Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0275560 | XP_013462751.1 | 96.047 | 430 | 16 | 1 | 1 | 429 | 1 | 430 | 0.0 | 836 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0275560 | sp|P0DO21|GIP2_NICBE | 40.816 | 441 | 239 | 10 | 1 | 429 | 1 | 431 | 1.02e-89 | 281 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa0275560 | -0.801247 | 9.850851e-49 | -8.615850e-47 |
| Msa0027030 | Msa0275560 | -0.819998 | 8.653416e-53 | -8.615850e-47 |
| Msa0034100 | Msa0275560 | -0.843983 | 1.001410e-58 | -8.615850e-47 |
| Msa0036990 | Msa0275560 | -0.806402 | 8.370697e-50 | -8.615850e-47 |
| Msa0037180 | Msa0275560 | 0.819945 | 8.895895e-53 | -8.615850e-47 |
| Msa0050320 | Msa0275560 | -0.803191 | 3.921555e-49 | -8.615850e-47 |
| Msa0076640 | Msa0275560 | 0.845617 | 3.632699e-59 | -8.615850e-47 |
| Msa0081290 | Msa0275560 | -0.806586 | 7.656301e-50 | -8.615850e-47 |
| Msa0087130 | Msa0275560 | -0.829780 | 4.250317e-55 | -8.615850e-47 |
| Msa0089470 | Msa0275560 | -0.807835 | 4.162283e-50 | -8.615850e-47 |
| Msa0092220 | Msa0275560 | 0.823695 | 1.206090e-53 | -8.615850e-47 |
| Msa0099090 | Msa0275560 | -0.836380 | 9.679283e-57 | -8.615850e-47 |
| Msa0105590 | Msa0275560 | -0.811335 | 7.370777e-51 | -8.615850e-47 |
| Msa0120320 | Msa0275560 | -0.836044 | 1.178414e-56 | -8.615850e-47 |
| Msa0128110 | Msa0275560 | -0.832271 | 1.039436e-55 | -8.615850e-47 |
| Msa0128340 | Msa0275560 | 0.804289 | 2.320158e-49 | -8.615850e-47 |
| Msa0128740 | Msa0275560 | 0.815807 | 7.649041e-52 | -8.615850e-47 |
| Msa0131090 | Msa0275560 | -0.835972 | 1.228710e-56 | -8.615850e-47 |
| Msa0135330 | Msa0275560 | 0.813418 | 2.585896e-51 | -8.615850e-47 |
| Msa0135470 | Msa0275560 | -0.812658 | 3.794573e-51 | -8.615850e-47 |
| Msa0143280 | Msa0275560 | -0.841195 | 5.507045e-58 | -8.615850e-47 |
| Msa0146210 | Msa0275560 | 0.820457 | 6.791540e-53 | -8.615850e-47 |
| Msa0154720 | Msa0275560 | -0.802104 | 6.573461e-49 | -8.615850e-47 |
| Msa0160650 | Msa0275560 | -0.820566 | 6.409543e-53 | -8.615850e-47 |
| Msa0163530 | Msa0275560 | -0.824022 | 1.010799e-53 | -8.615850e-47 |
| Msa0163960 | Msa0275560 | -0.808178 | 3.518623e-50 | -8.615850e-47 |
| Msa0167150 | Msa0275560 | -0.816699 | 4.833631e-52 | -8.615850e-47 |
| Msa0169050 | Msa0275560 | 0.804451 | 2.146716e-49 | -8.615850e-47 |
| Msa0174060 | Msa0275560 | -0.801890 | 7.273234e-49 | -8.615850e-47 |
| Msa0174590 | Msa0275560 | 0.802979 | 4.337720e-49 | -8.615850e-47 |
| Msa0178440 | Msa0275560 | -0.822260 | 2.605044e-53 | -8.615850e-47 |
| Msa0180100 | Msa0275560 | -0.836403 | 9.551580e-57 | -8.615850e-47 |
| Msa0184510 | Msa0275560 | -0.847887 | 8.702092e-60 | -8.615850e-47 |
| Msa0184750 | Msa0275560 | 0.801099 | 1.056311e-48 | -8.615850e-47 |
| Msa0192470 | Msa0275560 | 0.833730 | 4.508591e-56 | -8.615850e-47 |
| Msa0194750 | Msa0275560 | -0.811012 | 8.661083e-51 | -8.615850e-47 |
| Msa0208710 | Msa0275560 | -0.804116 | 2.521269e-49 | -8.615850e-47 |
| Msa0209370 | Msa0275560 | -0.801314 | 9.544720e-49 | -8.615850e-47 |
| Msa0225070 | Msa0275560 | -0.847072 | 1.457403e-59 | -8.615850e-47 |
| Msa0236690 | Msa0275560 | -0.823262 | 1.523017e-53 | -8.615850e-47 |
| Msa0236940 | Msa0275560 | 0.810036 | 1.407472e-50 | -8.615850e-47 |
| Msa0238140 | Msa0275560 | 0.826073 | 3.313387e-54 | -8.615850e-47 |
| Msa0248410 | Msa0275560 | 0.812566 | 3.974426e-51 | -8.615850e-47 |
| Msa0256540 | Msa0275560 | 0.803166 | 3.968709e-49 | -8.615850e-47 |
| Msa0266140 | Msa0275560 | -0.816314 | 5.896011e-52 | -8.615850e-47 |
| Msa0267450 | Msa0275560 | -0.804061 | 2.587534e-49 | -8.615850e-47 |
| Msa0269660 | Msa0275560 | -0.819866 | 9.275468e-53 | -8.615850e-47 |
| Msa0271300 | Msa0275560 | 0.807222 | 5.617940e-50 | -8.615850e-47 |
| Msa0272840 | Msa0275560 | 0.828828 | 7.237170e-55 | -8.615850e-47 |
| Msa0275560 | Msa0275570 | 0.810969 | 8.846816e-51 | -8.615850e-47 |
| Msa0275560 | Msa0286660 | 0.812311 | 4.520044e-51 | -8.615850e-47 |
| Msa0275560 | Msa0290800 | 0.801746 | 7.785529e-49 | -8.615850e-47 |
| Msa0275560 | Msa0295680 | 0.813570 | 2.393811e-51 | -8.615850e-47 |
| Msa0275560 | Msa0303920 | 0.806724 | 7.157542e-50 | -8.615850e-47 |
| Msa0275560 | Msa0304060 | -0.821977 | 3.030567e-53 | -8.615850e-47 |
| Msa0275560 | Msa0309670 | -0.811315 | 7.446448e-51 | -8.615850e-47 |
| Msa0275560 | Msa0328870 | 0.803229 | 3.851585e-49 | -8.615850e-47 |
| Msa0275560 | Msa0330770 | -0.806489 | 8.024561e-50 | -8.615850e-47 |
| Msa0275560 | Msa0334320 | 0.808612 | 2.842671e-50 | -8.615850e-47 |
| Msa0275560 | Msa0367590 | -0.817961 | 2.513010e-52 | -8.615850e-47 |
| Msa0275560 | Msa0375570 | -0.805078 | 1.588074e-49 | -8.615850e-47 |
| Msa0275560 | Msa0378310 | -0.831411 | 1.694813e-55 | -8.615850e-47 |
| Msa0275560 | Msa0382860 | 0.838791 | 2.331189e-57 | -8.615850e-47 |
| Msa0275560 | Msa0389710 | 0.808678 | 2.752092e-50 | -8.615850e-47 |
| Msa0275560 | Msa0403740 | -0.800131 | 1.664583e-48 | -8.615850e-47 |
| Msa0275560 | Msa0415200 | -0.803009 | 4.276975e-49 | -8.615850e-47 |
| Msa0275560 | Msa0416040 | 0.806572 | 7.708027e-50 | -8.615850e-47 |
| Msa0275560 | Msa0428290 | -0.801057 | 1.077313e-48 | -8.615850e-47 |
| Msa0275560 | Msa0432940 | 0.832739 | 7.961802e-56 | -8.615850e-47 |
| Msa0275560 | Msa0432970 | 0.833590 | 4.886721e-56 | -8.615850e-47 |
| Msa0275560 | Msa0447830 | -0.800629 | 1.317762e-48 | -8.615850e-47 |
| Msa0275560 | Msa0456450 | -0.808294 | 3.323877e-50 | -8.615850e-47 |
| Msa0275560 | Msa0457070 | -0.824583 | 7.462858e-54 | -8.615850e-47 |
| Msa0275560 | Msa0477030 | 0.842922 | 1.923040e-58 | -8.615850e-47 |
