCCCTATCATACTTT+GGG | 0.402973 | 8_1:-10762168 | Msa1178120:CDS |
| TTGGTTGGTGTGTGGTGGGT+GGG | 0.406617 | 8_1:+10765141 | None:intergenic |
| AACAATACCTTAAGAACAAT+AGG | 0.408673 | 8_1:+10764371 | None:intergenic |
| TGACGCTCCCTATCATACTT+TGG | 0.409664 | 8_1:-10762169 | Msa1178120:CDS |
| ATTGGTTGGTGTGTGGTGGG+TGG | 0.416466 | 8_1:+10765140 | None:intergenic |
| AATATACTCCTAAAGCACTA+TGG | 0.425954 | 8_1:+10760912 | None:intergenic |
| GGCTTATGTGAACAGCTTCT+GGG | 0.429998 | 8_1:-10762251 | Msa1178120:CDS |
| AGTTTATATCGCAGAGCATT+CGG | 0.432821 | 8_1:-10762544 | Msa1178120:CDS |
| GCAGGAGCAGTAAGCTGATA+AGG | 0.432959 | 8_1:+10764581 | None:intergenic |
| AAAGAAGTGAAGAAGAGAAC+AGG | 0.435786 | 8_1:+10764689 | None:intergenic |
| AAAGAGAAACTACCACTCTA+AGG | 0.438983 | 8_1:-10761147 | Msa1178120:CDS |
| AAAATCACTTGTTTCCATGA+TGG | 0.446251 | 8_1:-10762278 | Msa1178120:CDS |
| TTAAGTGCAAGCATTGGAAA+TGG | 0.446400 | 8_1:+10761248 | None:intergenic |
| AAAATTGGTTGGTGTGTGGT+GGG | 0.453391 | 8_1:+10765137 | None:intergenic |
| TAGCCACATTAATTGTGGTT+AGG | 0.453740 | 8_1:-10761019 | Msa1178120:three_prime_UTR |
| GTTTGGTTTGGTGTTTAGGA+TGG | 0.457366 | 8_1:+10765035 | None:intergenic |
| TTCTCTTCCATTTAGGAGCT+AGG | 0.463417 | 8_1:+10761104 | None:intergenic |
| CCGCTTACAACTCCGCCGTC+TGG | 0.465961 | 8_1:-10764652 | Msa1178120:CDS |
| AGCGAAGAAGCTCGTAGCAC+AGG | 0.467896 | 8_1:+10764605 | None:intergenic |
| GAATTGGGAAGTTAGGTTTG+TGG | 0.478696 | 8_1:+10765003 | None:intergenic |
| ACTGTTGATGTCAGTGGGAA+GGG | 0.479910 | 8_1:-10764440 | Msa1178120:CDS |
| ATGCAGTGTCATGTGTTGTA+TGG | 0.487229 | 8_1:-10762659 | Msa1178120:intron |
| TCCTCCGTACAATCCCAGAC+TGG | 0.489039 | 8_1:-10764856 | Msa1178120:CDS |
| ACCAATAGCAACGCAAGAGC+AGG | 0.492418 | 8_1:+10764563 | None:intergenic |
| TTGTTGAAGGGAAGAAAGCT+TGG | 0.502301 | 8_1:-10764511 | Msa1178120:CDS |
| TCTAAGGAGCATTCACCAAA+TGG | 0.503162 | 8_1:-10761131 | Msa1178120:CDS |
| TAATTATGGTGAAGAAGAGA+AGG | 0.509596 | 8_1:+10765105 | None:intergenic |
| CATTCGGCTACTAAAATTGG+AGG | 0.521365 | 8_1:-10762528 | Msa1178120:CDS |
| CTGCCCAGTCTGGGATTGTA+CGG | 0.524923 | 8_1:+10764852 | None:intergenic |
| AAGCACTATGGATAGATTTG+AGG | 0.528579 | 8_1:+10760924 | None:intergenic |
| TTGTATAGCCACATTAATTG+TGG | 0.530594 | 8_1:-10761024 | Msa1178120:three_prime_UTR |
| AGTCTGGGATTGTACGGAGG+AGG | 0.530882 | 8_1:+10764858 | None:intergenic |
| TACTGTTGATGTCAGTGGGA+AGG | 0.531531 | 8_1:-10764441 | Msa1178120:CDS |
| CGAGTATATGATAACGGAAT+CGG | 0.531902 | 8_1:+10762224 | None:intergenic |
| CTTATTCGAGATTTGTTGAA+GGG | 0.533050 | 8_1:-10764523 | Msa1178120:CDS |
| GGATTCTAGAAGAAGCATCT+TGG | 0.535842 | 8_1:-10762507 | Msa1178120:intron |
| GTAGGTTGGAGTTCTTATAG+AGG | 0.537255 | 8_1:-10761273 | Msa1178120:intron |
| TCTTATTCGAGATTTGTTGA+AGG | 0.538582 | 8_1:-10764524 | Msa1178120:CDS |
| GCACGTGACGGAGGGAGGAA+CGG | 0.547211 | 8_1:+10764762 | None:intergenic |
| ATTGAGATGGTGAAGAGAAG+AGG | 0.548250 | 8_1:+10765061 | None:intergenic |
| AGGAGCATTCACCAAATGGC+TGG | 0.548531 | 8_1:-10761127 | Msa1178120:CDS |
| TGGTGAAGAAGAGAAGGAGT+TGG | 0.548577 | 8_1:+10765111 | None:intergenic |
| AGTATATTCTGCTAATGTAG+TGG | 0.549596 | 8_1:-10760897 | Msa1178120:three_prime_UTR |
| GTTGTTGGAGGAGGTGTGTG+TGG | 0.549919 | 8_1:+10764969 | None:intergenic |
| GCAGCACTAATAAAGGTAGC+AGG | 0.552305 | 8_1:+10762122 | None:intergenic |
| GTCAGACGAGTATATGATAA+CGG | 0.553489 | 8_1:+10762218 | None:intergenic |
| GGTAGTTTCTCTTTGCAACA+AGG | 0.553972 | 8_1:+10761156 | None:intergenic |
| CACATAAGCCAATTCCATCA+TGG | 0.557282 | 8_1:+10762264 | None:intergenic |
| AAAGTGACGCACGTGACGGA+GGG | 0.559488 | 8_1:+10764754 | None:intergenic |
| GTATATTCTGCTAATGTAGT+GGG | 0.565506 | 8_1:-10760896 | Msa1178120:three_prime_UTR |
| AATCTTAAATTAAAAGAACC+TGG | 0.565648 | 8_1:+10765177 | None:intergenic |
| GAAGTGAAGAAGAGAACAGG+AGG | 0.569132 | 8_1:+10764692 | None:intergenic |
| AGATCATTAAGTGCAAGCAT+TGG | 0.571323 | 8_1:+10761242 | None:intergenic |
| TTTAGGATGGTACATTGAGA+TGG | 0.571874 | 8_1:+10765048 | None:intergenic |
| AATCATCCCAAAGTATGATA+GGG | 0.572755 | 8_1:+10762162 | None:intergenic |
| TGGCTACTGTTGATGTCAGT+GGG | 0.573291 | 8_1:-10764445 | Msa1178120:CDS |
| TTGGTGAATGCTCCTTAGAG+TGG | 0.590410 | 8_1:+10761135 | None:intergenic |
| GTCTGGGATTGTACGGAGGA+GGG | 0.608407 | 8_1:+10764859 | None:intergenic |
| GTGACGCACGTGACGGAGGG+AGG | 0.608794 | 8_1:+10764757 | None:intergenic |
| AAAAGTGACGCACGTGACGG+AGG | 0.611743 | 8_1:+10764753 | None:intergenic |
| ATGGCTACTGTTGATGTCAG+TGG | 0.612427 | 8_1:-10764446 | Msa1178120:CDS |
| ACTTAATGATCTCTGCCAGA+AGG | 0.623032 | 8_1:-10761231 | Msa1178120:CDS |
