AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1275820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1275820 MtrunA17_Chr8g0342891 94.316 862 46 2 1 860 1 861 0.0 1691
Msa1275820 MtrunA17_Chr8g0342921 82.326 860 146 2 6 860 11 869 0.0 1494
Msa1275820 MtrunA17_Chr8g0342971 79.838 863 167 4 4 860 9 870 0.0 1456
Msa1275820 MtrunA17_Chr8g0342951 80.092 869 163 3 1 860 1 868 0.0 1446
Msa1275820 MtrunA17_Chr8g0344211 77.445 869 186 3 1 860 1 868 0.0 1423
Msa1275820 MtrunA17_Chr8g0343011 77.038 871 183 4 1 860 1 865 0.0 1406
Msa1275820 MtrunA17_Chr8g0342931 85.087 751 111 1 110 860 1 750 0.0 1355
Msa1275820 MtrunA17_Chr8g0342901 76.620 864 154 8 4 860 6 828 0.0 1337
Msa1275820 MtrunA17_Chr2g0329911 68.858 867 257 6 1 860 1 861 0.0 1251
Msa1275820 MtrunA17_Chr8g0342881 67.368 855 273 3 7 860 7 856 0.0 1225
Msa1275820 MtrunA17_Chr2g0329901 64.610 859 298 4 4 860 9 863 0.0 1180
Msa1275820 MtrunA17_Chr5g0406871 64.138 870 296 7 1 860 4 867 0.0 1174
Msa1275820 MtrunA17_Chr8g0343031 62.269 864 313 6 5 860 7 865 0.0 1143
Msa1275820 MtrunA17_Chr8g0343021 61.751 868 320 7 1 860 1 864 0.0 1143
Msa1275820 MtrunA17_Chr3g0120071 61.234 859 326 6 4 860 5 858 0.0 1121
Msa1275820 MtrunA17_Chr8g0342991 63.573 862 257 9 1 860 1 807 0.0 1116
Msa1275820 MtrunA17_Chr8g0343001 62.645 862 265 9 1 860 1 807 0.0 1101
Msa1275820 MtrunA17_Chr8g0342981 62.697 823 261 11 53 860 32 823 0.0 1043
Msa1275820 MtrunA17_Chr1g0191921 58.053 863 331 9 8 860 17 858 0.0 1006
Msa1275820 MtrunA17_Chr7g0272791 56.597 864 342 10 10 860 24 867 0.0 993
Msa1275820 MtrunA17_Chr1g0205611 55.184 868 352 10 10 860 9 856 0.0 981
Msa1275820 MtrunA17_Chr8g0344201 45.000 820 437 10 48 859 113 926 0.0 718
Msa1275820 MtrunA17_Chr8g0344241 81.519 395 73 0 466 860 67 461 0.0 694
Msa1275820 MtrunA17_Chr8g0344241 71.667 60 17 0 285 344 9 68 3.94e-20 94.4
Msa1275820 MtrunA17_Chr3g0118651 42.874 828 432 14 52 860 98 903 0.0 649
Msa1275820 MtrunA17_Chr3g0118641 43.557 776 418 12 96 860 136 902 0.0 636
Msa1275820 MtrunA17_Chr4g0047281 42.540 811 427 12 58 859 114 894 0.0 636
Msa1275820 MtrunA17_Chr8g0377101 41.869 824 445 14 55 860 109 916 0.0 635
Msa1275820 MtrunA17_Chr8g0338451 40.534 824 444 13 47 843 46 850 0.0 623
Msa1275820 MtrunA17_Chr4g0033171 44.475 724 376 12 150 860 15 725 0.0 609
Msa1275820 MtrunA17_Chr3g0118621 42.162 842 445 15 39 860 46 865 0.0 602
Msa1275820 MtrunA17_Chr6g0471951 39.804 510 260 8 313 818 11 477 1.21e-124 384
Msa1275820 MtrunA17_Chr7g0218231 62.393 117 43 1 514 629 16 132 1.43e-42 151
Msa1275820 MtrunA17_Chr6g0468081 58.427 89 36 1 542 629 1 89 4.33e-27 105
Msa1275820 MtrunA17_Chr4g0047271 39.560 91 55 0 769 859 1 91 1.89e-16 75.5
Msa1275820 MtrunA17_Chr3g0137991 39.370 127 57 4 736 860 1 109 1.47e-15 73.6
Msa1275820 MtrunA17_Chr2g0277191 51.786 56 27 0 733 788 58 113 3.35e-13 67.0
Msa1275820 MtrunA17_Chr7g0272781 44.444 63 34 1 752 814 8 69 1.65e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1275820 AT1G55020.1 54.325 867 358 11 7 860 18 859 0.0 979
Msa1275820 AT3G22400.1 53.714 875 364 12 7 860 32 886 0.0 956
Msa1275820 AT1G72520.1 43.484 821 448 9 48 860 114 926 0.0 708
Msa1275820 AT1G17420.1 43.325 824 444 10 48 860 108 919 0.0 701
Msa1275820 AT3G45140.1 42.012 845 446 18 33 860 79 896 0.0 632
Msa1275820 AT3G45140.2 43.750 768 399 16 109 860 4 754 0.0 620
Msa1275820 AT1G67560.1 41.475 827 457 15 48 860 104 917 0.0 612

Find 222 sgRNAs with CRISPR-Local