| Msa0275560 | Msa0483090 | -0.802544 | 5.335745e-49 | -8.615850e-47 |
| Msa0275560 | Msa0491160 | -0.808056 | 3.736253e-50 | -8.615850e-47 |
| Msa0275560 | Msa0508160 | 0.804996 | 1.652308e-49 | -8.615850e-47 |
| Msa0275560 | Msa0529360 | 0.815918 | 7.226325e-52 | -8.615850e-47 |
| Msa0275560 | Msa0538050 | -0.826591 | 2.494657e-54 | -8.615850e-47 |
| Msa0275560 | Msa0544600 | -0.813991 | 1.933894e-51 | -8.615850e-47 |
| Msa0275560 | Msa0555510 | -0.820594 | 6.317076e-53 | -8.615850e-47 |
| Msa0275560 | Msa0561420 | -0.836144 | 1.111818e-56 | -8.615850e-47 |
| Msa0275560 | Msa0562310 | -0.805638 | 1.211674e-49 | -8.615850e-47 |
| Msa0275560 | Msa0563230 | -0.809575 | 1.768479e-50 | -8.615850e-47 |
| Msa0275560 | Msa0563440 | 0.823298 | 1.493391e-53 | -8.615850e-47 |
| Msa0275560 | Msa0565860 | -0.805927 | 1.053856e-49 | -8.615850e-47 |
| Msa0275560 | Msa0569100 | 0.816125 | 6.497465e-52 | -8.615850e-47 |
| Msa0275560 | Msa0572730 | -0.800250 | 1.574062e-48 | -8.615850e-47 |
| Msa0275560 | Msa0573970 | -0.819413 | 1.176440e-52 | -8.615850e-47 |
| Msa0275560 | Msa0579170 | -0.832632 | 8.463121e-56 | -8.615850e-47 |
| Msa0275560 | Msa0579230 | -0.845055 | 5.154468e-59 | -8.615850e-47 |
| Msa0275560 | Msa0580210 | 0.825313 | 5.016707e-54 | -8.615850e-47 |
| Msa0275560 | Msa0585720 | -0.823867 | 1.098878e-53 | -8.615850e-47 |
| Msa0275560 | Msa0602320 | -0.805667 | 1.194825e-49 | -8.615850e-47 |
| Msa0275560 | Msa0608780 | -0.813381 | 2.634137e-51 | -8.615850e-47 |
| Msa0275560 | Msa0612580 | 0.808604 | 2.854576e-50 | -8.615850e-47 |
| Msa0275560 | Msa0615430 | -0.825373 | 4.857438e-54 | -8.615850e-47 |
| Msa0275560 | Msa0617470 | -0.804684 | 1.919707e-49 | -8.615850e-47 |
| Msa0275560 | Msa0624930 | 0.832180 | 1.095340e-55 | -8.615850e-47 |
| Msa0275560 | Msa0625900 | -0.813793 | 2.138062e-51 | -8.615850e-47 |
| Msa0275560 | Msa0634260 | -0.804019 | 2.641129e-49 | -8.615850e-47 |
| Msa0275560 | Msa0638820 | 0.804221 | 2.397668e-49 | -8.615850e-47 |
| Msa0275560 | Msa0649250 | -0.823366 | 1.439735e-53 | -8.615850e-47 |
| Msa0275560 | Msa0649530 | -0.811724 | 6.068325e-51 | -8.615850e-47 |
| Msa0275560 | Msa0654880 | -0.830182 | 3.392002e-55 | -8.615850e-47 |
| Msa0275560 | Msa0658280 | -0.800276 | 1.554671e-48 | -8.615850e-47 |
| Msa0275560 | Msa0659020 | -0.814895 | 1.220196e-51 | -8.615850e-47 |
| Msa0275560 | Msa0663580 | -0.820392 | 7.027004e-53 | -8.615850e-47 |
| Msa0275560 | Msa0663690 | -0.811837 | 5.733199e-51 | -8.615850e-47 |
| Msa0275560 | Msa0683200 | -0.809206 | 2.122205e-50 | -8.615850e-47 |
| Msa0275560 | Msa0688880 | -0.801124 | 1.043978e-48 | -8.615850e-47 |
| Msa0275560 | Msa0691740 | -0.821547 | 3.809666e-53 | -8.615850e-47 |
| Msa0275560 | Msa0695630 | 0.844815 | 5.985555e-59 | -8.615850e-47 |
| Msa0275560 | Msa0697520 | 0.815103 | 1.097251e-51 | -8.615850e-47 |
| Msa0275560 | Msa0698480 | -0.832452 | 9.379739e-56 | -8.615850e-47 |
| Msa0275560 | Msa0698650 | -0.830863 | 2.310603e-55 | -8.615850e-47 |
| Msa0275560 | Msa0700250 | -0.805311 | 1.419255e-49 | -8.615850e-47 |
| Msa0275560 | Msa0702020 | -0.820882 | 5.422679e-53 | -8.615850e-47 |
| Msa0275560 | Msa0705520 | 0.834782 | 2.456520e-56 | -8.615850e-47 |
| Msa0275560 | Msa0756670 | -0.817417 | 3.333662e-52 | -8.615850e-47 |
| Msa0275560 | Msa0774360 | -0.810393 | 1.178444e-50 | -8.615850e-47 |
| Msa0275560 | Msa0797980 | -0.832419 | 9.556636e-56 | -8.615850e-47 |
| Msa0275560 | Msa0803530 | -0.840302 | 9.434937e-58 | -8.615850e-47 |
| Msa0275560 | Msa0804170 | 0.807560 | 4.762018e-50 | -8.615850e-47 |
| Msa0275560 | Msa0836060 | -0.817593 | 3.042213e-52 | -8.615850e-47 |
| Msa0275560 | Msa0844870 | -0.827093 | 1.892089e-54 | -8.615850e-47 |
| Msa0275560 | Msa0844970 | -0.839536 | 1.494653e-57 | -8.615850e-47 |
| Msa0275560 | Msa0846070 | -0.816670 | 4.906136e-52 | -8.615850e-47 |
| Msa0275560 | Msa0861400 | -0.808640 | 2.804624e-50 | -8.615850e-47 |
| Msa0275560 | Msa0907170 | 0.804177 | 2.448417e-49 | -8.615850e-47 |
| Msa0275560 | Msa0914710 | 0.813421 | 2.581977e-51 | -8.615850e-47 |
| Msa0275560 | Msa0917630 | -0.832040 | 1.185686e-55 | -8.615850e-47 |
| Msa0275560 | Msa0925630 | -0.826733 | 2.306989e-54 | -8.615850e-47 |
| Msa0275560 | Msa0931550 | -0.824418 | 8.159987e-54 | -8.615850e-47 |
| Msa0275560 | Msa0932150 | 0.800135 | 1.661386e-48 | -8.615850e-47 |
| Msa0275560 | Msa0950470 | -0.820576 | 6.374958e-53 | -8.615850e-47 |
| Msa0275560 | Msa0950570 | -0.819883 | 9.191493e-53 | -8.615850e-47 |
| Msa0275560 | Msa0967900 | -0.845851 | 3.138048e-59 | -8.615850e-47 |
| Msa0275560 | Msa0975440 | -0.805059 | 1.602734e-49 | -8.615850e-47 |
| Msa0275560 | Msa1024570 | 0.811431 | 7.024094e-51 | -8.615850e-47 |
| Msa0275560 | Msa1031530 | -0.823039 | 1.716201e-53 | -8.615850e-47 |
| Msa0275560 | Msa1035640 | -0.802959 | 4.379167e-49 | -8.615850e-47 |
| Msa0275560 | Msa1063190 | 0.811517 | 6.729510e-51 | -8.615850e-47 |
| Msa0275560 | Msa1070630 | -0.821188 | 4.610836e-53 | -8.615850e-47 |
| Msa0275560 | Msa1078600 | -0.823680 | 1.215959e-53 | -8.615850e-47 |
| Msa0275560 | Msa1078770 | -0.821916 | 3.130491e-53 | -8.615850e-47 |
| Msa0275560 | Msa1090150 | 0.808401 | 3.154377e-50 | -8.615850e-47 |
| Msa0275560 | Msa1093190 | -0.814122 | 1.809598e-51 | -8.615850e-47 |
| Msa0275560 | Msa1107330 | 0.800008 | 1.763137e-48 | -8.615850e-47 |
| Msa0275560 | Msa1109500 | -0.809183 | 2.145650e-50 | -8.615850e-47 |
| Msa0275560 | Msa1111650 | 0.810469 | 1.134963e-50 | -8.615850e-47 |
| Msa0275560 | Msa1120560 | 0.829305 | 5.545072e-55 | -8.615850e-47 |
| Msa0275560 | Msa1125450 | -0.844002 | 9.897990e-59 | -8.615850e-47 |