| GTTCCTAACCACAATTAATG+TGG | 0.626611 | 8_1:+10761016 | None:intergenic |
| ACTCTACAACCACACCAACT+GGG | 0.628788 | 8_1:-10764792 | Msa1178120:CDS |
| TAGGGAGCGTCAGATGCCAT+AGG | 0.631394 | 8_1:+10762180 | None:intergenic |
| GTTGATGTCAGTGGGAAGGG+TGG | 0.633881 | 8_1:-10764437 | Msa1178120:CDS |
| TTCTTCAATGCAGAACAAAG+AGG | 0.637682 | 8_1:+10762100 | None:intergenic |
| GAACAGGAGGGACTAAAGAG+AGG | 0.649071 | 8_1:+10764705 | None:intergenic |
| GGTGTGTGACCCAGTTGGTG+TGG | 0.653780 | 8_1:+10764783 | None:intergenic |
| GTTGTAAGCGGCGATGACAG+CGG | 0.654951 | 8_1:+10764664 | None:intergenic |
| CCAGACGGCGGAGTTGTAAG+CGG | 0.658004 | 8_1:+10764652 | None:intergenic |
| CCCAGTCTGGGATTGTACGG+AGG | 0.658078 | 8_1:+10764855 | None:intergenic |
| AAGTGAAGAAGAGAACAGGA+GGG | 0.692777 | 8_1:+10764693 | None:intergenic |
| TAAAGAGAGGATGACACGCG+AGG | 0.698885 | 8_1:+10764718 | None:intergenic |
| CAAGTAATGGAACCAGACGG+CGG | 0.715460 | 8_1:+10764640 | None:intergenic |
| CGGCAAGTAATGGAACCAGA+CGG | 0.716242 | 8_1:+10764637 | None:intergenic |
| GGAACGGTGTGTGACCCAGT+TGG | 0.725553 | 8_1:+10764778 | None:intergenic |
| GCAGACCAAAACCAAGAACG+AGG | 0.744295 | 8_1:-10764833 | Msa1178120:CDS |
| ATAAACTCAATAATGCAGCG+AGG | 0.783535 | 8_1:+10762560 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAAAAATCAATTTTTTTTA+TGG | + | chr8_1:10762807-10762826 | None:intergenic | 10.0% |
| !! | AAGAAAAAAAAGAAAAAAAA+GGG | + | chr8_1:10763107-10763126 | None:intergenic | 10.0% |
| !! | AAAGAAAAAAAAGAAAAAAA+AGG | + | chr8_1:10763108-10763127 | None:intergenic | 10.0% |
| !!! | AATAGGTTAAAAAATATTTT+TGG | - | chr8_1:10764242-10764261 | Msa1178120:intron | 10.0% |
| !!! | TTTAAAATGATATATTTGTA+GGG | + | chr8_1:10764269-10764288 | None:intergenic | 10.0% |
| !!! | TTTTAAAATGATATATTTGT+AGG | + | chr8_1:10764270-10764289 | None:intergenic | 10.0% |
| !!! | ATAATCCATGTTTTAATTTA+TGG | - | chr8_1:10762210-10762229 | Msa1178120:CDS | 15.0% |
| !!! | TTTTTTTAGTTGTAATTGAT+GGG | - | chr8_1:10763324-10763343 | Msa1178120:intron | 15.0% |
| !!! | TTTAACCTATTTTATATGTA+AGG | + | chr8_1:10764233-10764252 | None:intergenic | 15.0% |
| !! | AGTTTATATTTACATGATTA+TGG | + | chr8_1:10765180-10765199 | None:intergenic | 15.0% |
| !! | AATCTTAAATTAAAAGAACC+TGG | + | chr8_1:10760858-10760877 | None:intergenic | 20.0% |
| !!! | TCATAGATATTTTTTGTCAA+AGG | - | chr8_1:10761727-10761746 | Msa1178120:intron | 20.0% |
| !! | TTATAACATACTATTGTGTT+TGG | + | chr8_1:10762050-10762069 | None:intergenic | 20.0% |
| !!! | ATTCCATTTATTTTATTTCG+AGG | - | chr8_1:10762576-10762595 | Msa1178120:CDS | 20.0% |
| !!! | TTGATTTTTGTATGCTAATT+TGG | - | chr8_1:10762816-10762835 | Msa1178120:intron | 20.0% |
| !! | AAATAAGTTCTATGTTTGTT+GGG | - | chr8_1:10762977-10762996 | Msa1178120:intron | 20.0% |
| !! | AAAAAACTCAAAAAAAACCT+GGG | + | chr8_1:10763156-10763175 | None:intergenic | 20.0% |
| !! | AAAAAAACTCAAAAAAAACC+TGG | + | chr8_1:10763157-10763176 | None:intergenic | 20.0% |
| !!! | AGGTTTTTTTTGAGTTTTTT+TGG | - | chr8_1:10763156-10763175 | Msa1178120:intron | 20.0% |
| !!! | GGTTTTTTTTGAGTTTTTTT+GGG | - | chr8_1:10763157-10763176 | Msa1178120:intron | 20.0% |
| !!! | CTTTTTTTAGTTGTAATTGA+TGG | - | chr8_1:10763323-10763342 | Msa1178120:intron | 20.0% |
| !! | CAAAACTACATAATGAATTT+AGG | - | chr8_1:10763573-10763592 | Msa1178120:intron | 20.0% |
| !!! | AACACATAAATTTACGTTTT+TGG | + | chr8_1:10763628-10763647 | None:intergenic | 20.0% |
| !! | TTGATATATTGAAATAGTCT+AGG | + | chr8_1:10763982-10764001 | None:intergenic | 20.0% |
| !!! | ACTTAAAATTTTTCACCTAA+TGG | + | chr8_1:10764104-10764123 | None:intergenic | 20.0% |
| !! | AAATGTTGTACATATTACAT+GGG | - | chr8_1:10764453-10764472 | Msa1178120:CDS | 20.0% |
| !! | CAACATTAACAAATATTTCA+GGG | - | chr8_1:10764483-10764502 | Msa1178120:CDS | 20.0% |
| !! | AAATATAACACTTATTCTTC+TGG | + | chr8_1:10764521-10764540 | None:intergenic | 20.0% |
| !! | GAATAAGTGTTATATTTACA+AGG | - | chr8_1:10764524-10764543 | Msa1178120:CDS | 20.0% |
| !! | TTTCACTGATAAAATAGATT+TGG | - | chr8_1:10764617-10764636 | Msa1178120:CDS | 20.0% |
| !! | ATACATAAGTAATTGATTGA+TGG | - | chr8_1:10764668-10764687 | Msa1178120:CDS | 20.0% |
| !! | ATTATGGTTTTTATTGGTGT+GGG | + | chr8_1:10761151-10761170 | None:intergenic | 25.0% |
| ! | AACAATACCTTAAGAACAAT+AGG | + | chr8_1:10761664-10761683 | None:intergenic | 25.0% |
| ! | ACTTACAACTAATGTAATAC+TGG | + | chr8_1:10761826-10761845 | None:intergenic | 25.0% |
| !!! | CGCTTATGTTTTATTATTAC+AGG | + | chr8_1:10761956-10761975 | None:intergenic | 25.0% |
| ! | TTGAATGTAAACACATAAGT+TGG | - | chr8_1:10761982-10762001 | Msa1178120:intron | 25.0% |
