Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0887100 | XP_003619105.1 | 88.148 | 270 | 16 | 2 | 1 | 270 | 1 | 254 | 9.42e-164 | 464 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0887100 | G7KIB4 | 88.148 | 270 | 16 | 2 | 1 | 270 | 1 | 254 | 4.50e-164 | 464 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004340 | Msa0887100 | 0.862210 | 5.953414e-64 | -8.615850e-47 |
Msa0005690 | Msa0887100 | 0.808880 | 2.491808e-50 | -8.615850e-47 |
Msa0009530 | Msa0887100 | 0.830516 | 2.809965e-55 | -8.615850e-47 |
Msa0009560 | Msa0887100 | 0.837525 | 4.937347e-57 | -8.615850e-47 |
Msa0012380 | Msa0887100 | 0.869036 | 4.182221e-66 | -8.615850e-47 |
Msa0020320 | Msa0887100 | 0.814894 | 1.221285e-51 | -8.615850e-47 |
Msa0024500 | Msa0887100 | 0.800832 | 1.197696e-48 | -8.615850e-47 |
Msa0027030 | Msa0887100 | 0.816266 | 6.043243e-52 | -8.615850e-47 |
Msa0034100 | Msa0887100 | 0.819240 | 1.288237e-52 | -8.615850e-47 |
Msa0037180 | Msa0887100 | -0.801061 | 1.075420e-48 | -8.615850e-47 |
Msa0037270 | Msa0887100 | 0.830656 | 2.597237e-55 | -8.615850e-47 |
Msa0044780 | Msa0887100 | 0.825125 | 5.557816e-54 | -8.615850e-47 |
Msa0046050 | Msa0887100 | 0.816182 | 6.308333e-52 | -8.615850e-47 |
Msa0046200 | Msa0887100 | -0.808046 | 3.754034e-50 | -8.615850e-47 |
Msa0046970 | Msa0887100 | -0.807303 | 5.399479e-50 | -8.615850e-47 |
Msa0053960 | Msa0887100 | 0.803554 | 3.298369e-49 | -8.615850e-47 |
Msa0061060 | Msa0887100 | 0.802528 | 5.376329e-49 | -8.615850e-47 |
Msa0064550 | Msa0887100 | 0.803828 | 2.892926e-49 | -8.615850e-47 |
Msa0072390 | Msa0887100 | 0.865910 | 4.190671e-65 | -8.615850e-47 |
Msa0072830 | Msa0887100 | 0.829384 | 5.305933e-55 | -8.615850e-47 |
Msa0072860 | Msa0887100 | 0.826318 | 2.897257e-54 | -8.615850e-47 |
Msa0080810 | Msa0887100 | 0.818283 | 2.125262e-52 | -8.615850e-47 |
Msa0081120 | Msa0887100 | 0.850258 | 1.907139e-60 | -8.615850e-47 |
Msa0081790 | Msa0887100 | 0.813624 | 2.329801e-51 | -8.615850e-47 |
Msa0091090 | Msa0887100 | 0.838186 | 3.339014e-57 | -8.615850e-47 |
Msa0096510 | Msa0887100 | 0.812238 | 4.688212e-51 | -8.615850e-47 |
Msa0105590 | Msa0887100 | 0.810845 | 9.411059e-51 | -8.615850e-47 |
Msa0114700 | Msa0887100 | 0.818411 | 1.988107e-52 | -8.615850e-47 |
Msa0116470 | Msa0887100 | 0.813371 | 2.647784e-51 | -8.615850e-47 |
Msa0116510 | Msa0887100 | 0.831598 | 1.524210e-55 | -8.615850e-47 |
Msa0120320 | Msa0887100 | 0.851570 | 8.144630e-61 | -8.615850e-47 |
Msa0604880 | Msa0887100 | 0.859349 | 4.398939e-63 | -8.615850e-47 |
Msa0608780 | Msa0887100 | 0.861473 | 1.001202e-63 | -8.615850e-47 |
Msa0608820 | Msa0887100 | -0.811350 | 7.316811e-51 | -8.615850e-47 |
Msa0610700 | Msa0887100 | 0.832539 | 8.922331e-56 | -8.615850e-47 |
Msa0610780 | Msa0887100 | 0.903553 | 3.079865e-79 | -8.615850e-47 |
Msa0610810 | Msa0887100 | 0.894109 | 3.358113e-75 | -8.615850e-47 |
Msa0615430 | Msa0887100 | 0.809034 | 2.309763e-50 | -8.615850e-47 |
Msa0619390 | Msa0887100 | 0.809615 | 1.734002e-50 | -8.615850e-47 |
Msa0622250 | Msa0887100 | 0.810143 | 1.334436e-50 | -8.615850e-47 |
Msa0624040 | Msa0887100 | 0.814357 | 1.605630e-51 | -8.615850e-47 |
Msa0624930 | Msa0887100 | -0.833091 | 6.508912e-56 | -8.615850e-47 |
Msa0627050 | Msa0887100 | 0.813240 | 2.828621e-51 | -8.615850e-47 |
Msa0627580 | Msa0887100 | -0.812004 | 5.273580e-51 | -8.615850e-47 |
Msa0631820 | Msa0887100 | -0.803234 | 3.842399e-49 | -8.615850e-47 |
Msa0634260 | Msa0887100 | 0.809866 | 1.530874e-50 | -8.615850e-47 |
Msa0644630 | Msa0887100 | 0.807994 | 3.850656e-50 | -8.615850e-47 |
Msa0646190 | Msa0887100 | 0.858083 | 1.050671e-62 | -8.615850e-47 |
Msa0646340 | Msa0887100 | 0.822613 | 2.156868e-53 | -8.615850e-47 |
Msa0649250 | Msa0887100 | 0.873844 | 1.072618e-67 | -8.615850e-47 |
Msa0651310 | Msa0887100 | 0.901900 | 1.678033e-78 | -8.615850e-47 |
Msa0654880 | Msa0887100 | 0.813868 | 2.058568e-51 | -8.615850e-47 |
Msa0670580 | Msa0887100 | -0.819239 | 1.289091e-52 | -8.615850e-47 |
Msa0671400 | Msa0887100 | -0.800474 | 1.416932e-48 | -8.615850e-47 |
Msa0675010 | Msa0887100 | 0.814062 | 1.865084e-51 | -8.615850e-47 |
Msa0679780 | Msa0887100 | 0.806409 | 8.340869e-50 | -8.615850e-47 |
Msa0681210 | Msa0887100 | 0.818120 | 2.313452e-52 | -8.615850e-47 |
Msa0691610 | Msa0887100 | -0.808037 | 3.769902e-50 | -8.615850e-47 |
Msa0693400 | Msa0887100 | 0.845845 | 3.150485e-59 | -8.615850e-47 |
Msa0693500 | Msa0887100 | 0.903751 | 2.508030e-79 | -8.615850e-47 |
Msa0698480 | Msa0887100 | 0.801419 | 9.085131e-49 | -8.615850e-47 |
Msa0698650 | Msa0887100 | 0.821131 | 4.751919e-53 | -8.615850e-47 |
Msa0702310 | Msa0887100 | 0.803254 | 3.806199e-49 | -8.615850e-47 |
Msa0702360 | Msa0887100 | 0.858514 | 7.820544e-63 | -8.615850e-47 |
Msa0702560 | Msa0887100 | 0.866688 | 2.373870e-65 | -8.615850e-47 |
Msa0702690 | Msa0887100 | 0.815082 | 1.109122e-51 | -8.615850e-47 |
Msa0705810 | Msa0887100 | 0.882704 | 8.329775e-71 | -8.615850e-47 |
Msa0712670 | Msa0887100 | 0.801831 | 7.479056e-49 | -8.615850e-47 |
Msa0715510 | Msa0887100 | -0.804619 | 1.980556e-49 | -8.615850e-47 |
Msa0732970 | Msa0887100 | -0.811209 | 7.848442e-51 | -8.615850e-47 |
Msa0742090 | Msa0887100 | 0.866416 | 2.896963e-65 | -8.615850e-47 |
Msa0745140 | Msa0887100 | -0.806378 | 8.467641e-50 | -8.615850e-47 |
Msa0748330 | Msa0887100 | 0.804477 | 2.119979e-49 | -8.615850e-47 |
Msa0748980 | Msa0887100 | 0.818455 | 1.942778e-52 | -8.615850e-47 |
Msa0749150 | Msa0887100 | 0.824427 | 8.117935e-54 | -8.615850e-47 |
Msa0754020 | Msa0887100 | 0.828959 | 6.728087e-55 | -8.615850e-47 |
Msa0756670 | Msa0887100 | 0.807064 | 6.067818e-50 | -8.615850e-47 |
Msa0773960 | Msa0887100 | -0.824112 | 9.627606e-54 | -8.615850e-47 |
Msa0776640 | Msa0887100 | -0.804575 | 2.022458e-49 | -8.615850e-47 |
Msa0786100 | Msa0887100 | 0.828068 | 1.104004e-54 | -8.615850e-47 |