| Msa0275560 | Msa1127910 | 0.804924 | 1.709942e-49 | -8.615850e-47 |
| Msa0275560 | Msa1143860 | -0.801297 | 9.621459e-49 | -8.615850e-47 |
| Msa0275560 | Msa1158450 | -0.823518 | 1.326484e-53 | -8.615850e-47 |
| Msa0275560 | Msa1164570 | -0.845010 | 5.301876e-59 | -8.615850e-47 |
| Msa0275560 | Msa1165820 | 0.802275 | 6.059947e-49 | -8.615850e-47 |
| Msa0275560 | Msa1169600 | -0.814339 | 1.620618e-51 | -8.615850e-47 |
| Msa0275560 | Msa1204390 | -0.805728 | 1.160405e-49 | -8.615850e-47 |
| Msa0275560 | Msa1205270 | -0.841344 | 5.029127e-58 | -8.615850e-47 |
| Msa0275560 | Msa1211130 | 0.810480 | 1.128612e-50 | -8.615850e-47 |
| Msa0275560 | Msa1225140 | -0.803180 | 3.942594e-49 | -8.615850e-47 |
| Msa0275560 | Msa1228600 | -0.823322 | 1.474290e-53 | -8.615850e-47 |
| Msa0275560 | Msa1236860 | -0.812571 | 3.965375e-51 | -8.615850e-47 |
| Msa0275560 | Msa1244900 | 0.814682 | 1.360204e-51 | -8.615850e-47 |
| Msa0275560 | Msa1297220 | -0.851019 | 1.165117e-60 | -8.615850e-47 |
| Msa0275560 | Msa1320660 | -0.804976 | 1.667957e-49 | -8.615850e-47 |
| Msa0275560 | Msa1323260 | -0.844999 | 5.339375e-59 | -8.615850e-47 |
| Msa0275560 | Msa1327690 | -0.806752 | 7.061712e-50 | -8.615850e-47 |
| Msa0275560 | Msa1329020 | -0.811470 | 6.888251e-51 | -8.615850e-47 |
| Msa0275560 | Msa1333210 | 0.803825 | 2.898041e-49 | -8.615850e-47 |
| Msa0275560 | Msa1342360 | -0.808313 | 3.293177e-50 | -8.615850e-47 |
| Msa0275560 | Msa1343450 | -0.866210 | 3.367344e-65 | -8.615850e-47 |
| Msa0275560 | Msa1344930 | 0.822525 | 2.261281e-53 | -8.615850e-47 |
| Msa0275560 | Msa1345390 | 0.837410 | 5.283101e-57 | -8.615850e-47 |
| Msa0275560 | Msa1346220 | -0.820013 | 8.582794e-53 | -8.615850e-47 |
| Msa0275560 | Msa1346340 | -0.817023 | 4.088798e-52 | -8.615850e-47 |
| Msa0275560 | Msa1346920 | -0.801661 | 8.105607e-49 | -8.615850e-47 |
| Msa0275560 | Msa1350580 | -0.816012 | 6.885256e-52 | -8.615850e-47 |
| Msa0275560 | Msa1363560 | -0.808054 | 3.738560e-50 | -8.615850e-47 |
| Msa0275560 | Msa1371060 | -0.828231 | 1.008713e-54 | -8.615850e-47 |
| Msa0275560 | Msa1371300 | 0.835137 | 1.999075e-56 | -8.615850e-47 |
| Msa0275560 | Msa1373990 | 0.819094 | 1.391249e-52 | -8.615850e-47 |
| Msa0275560 | Msa1375980 | -0.804274 | 2.336599e-49 | -8.615850e-47 |
| Msa0275560 | Msa1376010 | -0.802583 | 5.237499e-49 | -8.615850e-47 |
| Msa0275560 | Msa1377980 | -0.803963 | 2.712156e-49 | -8.615850e-47 |
| Msa0275560 | Msa1382100 | -0.820361 | 7.144834e-53 | -8.615850e-47 |
| Msa0275560 | Msa1382750 | -0.823890 | 1.085511e-53 | -8.615850e-47 |
| Msa0275560 | Msa1384410 | -0.802911 | 4.480044e-49 | -8.615850e-47 |
| Msa0275560 | Msa1386250 | -0.835409 | 1.706396e-56 | -8.615850e-47 |
| Msa0275560 | Msa1408280 | -0.802757 | 4.822573e-49 | -8.615850e-47 |
| Msa0275560 | Msa1412740 | -0.803721 | 3.044747e-49 | -8.615850e-47 |
| Msa0275560 | Msa1413020 | 0.810080 | 1.376825e-50 | -8.615850e-47 |
| Msa0275560 | Msa1418840 | -0.804604 | 1.994449e-49 | -8.615850e-47 |
| Msa0275560 | Msa1436660 | -0.803306 | 3.713353e-49 | -8.615850e-47 |
| Msa0275560 | Msa1438780 | -0.811954 | 5.406115e-51 | -8.615850e-47 |
| Msa0275560 | Msa1450780 | -0.808478 | 3.037110e-50 | -8.615850e-47 |
| Msa0275560 | Msa1453180 | -0.806755 | 7.050651e-50 | -8.615850e-47 |
| Msa0275560 | Msa1456620 | -0.834952 | 2.225652e-56 | -8.615850e-47 |
| Msa0275560 | Msa1460530 | -0.842232 | 2.931399e-58 | -8.615850e-47 |
| Msa0275560 | Msa1466530 | 0.808774 | 2.624933e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0275560 | MtrunA17_Chr2g0287841 | 96.117 | 412 | 15 | 1 | 19 | 429 | 37 | 448 | 0.0 | 805 |
| Msa0275560 | MtrunA17_Chr2g0287861 | 85.948 | 427 | 55 | 1 | 1 | 427 | 1 | 422 | 0.0 | 703 |
| Msa0275560 | MtrunA17_Chr2g0287811 | 55.147 | 408 | 159 | 11 | 34 | 429 | 25 | 420 | 5.07e-141 | 409 |
| Msa0275560 | MtrunA17_Chr2g0287781 | 55.000 | 440 | 167 | 10 | 1 | 429 | 462 | 881 | 6.88e-134 | 417 |
| Msa0275560 | MtrunA17_Chr2g0287781 | 54.773 | 440 | 168 | 10 | 1 | 429 | 924 | 1343 | 3.48e-132 | 412 |
| Msa0275560 | MtrunA17_Chr2g0287781 | 54.654 | 419 | 159 | 8 | 1 | 410 | 1 | 397 | 3.31e-128 | 401 |
| Msa0275560 | MtrunA17_Chr4g0065581 | 48.966 | 435 | 185 | 11 | 22 | 429 | 25 | 449 | 3.33e-127 | 375 |
| Msa0275560 | MtrunA17_Chr1g0185651 | 39.286 | 420 | 218 | 9 | 31 | 428 | 38 | 442 | 1.44e-86 | 271 |
| Msa0275560 | MtrunA17_Chr1g0185661 | 40.596 | 436 | 228 | 10 | 9 | 429 | 659 | 1078 | 1.02e-85 | 283 |
| Msa0275560 | MtrunA17_Chr1g0185661 | 39.770 | 435 | 230 | 11 | 9 | 428 | 8 | 425 | 2.48e-81 | 271 |
| Msa0275560 | MtrunA17_Chr2g0287821 | 38.663 | 419 | 238 | 8 | 20 | 429 | 42 | 450 | 3.52e-81 | 257 |
| Msa0275560 | MtrunA17_Chr1g0187841 | 37.723 | 448 | 233 | 14 | 1 | 425 | 1 | 425 | 1.05e-72 | 234 |
| Msa0275560 | MtrunA17_Chr7g0273041 | 34.821 | 448 | 253 | 18 | 1 | 429 | 1 | 428 | 8.97e-64 | 211 |
| Msa0275560 | MtrunA17_Chr2g0287831 | 35.680 | 412 | 226 | 10 | 30 | 429 | 21 | 405 | 6.43e-60 | 201 |
| Msa0275560 | MtrunA17_Chr7g0267171 | 27.033 | 455 | 239 | 22 | 14 | 417 | 48 | 460 | 2.70e-20 | 92.8 |
| Msa0275560 | MtrunA17_Chr7g0239001 | 25.346 | 434 | 246 | 16 | 28 | 418 | 23 | 421 | 1.35e-17 | 84.3 |
| Msa0275560 | MtrunA17_Chr7g0249451 | 26.500 | 400 | 229 | 18 | 45 | 419 | 68 | 427 | 1.78e-17 | 84.3 |
| Msa0275560 | MtrunA17_Chr4g0053721 | 23.797 | 395 | 230 | 17 | 47 | 417 | 78 | 425 | 1.07e-14 | 76.3 |
| Msa0275560 | MtrunA17_Chr8g0390761 | 23.438 | 384 | 227 | 15 | 46 | 413 | 114 | 446 | 1.00e-13 | 72.8 |
| Msa0275560 | MtrunA17_Chr5g0442921 | 26.250 | 160 | 108 | 5 | 260 | 418 | 399 | 549 | 2.39e-13 | 72.0 |