| ! | CAATAGTATGTTATAAGCTA+TGG | - | chr8_1:10762054-10762073 | Msa1178120:intron | 25.0% |
| ! | AGCAACCATAAATTAAAACA+TGG | + | chr8_1:10762218-10762237 | None:intergenic | 25.0% |
| ! | TATAAAAGACTTAGATTTCG+TGG | - | chr8_1:10762314-10762333 | Msa1178120:intron | 25.0% |
| ! | TGTGAATTGTTAGTTATTTG+AGG | - | chr8_1:10762439-10762458 | Msa1178120:intron | 25.0% |
| !! | TATCTGGTATTCTTCAATTT+TGG | - | chr8_1:10762472-10762491 | Msa1178120:intron | 25.0% |
| !! | ATAGAGTGTTTAAATTGTTG+AGG | - | chr8_1:10762506-10762525 | Msa1178120:intron | 25.0% |
| !! | TAGAGTGTTTAAATTGTTGA+GGG | - | chr8_1:10762507-10762526 | Msa1178120:intron | 25.0% |
| ! | CTAAGTACAAGATAATTCAA+TGG | - | chr8_1:10762545-10762564 | Msa1178120:CDS | 25.0% |
| ! | CATCCTCGAAATAAAATAAA+TGG | + | chr8_1:10762582-10762601 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTCCTCTTCAAAG+TGG | - | chr8_1:10762625-10762644 | Msa1178120:CDS | 25.0% |
| !!! | TTTTTTTTCCTCTTCAAAGT+GGG | - | chr8_1:10762626-10762645 | Msa1178120:CDS | 25.0% |
| !!! | TGTTGAAATTGTTTTGTTCT+GGG | - | chr8_1:10762731-10762750 | Msa1178120:intron | 25.0% |
| ! | TTAAGGTAAGAATTGTTTGA+TGG | - | chr8_1:10762770-10762789 | Msa1178120:intron | 25.0% |
| !! | TTTTTGTATGCTAATTTGGA+AGG | - | chr8_1:10762820-10762839 | Msa1178120:intron | 25.0% |
| ! | CAAATAAGTTCTATGTTTGT+TGG | - | chr8_1:10762976-10762995 | Msa1178120:intron | 25.0% |
| !!! | TTTTTTGAGTTTTTTTGGGT+TGG | - | chr8_1:10763161-10763180 | Msa1178120:intron | 25.0% |
| ! | CTGCATTCAAATTATTCAAA+TGG | + | chr8_1:10763359-10763378 | None:intergenic | 25.0% |
| !! | TTCAAACATTTTCCTAATTG+TGG | - | chr8_1:10763720-10763739 | Msa1178120:intron | 25.0% |
| !! | AATAGTCTAGGATTTAAGTA+AGG | + | chr8_1:10763970-10763989 | None:intergenic | 25.0% |
| ! | TTGTAATAACCTAAAGTTCT+TGG | + | chr8_1:10764048-10764067 | None:intergenic | 25.0% |
| ! | TTTATTCTGCATTATCCATT+AGG | - | chr8_1:10764086-10764105 | Msa1178120:intron | 25.0% |
| ! | ACAAACAAATGTTGAAAGAT+AGG | - | chr8_1:10764126-10764145 | Msa1178120:intron | 25.0% |
| ! | TCTGTCCTTACATATAAAAT+AGG | - | chr8_1:10764225-10764244 | Msa1178120:intron | 25.0% |
| ! | TAAAACAAAACAAGGACTAA+AGG | + | chr8_1:10764335-10764354 | None:intergenic | 25.0% |
| ! | CAAATGTTGTACATATTACA+TGG | - | chr8_1:10764452-10764471 | Msa1178120:CDS | 25.0% |
| !! | CCTGAAATATTTGTTAATGT+TGG | + | chr8_1:10764485-10764504 | None:intergenic | 25.0% |
| ! | CCAACATTAACAAATATTTC+AGG | - | chr8_1:10764482-10764501 | Msa1178120:CDS | 25.0% |
| !! | GTATTGTTTGAGTTTAGATT+TGG | + | chr8_1:10764652-10764671 | None:intergenic | 25.0% |
| ! | ATGTGAAAAATGATTGATGT+AGG | - | chr8_1:10764741-10764760 | Msa1178120:CDS | 25.0% |
| ! | AGAAGGAGTTGGTTAAAAAT+TGG | + | chr8_1:10760913-10760932 | None:intergenic | 30.0% |
| TAATTATGGTGAAGAAGAGA+AGG | + | chr8_1:10760930-10760949 | None:intergenic | 30.0% | |
| !! | GAGAGTGTTGAGAATAATTA+TGG | + | chr8_1:10760944-10760963 | None:intergenic | 30.0% |
| ! | TTATGGTTTTTATTGGTGTG+GGG | + | chr8_1:10761150-10761169 | None:intergenic | 30.0% |
| ! | GATTATGGTTTTTATTGGTG+TGG | + | chr8_1:10761152-10761171 | None:intergenic | 30.0% |
| ! | AGGGTGATTATGGTTTTTAT+TGG | + | chr8_1:10761157-10761176 | None:intergenic | 30.0% |
| !! | TCTTATTCGAGATTTGTTGA+AGG | - | chr8_1:10761508-10761527 | Msa1178120:intron | 30.0% |
| !! | CTTATTCGAGATTTGTTGAA+GGG | - | chr8_1:10761509-10761528 | Msa1178120:intron | 30.0% |
| !!! | TGATTTTGCTAGACTTGTTA+TGG | - | chr8_1:10761567-10761586 | Msa1178120:intron | 30.0% |
| ! | TGCTTTTCCTATTGTTCTTA+AGG | - | chr8_1:10761654-10761673 | Msa1178120:intron | 30.0% |
| AGTCTATAGTTACAGCAATT+TGG | + | chr8_1:10762341-10762360 | None:intergenic | 30.0% | |
| TTGAGGTCAAAATAGTTATC+TGG | - | chr8_1:10762456-10762475 | Msa1178120:intron | 30.0% | |
| AGTACAAGATAATTCAATGG+TGG | - | chr8_1:10762548-10762567 | Msa1178120:CDS | 30.0% | |
| ! | TATTTCGAGGATGATTTTGA+AGG | - | chr8_1:10762589-10762608 | Msa1178120:CDS | 30.0% |
| ! | ATTTCGAGGATGATTTTGAA+GGG | - | chr8_1:10762590-10762609 | Msa1178120:CDS | 30.0% |
| !! | GTGTTGAAATTGTTTTGTTC+TGG | - | chr8_1:10762730-10762749 | Msa1178120:intron | 30.0% |
| ! | AAGAATTGTTTGATGGTTGT+TGG | - | chr8_1:10762777-10762796 | Msa1178120:intron | 30.0% |
| !! | TAATTTGGAAGGTGTTTGTT+AGG | - | chr8_1:10762831-10762850 | Msa1178120:intron | 30.0% |
| TGGAACTATTCTGAACAAAA+TGG | + | chr8_1:10763213-10763232 | None:intergenic | 30.0% | |
| AGAATAGTTCCATGTTTGAT+CGG | - | chr8_1:10763221-10763240 | Msa1178120:intron | 30.0% | |
| CGTAAATTTATGTGTTTCCT+TGG | - | chr8_1:10763632-10763651 | Msa1178120:intron | 30.0% | |