Msa0788160 | Msa0887100 | 0.829089 | 6.255981e-55 | -8.615850e-47 |
Msa0790650 | Msa0887100 | 0.806195 | 9.256832e-50 | -8.615850e-47 |
Msa0793100 | Msa0887100 | 0.826610 | 2.467769e-54 | -8.615850e-47 |
Msa0794030 | Msa0887100 | -0.806757 | 7.042925e-50 | -8.615850e-47 |
Msa0797980 | Msa0887100 | 0.800392 | 1.472636e-48 | -8.615850e-47 |
Msa0803530 | Msa0887100 | 0.852444 | 4.598203e-61 | -8.615850e-47 |
Msa0804170 | Msa0887100 | -0.804921 | 1.712574e-49 | -8.615850e-47 |
Msa0807100 | Msa0887100 | 0.832969 | 6.980458e-56 | -8.615850e-47 |
Msa0823310 | Msa0887100 | 0.860701 | 1.719134e-63 | -8.615850e-47 |
Msa0825520 | Msa0887100 | 0.823374 | 1.433924e-53 | -8.615850e-47 |
Msa0825920 | Msa0887100 | -0.806814 | 6.853104e-50 | -8.615850e-47 |
Msa0828900 | Msa0887100 | 0.806520 | 7.905912e-50 | -8.615850e-47 |
Msa0833030 | Msa0887100 | 0.831344 | 1.760126e-55 | -8.615850e-47 |
Msa0836060 | Msa0887100 | 0.805835 | 1.101589e-49 | -8.615850e-47 |
Msa0128110 | Msa0887100 | 0.820383 | 7.063020e-53 | -8.615850e-47 |
Msa0131090 | Msa0887100 | 0.801935 | 7.121075e-49 | -8.615850e-47 |
Msa0135330 | Msa0887100 | -0.800936 | 1.140686e-48 | -8.615850e-47 |
Msa0137010 | Msa0887100 | 0.835726 | 1.418501e-56 | -8.615850e-47 |
Msa0143280 | Msa0887100 | 0.830063 | 3.626501e-55 | -8.615850e-47 |
Msa0147540 | Msa0887100 | 0.829090 | 6.252927e-55 | -8.615850e-47 |
Msa0154240 | Msa0887100 | 0.821015 | 5.054087e-53 | -8.615850e-47 |
Msa0157030 | Msa0887100 | 0.810726 | 9.986669e-51 | -8.615850e-47 |
Msa0160650 | Msa0887100 | 0.813067 | 3.087688e-51 | -8.615850e-47 |
Msa0163530 | Msa0887100 | 0.823549 | 1.304591e-53 | -8.615850e-47 |
Msa0163960 | Msa0887100 | 0.869664 | 2.613596e-66 | -8.615850e-47 |
Msa0167150 | Msa0887100 | 0.814891 | 1.222699e-51 | -8.615850e-47 |
Msa0173370 | Msa0887100 | 0.822419 | 2.392394e-53 | -8.615850e-47 |
Msa0180100 | Msa0887100 | 0.851675 | 7.605753e-61 | -8.615850e-47 |
Msa0183200 | Msa0887100 | 0.822038 | 2.933081e-53 | -8.615850e-47 |
Msa0184510 | Msa0887100 | 0.868061 | 8.638100e-66 | -8.615850e-47 |
Msa0187980 | Msa0887100 | 0.886213 | 4.160555e-72 | -8.615850e-47 |
Msa0192470 | Msa0887100 | -0.807967 | 3.903039e-50 | -8.615850e-47 |
Msa0195140 | Msa0887100 | 0.831579 | 1.540985e-55 | -8.615850e-47 |
Msa0207680 | Msa0887100 | -0.862885 | 3.689628e-64 | -8.615850e-47 |
Msa0207690 | Msa0887100 | -0.841926 | 3.532586e-58 | -8.615850e-47 |
Msa0209360 | Msa0887100 | -0.817451 | 3.275696e-52 | -8.615850e-47 |
Msa0218430 | Msa0887100 | 0.802395 | 5.726974e-49 | -8.615850e-47 |
Msa0225070 | Msa0887100 | 0.822954 | 1.796887e-53 | -8.615850e-47 |
Msa0238110 | Msa0887100 | -0.803130 | 4.036759e-49 | -8.615850e-47 |
Msa0367590 | Msa0887100 | 0.809365 | 1.962084e-50 | -8.615850e-47 |
Msa0371350 | Msa0887100 | 0.815574 | 8.622286e-52 | -8.615850e-47 |
Msa0375570 | Msa0887100 | 0.825687 | 4.093027e-54 | -8.615850e-47 |
Msa0378310 | Msa0887100 | 0.819711 | 1.006227e-52 | -8.615850e-47 |
Msa0378670 | Msa0887100 | 0.811240 | 7.730353e-51 | -8.615850e-47 |
Msa0378700 | Msa0887100 | 0.809446 | 1.884430e-50 | -8.615850e-47 |
Msa0386880 | Msa0887100 | -0.809537 | 1.801481e-50 | -8.615850e-47 |
Msa0392050 | Msa0887100 | 0.814607 | 1.413203e-51 | -8.615850e-47 |
Msa0403740 | Msa0887100 | 0.801791 | 7.622611e-49 | -8.615850e-47 |
Msa0404060 | Msa0887100 | 0.873312 | 1.621089e-67 | -8.615850e-47 |
Msa0404070 | Msa0887100 | 0.843828 | 1.101868e-58 | -8.615850e-47 |
Msa0415200 | Msa0887100 | 0.802216 | 6.232845e-49 | -8.615850e-47 |
Msa0419420 | Msa0887100 | 0.819786 | 9.672195e-53 | -8.615850e-47 |
Msa0424220 | Msa0887100 | 0.822965 | 1.786445e-53 | -8.615850e-47 |
Msa0425320 | Msa0887100 | 0.830922 | 2.235704e-55 | -8.615850e-47 |
Msa0428330 | Msa0887100 | 0.881967 | 1.545417e-70 | -8.615850e-47 |
Msa0434090 | Msa0887100 | -0.814426 | 1.550393e-51 | -8.615850e-47 |
Msa0436840 | Msa0887100 | -0.809985 | 1.443293e-50 | -8.615850e-47 |
Msa0437790 | Msa0887100 | 0.821422 | 4.072625e-53 | -8.615850e-47 |
Msa0456450 | Msa0887100 | 0.808893 | 2.475388e-50 | -8.615850e-47 |
Msa0457070 | Msa0887100 | 0.817618 | 3.004246e-52 | -8.615850e-47 |
Msa0468360 | Msa0887100 | 0.820576 | 6.376513e-53 | -8.615850e-47 |
Msa0469950 | Msa0887100 | 0.815229 | 1.028800e-51 | -8.615850e-47 |
Msa0471130 | Msa0887100 | 0.807453 | 5.017921e-50 | -8.615850e-47 |
Msa0471760 | Msa0887100 | 0.817534 | 3.136880e-52 | -8.615850e-47 |
Msa0476960 | Msa0887100 | -0.806191 | 9.273877e-50 | -8.615850e-47 |
Msa0477030 | Msa0887100 | -0.801783 | 7.651862e-49 | -8.615850e-47 |
Msa0477900 | Msa0887100 | -0.830507 | 2.825143e-55 | -8.615850e-47 |
Msa0238860 | Msa0887100 | 0.814813 | 1.272804e-51 | -8.615850e-47 |
Msa0240590 | Msa0887100 | 0.836902 | 7.126932e-57 | -8.615850e-47 |
Msa0242820 | Msa0887100 | -0.803936 | 2.747964e-49 | -8.615850e-47 |
Msa0253160 | Msa0887100 | 0.805876 | 1.080224e-49 | -8.615850e-47 |
Msa0256540 | Msa0887100 | -0.806271 | 8.921873e-50 | -8.615850e-47 |
Msa0266140 | Msa0887100 | 0.813707 | 2.233293e-51 | -8.615850e-47 |
Msa0267450 | Msa0887100 | 0.815689 | 8.128065e-52 | -8.615850e-47 |
Msa0267510 | Msa0887100 | 0.814480 | 1.508045e-51 | -8.615850e-47 |
Msa0279090 | Msa0887100 | 0.816815 | 4.551946e-52 | -8.615850e-47 |
Msa0279810 | Msa0887100 | -0.800264 | 1.563371e-48 | -8.615850e-47 |
Msa0287640 | Msa0887100 | -0.803651 | 3.148514e-49 | -8.615850e-47 |
Msa0287660 | Msa0887100 | -0.814528 | 1.471574e-51 | -8.615850e-47 |
Msa0291940 | Msa0887100 | 0.807647 | 4.564796e-50 | -8.615850e-47 |
Msa0295680 | Msa0887100 | -0.810634 | 1.045336e-50 | -8.615850e-47 |
Msa0303920 | Msa0887100 | -0.836417 | 9.473965e-57 | -8.615850e-47 |
Msa0304060 | Msa0887100 | 0.824521 | 7.717608e-54 | -8.615850e-47 |
Msa0306160 | Msa0887100 | 0.803185 | 3.933789e-49 | -8.615850e-47 |