| Msa0275560 | MtrunA17_Chr3g0095891 | 23.469 | 392 | 243 | 15 | 49 | 418 | 98 | 454 | 2.81e-13 | 71.2 |
| Msa0275560 | MtrunA17_Chr1g0179751 | 23.020 | 404 | 247 | 15 | 43 | 419 | 100 | 466 | 3.48e-13 | 71.2 |
| Msa0275560 | MtrunA17_Chr5g0434411 | 22.251 | 382 | 247 | 11 | 55 | 420 | 88 | 435 | 7.00e-13 | 70.1 |
| Msa0275560 | MtrunA17_Chr7g0275731 | 25.455 | 385 | 226 | 17 | 49 | 418 | 142 | 480 | 1.24e-12 | 69.3 |
| Msa0275560 | MtrunA17_Chr4g0027681 | 22.596 | 416 | 240 | 15 | 38 | 418 | 64 | 432 | 2.90e-12 | 68.2 |
| Msa0275560 | MtrunA17_Chr3g0130931 | 23.711 | 388 | 228 | 15 | 49 | 417 | 105 | 443 | 5.03e-12 | 67.4 |
| Msa0275560 | MtrunA17_Chr1g0210201 | 24.675 | 385 | 222 | 16 | 49 | 418 | 132 | 463 | 5.14e-12 | 67.4 |
| Msa0275560 | MtrunA17_Chr3g0099891 | 24.936 | 389 | 221 | 16 | 46 | 417 | 115 | 449 | 8.67e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0275560 | AT1G03220.1 | 38.657 | 432 | 238 | 8 | 12 | 429 | 7 | 425 | 2.64e-86 | 270 |
| Msa0275560 | AT1G03230.1 | 38.679 | 424 | 215 | 9 | 29 | 429 | 25 | 426 | 1.85e-84 | 265 |
| Msa0275560 | AT5G19110.1 | 32.558 | 430 | 241 | 12 | 11 | 429 | 8 | 399 | 2.25e-58 | 197 |
| Msa0275560 | AT5G19110.2 | 32.558 | 430 | 241 | 12 | 11 | 429 | 44 | 435 | 4.15e-58 | 197 |
| Msa0275560 | AT5G19100.1 | 36.754 | 419 | 184 | 15 | 32 | 429 | 26 | 384 | 4.19e-56 | 190 |
| Msa0275560 | AT5G48430.1 | 35.606 | 264 | 141 | 8 | 172 | 428 | 158 | 399 | 1.10e-37 | 141 |
| Msa0275560 | AT5G19120.1 | 30.233 | 430 | 232 | 14 | 1 | 417 | 1 | 375 | 3.84e-37 | 139 |
| Msa0275560 | AT5G36260.1 | 23.844 | 411 | 256 | 16 | 38 | 429 | 64 | 436 | 3.48e-18 | 87.0 |
| Msa0275560 | AT3G25700.1 | 24.873 | 394 | 240 | 14 | 49 | 418 | 84 | 445 | 2.98e-17 | 84.0 |
| Msa0275560 | AT3G12700.1 | 25.320 | 391 | 247 | 12 | 43 | 420 | 100 | 458 | 1.03e-16 | 82.4 |
| Msa0275560 | AT5G02190.1 | 24.427 | 393 | 229 | 12 | 58 | 418 | 82 | 438 | 8.53e-16 | 79.7 |
| Msa0275560 | AT3G02740.1 | 20.673 | 416 | 258 | 15 | 38 | 427 | 71 | 440 | 2.35e-15 | 78.2 |
| Msa0275560 | AT3G02740.2 | 20.596 | 403 | 251 | 14 | 48 | 427 | 9 | 365 | 3.04e-15 | 77.8 |
| Msa0275560 | AT1G08210.1 | 24.561 | 399 | 232 | 20 | 46 | 418 | 81 | 436 | 2.36e-14 | 75.1 |
| Msa0275560 | AT1G08210.3 | 24.685 | 397 | 230 | 20 | 48 | 418 | 131 | 484 | 2.63e-14 | 75.1 |
| Msa0275560 | AT1G08210.4 | 24.685 | 397 | 230 | 20 | 48 | 418 | 117 | 470 | 3.04e-14 | 75.1 |
| Msa0275560 | AT1G01300.1 | 25.581 | 387 | 223 | 18 | 49 | 418 | 142 | 480 | 3.73e-14 | 74.7 |
| Msa0275560 | AT3G54400.1 | 22.368 | 380 | 238 | 14 | 49 | 418 | 88 | 420 | 9.85e-14 | 73.2 |
| Msa0275560 | AT1G65240.1 | 23.908 | 435 | 229 | 20 | 35 | 429 | 57 | 429 | 3.68e-13 | 71.6 |
| Msa0275560 | AT5G10770.1 | 24.615 | 390 | 222 | 18 | 49 | 418 | 132 | 469 | 4.39e-13 | 71.2 |
| Msa0275560 | AT2G36670.1 | 24.181 | 397 | 239 | 13 | 46 | 419 | 102 | 459 | 1.91e-12 | 69.3 |
| Msa0275560 | AT2G36670.4 | 23.990 | 396 | 239 | 13 | 47 | 419 | 32 | 388 | 3.14e-12 | 68.6 |
| Msa0275560 | AT2G36670.3 | 23.990 | 396 | 239 | 13 | 47 | 419 | 32 | 388 | 3.14e-12 | 68.6 |
| Msa0275560 | AT1G25510.1 | 24.611 | 386 | 223 | 14 | 49 | 419 | 148 | 480 | 3.64e-12 | 68.6 |
| Msa0275560 | AT2G36670.2 | 24.190 | 401 | 241 | 14 | 43 | 419 | 93 | 454 | 3.82e-12 | 68.6 |
| Msa0275560 | AT1G66180.1 | 23.419 | 427 | 258 | 18 | 18 | 420 | 43 | 424 | 6.78e-12 | 67.4 |
| Msa0275560 | AT1G08210.2 | 23.168 | 423 | 231 | 20 | 48 | 418 | 83 | 463 | 1.61e-11 | 66.6 |
| Msa0275560 | AT3G52500.1 | 22.084 | 403 | 252 | 12 | 49 | 418 | 90 | 463 | 2.13e-11 | 65.9 |
| Msa0275560 | AT5G22850.1 | 22.304 | 408 | 231 | 17 | 48 | 419 | 80 | 437 | 3.74e-11 | 65.5 |
Find 82 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGACTAATTGTACTAATTT+TGG | 0.134043 | 2_3:+7651838 | None:intergenic |
| TTTATTGTCTATTGACAAAA+AGG | 0.189223 | 2_3:-7651873 | Msa0275560:CDS |
| TTGAGGAAATCACGAATAAA+TGG | 0.227916 | 2_3:+7651785 | None:intergenic |
| GAGCTTCAGTTCCTCACTTT+TGG | 0.236625 | 2_3:-7651465 | Msa0275560:CDS |
| TATTCGTGATTTCCTCAAAA+AGG | 0.259281 | 2_3:-7651780 | Msa0275560:CDS |
| TGGTGTGGTTTGAACAAATT+TGG | 0.260072 | 2_3:+7652015 | None:intergenic |
| ACCGATAACAATTGAAGTTT+TGG | 0.265911 | 2_3:+7651541 | None:intergenic |
| GCTAGGTTAAAATTTGTTCT+AGG | 0.270039 | 2_3:+7652538 | None:intergenic |
| CTTTACAGTAACCATCAAAT+TGG | 0.281545 | 2_3:+7651622 | None:intergenic |
| TCTAGTTGCATTGACATTGA+TGG | 0.295352 | 2_3:-7652259 | Msa0275560:CDS |
| AACCTAGCCATTGATCTTGC+TGG | 0.319667 | 2_3:-7652523 | Msa0275560:CDS |
| TCAATTGGAGGACAATCTTT+TGG | 0.329783 | 2_3:-7651513 | Msa0275560:CDS |
| TGAGGAACTGAAGCTCAATT+TGG | 0.334065 | 2_3:+7651472 | None:intergenic |
| TTTGTGCAACCTGGCTTGAA+TGG | 0.358259 | 2_3:+7652391 | None:intergenic |
| GTTGATGGGTCTTTCTTGAT+AGG | 0.358725 | 2_3:+7652595 | None:intergenic |
| TATTCATGAAGCCAATTTGA+TGG | 0.363709 | 2_3:-7651633 | Msa0275560:CDS |
| TGTTATCGGTGGACATCAAT+TGG | 0.375292 | 2_3:-7651528 | Msa0275560:CDS |
| CTTGTTGAGCCACATTGAAT+AGG | 0.379540 | 2_3:+7652448 | None:intergenic |
| ACCAAAACTTCAATTGTTAT+CGG | 0.380269 | 2_3:-7651542 | Msa0275560:CDS |
| GGCAAACAAAGAGAGAATTT+AGG | 0.395086 | 2_3:+7652109 | None:intergenic |
| ACAGGTGCTATTTCTGTTCA+AGG | 0.411194 | 2_3:-7651971 | Msa0275560:CDS |
| CTAGTGATATGAGGAAGAAA+TGG | 0.415938 | 2_3:+7652686 | None:intergenic |
| ATTTGGACAATTCATGAAAA+GGG | 0.422564 | 2_3:+7652032 | None:intergenic |
| GCATGTCTTGGATTTGTTGA+TGG | 0.423312 | 2_3:-7651590 | Msa0275560:CDS |
| AACTTGCTTGTTGGATCAGT+TGG | 0.426003 | 2_3:-7652061 | Msa0275560:CDS |