| ! | TATGTGTTTCCTTGGTAATT+AGG | - | chr8_1:10763640-10763659 | Msa1178120:intron | 30.0% |
| AAAATCACTTGTTTCCATGA+TGG | - | chr8_1:10763754-10763773 | Msa1178120:intron | 30.0% | |
| AATCATCCCAAAGTATGATA+GGG | + | chr8_1:10763873-10763892 | None:intergenic | 30.0% | |
| TTAACTGAACCAAGAACTTT+AGG | - | chr8_1:10764036-10764055 | Msa1178120:intron | 30.0% | |
| ACAGAGACTAAAACAAAACA+AGG | + | chr8_1:10764343-10764362 | None:intergenic | 30.0% | |
| TCTGTAAAATTTGACGATGT+TGG | - | chr8_1:10764358-10764377 | Msa1178120:intron | 30.0% | |
| AAATTTGACGATGTTGGAAT+TGG | - | chr8_1:10764364-10764383 | Msa1178120:intron | 30.0% | |
| GAGTATTACACACATATTGT+AGG | + | chr8_1:10764392-10764411 | None:intergenic | 30.0% | |
| !! | ATGAAAGAGCTGTGTTATTT+AGG | - | chr8_1:10764568-10764587 | Msa1178120:CDS | 30.0% |
| !! | TGAAAGAGCTGTGTTATTTA+GGG | - | chr8_1:10764569-10764588 | Msa1178120:CDS | 30.0% |
| TAAAATGCAACTCTGATTTC+TGG | - | chr8_1:10764696-10764715 | Msa1178120:CDS | 30.0% | |
| GAAAAATGATTGATGTAGGT+TGG | - | chr8_1:10764745-10764764 | Msa1178120:CDS | 30.0% | |
| ! | AATCACATTTTCGGTTGTAA+TGG | + | chr8_1:10764848-10764867 | None:intergenic | 30.0% |
| AGCAAAATTCTCTTCCATTT+AGG | + | chr8_1:10764938-10764957 | None:intergenic | 30.0% | |
| ! | AATGGAAGAGAATTTTGCTT+TGG | - | chr8_1:10764939-10764958 | Msa1178120:CDS | 30.0% |
| ! | TTCTTCAACTTTTGCTTATG+AGG | - | chr8_1:10764967-10764986 | Msa1178120:CDS | 30.0% |
| TTGTATAGCCACATTAATTG+TGG | - | chr8_1:10765008-10765027 | Msa1178120:CDS | 30.0% | |
| ACCAGATTGACAATTTCTTT+AGG | - | chr8_1:10765079-10765098 | Msa1178120:five_prime_UTR | 30.0% | |
| TCCTAAAGAAATTGTCAATC+TGG | + | chr8_1:10765083-10765102 | None:intergenic | 30.0% | |
| AAATCTATCCATAGTGCTTT+AGG | - | chr8_1:10765112-10765131 | Msa1178120:five_prime_UTR | 30.0% | |
| ! | AATATACTCCTAAAGCACTA+TGG | + | chr8_1:10765123-10765142 | None:intergenic | 30.0% |
| AGTATATTCTGCTAATGTAG+TGG | - | chr8_1:10765135-10765154 | Msa1178120:five_prime_UTR | 30.0% | |
| GTATATTCTGCTAATGTAGT+GGG | - | chr8_1:10765136-10765155 | Msa1178120:five_prime_UTR | 30.0% | |
| ! | GTTAAAAATTGGTTGGTGTG+TGG | + | chr8_1:10760902-10760921 | None:intergenic | 35.0% |
| ! | GGAGTTGGTTAAAAATTGGT+TGG | + | chr8_1:10760909-10760928 | None:intergenic | 35.0% |
| ! | TTTAGGATGGTACATTGAGA+TGG | + | chr8_1:10760987-10761006 | None:intergenic | 35.0% |
| !! | TGTTTGTAGGATTTTGAGGA+GGG | + | chr8_1:10761100-10761119 | None:intergenic | 35.0% |
| ! | TATGGTTTTTATTGGTGTGG+GGG | + | chr8_1:10761149-10761168 | None:intergenic | 35.0% |
| !!! | TTTTTTGCATTCCTCGTTCT+TGG | + | chr8_1:10761213-10761232 | None:intergenic | 35.0% |
| AAAGAAGTGAAGAAGAGAAC+AGG | + | chr8_1:10761346-10761365 | None:intergenic | 35.0% | |
| CTATGTCTTAGTGTTATGTC+TGG | + | chr8_1:10761800-10761819 | None:intergenic | 35.0% | |
| !!! | AATCTGAGGCTCTAAAGTTT+TGG | - | chr8_1:10761885-10761904 | Msa1178120:intron | 35.0% |
| !!! | GGCTCTAAAGTTTTGGTATA+AGG | - | chr8_1:10761892-10761911 | Msa1178120:intron | 35.0% |
| TATTGGACACTTACATGTGT+TGG | - | chr8_1:10762021-10762040 | Msa1178120:intron | 35.0% | |
| TGTTATAAGCTATGGAACAC+AGG | - | chr8_1:10762062-10762081 | Msa1178120:intron | 35.0% | |
| ! | TTTTCCCATTGCCTACATAT+CGG | + | chr8_1:10762096-10762115 | None:intergenic | 35.0% |
| ATATGTAGGCAATGGGAAAA+TGG | - | chr8_1:10762096-10762115 | Msa1178120:intron | 35.0% | |
| TATGTAGGCAATGGGAAAAT+GGG | - | chr8_1:10762097-10762116 | Msa1178120:intron | 35.0% | |
| TCAAGTGAAATCACACATGT+CGG | - | chr8_1:10762125-10762144 | Msa1178120:CDS | 35.0% | |
| GATTGGGATTAAGTTCACAA+AGG | + | chr8_1:10762276-10762295 | None:intergenic | 35.0% | |
| ACCAAGAAGTTAATTCAACC+TGG | - | chr8_1:10762408-10762427 | Msa1178120:intron | 35.0% | |
| CCAAGAAGTTAATTCAACCT+GGG | - | chr8_1:10762409-10762428 | Msa1178120:intron | 35.0% | |
| GTGTTTAAATTGTTGAGGGT+TGG | - | chr8_1:10762511-10762530 | Msa1178120:CDS | 35.0% | |
| !! | CAGACTAGTTCTATGTTTGT+TGG | - | chr8_1:10762677-10762696 | Msa1178120:intron | 35.0% |
| ! | TTAGGTTTCGATCAAGTTGT+GGG | - | chr8_1:10762849-10762868 | Msa1178120:intron | 35.0% |
| AGCTAAGTTCCATGTTTGTT+GGG | - | chr8_1:10763078-10763097 | Msa1178120:intron | 35.0% | |
| CTTTCTCAATGATACAGTCA+AGG | - | chr8_1:10763124-10763143 | Msa1178120:intron | 35.0% | |
| !! | GGTTGGTAATTGTTGTTGAT+GGG | - | chr8_1:10763178-10763197 | Msa1178120:intron | 35.0% |
| GAATAGTTCCATGTTTGATC+GGG | - | chr8_1:10763222-10763241 | Msa1178120:intron | 35.0% | |
| !! | TCTCTAGAGTCTACATCATT+GGG | + | chr8_1:10763264-10763283 | None:intergenic | 35.0% |
| !! | TTCTCTAGAGTCTACATCAT+TGG | + | chr8_1:10763265-10763284 | None:intergenic | 35.0% |