Msa0316610 | Msa0887100 | 0.830414 | 2.975883e-55 | -8.615850e-47 |
Msa0343370 | Msa0887100 | 0.825662 | 4.147453e-54 | -8.615850e-47 |
Msa0344680 | Msa0887100 | 0.818417 | 1.981485e-52 | -8.615850e-47 |
Msa0349930 | Msa0887100 | -0.826496 | 2.628446e-54 | -8.615850e-47 |
Msa0364030 | Msa0887100 | 0.801778 | 7.669739e-49 | -8.615850e-47 |
Msa0508780 | Msa0887100 | 0.827702 | 1.351680e-54 | -8.615850e-47 |
Msa0515460 | Msa0887100 | 0.824651 | 7.191277e-54 | -8.615850e-47 |
Msa0518480 | Msa0887100 | 0.808412 | 3.137296e-50 | -8.615850e-47 |
Msa0521940 | Msa0887100 | -0.801755 | 7.750820e-49 | -8.615850e-47 |
Msa0524830 | Msa0887100 | 0.813224 | 2.852066e-51 | -8.615850e-47 |
Msa0529360 | Msa0887100 | -0.823323 | 1.473488e-53 | -8.615850e-47 |
Msa0530340 | Msa0887100 | 0.848285 | 6.755585e-60 | -8.615850e-47 |
Msa0545230 | Msa0887100 | 0.833990 | 3.881691e-56 | -8.615850e-47 |
Msa0548210 | Msa0887100 | 0.813929 | 1.995849e-51 | -8.615850e-47 |
Msa0549540 | Msa0887100 | 0.856621 | 2.842431e-62 | -8.615850e-47 |
Msa0555280 | Msa0887100 | -0.812348 | 4.436703e-51 | -8.615850e-47 |
Msa0556070 | Msa0887100 | 0.862009 | 6.863993e-64 | -8.615850e-47 |
Msa0561420 | Msa0887100 | 0.804260 | 2.353186e-49 | -8.615850e-47 |
Msa0565760 | Msa0887100 | 0.812929 | 3.310629e-51 | -8.615850e-47 |
Msa0565860 | Msa0887100 | 0.828803 | 7.337518e-55 | -8.615850e-47 |
Msa0566090 | Msa0887100 | 0.827444 | 1.559531e-54 | -8.615850e-47 |
Msa0568460 | Msa0887100 | 0.802584 | 5.234979e-49 | -8.615850e-47 |
Msa0569230 | Msa0887100 | 0.818892 | 1.546455e-52 | -8.615850e-47 |
Msa0570680 | Msa0887100 | 0.870260 | 1.668500e-66 | -8.615850e-47 |
Msa0575380 | Msa0887100 | -0.829638 | 4.602637e-55 | -8.615850e-47 |
Msa0576180 | Msa0887100 | -0.837837 | 4.105198e-57 | -8.615850e-47 |
Msa0577050 | Msa0887100 | 0.831341 | 1.764015e-55 | -8.615850e-47 |
Msa0579070 | Msa0887100 | 0.818865 | 1.568334e-52 | -8.615850e-47 |
Msa0579170 | Msa0887100 | 0.871849 | 4.995572e-67 | -8.615850e-47 |
Msa0579230 | Msa0887100 | 0.880252 | 6.398929e-70 | -8.615850e-47 |
Msa0587250 | Msa0887100 | 0.851523 | 8.398657e-61 | -8.615850e-47 |
Msa0597700 | Msa0887100 | -0.805814 | 1.113108e-49 | -8.615850e-47 |
Msa0862230 | Msa0887100 | 0.821510 | 3.886593e-53 | -8.615850e-47 |
Msa0864730 | Msa0887100 | 0.833633 | 4.767029e-56 | -8.615850e-47 |
Msa0864750 | Msa0887100 | 0.834154 | 3.530914e-56 | -8.615850e-47 |
Msa0868610 | Msa0887100 | -0.800446 | 1.435549e-48 | -8.615850e-47 |
Msa0879650 | Msa0887100 | 0.883637 | 3.789677e-71 | -8.615850e-47 |
Msa0887100 | Msa0892020 | 0.809506 | 1.829719e-50 | -8.615850e-47 |
Msa0887100 | Msa0901820 | -0.811172 | 7.997335e-51 | -8.615850e-47 |
Msa0887100 | Msa0909720 | 0.806296 | 8.812449e-50 | -8.615850e-47 |
Msa0887100 | Msa0912110 | 0.836090 | 1.147454e-56 | -8.615850e-47 |
Msa0887100 | Msa0913140 | 0.947352 | 7.953433e-106 | -8.615850e-47 |
Msa0887100 | Msa0925630 | 0.823947 | 1.052924e-53 | -8.615850e-47 |
Msa0887100 | Msa0928940 | 0.826893 | 2.112793e-54 | -8.615850e-47 |
Msa0887100 | Msa0930210 | -0.865406 | 6.043531e-65 | -8.615850e-47 |
Msa0887100 | Msa0931550 | 0.810211 | 1.289958e-50 | -8.615850e-47 |
Msa0887100 | Msa0932140 | -0.820688 | 6.009789e-53 | -8.615850e-47 |
Msa0887100 | Msa0932150 | -0.826596 | 2.487283e-54 | -8.615850e-47 |
Msa0887100 | Msa0950470 | 0.918012 | 2.631909e-86 | -8.615850e-47 |
Msa0887100 | Msa0950570 | 0.925713 | 1.263077e-90 | -8.615850e-47 |
Msa0887100 | Msa0956910 | 0.845114 | 4.969787e-59 | -8.615850e-47 |
Msa0887100 | Msa0967780 | -0.801242 | 9.875164e-49 | -8.615850e-47 |
Msa0887100 | Msa0967900 | 0.828230 | 1.008822e-54 | -8.615850e-47 |
Msa0887100 | Msa0970270 | -0.824427 | 8.119284e-54 | -8.615850e-47 |
Msa0887100 | Msa0975440 | 0.800690 | 1.280673e-48 | -8.615850e-47 |
Msa0887100 | Msa0975550 | 0.813064 | 3.091797e-51 | -8.615850e-47 |
Msa0887100 | Msa0978290 | 0.801387 | 9.221289e-49 | -8.615850e-47 |
Msa0887100 | Msa0980980 | 0.807773 | 4.290865e-50 | -8.615850e-47 |
Msa0887100 | Msa0984000 | 0.820163 | 7.930923e-53 | -8.615850e-47 |
Msa0887100 | Msa0992190 | 0.828309 | 9.656551e-55 | -8.615850e-47 |
Msa0887100 | Msa0999590 | 0.819939 | 8.926149e-53 | -8.615850e-47 |
Msa0887100 | Msa1004720 | 0.823991 | 1.028048e-53 | -8.615850e-47 |
Msa0887100 | Msa1010470 | 0.823311 | 1.483289e-53 | -8.615850e-47 |
Msa0887100 | Msa1014700 | 0.815665 | 8.228316e-52 | -8.615850e-47 |
Msa0887100 | Msa1024570 | -0.812704 | 3.707598e-51 | -8.615850e-47 |
Msa0887100 | Msa1029820 | -0.808676 | 2.754807e-50 | -8.615850e-47 |
Msa0887100 | Msa1031180 | -0.829188 | 5.919868e-55 | -8.615850e-47 |
Msa0887100 | Msa1031530 | 0.828462 | 8.868967e-55 | -8.615850e-47 |
Msa0887100 | Msa1032740 | -0.826202 | 3.087746e-54 | -8.615850e-47 |
Msa0887100 | Msa1036020 | -0.825197 | 5.343988e-54 | -8.615850e-47 |
Msa0887100 | Msa1042130 | -0.819749 | 9.863453e-53 | -8.615850e-47 |
Msa0887100 | Msa1043020 | 0.818797 | 1.624657e-52 | -8.615850e-47 |
Msa0887100 | Msa1052030 | 0.830665 | 2.583963e-55 | -8.615850e-47 |
Msa0887100 | Msa1057620 | 0.805719 | 1.165365e-49 | -8.615850e-47 |
Msa0887100 | Msa1068940 | -0.803576 | 3.262968e-49 | -8.615850e-47 |
Msa0887100 | Msa1070360 | -0.828973 | 6.674981e-55 | -8.615850e-47 |
Msa0887100 | Msa1070630 | 0.838356 | 3.019982e-57 | -8.615850e-47 |
Msa0887100 | Msa1071640 | 0.804556 | 2.041642e-49 | -8.615850e-47 |
Msa0887100 | Msa1076280 | -0.843918 | 1.042332e-58 | -8.615850e-47 |
Msa0887100 | Msa1078300 | -0.821791 | 3.345269e-53 | -8.615850e-47 |
Msa0887100 | Msa1078590 | 0.801900 | 7.240068e-49 | -8.615850e-47 |
Msa0887100 | Msa1078600 | 0.826176 | 3.131276e-54 | -8.615850e-47 |
Msa0887100 | Msa1078760 | 0.807015 | 6.211593e-50 | -8.615850e-47 |
Msa0887100 | Msa1078770 | 0.826022 | 3.407983e-54 | -8.615850e-47 |