| AATTTGGACAATTCATGAAA+AGG | 0.427332 | 2_3:+7652031 | None:intergenic |
| GGATTCACCAACTTGCTTGT+TGG | 0.430726 | 2_3:-7652070 | Msa0275560:CDS |
| ATAAAGAAGAAACTGAGAAA+AGG | 0.436295 | 2_3:+7652662 | None:intergenic |
| AATCCTTGTTTGTTTGAAGA+AGG | 0.439821 | 2_3:+7652088 | None:intergenic |
| GGGACAGGATTAATAATTAG+TGG | 0.443711 | 2_3:+7651995 | None:intergenic |
| TGCTTCAAGGTGGGGTGCAG+TGG | 0.447453 | 2_3:-7651658 | Msa0275560:CDS |
| CATGTGTTGTTTGTGCAACC+TGG | 0.451509 | 2_3:+7652382 | None:intergenic |
| TTCTTCAATGCAAGCTGAGT+TGG | 0.460885 | 2_3:+7652142 | None:intergenic |
| GGAATCAGTGGCACCATTTG+AGG | 0.464746 | 2_3:-7651732 | Msa0275560:CDS |
| TAAAGAAGAAACTGAGAAAA+GGG | 0.467892 | 2_3:+7652663 | None:intergenic |
| ATTATTAATCCTGTCCCAAC+AGG | 0.470906 | 2_3:-7651989 | Msa0275560:CDS |
| AGAGTTGATCTTGTGCTTCA+AGG | 0.477558 | 2_3:-7651671 | Msa0275560:CDS |
| GAGTCAAAACATGCCTCAAA+TGG | 0.482657 | 2_3:+7651719 | None:intergenic |
| TTGTGCAACCTGGCTTGAAT+GGG | 0.485928 | 2_3:+7652392 | None:intergenic |
| TTTCTTGATAGGAAGAATGA+AGG | 0.490359 | 2_3:+7652606 | None:intergenic |
| TTGTCAATAGACAATAAAGA+AGG | 0.490781 | 2_3:+7651878 | None:intergenic |
| GAGGATGATTCACCACTCAA+TGG | 0.491272 | 2_3:-7652220 | Msa0275560:CDS |
| AATGAATTTAGCTAATGAGT+TGG | 0.503366 | 2_3:+7652345 | None:intergenic |
| AATCTATTCTACACATCTGT+TGG | 0.508133 | 2_3:-7652571 | Msa0275560:CDS |
| CAAGCTGAGTTGGTAATGAA+AGG | 0.513852 | 2_3:+7652152 | None:intergenic |
| TTGATCTTGTGCTTCAAGGT+GGG | 0.520200 | 2_3:-7651667 | Msa0275560:CDS |
| AGGATGATTCACCACTCAAT+GGG | 0.521686 | 2_3:-7652219 | Msa0275560:CDS |
| GAAGTTTGCAATTCAGTGAA+AGG | 0.522059 | 2_3:+7651818 | None:intergenic |
| ACTGCATGTGTTGGCTGCAA+TGG | 0.525689 | 2_3:-7652415 | Msa0275560:CDS |
| AGAAAAGGGCTAGTGATATG+AGG | 0.528990 | 2_3:+7652677 | None:intergenic |
| TGCAATGGCCCATTCAAGCC+AGG | 0.530361 | 2_3:-7652400 | Msa0275560:CDS |
| GAAATAGCACCTGTTGGGAC+AGG | 0.532623 | 2_3:+7651980 | None:intergenic |
| TTGCTTGTTGGATCAGTTGG+TGG | 0.532954 | 2_3:-7652058 | Msa0275560:CDS |
| GTGAAAGAGGTTAAGATTGA+CGG | 0.534189 | 2_3:-7651920 | Msa0275560:CDS |
| TGATCTTGTGCTTCAAGGTG+GGG | 0.534450 | 2_3:-7651666 | Msa0275560:CDS |
| ATCTTGCTGGAGAAAACCTA+TGG | 0.536922 | 2_3:-7652510 | Msa0275560:CDS |
| ATAGGAAGAATGAAGGATTG+TGG | 0.541111 | 2_3:+7652613 | None:intergenic |
| AGGATTAATAATTAGTGGTG+TGG | 0.541482 | 2_3:+7652000 | None:intergenic |
| CTCCAGCAAGATCAATGGCT+AGG | 0.543875 | 2_3:+7652521 | None:intergenic |
| GTCTTGGATTTGTTGATGGA+GGG | 0.545646 | 2_3:-7651586 | Msa0275560:CDS |
| GAACAGAAATAGCACCTGTT+GGG | 0.549887 | 2_3:+7651975 | None:intergenic |
| GTGTAGAATAGATTGGTTGA+TGG | 0.559559 | 2_3:+7652580 | None:intergenic |
| AAAACTTCAATTGTTATCGG+TGG | 0.566864 | 2_3:-7651539 | Msa0275560:CDS |
| AACAGATGTGTAGAATAGAT+TGG | 0.570338 | 2_3:+7652573 | None:intergenic |
| TGTAGAATAGATTGGTTGAT+GGG | 0.573951 | 2_3:+7652581 | None:intergenic |
| TGAACAGAAATAGCACCTGT+TGG | 0.577318 | 2_3:+7651974 | None:intergenic |
| TGAAGCACAAGATCAACTCT+TGG | 0.578393 | 2_3:+7651674 | None:intergenic |
| AGATAGAAAACTAAAGAGAG+TGG | 0.583757 | 2_3:-7651753 | Msa0275560:CDS |
| AACTGATCCAACAAGCAAGT+TGG | 0.586375 | 2_3:+7652063 | None:intergenic |
| TGTCTTGGATTTGTTGATGG+AGG | 0.587660 | 2_3:-7651587 | Msa0275560:CDS |
| TTTAGGAACAACTTGCATTG+TGG | 0.591108 | 2_3:+7651441 | None:intergenic |
| TTGCCTTCTTCAAACAAACA+AGG | 0.591857 | 2_3:-7652091 | Msa0275560:CDS |
| GTTGATCTTGTGCTTCAAGG+TGG | 0.595788 | 2_3:-7651668 | Msa0275560:CDS |
| GAGTGTCACAATCATACCAT+AGG | 0.596607 | 2_3:+7652494 | None:intergenic |
| TATCGGTGGACATCAATTGG+AGG | 0.618454 | 2_3:-7651525 | Msa0275560:CDS |
| TTCTACACATCTGTTGGCAT+AGG | 0.620750 | 2_3:-7652565 | Msa0275560:CDS |
| TGCATTGTGGACCAAAAGTG+AGG | 0.637111 | 2_3:+7651454 | None:intergenic |
| ACTAAAGAGAGTGGAATCAG+TGG | 0.638259 | 2_3:-7651744 | Msa0275560:CDS |
| GCCACATTGAATAGGAGTGT+AGG | 0.652802 | 2_3:+7652456 | None:intergenic |
| TGTACAGATACTGCATGTGT+TGG | 0.668991 | 2_3:-7652424 | Msa0275560:CDS |
| TCCTACACTCCTATTCAATG+TGG | 0.704332 | 2_3:-7652457 | Msa0275560:CDS |
| GAGTGGTGAATCATCCTCAG+CGG | 0.738840 | 2_3:+7652225 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATTAGCTAAATTCATTTT+TGG | - | chr2_3:7651811-7651830 | Msa0275560:CDS | 20.0% |
| !!! | ATATTTTATTGATGTGAAAG+AGG | - | chr2_3:7652218-7652237 | Msa0275560:CDS | 20.0% |
| !! | TTTATTGTCTATTGACAAAA+AGG | - | chr2_3:7652278-7652297 | Msa0275560:CDS | 20.0% |
| !! | TTATTGTCTATTGACAAAAA+GGG | - | chr2_3:7652279-7652298 | Msa0275560:CDS | 20.0% |
| !!! | TCATTAGCTAAATTCATTTT+TGG | - | chr2_3:7651811-7651830 | Msa0275560:CDS | 20.0% |
| !!! | ATATTTTATTGATGTGAAAG+AGG | - | chr2_3:7652218-7652237 | Msa0275560:CDS | 20.0% |
| !! | TTTATTGTCTATTGACAAAA+AGG | - | chr2_3:7652278-7652297 | Msa0275560:CDS | 20.0% |
| !! | TTATTGTCTATTGACAAAAA+GGG | - | chr2_3:7652279-7652298 | Msa0275560:CDS | 20.0% |
| ! | TAAAGAAGAAACTGAGAAAA+GGG | + | chr2_3:7651491-7651510 | None:intergenic | 25.0% |
| ! | ATAAAGAAGAAACTGAGAAA+AGG | + | chr2_3:7651492-7651511 | None:intergenic | 25.0% |
| ! | AATGAATTTAGCTAATGAGT+TGG | + | chr2_3:7651809-7651828 | None:intergenic | 25.0% |
| !!! | TTAGCTAAATTCATTTTTGG+TGG | - | chr2_3:7651814-7651833 | Msa0275560:CDS | 25.0% |
| ! | ATTTCTCAACAAAAAGTTTC+TGG | - | chr2_3:7651862-7651881 | Msa0275560:CDS | 25.0% |
| !!! | AGAATTCCTTTAGTGTTTTT+TGG | + | chr2_3:7651961-7651980 | None:intergenic | 25.0% |
| ! | AAAAACACTAAAGGAATTCT+TGG | - | chr2_3:7651961-7651980 | Msa0275560:CDS | 25.0% |
| ! | ATTTGGACAATTCATGAAAA+GGG | + | chr2_3:7652122-7652141 | None:intergenic | 25.0% |