| ATAAACTCAATAATGCAGCG+AGG | + | chr8_1:10763475-10763494 | None:intergenic | 35.0% | |
| ! | AGTTTATATCGCAGAGCATT+CGG | - | chr8_1:10763488-10763507 | Msa1178120:intron | 35.0% |
| ! | CATTTTCCTAATTGTGGTAC+AGG | - | chr8_1:10763726-10763745 | Msa1178120:intron | 35.0% |
| TTGATTCCTGTACCACAATT+AGG | + | chr8_1:10763735-10763754 | None:intergenic | 35.0% | |
| ! | ACTTGTTTCCATGATGGAAT+TGG | - | chr8_1:10763760-10763779 | Msa1178120:intron | 35.0% |
| !! | CGAGTATATGATAACGGAAT+CGG | + | chr8_1:10763811-10763830 | None:intergenic | 35.0% |
| GTCAGACGAGTATATGATAA+CGG | + | chr8_1:10763817-10763836 | None:intergenic | 35.0% | |
| CAATCATCCCAAAGTATGAT+AGG | + | chr8_1:10763874-10763893 | None:intergenic | 35.0% | |
| !! | TACTTTGGGATGATTGTCAT+TGG | - | chr8_1:10763878-10763897 | Msa1178120:intron | 35.0% |
| TTCTTCAATGCAGAACAAAG+AGG | + | chr8_1:10763935-10763954 | None:intergenic | 35.0% | |
| ! | TCTAGGATTTAAGTAAGGTG+AGG | + | chr8_1:10763965-10763984 | None:intergenic | 35.0% |
| GGTGGAATGTTTAAATCATC+TGG | - | chr8_1:10764186-10764205 | Msa1178120:intron | 35.0% | |
| TCTTAAACATGCGCTACATA+AGG | + | chr8_1:10764423-10764442 | None:intergenic | 35.0% | |
| TAGGGAATCAGAACAAACTA+TGG | - | chr8_1:10764587-10764606 | Msa1178120:CDS | 35.0% | |
| !! | TTAAGTGCAAGCATTGGAAA+TGG | + | chr8_1:10764787-10764806 | None:intergenic | 35.0% |
| AGATCATTAAGTGCAAGCAT+TGG | + | chr8_1:10764793-10764812 | None:intergenic | 35.0% | |
| AAAGAGAAACTACCACTCTA+AGG | - | chr8_1:10764885-10764904 | Msa1178120:CDS | 35.0% | |
| ! | TTCAACTTTTGCTTATGAGG+TGG | - | chr8_1:10764970-10764989 | Msa1178120:CDS | 35.0% |
| TAGCCACATTAATTGTGGTT+AGG | - | chr8_1:10765013-10765032 | Msa1178120:CDS | 35.0% | |
| GTTCCTAACCACAATTAATG+TGG | + | chr8_1:10765019-10765038 | None:intergenic | 35.0% | |
| AAGCACTATGGATAGATTTG+AGG | + | chr8_1:10765111-10765130 | None:intergenic | 35.0% | |
| ! | AAAATTGGTTGGTGTGTGGT+GGG | + | chr8_1:10760898-10760917 | None:intergenic | 40.0% |
| ! | AAAAATTGGTTGGTGTGTGG+TGG | + | chr8_1:10760899-10760918 | None:intergenic | 40.0% |
| ATTGAGATGGTGAAGAGAAG+AGG | + | chr8_1:10760974-10760993 | None:intergenic | 40.0% | |
| !! | GTTTGGTTTGGTGTTTAGGA+TGG | + | chr8_1:10761000-10761019 | None:intergenic | 40.0% |
| !! | GTTGGTTTGGTTTGGTGTTT+AGG | + | chr8_1:10761004-10761023 | None:intergenic | 40.0% |
| !!! | TGGTTTTGGTTGGTTTGGTT+TGG | + | chr8_1:10761012-10761031 | None:intergenic | 40.0% |
| !!! | GTTTGTGGTTTTGGTTGGTT+TGG | + | chr8_1:10761017-10761036 | None:intergenic | 40.0% |
| !!! | GTTAGGTTTGTGGTTTTGGT+TGG | + | chr8_1:10761022-10761041 | None:intergenic | 40.0% |
| ! | GGAAGTTAGGTTTGTGGTTT+TGG | + | chr8_1:10761026-10761045 | None:intergenic | 40.0% |
| GAATTGGGAAGTTAGGTTTG+TGG | + | chr8_1:10761032-10761051 | None:intergenic | 40.0% | |
| TTGGAGTGAATTGGGAAGTT+AGG | + | chr8_1:10761039-10761058 | None:intergenic | 40.0% | |
| !!! | GTGGCATTTTGGAGTGAATT+GGG | + | chr8_1:10761047-10761066 | None:intergenic | 40.0% |
| !!! | TGTGGCATTTTGGAGTGAAT+TGG | + | chr8_1:10761048-10761067 | None:intergenic | 40.0% |
| !! | GTTTGTAGGATTTTGAGGAG+GGG | + | chr8_1:10761099-10761118 | None:intergenic | 40.0% |
| !! | GTGTTTGTAGGATTTTGAGG+AGG | + | chr8_1:10761101-10761120 | None:intergenic | 40.0% |
| ! | GGTGTGTTTGTAGGATTTTG+AGG | + | chr8_1:10761104-10761123 | None:intergenic | 40.0% |
| ! | ATGGTTTTTATTGGTGTGGG+GGG | + | chr8_1:10761148-10761167 | None:intergenic | 40.0% |
| AAGTGAAGAAGAGAACAGGA+GGG | + | chr8_1:10761342-10761361 | None:intergenic | 40.0% | |
| GAAAAAACTCCGGCAAGTAA+TGG | + | chr8_1:10761408-10761427 | None:intergenic | 40.0% | |
| !!! | TTGCGTTGCTATTGGTTTTC+AGG | - | chr8_1:10761476-10761495 | Msa1178120:intron | 40.0% |
| TTGTTGAAGGGAAGAAAGCT+TGG | - | chr8_1:10761521-10761540 | Msa1178120:intron | 40.0% | |
| !!! | GGGTGGTTTTGAAGTTAAGA+AGG | - | chr8_1:10761612-10761631 | Msa1178120:intron | 40.0% |
| TTAGACATGCCTTCAATCTG+AGG | - | chr8_1:10761871-10761890 | Msa1178120:intron | 40.0% | |
| !! | ACTTTAGAGCCTCAGATTGA+AGG | + | chr8_1:10761883-10761902 | None:intergenic | 40.0% |
| GTGTCGTATTGTGTCAGTAT+TGG | - | chr8_1:10762004-10762023 | Msa1178120:intron | 40.0% | |
| AACACCGATATGTAGGCAAT+GGG | - | chr8_1:10762089-10762108 | Msa1178120:intron | 40.0% | |
| GTATTAGACATGTCTGACAC+CGG | - | chr8_1:10762158-10762177 | Msa1178120:CDS | 40.0% | |
| CGGATACACATGTTCTACAT+AGG | - | chr8_1:10762185-10762204 | Msa1178120:CDS | 40.0% | |
| AAAGGTGGCTGTGATATACT+AGG | + | chr8_1:10762258-10762277 | None:intergenic | 40.0% | |
| TGGGATTAAGTTCACAAAGG+TGG | + | chr8_1:10762273-10762292 | None:intergenic | 40.0% | |