Msa0887100 | Msa1082150 | 0.800286 | 1.547837e-48 | -8.615850e-47 |
Msa0887100 | Msa1083130 | -0.808720 | 2.695647e-50 | -8.615850e-47 |
Msa0887100 | Msa1088740 | 0.845808 | 3.224118e-59 | -8.615850e-47 |
Msa0887100 | Msa1096510 | 0.817533 | 3.139471e-52 | -8.615850e-47 |
Msa0887100 | Msa1096520 | 0.829193 | 5.901984e-55 | -8.615850e-47 |
Msa0887100 | Msa1096570 | 0.843565 | 1.296026e-58 | -8.615850e-47 |
Msa0887100 | Msa1101300 | 0.831222 | 1.886045e-55 | -8.615850e-47 |
Msa0887100 | Msa1109500 | 0.805547 | 1.266175e-49 | -8.615850e-47 |
Msa0887100 | Msa1119430 | -0.831269 | 1.836523e-55 | -8.615850e-47 |
Msa0887100 | Msa1122550 | -0.805130 | 1.548868e-49 | -8.615850e-47 |
Msa0887100 | Msa1122720 | 0.808591 | 2.873072e-50 | -8.615850e-47 |
Msa0887100 | Msa1124880 | -0.811002 | 8.704485e-51 | -8.615850e-47 |
Msa0887100 | Msa1125450 | 0.822343 | 2.492433e-53 | -8.615850e-47 |
Msa0887100 | Msa1127910 | -0.805433 | 1.337935e-49 | -8.615850e-47 |
Msa0887100 | Msa1133440 | 0.848133 | 7.439894e-60 | -8.615850e-47 |
Msa0887100 | Msa1140480 | 0.814529 | 1.470984e-51 | -8.615850e-47 |
Msa0887100 | Msa1143860 | 0.835170 | 1.961396e-56 | -8.615850e-47 |
Msa0887100 | Msa1144730 | 0.814316 | 1.639465e-51 | -8.615850e-47 |
Msa0887100 | Msa1152290 | -0.800201 | 1.610528e-48 | -8.615850e-47 |
Msa0887100 | Msa1158450 | 0.844406 | 7.710841e-59 | -8.615850e-47 |
Msa0887100 | Msa1163340 | -0.809540 | 1.799229e-50 | -8.615850e-47 |
Msa0887100 | Msa1164570 | 0.827033 | 1.956477e-54 | -8.615850e-47 |
Msa0887100 | Msa1167500 | -0.804482 | 2.114837e-49 | -8.615850e-47 |
Msa0887100 | Msa1169600 | 0.819491 | 1.129597e-52 | -8.615850e-47 |
Msa0887100 | Msa1173380 | 0.848683 | 5.243507e-60 | -8.615850e-47 |
Msa0887100 | Msa1181730 | 0.816986 | 4.166684e-52 | -8.615850e-47 |
Msa0887100 | Msa1182800 | 0.812712 | 3.693492e-51 | -8.615850e-47 |
Msa0887100 | Msa1184010 | 0.827760 | 1.309693e-54 | -8.615850e-47 |
Msa0887100 | Msa1190350 | 0.847574 | 1.060722e-59 | -8.615850e-47 |
Msa0887100 | Msa1191960 | 0.813225 | 2.851450e-51 | -8.615850e-47 |
Msa0887100 | Msa1193430 | 0.801507 | 8.715501e-49 | -8.615850e-47 |
Msa0887100 | Msa1205270 | 0.835042 | 2.112132e-56 | -8.615850e-47 |
Msa0887100 | Msa1206220 | -0.810515 | 1.109356e-50 | -8.615850e-47 |
Msa0887100 | Msa1209160 | 0.902490 | 9.196217e-79 | -8.615850e-47 |
Msa0887100 | Msa1217890 | -0.801981 | 6.965161e-49 | -8.615850e-47 |
Msa0887100 | Msa1219060 | 0.857902 | 1.188968e-62 | -8.615850e-47 |
Msa0887100 | Msa1219540 | -0.810698 | 1.012599e-50 | -8.615850e-47 |
Msa0887100 | Msa1224820 | 0.859033 | 5.470834e-63 | -8.615850e-47 |
Msa0887100 | Msa1225140 | 0.834387 | 3.087056e-56 | -8.615850e-47 |
Msa0887100 | Msa1228350 | 0.825967 | 3.510626e-54 | -8.615850e-47 |
Msa0887100 | Msa1228460 | 0.843039 | 1.790284e-58 | -8.615850e-47 |
Msa0887100 | Msa1236860 | 0.911566 | 5.261044e-83 | -8.615850e-47 |
Msa0887100 | Msa1237970 | 0.807672 | 4.508676e-50 | -8.615850e-47 |
Msa0887100 | Msa1243630 | 0.829718 | 4.401683e-55 | -8.615850e-47 |
Msa0887100 | Msa1243730 | 0.801468 | 8.876286e-49 | -8.615850e-47 |
Msa0887100 | Msa1244220 | 0.829707 | 4.426712e-55 | -8.615850e-47 |
Msa0887100 | Msa1249410 | 0.803267 | 3.782176e-49 | -8.615850e-47 |
Msa0887100 | Msa1255020 | 0.884385 | 2.005834e-71 | -8.615850e-47 |
Msa0887100 | Msa1255030 | 0.822769 | 1.983959e-53 | -8.615850e-47 |
Msa0887100 | Msa1266120 | 0.811006 | 8.688027e-51 | -8.615850e-47 |
Msa0887100 | Msa1286860 | 0.831140 | 1.975513e-55 | -8.615850e-47 |
Msa0887100 | Msa1295470 | 0.883174 | 5.609955e-71 | -8.615850e-47 |
Msa0887100 | Msa1297220 | 0.876737 | 1.100686e-68 | -8.615850e-47 |
Msa0887100 | Msa1303760 | 0.886188 | 4.250509e-72 | -8.615850e-47 |
Msa0887100 | Msa1303820 | 0.883668 | 3.693457e-71 | -8.615850e-47 |
Msa0887100 | Msa1315760 | -0.812101 | 5.022001e-51 | -8.615850e-47 |
Msa0887100 | Msa1317240 | 0.908294 | 1.999746e-81 | -8.615850e-47 |
Msa0887100 | Msa1323260 | 0.861993 | 6.943213e-64 | -8.615850e-47 |
Msa0887100 | Msa1332690 | 0.849480 | 3.146708e-60 | -8.615850e-47 |
Msa0887100 | Msa1333210 | -0.814009 | 1.915733e-51 | -8.615850e-47 |
Msa0887100 | Msa1342360 | 0.809872 | 1.526854e-50 | -8.615850e-47 |
Msa0887100 | Msa1343450 | 0.874673 | 5.620382e-68 | -8.615850e-47 |
Msa0887100 | Msa1348330 | -0.813344 | 2.683947e-51 | -8.615850e-47 |
Msa0887100 | Msa1349810 | 0.826297 | 2.931429e-54 | -8.615850e-47 |
Msa0887100 | Msa1350580 | 0.812040 | 5.177649e-51 | -8.615850e-47 |
Msa0887100 | Msa1359890 | 0.851261 | 9.957529e-61 | -8.615850e-47 |
Msa0887100 | Msa1363070 | 0.886724 | 2.665198e-72 | -8.615850e-47 |
Msa0887100 | Msa1369180 | 0.870071 | 1.924226e-66 | -8.615850e-47 |
Msa0887100 | Msa1373390 | 0.835779 | 1.375755e-56 | -8.615850e-47 |
Msa0887100 | Msa1376010 | 0.834410 | 3.046700e-56 | -8.615850e-47 |
Msa0887100 | Msa1379270 | 0.807798 | 4.238423e-50 | -8.615850e-47 |
Msa0887100 | Msa1382750 | 0.836140 | 1.114144e-56 | -8.615850e-47 |
Msa0887100 | Msa1384620 | 0.823102 | 1.659648e-53 | -8.615850e-47 |
Msa0887100 | Msa1386250 | 0.821994 | 3.003174e-53 | -8.615850e-47 |
Msa0887100 | Msa1404690 | 0.823690 | 1.209382e-53 | -8.615850e-47 |
Msa0887100 | Msa1405380 | 0.829240 | 5.751433e-55 | -8.615850e-47 |
Msa0887100 | Msa1406020 | 0.807284 | 5.449698e-50 | -8.615850e-47 |
Msa0887100 | Msa1408860 | 0.831596 | 1.525998e-55 | -8.615850e-47 |
Msa0887100 | Msa1412500 | -0.802963 | 4.371026e-49 | -8.615850e-47 |
Msa0887100 | Msa1413020 | -0.802890 | 4.526829e-49 | -8.615850e-47 |
Msa0887100 | Msa1414780 | 0.813517 | 2.458609e-51 | -8.615850e-47 |
Msa0887100 | Msa1418840 | 0.833823 | 4.272681e-56 | -8.615850e-47 |
Msa0887100 | Msa1421540 | -0.819018 | 1.447613e-52 | -8.615850e-47 |
Msa0887100 | Msa1431240 | 0.810314 | 1.225744e-50 | -8.615850e-47 |