| ! | AATTTGGACAATTCATGAAA+AGG | + | chr2_3:7652123-7652142 | None:intergenic | 25.0% |
| ! | TTGTCAATAGACAATAAAGA+AGG | + | chr2_3:7652276-7652295 | None:intergenic | 25.0% |
| !! | AGGACTAATTGTACTAATTT+TGG | + | chr2_3:7652316-7652335 | None:intergenic | 25.0% |
| !!! | GTTTTGGTAAATGACATTTT+TGG | + | chr2_3:7652597-7652616 | None:intergenic | 25.0% |
| ! | ACCAAAACTTCAATTGTTAT+CGG | - | chr2_3:7652609-7652628 | Msa0275560:CDS | 25.0% |
| ! | TAAAGAAGAAACTGAGAAAA+GGG | + | chr2_3:7651491-7651510 | None:intergenic | 25.0% |
| ! | ATAAAGAAGAAACTGAGAAA+AGG | + | chr2_3:7651492-7651511 | None:intergenic | 25.0% |
| ! | AATGAATTTAGCTAATGAGT+TGG | + | chr2_3:7651809-7651828 | None:intergenic | 25.0% |
| !!! | TTAGCTAAATTCATTTTTGG+TGG | - | chr2_3:7651814-7651833 | Msa0275560:CDS | 25.0% |
| ! | ATTTCTCAACAAAAAGTTTC+TGG | - | chr2_3:7651862-7651881 | Msa0275560:CDS | 25.0% |
| !!! | AGAATTCCTTTAGTGTTTTT+TGG | + | chr2_3:7651961-7651980 | None:intergenic | 25.0% |
| ! | AAAAACACTAAAGGAATTCT+TGG | - | chr2_3:7651961-7651980 | Msa0275560:CDS | 25.0% |
| ! | ATTTGGACAATTCATGAAAA+GGG | + | chr2_3:7652122-7652141 | None:intergenic | 25.0% |
| ! | AATTTGGACAATTCATGAAA+AGG | + | chr2_3:7652123-7652142 | None:intergenic | 25.0% |
| ! | TTGTCAATAGACAATAAAGA+AGG | + | chr2_3:7652276-7652295 | None:intergenic | 25.0% |
| !! | AGGACTAATTGTACTAATTT+TGG | + | chr2_3:7652316-7652335 | None:intergenic | 25.0% |
| !!! | GTTTTGGTAAATGACATTTT+TGG | + | chr2_3:7652597-7652616 | None:intergenic | 25.0% |
| ! | ACCAAAACTTCAATTGTTAT+CGG | - | chr2_3:7652609-7652628 | Msa0275560:CDS | 25.0% |
| TTTCTTGATAGGAAGAATGA+AGG | + | chr2_3:7651548-7651567 | None:intergenic | 30.0% | |
| ! | TGTAGAATAGATTGGTTGAT+GGG | + | chr2_3:7651573-7651592 | None:intergenic | 30.0% |
| AACAGATGTGTAGAATAGAT+TGG | + | chr2_3:7651581-7651600 | None:intergenic | 30.0% | |
| AATCTATTCTACACATCTGT+TGG | - | chr2_3:7651580-7651599 | Msa0275560:CDS | 30.0% | |
| ! | GCTAGGTTAAAATTTGTTCT+AGG | + | chr2_3:7651616-7651635 | None:intergenic | 30.0% |
| ! | AATCCTTGTTTGTTTGAAGA+AGG | + | chr2_3:7652066-7652085 | None:intergenic | 30.0% |
| AGGATTAATAATTAGTGGTG+TGG | + | chr2_3:7652154-7652173 | None:intergenic | 30.0% | |
| TCTATTGACAAAAAGGGAAA+CGG | - | chr2_3:7652285-7652304 | Msa0275560:CDS | 30.0% | |
| TTGAGGAAATCACGAATAAA+TGG | + | chr2_3:7652369-7652388 | None:intergenic | 30.0% | |
| TATTCGTGATTTCCTCAAAA+AGG | - | chr2_3:7652371-7652390 | Msa0275560:CDS | 30.0% | |
| AGATAGAAAACTAAAGAGAG+TGG | - | chr2_3:7652398-7652417 | Msa0275560:CDS | 30.0% | |
| TATTCATGAAGCCAATTTGA+TGG | - | chr2_3:7652518-7652537 | Msa0275560:CDS | 30.0% | |
| CTTTACAGTAACCATCAAAT+TGG | + | chr2_3:7652532-7652551 | None:intergenic | 30.0% | |
| AAGAAAAATGTAGCATGTCT+TGG | - | chr2_3:7652549-7652568 | Msa0275560:CDS | 30.0% | |
| ! | ACCGATAACAATTGAAGTTT+TGG | + | chr2_3:7652613-7652632 | None:intergenic | 30.0% |
| AAAACTTCAATTGTTATCGG+TGG | - | chr2_3:7652612-7652631 | Msa0275560:CDS | 30.0% | |
| TTTCTTGATAGGAAGAATGA+AGG | + | chr2_3:7651548-7651567 | None:intergenic | 30.0% | |
| ! | TGTAGAATAGATTGGTTGAT+GGG | + | chr2_3:7651573-7651592 | None:intergenic | 30.0% |
| AACAGATGTGTAGAATAGAT+TGG | + | chr2_3:7651581-7651600 | None:intergenic | 30.0% | |
| AATCTATTCTACACATCTGT+TGG | - | chr2_3:7651580-7651599 | Msa0275560:CDS | 30.0% | |
| ! | GCTAGGTTAAAATTTGTTCT+AGG | + | chr2_3:7651616-7651635 | None:intergenic | 30.0% |
| ! | AATCCTTGTTTGTTTGAAGA+AGG | + | chr2_3:7652066-7652085 | None:intergenic | 30.0% |
| AGGATTAATAATTAGTGGTG+TGG | + | chr2_3:7652154-7652173 | None:intergenic | 30.0% | |
| TCTATTGACAAAAAGGGAAA+CGG | - | chr2_3:7652285-7652304 | Msa0275560:CDS | 30.0% | |
| TTGAGGAAATCACGAATAAA+TGG | + | chr2_3:7652369-7652388 | None:intergenic | 30.0% | |
| TATTCGTGATTTCCTCAAAA+AGG | - | chr2_3:7652371-7652390 | Msa0275560:CDS | 30.0% | |
| AGATAGAAAACTAAAGAGAG+TGG | - | chr2_3:7652398-7652417 | Msa0275560:CDS | 30.0% | |
| TATTCATGAAGCCAATTTGA+TGG | - | chr2_3:7652518-7652537 | Msa0275560:CDS | 30.0% | |
| CTTTACAGTAACCATCAAAT+TGG | + | chr2_3:7652532-7652551 | None:intergenic | 30.0% | |
| AAGAAAAATGTAGCATGTCT+TGG | - | chr2_3:7652549-7652568 | Msa0275560:CDS | 30.0% | |
| ! | ACCGATAACAATTGAAGTTT+TGG | + | chr2_3:7652613-7652632 | None:intergenic | 30.0% |
| AAAACTTCAATTGTTATCGG+TGG | - | chr2_3:7652612-7652631 | Msa0275560:CDS | 30.0% | |
| CTAGTGATATGAGGAAGAAA+TGG | + | chr2_3:7651468-7651487 | None:intergenic | 35.0% | |
| !!! | AAGGATTGTGGTTTTGTAGT+AGG | + | chr2_3:7651529-7651548 | None:intergenic | 35.0% |
| ATAGGAAGAATGAAGGATTG+TGG | + | chr2_3:7651541-7651560 | None:intergenic | 35.0% | |
| ! | GTGTAGAATAGATTGGTTGA+TGG | + | chr2_3:7651574-7651593 | None:intergenic | 35.0% |
| !!! | GCTAAATTCATTTTTGGTGG+TGG | - | chr2_3:7651817-7651836 | Msa0275560:CDS | 35.0% |
| ! | TCTAGTTGCATTGACATTGA+TGG | - | chr2_3:7651892-7651911 | Msa0275560:CDS | 35.0% |
| !!! | TTTTTTGGTAACCCATTGAG+TGG | + | chr2_3:7651946-7651965 | None:intergenic | 35.0% |
| GGGTTACCAAAAAACACTAA+AGG | - | chr2_3:7651952-7651971 | Msa0275560:CDS | 35.0% | |
| GGCAAACAAAGAGAGAATTT+AGG | + | chr2_3:7652045-7652064 | None:intergenic | 35.0% | |
| TTGCCTTCTTCAAACAAACA+AGG | - | chr2_3:7652060-7652079 | Msa0275560:CDS | 35.0% | |
| TGGTGTGGTTTGAACAAATT+TGG | + | chr2_3:7652139-7652158 | None:intergenic | 35.0% | |
| GGGACAGGATTAATAATTAG+TGG | + | chr2_3:7652159-7652178 | None:intergenic | 35.0% | |
| ATTATTAATCCTGTCCCAAC+AGG | - | chr2_3:7652162-7652181 | Msa0275560:CDS | 35.0% | |
| GTGAAAGAGGTTAAGATTGA+CGG | - | chr2_3:7652231-7652250 | Msa0275560:CDS | 35.0% | |