| ! | CCCAGGTTGAATTAACTTCT+TGG | + | chr8_1:10762412-10762431 | None:intergenic | 40.0% |
| ACAATTCACAACTTACACCC+AGG | + | chr8_1:10762429-10762448 | None:intergenic | 40.0% | |
| ! | TTTTCCTCTTCAAAGTGGGA+AGG | - | chr8_1:10762630-10762649 | Msa1178120:CDS | 40.0% |
| TTTCCTCTTCAAAGTGGGAA+GGG | - | chr8_1:10762631-10762650 | Msa1178120:CDS | 40.0% | |
| !! | TTTGTTCTGGGTTAGCATGT+TGG | - | chr8_1:10762743-10762762 | Msa1178120:intron | 40.0% |
| ! | GTTAGCATGTTGGTTGCTTA+AGG | - | chr8_1:10762753-10762772 | Msa1178120:intron | 40.0% |
| ! | GTTAGGTTTCGATCAAGTTG+TGG | - | chr8_1:10762848-10762867 | Msa1178120:intron | 40.0% |
| GAGGTTGTTAGTGAAACTCA+CGG | - | chr8_1:10762893-10762912 | Msa1178120:intron | 40.0% | |
| ! | GTTCTATGTTTGTTGGGTTC+TGG | - | chr8_1:10762983-10763002 | Msa1178120:intron | 40.0% |
| !!! | TGTTGGGTTCTGGACAATTT+TGG | - | chr8_1:10762993-10763012 | Msa1178120:intron | 40.0% |
| CAGCTAAGTTCCATGTTTGT+TGG | - | chr8_1:10763077-10763096 | Msa1178120:intron | 40.0% | |
| !! | GGGTTGGTAATTGTTGTTGA+TGG | - | chr8_1:10763177-10763196 | Msa1178120:intron | 40.0% |
| ATCATTGGGGGAAAAAAACG+AGG | + | chr8_1:10763250-10763269 | None:intergenic | 40.0% | |
| ! | TCTAGAGTCTACATCATTGG+GGG | + | chr8_1:10763262-10763281 | None:intergenic | 40.0% |
| !! | CTCTAGAGTCTACATCATTG+GGG | + | chr8_1:10763263-10763282 | None:intergenic | 40.0% |
| ATGCAGTGTCATGTGTTGTA+TGG | - | chr8_1:10763373-10763392 | Msa1178120:intron | 40.0% | |
| GAGCATTCGGCTACTAAAAT+TGG | - | chr8_1:10763501-10763520 | Msa1178120:intron | 40.0% | |
| CATTCGGCTACTAAAATTGG+AGG | - | chr8_1:10763504-10763523 | Msa1178120:intron | 40.0% | |
| !! | GGATTCTAGAAGAAGCATCT+TGG | - | chr8_1:10763525-10763544 | Msa1178120:intron | 40.0% |
| ACTTCTCTGCCTAATTACCA+AGG | + | chr8_1:10763652-10763671 | None:intergenic | 40.0% | |
| CACATAAGCCAATTCCATCA+TGG | + | chr8_1:10763771-10763790 | None:intergenic | 40.0% | |
| CATATACTCGTCTGACTTCA+AGG | - | chr8_1:10763821-10763840 | Msa1178120:intron | 40.0% | |
| CTTCAAGGTTTCTTGTCCTA+TGG | - | chr8_1:10763836-10763855 | Msa1178120:intron | 40.0% | |
| CAAAGAGGCAGCACTAATAA+AGG | + | chr8_1:10763920-10763939 | None:intergenic | 40.0% | |
| TGATTTCCATTCCAGCAGTT+AGG | - | chr8_1:10764155-10764174 | Msa1178120:intron | 40.0% | |
| ! | ATCATCTGGAATTGCTTGTG+AGG | - | chr8_1:10764200-10764219 | Msa1178120:intron | 40.0% |
| CAAGGACTAAAGGCAAAAAG+TGG | + | chr8_1:10764325-10764344 | None:intergenic | 40.0% | |
| ! | GTAGGTTGGAGTTCTTATAG+AGG | - | chr8_1:10764759-10764778 | Msa1178120:CDS | 40.0% |
| ACTTAATGATCTCTGCCAGA+AGG | - | chr8_1:10764801-10764820 | Msa1178120:CDS | 40.0% | |
| GGCTTCTTGAATGTCTTTCT+GGG | + | chr8_1:10764827-10764846 | None:intergenic | 40.0% | |
| TGGCTTCTTGAATGTCTTTC+TGG | + | chr8_1:10764828-10764847 | None:intergenic | 40.0% | |
| ! | GTGCGCATGAATCACATTTT+CGG | + | chr8_1:10764857-10764876 | None:intergenic | 40.0% |
| GGTAGTTTCTCTTTGCAACA+AGG | + | chr8_1:10764879-10764898 | None:intergenic | 40.0% | |
| !! | TCTAAGGAGCATTCACCAAA+TGG | - | chr8_1:10764901-10764920 | Msa1178120:CDS | 40.0% |
| TTCTCTTCCATTTAGGAGCT+AGG | + | chr8_1:10764931-10764950 | None:intergenic | 40.0% | |
| TGGTGAAGAAGAGAAGGAGT+TGG | + | chr8_1:10760924-10760943 | None:intergenic | 45.0% | |
| !! | TTTTAGGGGGGTGTGTTTGT+AGG | + | chr8_1:10761113-10761132 | None:intergenic | 45.0% |
| !! | AGGTGTGGAACATTTTAGGG+GGG | + | chr8_1:10761125-10761144 | None:intergenic | 45.0% |
| ! | GAGGTGTGGAACATTTTAGG+GGG | + | chr8_1:10761126-10761145 | None:intergenic | 45.0% |
| !! | GGAGGTGTGGAACATTTTAG+GGG | + | chr8_1:10761127-10761146 | None:intergenic | 45.0% |
| !! | GGGAGGTGTGGAACATTTTA+GGG | + | chr8_1:10761128-10761147 | None:intergenic | 45.0% |
| ! | GCATTCCTCGTTCTTGGTTT+TGG | + | chr8_1:10761207-10761226 | None:intergenic | 45.0% |
| ACTCTACAACCACACCAACT+GGG | - | chr8_1:10761240-10761259 | Msa1178120:CDS | 45.0% | |
| AGAAAAAGTGACGCACGTGA+CGG | + | chr8_1:10761285-10761304 | None:intergenic | 45.0% | |
| GAAGTGAAGAAGAGAACAGG+AGG | + | chr8_1:10761343-10761362 | None:intergenic | 45.0% | |
| CGTAGCACAGGAAAAAACTC+CGG | + | chr8_1:10761418-10761437 | None:intergenic | 45.0% | |
| !!! | GCTATTGGTTTTCAGGACTG+AGG | - | chr8_1:10761483-10761502 | Msa1178120:intron | 45.0% |
| ATGGCTACTGTTGATGTCAG+TGG | - | chr8_1:10761586-10761605 | Msa1178120:intron | 45.0% | |
| TGGCTACTGTTGATGTCAGT+GGG | - | chr8_1:10761587-10761606 | Msa1178120:intron | 45.0% | |
| TACTGTTGATGTCAGTGGGA+AGG | - | chr8_1:10761591-10761610 | Msa1178120:intron | 45.0% | |
| ACTGTTGATGTCAGTGGGAA+GGG | - | chr8_1:10761592-10761611 | Msa1178120:intron | 45.0% | |