Msa0887100 | Msa1436660 | 0.833060 | 6.623473e-56 | -8.615850e-47 |
Msa0887100 | Msa1443550 | 0.808908 | 2.458000e-50 | -8.615850e-47 |
Msa0887100 | Msa1450630 | 0.850864 | 1.288674e-60 | -8.615850e-47 |
Msa0887100 | Msa1450780 | 0.853321 | 2.581938e-61 | -8.615850e-47 |
Msa0887100 | Msa1452560 | 0.809837 | 1.552921e-50 | -8.615850e-47 |
Msa0887100 | Msa1456620 | 0.851006 | 1.175516e-60 | -8.615850e-47 |
Msa0887100 | Msa1460530 | 0.825497 | 4.538753e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0887100 | MtrunA17_Chr6g0466691 | 88.148 | 270 | 16 | 2 | 1 | 270 | 1 | 254 | 8.67e-168 | 464 |
Msa0887100 | MtrunA17_Chr2g0316751 | 52.709 | 203 | 88 | 3 | 75 | 270 | 70 | 271 | 2.58e-64 | 202 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0887100 | AT3G15110.1 | 42.066 | 271 | 138 | 6 | 8 | 268 | 5 | 266 | 3.92e-58 | 186 |
Find 52 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGGTTTGTTGCTTTATTC+TGG | 0.170230 | 6_1:-48135810 | Msa0887100:CDS |
GGAGGTTTGTGAAGAGAAAT+TGG | 0.266914 | 6_1:+48138806 | None:intergenic |
GAATAGCACAAAAGGACTTA+TGG | 0.287634 | 6_1:-48137591 | Msa0887100:CDS |
TACTTCTTGAGAAGGATTAA+TGG | 0.287749 | 6_1:+48138687 | None:intergenic |
TGGTGTGTGGTGATTGAAAT+AGG | 0.300930 | 6_1:+48138784 | None:intergenic |
AGAAATTATCTGAAATTGTT+TGG | 0.312877 | 6_1:+48137441 | None:intergenic |
CACTTCAGAACGGTAATAAA+TGG | 0.313115 | 6_1:-48135873 | Msa0887100:intron |
ATTTGTGGAAATTATTATAA+TGG | 0.320700 | 6_1:+48138737 | None:intergenic |
ACCTTATGGTGATTGTTATC+TGG | 0.328009 | 6_1:+48135982 | None:intergenic |
AAACATTATGCTCATGTATA+AGG | 0.330276 | 6_1:+48135575 | None:intergenic |
GTGTATGGAATAAACTCTTT+TGG | 0.353719 | 6_1:-48135828 | Msa0887100:CDS |
ACTTGATGACCCTTTCTCAT+AGG | 0.363596 | 6_1:+48135770 | None:intergenic |
AACAATTTCAGATAATTTCT+CGG | 0.364342 | 6_1:-48137438 | Msa0887100:intron |
TTTGATCCTGCGCTGGATAG+TGG | 0.365094 | 6_1:+48138528 | None:intergenic |
GCTCCTAACAATGCTTTATC+TGG | 0.378868 | 6_1:+48137533 | None:intergenic |
TCACCAGATAAAGCATTGTT+AGG | 0.382378 | 6_1:-48137536 | Msa0887100:CDS |
ATTGTGTTAATATTAAATTA+TGG | 0.391333 | 6_1:+48135510 | None:intergenic |
AATAGCACAAAAGGACTTAT+GGG | 0.391794 | 6_1:-48137590 | Msa0887100:CDS |
GAGGATTAATTGTGGATTTG+TGG | 0.395724 | 6_1:+48138722 | None:intergenic |
GGACAACACTGATGGTTACT+TGG | 0.403683 | 6_1:+48138581 | None:intergenic |
AGCATTGTTAGGAGCAGTTA+TGG | 0.422251 | 6_1:-48137525 | Msa0887100:CDS |
TAAACTAACCACTGCAAAAG+TGG | 0.428450 | 6_1:-48138647 | Msa0887100:CDS |
GAAAACTGAAAGCAAAATCA+TGG | 0.462629 | 6_1:-48135742 | Msa0887100:CDS |
CATGTAGCAGTAGCAACTAT+TGG | 0.465797 | 6_1:+48135626 | None:intergenic |
GCACTCAACACCTATGAGAA+AGG | 0.482727 | 6_1:-48135780 | Msa0887100:CDS |
TCATCATTGAATAGCACAAA+AGG | 0.490794 | 6_1:-48137599 | Msa0887100:CDS |
GATCAAAAGAGCAAAACAAT+TGG | 0.495344 | 6_1:-48138512 | Msa0887100:intron |
GTAAGTGAGAGTGCAACATT+TGG | 0.507865 | 6_1:+48138839 | None:intergenic |
TGAAGAGAAATTGGTGATTG+TGG | 0.522068 | 6_1:+48138815 | None:intergenic |
CACTCAACACCTATGAGAAA+GGG | 0.529960 | 6_1:-48135779 | Msa0887100:CDS |
ATTAAAGATACAACAAGTGA+AGG | 0.532915 | 6_1:+48138870 | None:intergenic |
TTGTTAGGAGCAGTTATGGC+TGG | 0.532963 | 6_1:-48137521 | Msa0887100:CDS |
TTGATCCTGCGCTGGATAGT+GGG | 0.548692 | 6_1:+48138529 | None:intergenic |
GTGGTTAGTTTATTTAGCAA+CGG | 0.549937 | 6_1:+48138658 | None:intergenic |
TACCTAGCTACATTTGTGTA+TGG | 0.551091 | 6_1:-48135843 | Msa0887100:CDS |
GCCAGATAACAATCACCATA+AGG | 0.551485 | 6_1:-48135983 | Msa0887100:intron |
AACAATGCTTTATCTGGTGA+AGG | 0.551642 | 6_1:+48137539 | None:intergenic |
GGTGTGTGGTGATTGAAATA+GGG | 0.567014 | 6_1:+48138785 | None:intergenic |
AATGCTTTATCTGGTGAAGG+TGG | 0.571857 | 6_1:+48137542 | None:intergenic |
CATAGGTGTTGAGTGCAAGT+TGG | 0.575800 | 6_1:+48135787 | None:intergenic |
TTAATGGCTGAAACAGTATG+AGG | 0.581022 | 6_1:+48138703 | None:intergenic |
TTAAAGATACAACAAGTGAA+GGG | 0.588344 | 6_1:+48138871 | None:intergenic |
TTCCATACACAAATGTAGCT+AGG | 0.589997 | 6_1:+48135841 | None:intergenic |
AACAGTATGAGGATTAATTG+TGG | 0.592702 | 6_1:+48138714 | None:intergenic |
TCTTTCCCACTATCCAGCGC+AGG | 0.592749 | 6_1:-48138534 | Msa0887100:CDS |
TATGAGAAAGGGTCATCAAG+TGG | 0.593728 | 6_1:-48135768 | Msa0887100:CDS |
GAACAATACAGCAATAGCTA+CGG | 0.610277 | 6_1:+48138555 | None:intergenic |
AAATTATTATAATGGAGAAG+TGG | 0.628122 | 6_1:+48138745 | None:intergenic |
TACGGAGAGGACAACACTGA+TGG | 0.632376 | 6_1:+48138573 | None:intergenic |
GTGTGGTGATTGAAATAGGG+AGG | 0.635700 | 6_1:+48138788 | None:intergenic |
TAGTTGCTACTGCTACATGT+TGG | 0.654974 | 6_1:-48135622 | Msa0887100:three_prime_UTR |
ATACAGCAATAGCTACGGAG+AGG | 0.739717 | 6_1:+48138560 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAATTTTTTCTCTTTTTAT+TGG | - | chr6_1:48135985-48136004 | Msa0887100:CDS | 10.0% |
!!! | ATGTTTTGAATAAATTTTTA+AGG | - | chr6_1:48136147-48136166 | Msa0887100:intron | 10.0% |
!!! | TGTTTTGAATAAATTTTTAA+GGG | - | chr6_1:48136148-48136167 | Msa0887100:intron | 10.0% |
!!! | TTTTTTTTTTTTTTTGGTAA+AGG | + | chr6_1:48136475-48136494 | None:intergenic | 10.0% |
!! | ACCAAAAAAAAAAAAAAAAT+TGG | - | chr6_1:48136477-48136496 | Msa0887100:intron | 10.0% |
!!! | ACCAATTTTTTTTTTTTTTT+TGG | + | chr6_1:48136481-48136500 | None:intergenic | 10.0% |
!!! | TATTTTAAAAGTAATAACAA+CGG | + | chr6_1:48137676-48137695 | None:intergenic | 10.0% |
!!! | TTGTTATTACTTTTAAAATA+GGG | - | chr6_1:48137676-48137695 | Msa0887100:intron | 10.0% |
!!! | TTACAAAGTTATATTTTAAA+GGG | + | chr6_1:48138237-48138256 | None:intergenic | 10.0% |
!!! | TTTACAAAGTTATATTTTAA+AGG | + | chr6_1:48138238-48138257 | None:intergenic | 10.0% |
!! | ATTGTGTTAATATTAAATTA+TGG | + | chr6_1:48138888-48138907 | None:intergenic | 10.0% |
!! | ATTTGTGGAAATTATTATAA+TGG | + | chr6_1:48135661-48135680 | None:intergenic | 15.0% |