| GAAGTTTGCAATTCAGTGAA+AGG | + | chr2_3:7652336-7652355 | None:intergenic | 35.0% | |
| !! | TTCTATCTGAAGCCTTTTTG+AGG | + | chr2_3:7652386-7652405 | None:intergenic | 35.0% |
| ! | TCAATTGGAGGACAATCTTT+TGG | - | chr2_3:7652638-7652657 | Msa0275560:CDS | 35.0% |
| CTAGTGATATGAGGAAGAAA+TGG | + | chr2_3:7651468-7651487 | None:intergenic | 35.0% | |
| !!! | AAGGATTGTGGTTTTGTAGT+AGG | + | chr2_3:7651529-7651548 | None:intergenic | 35.0% |
| ATAGGAAGAATGAAGGATTG+TGG | + | chr2_3:7651541-7651560 | None:intergenic | 35.0% | |
| ! | GTGTAGAATAGATTGGTTGA+TGG | + | chr2_3:7651574-7651593 | None:intergenic | 35.0% |
| !!! | GCTAAATTCATTTTTGGTGG+TGG | - | chr2_3:7651817-7651836 | Msa0275560:CDS | 35.0% |
| ! | TCTAGTTGCATTGACATTGA+TGG | - | chr2_3:7651892-7651911 | Msa0275560:CDS | 35.0% |
| !!! | TTTTTTGGTAACCCATTGAG+TGG | + | chr2_3:7651946-7651965 | None:intergenic | 35.0% |
| GGGTTACCAAAAAACACTAA+AGG | - | chr2_3:7651952-7651971 | Msa0275560:CDS | 35.0% | |
| GGCAAACAAAGAGAGAATTT+AGG | + | chr2_3:7652045-7652064 | None:intergenic | 35.0% | |
| TTGCCTTCTTCAAACAAACA+AGG | - | chr2_3:7652060-7652079 | Msa0275560:CDS | 35.0% | |
| TGGTGTGGTTTGAACAAATT+TGG | + | chr2_3:7652139-7652158 | None:intergenic | 35.0% | |
| GGGACAGGATTAATAATTAG+TGG | + | chr2_3:7652159-7652178 | None:intergenic | 35.0% | |
| ATTATTAATCCTGTCCCAAC+AGG | - | chr2_3:7652162-7652181 | Msa0275560:CDS | 35.0% | |
| GTGAAAGAGGTTAAGATTGA+CGG | - | chr2_3:7652231-7652250 | Msa0275560:CDS | 35.0% | |
| GAAGTTTGCAATTCAGTGAA+AGG | + | chr2_3:7652336-7652355 | None:intergenic | 35.0% | |
| !! | TTCTATCTGAAGCCTTTTTG+AGG | + | chr2_3:7652386-7652405 | None:intergenic | 35.0% |
| ! | TCAATTGGAGGACAATCTTT+TGG | - | chr2_3:7652638-7652657 | Msa0275560:CDS | 35.0% |
| ! | AGAAAAGGGCTAGTGATATG+AGG | + | chr2_3:7651477-7651496 | None:intergenic | 40.0% |
| !!! | GATTGTGGTTTTGTAGTAGG+AGG | + | chr2_3:7651526-7651545 | None:intergenic | 40.0% |
| ! | GTTGATGGGTCTTTCTTGAT+AGG | + | chr2_3:7651559-7651578 | None:intergenic | 40.0% |
| TTCTACACATCTGTTGGCAT+AGG | - | chr2_3:7651586-7651605 | Msa0275560:CDS | 40.0% | |
| ! | GTTTTCTCCAGCAAGATCAA+TGG | + | chr2_3:7651638-7651657 | None:intergenic | 40.0% |
| ATCTTGCTGGAGAAAACCTA+TGG | - | chr2_3:7651641-7651660 | Msa0275560:CDS | 40.0% | |
| GAGTGTCACAATCATACCAT+AGG | + | chr2_3:7651660-7651679 | None:intergenic | 40.0% | |
| TCCTACACTCCTATTCAATG+TGG | - | chr2_3:7651694-7651713 | Msa0275560:CDS | 40.0% | |
| CTTGTTGAGCCACATTGAAT+AGG | + | chr2_3:7651706-7651725 | None:intergenic | 40.0% | |
| TGTACAGATACTGCATGTGT+TGG | - | chr2_3:7651727-7651746 | Msa0275560:CDS | 40.0% | |
| !!! | TTCATTTTTGGTGGTGGTCT+TGG | - | chr2_3:7651823-7651842 | Msa0275560:CDS | 40.0% |
| AGGATGATTCACCACTCAAT+GGG | - | chr2_3:7651932-7651951 | Msa0275560:CDS | 40.0% | |
| !! | CAAGCTGAGTTGGTAATGAA+AGG | + | chr2_3:7652002-7652021 | None:intergenic | 40.0% |
| TTCTTCAATGCAAGCTGAGT+TGG | + | chr2_3:7652012-7652031 | None:intergenic | 40.0% | |
| AACTGATCCAACAAGCAAGT+TGG | + | chr2_3:7652091-7652110 | None:intergenic | 40.0% | |
| ! | AACTTGCTTGTTGGATCAGT+TGG | - | chr2_3:7652090-7652109 | Msa0275560:CDS | 40.0% |
| GAACAGAAATAGCACCTGTT+GGG | + | chr2_3:7652179-7652198 | None:intergenic | 40.0% | |
| TGAACAGAAATAGCACCTGT+TGG | + | chr2_3:7652180-7652199 | None:intergenic | 40.0% | |
| !! | ACAGGTGCTATTTCTGTTCA+AGG | - | chr2_3:7652180-7652199 | Msa0275560:CDS | 40.0% |
| ATTGACAAAAAGGGAAACGG+TGG | - | chr2_3:7652288-7652307 | Msa0275560:CDS | 40.0% | |
| ACTAAAGAGAGTGGAATCAG+TGG | - | chr2_3:7652407-7652426 | Msa0275560:CDS | 40.0% | |
| GAGTCAAAACATGCCTCAAA+TGG | + | chr2_3:7652435-7652454 | None:intergenic | 40.0% | |
| TGAAGCACAAGATCAACTCT+TGG | + | chr2_3:7652480-7652499 | None:intergenic | 40.0% | |
| ! | AGAGTTGATCTTGTGCTTCA+AGG | - | chr2_3:7652480-7652499 | Msa0275560:CDS | 40.0% |
| TTGATCTTGTGCTTCAAGGT+GGG | - | chr2_3:7652484-7652503 | Msa0275560:CDS | 40.0% | |
| !! | GCATGTCTTGGATTTGTTGA+TGG | - | chr2_3:7652561-7652580 | Msa0275560:CDS | 40.0% |
| !! | TGTCTTGGATTTGTTGATGG+AGG | - | chr2_3:7652564-7652583 | Msa0275560:CDS | 40.0% |
| !! | GTCTTGGATTTGTTGATGGA+GGG | - | chr2_3:7652565-7652584 | Msa0275560:CDS | 40.0% |
| TGTTATCGGTGGACATCAAT+TGG | - | chr2_3:7652623-7652642 | Msa0275560:CDS | 40.0% | |
| TGAGGAACTGAAGCTCAATT+TGG | + | chr2_3:7652682-7652701 | None:intergenic | 40.0% | |
| ! | AGAAAAGGGCTAGTGATATG+AGG | + | chr2_3:7651477-7651496 | None:intergenic | 40.0% |
| !!! | GATTGTGGTTTTGTAGTAGG+AGG | + | chr2_3:7651526-7651545 | None:intergenic | 40.0% |
| ! | GTTGATGGGTCTTTCTTGAT+AGG | + | chr2_3:7651559-7651578 | None:intergenic | 40.0% |
| TTCTACACATCTGTTGGCAT+AGG | - | chr2_3:7651586-7651605 | Msa0275560:CDS | 40.0% | |
| ! | GTTTTCTCCAGCAAGATCAA+TGG | + | chr2_3:7651638-7651657 | None:intergenic | 40.0% |
| ATCTTGCTGGAGAAAACCTA+TGG | - | chr2_3:7651641-7651660 | Msa0275560:CDS | 40.0% | |
| GAGTGTCACAATCATACCAT+AGG | + | chr2_3:7651660-7651679 | None:intergenic | 40.0% | |
| TCCTACACTCCTATTCAATG+TGG | - | chr2_3:7651694-7651713 | Msa0275560:CDS | 40.0% | |
| CTTGTTGAGCCACATTGAAT+AGG | + | chr2_3:7651706-7651725 | None:intergenic | 40.0% | |
| TGTACAGATACTGCATGTGT+TGG | - | chr2_3:7651727-7651746 | Msa0275560:CDS | 40.0% | |
| !!! | TTCATTTTTGGTGGTGGTCT+TGG | - | chr2_3:7651823-7651842 | Msa0275560:CDS | 40.0% |
| AGGATGATTCACCACTCAAT+GGG | - | chr2_3:7651932-7651951 | Msa0275560:CDS | 40.0% | |
| !! | CAAGCTGAGTTGGTAATGAA+AGG | + | chr2_3:7652002-7652021 | None:intergenic | 40.0% |
| TTCTTCAATGCAAGCTGAGT+TGG | + | chr2_3:7652012-7652031 | None:intergenic | 40.0% | |