| AGGACACAACACCGATATGT+AGG | - | chr8_1:10762082-10762101 | Msa1178120:intron | 45.0% | |
| CAACACCGATATGTAGGCAA+TGG | - | chr8_1:10762088-10762107 | Msa1178120:intron | 45.0% | |
| GTGGCTGTGATATACTAGGA+TGG | + | chr8_1:10762254-10762273 | None:intergenic | 45.0% | |
| CCAGCAACTGTAATGCGATT+GGG | + | chr8_1:10762292-10762311 | None:intergenic | 45.0% | |
| CCAATCGCATTACAGTTGCT+GGG | - | chr8_1:10762290-10762309 | Msa1178120:intron | 45.0% | |
| TCTTCAAAGTGGGAAGGGTT+GGG | - | chr8_1:10762636-10762655 | Msa1178120:CDS | 45.0% | |
| ! | GTTTCGATCAAGTTGTGGGT+GGG | - | chr8_1:10762853-10762872 | Msa1178120:intron | 45.0% |
| ! | TTTCGATCAAGTTGTGGGTG+GGG | - | chr8_1:10762854-10762873 | Msa1178120:intron | 45.0% |
| AAAGGGTAGCCCAACAAACA+TGG | + | chr8_1:10763090-10763109 | None:intergenic | 45.0% | |
| ! | TCTAGAGAAGCATGCATGCA+AGG | - | chr8_1:10763276-10763295 | Msa1178120:intron | 45.0% |
| TGGCTTATGTGAACAGCTTC+TGG | - | chr8_1:10763780-10763799 | Msa1178120:intron | 45.0% | |
| GGCTTATGTGAACAGCTTCT+GGG | - | chr8_1:10763781-10763800 | Msa1178120:intron | 45.0% | |
| TGACGCTCCCTATCATACTT+TGG | - | chr8_1:10763863-10763882 | Msa1178120:intron | 45.0% | |
| GACGCTCCCTATCATACTTT+GGG | - | chr8_1:10763864-10763883 | Msa1178120:intron | 45.0% | |
| GCAGCACTAATAAAGGTAGC+AGG | + | chr8_1:10763913-10763932 | None:intergenic | 45.0% | |
| CCAAAACCTAACTGCTGGAA+TGG | + | chr8_1:10764164-10764183 | None:intergenic | 45.0% | |
| ! | CCATTCCAGCAGTTAGGTTT+TGG | - | chr8_1:10764161-10764180 | Msa1178120:intron | 45.0% |
| !! | TTCCAGCAGTTAGGTTTTGG+TGG | - | chr8_1:10764164-10764183 | Msa1178120:intron | 45.0% |
| !! | TCCAGCAGTTAGGTTTTGGT+GGG | - | chr8_1:10764165-10764184 | Msa1178120:intron | 45.0% |
| TTGGTGAATGCTCCTTAGAG+TGG | + | chr8_1:10764900-10764919 | None:intergenic | 45.0% | |
| !! | AGGAGGTGTGTGTGGCATTT+TGG | + | chr8_1:10761058-10761077 | None:intergenic | 50.0% |
| !! | TGTAGGATTTTGAGGAGGGG+AGG | + | chr8_1:10761096-10761115 | None:intergenic | 50.0% |
| !! | GGGGAGGTGTGGAACATTTT+AGG | + | chr8_1:10761129-10761148 | None:intergenic | 50.0% |
| ! | GTTTTTATTGGTGTGGGGGG+AGG | + | chr8_1:10761145-10761164 | None:intergenic | 50.0% |
| TGTACGGAGGAGGGTGATTA+TGG | + | chr8_1:10761167-10761186 | None:intergenic | 50.0% | |
| GCAGACCAAAACCAAGAACG+AGG | - | chr8_1:10761199-10761218 | Msa1178120:CDS | 50.0% | |
| CACTCTACAACCACACCAAC+TGG | - | chr8_1:10761239-10761258 | Msa1178120:CDS | 50.0% | |
| TAAAGAGAGGATGACACGCG+AGG | + | chr8_1:10761317-10761336 | None:intergenic | 50.0% | |
| GAACAGGAGGGACTAAAGAG+AGG | + | chr8_1:10761330-10761349 | None:intergenic | 50.0% | |
| ! | CAAGTAATGGAACCAGACGG+CGG | + | chr8_1:10761395-10761414 | None:intergenic | 50.0% |
| ! | CGGCAAGTAATGGAACCAGA+CGG | + | chr8_1:10761398-10761417 | None:intergenic | 50.0% |
| ! | CGTCTGGTTCCATTACTTGC+CGG | - | chr8_1:10761396-10761415 | Msa1178120:intron | 50.0% |
| GCAGGAGCAGTAAGCTGATA+AGG | + | chr8_1:10761454-10761473 | None:intergenic | 50.0% | |
| TCCTGCTCTTGCGTTGCTAT+TGG | - | chr8_1:10761468-10761487 | Msa1178120:intron | 50.0% | |
| ACCAATAGCAACGCAAGAGC+AGG | + | chr8_1:10761472-10761491 | None:intergenic | 50.0% | |
| !! | CACACATGTCGGTGTTGTGT+TGG | - | chr8_1:10762136-10762155 | Msa1178120:CDS | 50.0% |
| TAGACATGTCTGACACCGGA+TGG | - | chr8_1:10762162-10762181 | Msa1178120:CDS | 50.0% | |
| GAACATGTGTATCCGCCATC+CGG | + | chr8_1:10762180-10762199 | None:intergenic | 50.0% | |
| CCCAATCGCATTACAGTTGC+TGG | - | chr8_1:10762289-10762308 | Msa1178120:intron | 50.0% | |
| CCCAGCAACTGTAATGCGAT+TGG | + | chr8_1:10762293-10762312 | None:intergenic | 50.0% | |
| ! | CAACCCTTCCCACTTTGAAG+AGG | + | chr8_1:10762637-10762656 | None:intergenic | 50.0% |
| CTCTTCAAAGTGGGAAGGGT+TGG | - | chr8_1:10762635-10762654 | Msa1178120:CDS | 50.0% | |
| ! | GGTTTCGATCAAGTTGTGGG+TGG | - | chr8_1:10762852-10762871 | Msa1178120:intron | 50.0% |
| !! | TCAAGTTGTGGGTGGGGTTT+TGG | - | chr8_1:10762860-10762879 | Msa1178120:intron | 50.0% |
| ! | CAAGTTGTGGGTGGGGTTTT+GGG | - | chr8_1:10762861-10762880 | Msa1178120:intron | 50.0% |
| TGCAGTGACGTGTTGTGTCT+AGG | - | chr8_1:10762931-10762950 | Msa1178120:intron | 50.0% | |
| TGACGTGTTGTGTCTAGGCT+TGG | - | chr8_1:10762936-10762955 | Msa1178120:intron | 50.0% | |
| ACGAGGAACCCGATCAAACA+TGG | + | chr8_1:10763233-10763252 | None:intergenic | 50.0% | |
| ACCCACCAAAACCTAACTGC+TGG | + | chr8_1:10764169-10764188 | None:intergenic | 50.0% | |
| !! | AGCAGTTAGGTTTTGGTGGG+TGG | - | chr8_1:10764168-10764187 | Msa1178120:intron | 50.0% |
| GAATGTCTTTCTGGGCCTTC+TGG | + | chr8_1:10764819-10764838 | None:intergenic | 50.0% | |