!!! | ATTAGATTTAATTGTAGTTT+TGG | - | chr6_1:48136035-48136054 | Msa0887100:intron | 15.0% |
!!! | GTTTTGAATAAATTTTTAAG+GGG | - | chr6_1:48136149-48136168 | Msa0887100:intron | 15.0% |
!!! | TTTTGAATAAATTTTTAAGG+GGG | - | chr6_1:48136150-48136169 | Msa0887100:intron | 15.0% |
!! | TAACTATTCATTCATAAAAA+AGG | + | chr6_1:48137009-48137028 | None:intergenic | 15.0% |
!!! | GTTGTTATTACTTTTAAAAT+AGG | - | chr6_1:48137675-48137694 | Msa0887100:intron | 15.0% |
!! | AATGCTATTAAAATTAAGTA+AGG | + | chr6_1:48138163-48138182 | None:intergenic | 15.0% |
!! | AGATAAAAAGTAATAAAATC+TGG | + | chr6_1:48137942-48137961 | None:intergenic | 15.0% |
!! | TTCAAAAATTTAAGAGTTTA+AGG | - | chr6_1:48138073-48138092 | Msa0887100:intron | 15.0% |
!! | AATGCTATTAAAATTAAGTA+AGG | - | chr6_1:48138163-48138182 | Msa0887100:intron | 15.0% |
!! | ATAATATTCTTTCATCTTAA+TGG | - | chr6_1:48138325-48138344 | Msa0887100:intron | 15.0% |
!! | CATAAAAAATGAAAACATTA+AGG | + | chr6_1:48138467-48138486 | None:intergenic | 15.0% |
!!! | AAATTATTATAATGGAGAAG+TGG | + | chr6_1:48135653-48135672 | None:intergenic | 20.0% |
!! | TATTGGAAAAATTTATTGAG+TGG | - | chr6_1:48136002-48136021 | Msa0887100:intron | 20.0% |
!! | TTCAAAATGATGAAAATATG+AGG | - | chr6_1:48136301-48136320 | Msa0887100:intron | 20.0% |
!! | GAATATTGCTAGTAATATTT+AGG | + | chr6_1:48136345-48136364 | None:intergenic | 20.0% |
!!! | TCTTATTTGGTAAATTTATG+TGG | - | chr6_1:48136394-48136413 | Msa0887100:intron | 20.0% |
!!! | AATTAATTTTGTACATTCTC+AGG | - | chr6_1:48136558-48136577 | Msa0887100:intron | 20.0% |
!! | TTATTCAAAGAATATGTATG+TGG | + | chr6_1:48136654-48136673 | None:intergenic | 20.0% |
!! | TTTCATCAAAGAATATTATG+TGG | + | chr6_1:48136732-48136751 | None:intergenic | 20.0% |
!! | CATAATATTCTTTGATGAAA+TGG | - | chr6_1:48136732-48136751 | Msa0887100:intron | 20.0% |
!!! | ATTGGTGATTTTAGAAATAT+AGG | - | chr6_1:48136755-48136774 | Msa0887100:intron | 20.0% |
!!! | AGAAATTATCTGAAATTGTT+TGG | + | chr6_1:48136957-48136976 | None:intergenic | 20.0% |
!! | AACAATTTCAGATAATTTCT+CGG | - | chr6_1:48136957-48136976 | Msa0887100:intron | 20.0% |
!!! | AATGTGTTTATTTTATCTCT+AGG | - | chr6_1:48137122-48137141 | Msa0887100:intron | 20.0% |
!!! | ATGTGTTTATTTTATCTCTA+GGG | - | chr6_1:48137123-48137142 | Msa0887100:intron | 20.0% |
!! | AAACAAATTTGAATTGAGTA+GGG | + | chr6_1:48137812-48137831 | None:intergenic | 20.0% |
!! | TAAACAAATTTGAATTGAGT+AGG | + | chr6_1:48137813-48137832 | None:intergenic | 20.0% |
!!! | ACTTATTTGAGATAAGTTTA+GGG | + | chr6_1:48138444-48138463 | None:intergenic | 20.0% |
! | TTAAAGATACAACAAGTGAA+GGG | + | chr6_1:48135527-48135546 | None:intergenic | 25.0% |
! | ATTAAAGATACAACAAGTGA+AGG | + | chr6_1:48135528-48135547 | None:intergenic | 25.0% |
! | TCATCTATAGCATCAAAAAT+GGG | + | chr6_1:48135782-48135801 | None:intergenic | 25.0% |
! | GTGTAGTTACTAAAAATTTC+TGG | - | chr6_1:48135940-48135959 | Msa0887100:intron | 25.0% |
!! | CACATATTTTCACCATTTTA+TGG | - | chr6_1:48136060-48136079 | Msa0887100:intron | 25.0% |
! | TGATAGGTAAATATCAACAT+TGG | + | chr6_1:48136192-48136211 | None:intergenic | 25.0% |
! | GCAATATATGATATGATGAT+AGG | + | chr6_1:48136208-48136227 | None:intergenic | 25.0% |
! | CATGAAAGTTTAAAAATGTG+GGG | + | chr6_1:48136422-48136441 | None:intergenic | 25.0% |
! | GCATGAAAGTTTAAAAATGT+GGG | + | chr6_1:48136423-48136442 | None:intergenic | 25.0% |
! | ATACATCAATACATGATCAA+GGG | + | chr6_1:48136445-48136464 | None:intergenic | 25.0% |
! | AATACATCAATACATGATCA+AGG | + | chr6_1:48136446-48136465 | None:intergenic | 25.0% |
! | TATTCTTTGATGAAATGGAT+TGG | - | chr6_1:48136737-48136756 | Msa0887100:intron | 25.0% |
!!! | TTTTAGAAATATAGGTCTTC+TGG | - | chr6_1:48136763-48136782 | Msa0887100:intron | 25.0% |
!!! | ACATTAAAAGTGTCAACAAA+GGG | + | chr6_1:48137089-48137108 | None:intergenic | 25.0% |
!!! | CACTTTTAATGTCATTTCAT+TGG | - | chr6_1:48137097-48137116 | Msa0887100:intron | 25.0% |
! | TAGTATGAGAATGTATTGAA+TGG | - | chr6_1:48137317-48137336 | Msa0887100:intron | 25.0% |
! | CTATCCTTAGTTGTATAAAT+AGG | + | chr6_1:48137379-48137398 | None:intergenic | 25.0% |
! | CATTGTAGTGCATTTATATT+CGG | - | chr6_1:48137463-48137482 | Msa0887100:CDS | 25.0% |
!! | GAAAATTATGTGTTCTAGAT+TGG | + | chr6_1:48137569-48137588 | None:intergenic | 25.0% |
!!! | TATAAGGTCGCTATTTTATA+GGG | + | chr6_1:48137719-48137738 | None:intergenic | 25.0% |
!!! | TTATAAGGTCGCTATTTTAT+AGG | + | chr6_1:48137720-48137739 | None:intergenic | 25.0% |
! | AAGTAAGGACTAAACTTATA+AGG | + | chr6_1:48137735-48137754 | None:intergenic | 25.0% |
! | AGTGCAGAAAAACAAAATTA+GGG | + | chr6_1:48137779-48137798 | None:intergenic | 25.0% |
!! | GACTTATTTGAGATAAGTTT+AGG | + | chr6_1:48138445-48138464 | None:intergenic | 25.0% |
!!! | CTACATGTTGGTTTTTTAAT+AGG | - | chr6_1:48138785-48138804 | Msa0887100:CDS | 25.0% |
! | AAACATTATGCTCATGTATA+AGG | + | chr6_1:48138823-48138842 | None:intergenic | 25.0% |
TAATGAAGAAAAATGGTGTG+TGG | + | chr6_1:48135627-48135646 | None:intergenic | 30.0% | |
GTGGAGATAATGAAGAAAAA+TGG | + | chr6_1:48135634-48135653 | None:intergenic | 30.0% | |
AACAGTATGAGGATTAATTG+TGG | + | chr6_1:48135684-48135703 | None:intergenic | 30.0% | |
TACTTCTTGAGAAGGATTAA+TGG | + | chr6_1:48135711-48135730 | None:intergenic | 30.0% | |
GGTAAAAATACTTCTTGAGA+AGG | + | chr6_1:48135719-48135738 | None:intergenic | 30.0% | |
!! | GTGGTTAGTTTATTTAGCAA+CGG | + | chr6_1:48135740-48135759 | None:intergenic | 30.0% |
CATCTATAGCATCAAAAATG+GGG | + | chr6_1:48135781-48135800 | None:intergenic | 30.0% | |
GTCATCTATAGCATCAAAAA+TGG | + | chr6_1:48135783-48135802 | None:intergenic | 30.0% | |
GATCAAAAGAGCAAAACAAT+TGG | - | chr6_1:48135883-48135902 | Msa0887100:intron | 30.0% | |
AACTACACATAAATTGCTTG+AGG | + | chr6_1:48135928-48135947 | None:intergenic | 30.0% | |