| AACTGATCCAACAAGCAAGT+TGG | + | chr2_3:7652091-7652110 | None:intergenic | 40.0% | |
| ! | AACTTGCTTGTTGGATCAGT+TGG | - | chr2_3:7652090-7652109 | Msa0275560:CDS | 40.0% |
| GAACAGAAATAGCACCTGTT+GGG | + | chr2_3:7652179-7652198 | None:intergenic | 40.0% | |
| TGAACAGAAATAGCACCTGT+TGG | + | chr2_3:7652180-7652199 | None:intergenic | 40.0% | |
| !! | ACAGGTGCTATTTCTGTTCA+AGG | - | chr2_3:7652180-7652199 | Msa0275560:CDS | 40.0% |
| ATTGACAAAAAGGGAAACGG+TGG | - | chr2_3:7652288-7652307 | Msa0275560:CDS | 40.0% | |
| ACTAAAGAGAGTGGAATCAG+TGG | - | chr2_3:7652407-7652426 | Msa0275560:CDS | 40.0% | |
| GAGTCAAAACATGCCTCAAA+TGG | + | chr2_3:7652435-7652454 | None:intergenic | 40.0% | |
| TGAAGCACAAGATCAACTCT+TGG | + | chr2_3:7652480-7652499 | None:intergenic | 40.0% | |
| ! | AGAGTTGATCTTGTGCTTCA+AGG | - | chr2_3:7652480-7652499 | Msa0275560:CDS | 40.0% |
| TTGATCTTGTGCTTCAAGGT+GGG | - | chr2_3:7652484-7652503 | Msa0275560:CDS | 40.0% | |
| !! | GCATGTCTTGGATTTGTTGA+TGG | - | chr2_3:7652561-7652580 | Msa0275560:CDS | 40.0% |
| !! | TGTCTTGGATTTGTTGATGG+AGG | - | chr2_3:7652564-7652583 | Msa0275560:CDS | 40.0% |
| !! | GTCTTGGATTTGTTGATGGA+GGG | - | chr2_3:7652565-7652584 | Msa0275560:CDS | 40.0% |
| TGTTATCGGTGGACATCAAT+TGG | - | chr2_3:7652623-7652642 | Msa0275560:CDS | 40.0% | |
| TGAGGAACTGAAGCTCAATT+TGG | + | chr2_3:7652682-7652701 | None:intergenic | 40.0% | |
| AACCTAGCCATTGATCTTGC+TGG | - | chr2_3:7651628-7651647 | Msa0275560:CDS | 45.0% | |
| ! | GCCACATTGAATAGGAGTGT+AGG | + | chr2_3:7651698-7651717 | None:intergenic | 45.0% |
| ! | TTGTGCAACCTGGCTTGAAT+GGG | + | chr2_3:7651762-7651781 | None:intergenic | 45.0% |
| ! | TTTGTGCAACCTGGCTTGAA+TGG | + | chr2_3:7651763-7651782 | None:intergenic | 45.0% |
| !! | CATGTGTTGTTTGTGCAACC+TGG | + | chr2_3:7651772-7651791 | None:intergenic | 45.0% |
| ! | TGGATTTTCATCAACCGCTG+AGG | - | chr2_3:7651912-7651931 | Msa0275560:CDS | 45.0% |
| GAGGATGATTCACCACTCAA+TGG | - | chr2_3:7651931-7651950 | Msa0275560:CDS | 45.0% | |
| ! | GGATTCACCAACTTGCTTGT+TGG | - | chr2_3:7652081-7652100 | Msa0275560:CDS | 45.0% |
| ! | TTGCTTGTTGGATCAGTTGG+TGG | - | chr2_3:7652093-7652112 | Msa0275560:CDS | 45.0% |
| GTTGATCTTGTGCTTCAAGG+TGG | - | chr2_3:7652483-7652502 | Msa0275560:CDS | 45.0% | |
| TGATCTTGTGCTTCAAGGTG+GGG | - | chr2_3:7652485-7652504 | Msa0275560:CDS | 45.0% | |
| TATCGGTGGACATCAATTGG+AGG | - | chr2_3:7652626-7652645 | Msa0275560:CDS | 45.0% | |
| ! | GAGCTTCAGTTCCTCACTTT+TGG | - | chr2_3:7652686-7652705 | Msa0275560:CDS | 45.0% |
| TGCATTGTGGACCAAAAGTG+AGG | + | chr2_3:7652700-7652719 | None:intergenic | 45.0% | |
| AACCTAGCCATTGATCTTGC+TGG | - | chr2_3:7651628-7651647 | Msa0275560:CDS | 45.0% | |
| ! | GCCACATTGAATAGGAGTGT+AGG | + | chr2_3:7651698-7651717 | None:intergenic | 45.0% |
| ! | TTGTGCAACCTGGCTTGAAT+GGG | + | chr2_3:7651762-7651781 | None:intergenic | 45.0% |
| ! | TTTGTGCAACCTGGCTTGAA+TGG | + | chr2_3:7651763-7651782 | None:intergenic | 45.0% |
| !! | CATGTGTTGTTTGTGCAACC+TGG | + | chr2_3:7651772-7651791 | None:intergenic | 45.0% |
| ! | TGGATTTTCATCAACCGCTG+AGG | - | chr2_3:7651912-7651931 | Msa0275560:CDS | 45.0% |
| GAGGATGATTCACCACTCAA+TGG | - | chr2_3:7651931-7651950 | Msa0275560:CDS | 45.0% | |
| ! | GGATTCACCAACTTGCTTGT+TGG | - | chr2_3:7652081-7652100 | Msa0275560:CDS | 45.0% |
| ! | TTGCTTGTTGGATCAGTTGG+TGG | - | chr2_3:7652093-7652112 | Msa0275560:CDS | 45.0% |
| GTTGATCTTGTGCTTCAAGG+TGG | - | chr2_3:7652483-7652502 | Msa0275560:CDS | 45.0% | |
| TGATCTTGTGCTTCAAGGTG+GGG | - | chr2_3:7652485-7652504 | Msa0275560:CDS | 45.0% | |
| TATCGGTGGACATCAATTGG+AGG | - | chr2_3:7652626-7652645 | Msa0275560:CDS | 45.0% | |
| ! | GAGCTTCAGTTCCTCACTTT+TGG | - | chr2_3:7652686-7652705 | Msa0275560:CDS | 45.0% |
| TGCATTGTGGACCAAAAGTG+AGG | + | chr2_3:7652700-7652719 | None:intergenic | 45.0% | |
| CTCCAGCAAGATCAATGGCT+AGG | + | chr2_3:7651633-7651652 | None:intergenic | 50.0% | |
| !! | ACTGCATGTGTTGGCTGCAA+TGG | - | chr2_3:7651736-7651755 | Msa0275560:CDS | 50.0% |
| GAGTGGTGAATCATCCTCAG+CGG | + | chr2_3:7651929-7651948 | None:intergenic | 50.0% | |
| GAAATAGCACCTGTTGGGAC+AGG | + | chr2_3:7652174-7652193 | None:intergenic | 50.0% | |
| GGAATCAGTGGCACCATTTG+AGG | - | chr2_3:7652419-7652438 | Msa0275560:CDS | 50.0% | |
| CTCCAGCAAGATCAATGGCT+AGG | + | chr2_3:7651633-7651652 | None:intergenic | 50.0% | |
| !! | ACTGCATGTGTTGGCTGCAA+TGG | - | chr2_3:7651736-7651755 | Msa0275560:CDS | 50.0% |
| GAGTGGTGAATCATCCTCAG+CGG | + | chr2_3:7651929-7651948 | None:intergenic | 50.0% | |
| GAAATAGCACCTGTTGGGAC+AGG | + | chr2_3:7652174-7652193 | None:intergenic | 50.0% | |
| GGAATCAGTGGCACCATTTG+AGG | - | chr2_3:7652419-7652438 | Msa0275560:CDS | 50.0% | |
| TGCAATGGCCCATTCAAGCC+AGG | - | chr2_3:7651751-7651770 | Msa0275560:CDS | 55.0% | |
| TGCAATGGCCCATTCAAGCC+AGG | - | chr2_3:7651751-7651770 | Msa0275560:CDS | 55.0% | |
| TGCTTCAAGGTGGGGTGCAG+TGG | - | chr2_3:7652493-7652512 | Msa0275560:CDS | 60.0% | |
| TGCTTCAAGGTGGGGTGCAG+TGG | - | chr2_3:7652493-7652512 | Msa0275560:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 7651442 | 7652731 | 7651442 | ID=Msa0275560;Name=Msa0275560 |
| chr2_3 | mRNA | 7651442 | 7652731 | 7651442 | ID=Msa0275560-mRNA-1;Parent=Msa0275560;Name=Msa0275560-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|429 |
| chr2_3 | exon | 7651442 | 7652731 | 7651442 | ID=Msa0275560-mRNA-1:exon:3488;Parent=Msa0275560-mRNA-1 |
| chr2_3 | CDS | 7651442 | 7652731 | 7651442 | ID=Msa0275560-mRNA-1:cds;Parent=Msa0275560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