| !! | AGGAGCATTCACCAAATGGC+TGG | - | chr8_1:10764905-10764924 | Msa1178120:CDS | 50.0% |
| !! | TTGGTTGGTGTGTGGTGGGT+GGG | + | chr8_1:10760894-10760913 | None:intergenic | 55.0% |
| ! | ATTGGTTGGTGTGTGGTGGG+TGG | + | chr8_1:10760895-10760914 | None:intergenic | 55.0% |
| ! | GTTGTTGGAGGAGGTGTGTG+TGG | + | chr8_1:10761066-10761085 | None:intergenic | 55.0% |
| !! | GGAGGGTTAGTTGTTGGAGG+AGG | + | chr8_1:10761075-10761094 | None:intergenic | 55.0% |
| !! | GGAGGAGGGTTAGTTGTTGG+AGG | + | chr8_1:10761078-10761097 | None:intergenic | 55.0% |
| !! | AGGGGAGGAGGGTTAGTTGT+TGG | + | chr8_1:10761081-10761100 | None:intergenic | 55.0% |
| !! | GGATTTTGAGGAGGGGAGGA+GGG | + | chr8_1:10761092-10761111 | None:intergenic | 55.0% |
| !! | AGGATTTTGAGGAGGGGAGG+AGG | + | chr8_1:10761093-10761112 | None:intergenic | 55.0% |
| ! | GTCTGGGATTGTACGGAGGA+GGG | + | chr8_1:10761176-10761195 | None:intergenic | 55.0% |
| ! | AGTCTGGGATTGTACGGAGG+AGG | + | chr8_1:10761177-10761196 | None:intergenic | 55.0% |
| TCCTCCGTACAATCCCAGAC+TGG | - | chr8_1:10761176-10761195 | Msa1178120:CDS | 55.0% | |
| CCTCCGTACAATCCCAGACT+GGG | - | chr8_1:10761177-10761196 | Msa1178120:CDS | 55.0% | |
| ! | CTGCCCAGTCTGGGATTGTA+CGG | + | chr8_1:10761183-10761202 | None:intergenic | 55.0% |
| !! | GGTTTTGGTCTGCCCAGTCT+GGG | + | chr8_1:10761192-10761211 | None:intergenic | 55.0% |
| !!! | TGGTTTTGGTCTGCCCAGTC+TGG | + | chr8_1:10761193-10761212 | None:intergenic | 55.0% |
| ! | AAAGTGACGCACGTGACGGA+GGG | + | chr8_1:10761281-10761300 | None:intergenic | 55.0% |
| AAAAGTGACGCACGTGACGG+AGG | + | chr8_1:10761282-10761301 | None:intergenic | 55.0% | |
| GTTGTAAGCGGCGATGACAG+CGG | + | chr8_1:10761371-10761390 | None:intergenic | 55.0% | |
| AGCGAAGAAGCTCGTAGCAC+AGG | + | chr8_1:10761430-10761449 | None:intergenic | 55.0% | |
| GTTGATGTCAGTGGGAAGGG+TGG | - | chr8_1:10761595-10761614 | Msa1178120:intron | 55.0% | |
| ACATGTCTGACACCGGATGG+CGG | - | chr8_1:10762165-10762184 | Msa1178120:CDS | 55.0% | |
| !!! | TTGTGGGTGGGGTTTTGGGT+TGG | - | chr8_1:10762865-10762884 | Msa1178120:intron | 55.0% |
| !!! | GGGTTTTGGGTTGGTAGTCG+AGG | - | chr8_1:10762874-10762893 | Msa1178120:intron | 55.0% |
| TACAGTCAAGGCTGTCTCCC+AGG | - | chr8_1:10763136-10763155 | Msa1178120:intron | 55.0% | |
| !! | TAGGGAGCGTCAGATGCCAT+AGG | + | chr8_1:10763855-10763874 | None:intergenic | 55.0% |
| TAGGAGCTAGGCCAGCCATT+TGG | + | chr8_1:10764919-10764938 | None:intergenic | 55.0% | |
| !! | TGGCTGGCCTAGCTCCTAAA+TGG | - | chr8_1:10764921-10764940 | Msa1178120:CDS | 55.0% |
| TATTGGTGTGGGGGGAGGTG+TGG | + | chr8_1:10761140-10761159 | None:intergenic | 60.0% | |
| ! | CCCAGTCTGGGATTGTACGG+AGG | + | chr8_1:10761180-10761199 | None:intergenic | 60.0% |
| ! | GGTGTGTGACCCAGTTGGTG+TGG | + | chr8_1:10761252-10761271 | None:intergenic | 60.0% |
| GGAACGGTGTGTGACCCAGT+TGG | + | chr8_1:10761257-10761276 | None:intergenic | 60.0% | |
| CCAGACGGCGGAGTTGTAAG+CGG | + | chr8_1:10761383-10761402 | None:intergenic | 60.0% | |
| ! | GCACGTGACGGAGGGAGGAA+CGG | + | chr8_1:10761273-10761292 | None:intergenic | 65.0% |
| CCGCTTACAACTCCGCCGTC+TGG | - | chr8_1:10761380-10761399 | Msa1178120:intron | 65.0% | |
| ! | GTGACGCACGTGACGGAGGG+AGG | + | chr8_1:10761278-10761297 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 10760844 | 10765210 | 10760844 | ID=Msa1178120;Name=Msa1178120 |
| chr8_1 | mRNA | 10760844 | 10765210 | 10760844 | ID=Msa1178120-mRNA-1;Parent=Msa1178120;Name=Msa1178120-mRNA-1;_AED=0.01;_eAED=0.01;_QI=148|1|1|1|1|1|4|271|411 |
| chr8_1 | exon | 10760844 | 10761291 | 10760844 | ID=Msa1178120-mRNA-1:exon:3719;Parent=Msa1178120-mRNA-1 |
| chr8_1 | exon | 10762100 | 10762306 | 10762100 | ID=Msa1178120-mRNA-1:exon:3718;Parent=Msa1178120-mRNA-1 |
| chr8_1 | exon | 10762508 | 10762675 | 10762508 | ID=Msa1178120-mRNA-1:exon:3717;Parent=Msa1178120-mRNA-1 |
| chr8_1 | exon | 10764379 | 10765210 | 10764379 | ID=Msa1178120-mRNA-1:exon:3716;Parent=Msa1178120-mRNA-1 |
| chr8_1 | five_prime_UTR | 10765063 | 10765210 | 10765063 | ID=Msa1178120-mRNA-1:five_prime_utr;Parent=Msa1178120-mRNA-1 |
| chr8_1 | CDS | 10764379 | 10765062 | 10764379 | ID=Msa1178120-mRNA-1:cds;Parent=Msa1178120-mRNA-1 |
| chr8_1 | CDS | 10762508 | 10762675 | 10762508 | ID=Msa1178120-mRNA-1:cds;Parent=Msa1178120-mRNA-1 |
| chr8_1 | CDS | 10762100 | 10762306 | 10762100 | ID=Msa1178120-mRNA-1:cds;Parent=Msa1178120-mRNA-1 |
| chr8_1 | CDS | 10761115 | 10761291 | 10761115 | ID=Msa1178120-mRNA-1:cds;Parent=Msa1178120-mRNA-1 |
| chr8_1 | three_prime_UTR | 10760844 | 10761114 | 10760844 | ID=Msa1178120-mRNA-1:three_prime_utr;Parent=Msa1178120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