GGATGATCAATTCCATAAAA+TGG | + | chr6_1:48136075-48136094 | None:intergenic | 30.0% | |
! | TTTTAATCCAGCCATCAAAT+AGG | - | chr6_1:48136115-48136134 | Msa0887100:intron | 30.0% |
ATGCATATCATCCTATTTGA+TGG | + | chr6_1:48136129-48136148 | None:intergenic | 30.0% | |
GGCATGAAAGTTTAAAAATG+TGG | + | chr6_1:48136424-48136443 | None:intergenic | 30.0% | |
! | GGTAGATATTTTACTGAAAG+TGG | - | chr6_1:48136498-48136517 | Msa0887100:intron | 30.0% |
CCTTTGTATATCATCTAAAG+AGG | + | chr6_1:48136682-48136701 | None:intergenic | 30.0% | |
CCTCTTTAGATGATATACAA+AGG | - | chr6_1:48136679-48136698 | Msa0887100:intron | 30.0% | |
TCATCATTGAATAGCACAAA+AGG | - | chr6_1:48136796-48136815 | Msa0887100:intron | 30.0% | |
AATAGCACAAAAGGACTTAT+GGG | - | chr6_1:48136805-48136824 | Msa0887100:intron | 30.0% | |
CCTCATATGAACATAAACAA+TGG | + | chr6_1:48137051-48137070 | None:intergenic | 30.0% | |
CCATTGTTTATGTTCATATG+AGG | - | chr6_1:48137048-48137067 | Msa0887100:intron | 30.0% | |
!! | GACATTAAAAGTGTCAACAA+AGG | + | chr6_1:48137090-48137109 | None:intergenic | 30.0% |
! | TATCTCTAGGGAGAAAAATT+AGG | - | chr6_1:48137135-48137154 | Msa0887100:intron | 30.0% |
TTTCTTTGATATGTCTCCAT+AGG | - | chr6_1:48137163-48137182 | Msa0887100:intron | 30.0% | |
! | ATGGATTAAAGGGAATCATA+GGG | + | chr6_1:48137202-48137221 | None:intergenic | 30.0% |
! | TATGGATTAAAGGGAATCAT+AGG | + | chr6_1:48137203-48137222 | None:intergenic | 30.0% |
! | CCATGTCATTATGGATTAAA+GGG | + | chr6_1:48137212-48137231 | None:intergenic | 30.0% |
CCTTTAATCCATAATGACAT+GGG | - | chr6_1:48137210-48137229 | Msa0887100:intron | 30.0% | |
CTTTAATCCATAATGACATG+GGG | - | chr6_1:48137211-48137230 | Msa0887100:intron | 30.0% | |
TAGTTGTATAAATAGGTCCT+AGG | + | chr6_1:48137372-48137391 | None:intergenic | 30.0% | |
AGGACCTATTTATACAACTA+AGG | - | chr6_1:48137372-48137391 | Msa0887100:intron | 30.0% | |
TGTGATAAATCTTCTGTGTT+CGG | - | chr6_1:48137512-48137531 | Msa0887100:CDS | 30.0% | |
! | TGCATTTTCTTAAGTGCTTT+TGG | + | chr6_1:48137641-48137660 | None:intergenic | 30.0% |
CACTTAAGAAAATGCACATA+AGG | - | chr6_1:48137645-48137664 | Msa0887100:intron | 30.0% | |
CAGTGCAGAAAAACAAAATT+AGG | + | chr6_1:48137780-48137799 | None:intergenic | 30.0% | |
CAAGATTAGAACACTATGAA+AGG | + | chr6_1:48138039-48138058 | None:intergenic | 30.0% | |
AAGTAAGGACTAAACTTACA+AGG | - | chr6_1:48138178-48138197 | Msa0887100:intron | 30.0% | |
!! | TTACAAGGTCGCTATTTTAT+AGG | - | chr6_1:48138193-48138212 | Msa0887100:intron | 30.0% |
!! | TACAAGGTCGCTATTTTATA+GGG | - | chr6_1:48138194-48138213 | Msa0887100:intron | 30.0% |
! | ATTTGAGATAAGTTTAGGGA+AGG | + | chr6_1:48138440-48138459 | None:intergenic | 30.0% |
!! | ATTTATTACCGTTCTGAAGT+GGG | + | chr6_1:48138523-48138542 | None:intergenic | 30.0% |
! | GTGTATGGAATAAACTCTTT+TGG | - | chr6_1:48138567-48138586 | Msa0887100:CDS | 30.0% |
!! | TTTGGTTTGTTGCTTTATTC+TGG | - | chr6_1:48138585-48138604 | Msa0887100:CDS | 30.0% |
GAAAACTGAAAGCAAAATCA+TGG | - | chr6_1:48138653-48138672 | Msa0887100:CDS | 30.0% | |
! | TGAAGAGAAATTGGTGATTG+TGG | + | chr6_1:48135583-48135602 | None:intergenic | 35.0% |
GAGGATTAATTGTGGATTTG+TGG | + | chr6_1:48135676-48135695 | None:intergenic | 35.0% | |
TTAATGGCTGAAACAGTATG+AGG | + | chr6_1:48135695-48135714 | None:intergenic | 35.0% | |
TAAACTAACCACTGCAAAAG+TGG | - | chr6_1:48135748-48135767 | Msa0887100:CDS | 35.0% | |
GAACAATACAGCAATAGCTA+CGG | + | chr6_1:48135843-48135862 | None:intergenic | 35.0% | |
! | ATATCATCCTATTTGATGGC+TGG | + | chr6_1:48136125-48136144 | None:intergenic | 35.0% |
TCAACATTGGTGAAATCGTA+AGG | + | chr6_1:48136179-48136198 | None:intergenic | 35.0% | |
TCAACACATGCTCTCTTATT+TGG | - | chr6_1:48136381-48136400 | Msa0887100:intron | 35.0% | |
TGGACTCAATTGAAAATGCA+AGG | + | chr6_1:48136712-48136731 | None:intergenic | 35.0% | |
GAATAGCACAAAAGGACTTA+TGG | - | chr6_1:48136804-48136823 | Msa0887100:intron | 35.0% | |
AACAATGCTTTATCTGGTGA+AGG | + | chr6_1:48136859-48136878 | None:intergenic | 35.0% | |
!! | TCACCAGATAAAGCATTGTT+AGG | - | chr6_1:48136859-48136878 | Msa0887100:intron | 35.0% |
AACAAAGGGTTATGGACTTA+TGG | + | chr6_1:48137075-48137094 | None:intergenic | 35.0% | |
! | AAAGTGTCAACAAAGGGTTA+TGG | + | chr6_1:48137083-48137102 | None:intergenic | 35.0% |
GGGAGTTAAGTTAAAACCTA+TGG | + | chr6_1:48137182-48137201 | None:intergenic | 35.0% | |
CCCTTTAATCCATAATGACA+TGG | - | chr6_1:48137209-48137228 | Msa0887100:intron | 35.0% | |
! | CCCATGTCATTATGGATTAA+AGG | + | chr6_1:48137213-48137232 | None:intergenic | 35.0% |
! | TCTTGATGGAATGTTGATTG+AGG | + | chr6_1:48137257-48137276 | None:intergenic | 35.0% |
ACAACTAAGGATAGAGTTGT+TGG | - | chr6_1:48137385-48137404 | Msa0887100:intron | 35.0% | |
GTGATAAATCTTCTGTGTTC+GGG | - | chr6_1:48137513-48137532 | Msa0887100:CDS | 35.0% | |
! | CTTAGCATATAGGGAGTTTT+GGG | - | chr6_1:48137536-48137555 | Msa0887100:CDS | 35.0% |
TGAATGTCTTATGCTTTCTC+AGG | - | chr6_1:48138386-48138405 | Msa0887100:intron | 35.0% | |
ACCTTATGGTGATTGTTATC+TGG | + | chr6_1:48138416-48138435 | None:intergenic | 35.0% | |
ACATTTATCCCACTTCAGAA+CGG | - | chr6_1:48138512-48138531 | Msa0887100:intron | 35.0% | |
!! | CATTTATTACCGTTCTGAAG+TGG | + | chr6_1:48138524-48138543 | None:intergenic | 35.0% |
CACTTCAGAACGGTAATAAA+TGG | - | chr6_1:48138522-48138541 | Msa0887100:CDS | 35.0% | |
TACCTAGCTACATTTGTGTA+TGG | - | chr6_1:48138552-48138571 | Msa0887100:CDS | 35.0% | |
TTCCATACACAAATGTAGCT+AGG | + | chr6_1:48138557-48138576 | None:intergenic | 35.0% | |
! | GTAAGTGAGAGTGCAACATT+TGG | + | chr6_1:48135559-48135578 | None:intergenic | 40.0% |
GGAGGTTTGTGAAGAGAAAT+TGG | + | chr6_1:48135592-48135611 | None:intergenic | 40.0% | |
GGTGTGTGGTGATTGAAATA+GGG | + | chr6_1:48135613-48135632 | None:intergenic | 40.0% | |
TGGTGTGTGGTGATTGAAAT+AGG | + | chr6_1:48135614-48135633 | None:intergenic | 40.0% | |
!! | GCTTAATTCCACTTTTGCAG+TGG | + | chr6_1:48135759-48135778 | None:intergenic | 40.0% |
AATGCTTTATCTGGTGAAGG+TGG | + | chr6_1:48136856-48136875 | None:intergenic | 40.0% | |
GCTCCTAACAATGCTTTATC+TGG | + | chr6_1:48136865-48136884 | None:intergenic | 40.0% | |
AGCATTGTTAGGAGCAGTTA+TGG | - | chr6_1:48136870-48136889 | Msa0887100:intron | 40.0% | |
ATGATCACCCCATGTCATTA+TGG | + | chr6_1:48137221-48137240 | None:intergenic | 40.0% | |
ATTCCATCAAGATGCGAGTT+GGG | - | chr6_1:48137265-48137284 | Msa0887100:intron | 40.0% | |
AGTTGTGTACCTTTGTGTTG+TGG | - | chr6_1:48137345-48137364 | Msa0887100:intron | 40.0% | |
GATTTCGACATTGATACCCA+CGG | + | chr6_1:48137437-48137456 | None:intergenic | 40.0% | |
GTGGGTATCAATGTCGAAAT+CGG | - | chr6_1:48137436-48137455 | Msa0887100:intron | 40.0% | |
AAGCAAAAGCTTGACACGAT+TGG | - | chr6_1:48137486-48137505 | Msa0887100:CDS | 40.0% | |
! | GCTTAGCATATAGGGAGTTT+TGG | - | chr6_1:48137535-48137554 | Msa0887100:CDS | 40.0% |
!!! | TATAGGGAGTTTTGGGTCTT+AGG | - | chr6_1:48137543-48137562 | Msa0887100:CDS | 40.0% |
GCCAGATAACAATCACCATA+AGG | - | chr6_1:48138412-48138431 | Msa0887100:intron | 40.0% | |
!! | AGTTTAGGGAAGGTACCTTA+TGG | + | chr6_1:48138430-48138449 | None:intergenic | 40.0% |
CACTCAACACCTATGAGAAA+GGG | - | chr6_1:48138616-48138635 | Msa0887100:CDS | 40.0% | |
! | ACTTGATGACCCTTTCTCAT+AGG | + | chr6_1:48138628-48138647 | None:intergenic | 40.0% |
TATGAGAAAGGGTCATCAAG+TGG | - | chr6_1:48138627-48138646 | Msa0887100:CDS | 40.0% | |
CATGTAGCAGTAGCAACTAT+TGG | + | chr6_1:48138772-48138791 | None:intergenic | 40.0% | |
TAGTTGCTACTGCTACATGT+TGG | - | chr6_1:48138773-48138792 | Msa0887100:CDS | 40.0% | |
GTGTGGTGATTGAAATAGGG+AGG | + | chr6_1:48135610-48135629 | None:intergenic | 45.0% | |
GGACAACACTGATGGTTACT+TGG | + | chr6_1:48135817-48135836 | None:intergenic | 45.0% | |
ATACAGCAATAGCTACGGAG+AGG | + | chr6_1:48135838-48135857 | None:intergenic | 45.0% | |
TTGTTAGGAGCAGTTATGGC+TGG | - | chr6_1:48136874-48136893 | Msa0887100:intron | 45.0% | |
ACATGGGGTGATCATTGATG+TGG | - | chr6_1:48137226-48137245 | Msa0887100:intron | 45.0% | |
CATGGGGTGATCATTGATGT+GGG | - | chr6_1:48137227-48137246 | Msa0887100:intron | 45.0% | |
! | GATGGAATGTTGATTGAGGC+AGG | + | chr6_1:48137253-48137272 | None:intergenic | 45.0% |
CATTCCATCAAGATGCGAGT+TGG | - | chr6_1:48137264-48137283 | Msa0887100:intron | 45.0% | |
ATTCCCAACTCGCATCTTGA+TGG | + | chr6_1:48137271-48137290 | None:intergenic | 45.0% | |
! | TTAAGCGTCAAAGTGTTCGC+TGG | + | chr6_1:48137295-48137314 | None:intergenic | 45.0% |
TACCTTTGTGTTGTGGTCCT+AGG | - | chr6_1:48137352-48137371 | Msa0887100:intron | 45.0% | |
TGATACCCACGGTTTGTAAC+CGG | + | chr6_1:48137426-48137445 | None:intergenic | 45.0% | |
TGTGTTCGGGCTTAGCATAT+AGG | - | chr6_1:48137526-48137545 | Msa0887100:CDS | 45.0% | |
GTGTTCGGGCTTAGCATATA+GGG | - | chr6_1:48137527-48137546 | Msa0887100:CDS | 45.0% | |
!! | CATAGGTGTTGAGTGCAAGT+TGG | + | chr6_1:48138611-48138630 | None:intergenic | 45.0% |
GCACTCAACACCTATGAGAA+AGG | - | chr6_1:48138615-48138634 | Msa0887100:CDS | 45.0% | |
!!! | ATTTACAAATTTTAAAATAT+AGG | + | chr6_1:48136096-48136115 | None:intergenic | 5.0% |
!! | AAAATAAGATAATTTATAAT+AGG | - | chr6_1:48136267-48136286 | Msa0887100:intron | 5.0% |
!!! | TATAAGTAAATTTTTTTTAT+AGG | - | chr6_1:48138133-48138152 | Msa0887100:intron | 5.0% |
!!! | ATAAGTAAATTTTTTTTATA+GGG | - | chr6_1:48138134-48138153 | Msa0887100:intron | 5.0% |
TACGGAGAGGACAACACTGA+TGG | + | chr6_1:48135825-48135844 | None:intergenic | 50.0% | |
TTGATCCTGCGCTGGATAGT+GGG | + | chr6_1:48135869-48135888 | None:intergenic | 50.0% | |
TTTGATCCTGCGCTGGATAG+TGG | + | chr6_1:48135870-48135889 | None:intergenic | 50.0% | |
! | TTGCTCTTTTGATCCTGCGC+TGG | + | chr6_1:48135877-48135896 | None:intergenic | 50.0% |
GTCCTAGGACCACAACACAA+AGG | + | chr6_1:48137357-48137376 | None:intergenic | 50.0% | |
AGTTGTTGGAGTAGTCGCTG+AGG | - | chr6_1:48137399-48137418 | Msa0887100:intron | 50.0% | |
GTTGTTGGAGTAGTCGCTGA+GGG | - | chr6_1:48137400-48137419 | Msa0887100:intron | 50.0% | |
TCTTTCCCACTATCCAGCGC+AGG | - | chr6_1:48135861-48135880 | Msa0887100:CDS | 55.0% | |
TTGGAGTAGTCGCTGAGGGC+CGG | - | chr6_1:48137404-48137423 | Msa0887100:intron | 60.0% | |
TGAGGGCCGGTTACAAACCG+TGG | - | chr6_1:48137417-48137436 | Msa0887100:intron | 60.0% | |
GAGGGCCGGTTACAAACCGT+GGG | - | chr6_1:48137418-48137437 | Msa0887100:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_1 | gene | 48135509 | 48138908 | 48135509 | ID=Msa0887100;Name=Msa0887100 |
chr6_1 | mRNA | 48135509 | 48138908 | 48135509 | ID=Msa0887100-mRNA-1;Parent=Msa0887100;Name=Msa0887100-mRNA-1;_AED=0.04;_eAED=0.04;_QI=51|1|1|1|1|1|4|147|270 |
chr6_1 | exon | 48135509 | 48135887 | 48135509 | ID=Msa0887100-mRNA-1:exon:10025;Parent=Msa0887100-mRNA-1 |
chr6_1 | exon | 48135984 | 48136009 | 48135984 | ID=Msa0887100-mRNA-1:exon:10024;Parent=Msa0887100-mRNA-1 |
chr6_1 | exon | 48137439 | 48137648 | 48137439 | ID=Msa0887100-mRNA-1:exon:10023;Parent=Msa0887100-mRNA-1 |
chr6_1 | exon | 48138513 | 48138908 | 48138513 | ID=Msa0887100-mRNA-1:exon:10022;Parent=Msa0887100-mRNA-1 |
chr6_1 | five_prime_UTR | 48138858 | 48138908 | 48138858 | ID=Msa0887100-mRNA-1:five_prime_utr;Parent=Msa0887100-mRNA-1 |
chr6_1 | CDS | 48138513 | 48138857 | 48138513 | ID=Msa0887100-mRNA-1:cds;Parent=Msa0887100-mRNA-1 |
chr6_1 | CDS | 48137439 | 48137648 | 48137439 | ID=Msa0887100-mRNA-1:cds;Parent=Msa0887100-mRNA-1 |
chr6_1 | CDS | 48135984 | 48136009 | 48135984 | ID=Msa0887100-mRNA-1:cds;Parent=Msa0887100-mRNA-1 |
chr6_1 | CDS | 48135656 | 48135887 | 48135656 | ID=Msa0887100-mRNA-1:cds;Parent=Msa0887100-mRNA-1 |
chr6_1 | three_prime_UTR | 48135509 | 48135655 | 48135509 | ID=Msa0887100-mRNA-1:three_prime_utr;Parent=Msa0887100-mRNA-1 |
Gene Sequence |
Protein sequence |