Find 614 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCATGCAGCTGTTAATTT+TGG 0.155837 8_3:-10000957 Msa1275820:CDS
ATTCTGAACTCCAAGCATTT+TGG 0.213611 8_3:-10001097 Msa1275820:CDS
CTATAATGGTCAAGTCAATT+AGG 0.235454 8_3:+10000790 None:intergenic
ATATCATTAGAAACATTTAA+TGG 0.260713 8_3:+10004788 None:intergenic
GTTACCTCCGCACCGATTCT+AGG 0.266335 8_3:-10003830 Msa1275820:CDS
TAGTCCAAACTCTTACTTTA+GGG 0.267766 8_3:-10004633 Msa1275820:five_prime_UTR
TCACTGTCCCCTTCACCTTT+TGG 0.268716 8_3:+10004355 None:intergenic
TGCCTATCTAGCTTGCTCTT+TGG 0.284977 8_3:+10002361 None:intergenic
ATAGTCCAAACTCTTACTTT+AGG 0.294163 8_3:-10004634 Msa1275820:five_prime_UTR
AATAGTATCTCCATCTAAAA+AGG 0.294205 8_3:-10000519 Msa1275820:exon
TTAGAGGCTTTCAAGAGATT+TGG 0.301087 8_3:-10000684 Msa1275820:CDS
AGCTTAGCTCGTCCCGTTAT+TGG 0.301482 8_3:-10003346 Msa1275820:CDS
GATTGATTGTTATAGTGTTT+TGG 0.302080 8_3:-10000404 Msa1275820:three_prime_UTR
CTGCAGATGGATTAGAGATA+TGG 0.306273 8_3:-10001190 Msa1275820:CDS
AGAGAATTGAAGGTGATCTT+TGG 0.324769 8_3:-10000725 Msa1275820:CDS
TGGATACCTTGAATGACTTT+AGG 0.334103 8_3:+10002684 None:intergenic
TTCTGATTCACAACCATTAG+AGG 0.338910 8_3:-10000700 Msa1275820:CDS
AGTTCCTTGAACAACGGTAT+AGG 0.342436 8_3:+10002747 None:intergenic
CTTTAGGTGGTGGAAACTTA+AGG 0.346113 8_3:+10002700 None:intergenic
ATCTAGAGGTGTGGCTCTTA+AGG 0.350357 8_3:-10001264 Msa1275820:intron
CTGTTCTTTGGTTATTGTGC+TGG 0.354337 8_3:+10002321 None:intergenic
GGACTATATATCTTATGTTT+CGG 0.355812 8_3:+10004650 None:intergenic
ACAGGTGGATTCAAGGTTCT+TGG 0.357260 8_3:-10004276 Msa1275820:CDS
GGAATAATGATGAGACTCTA+AGG 0.359551 8_3:-10000623 Msa1275820:CDS
TGCTGTATTATATAAGGATT+GGG 0.361705 8_3:-10001554 Msa1275820:CDS
ATTGTCTGCTGTATTATATA+AGG 0.364894 8_3:-10001560 Msa1275820:CDS
TGACACCTACGGTTCAATCT+TGG 0.367124 8_3:-10004232 Msa1275820:CDS
CTTCCAAGAGATGAATCATT+TGG 0.368825 8_3:-10002954 Msa1275820:CDS
TCTTGTCTATAGTAGACTAA+TGG 0.377121 8_3:+10003475 None:intergenic
TGAGTTGCAAACAAAGTTGA+TGG 0.379958 8_3:+10003667 None:intergenic
CATTCATCATAGCAACAAAT+AGG 0.380660 8_3:-10001729 Msa1275820:CDS
ACACTTGCACCACCCTCATA+TGG 0.380883 8_3:-10000992 Msa1275820:CDS
GACACCTACGGTTCAATCTT+GGG 0.384321 8_3:-10004231 Msa1275820:CDS
TGACCAAATGATTCATCTCT+TGG 0.388343 8_3:+10002951 None:intergenic
GGAGCCCTAAAGTAAGAGTT+TGG 0.389028 8_3:+10004629 None:intergenic
CAAGAGATTTGGAACAAAGT+TGG 0.394650 8_3:-10000673 Msa1275820:CDS
CTGCTGTATTATATAAGGAT+TGG 0.398026 8_3:-10001555 Msa1275820:CDS
ATCAAGTATGTACAATTTGT+TGG 0.404374 8_3:+10002137 None:intergenic
GGAAAGTAAATATCACTAAC+AGG 0.406097 8_3:+10001955 None:intergenic
TTTAGGTGGTGGAAACTTAA+GGG 0.406321 8_3:+10002701 None:intergenic
CAAGTTCTTTCCAAAATGCT+TGG 0.406902 8_3:+10001087 None:intergenic
TCTAATCCATCTGCAGCATA+AGG 0.407144 8_3:+10001197 None:intergenic
AAAGTGCAAAACAAATTTGC+TGG 0.409435 8_3:-10004411 Msa1275820:five_prime_UTR
TATAATGGTCAAGTCAATTA+GGG 0.409856 8_3:+10000791 None:intergenic
GCTTCAACACCATCACTTGC+AGG 0.410303 8_3:+10001934 None:intergenic
ATAGTAAGTGTTGCAATTCA+TGG 0.411489 8_3:+10004515 None:intergenic
GAAGGATAAAGCAAAGTATA+CGG 0.412453 8_3:+10000576 None:intergenic
GAGACTCTAAGGAATCGATA+TGG 0.416853 8_3:-10000612 Msa1275820:CDS
GTCAATCCTTCCTCACTTGA+AGG 0.416919 8_3:+10000558 None:intergenic
GTTCCTTGAACAACGGTATA+GGG 0.417622 8_3:+10002748 None:intergenic
AATCTCTTGAAAGCCTCTAA+TGG 0.418384 8_3:+10000687 None:intergenic
CATCCTCAGGCTGATAGCTT+TGG 0.418449 8_3:-10001979 Msa1275820:CDS
AAAGTATACGGCATCTTAAC+CGG 0.420728 8_3:+10000588 None:intergenic
CTATTTGTTGCTATGATGAA+TGG 0.420998 8_3:+10001730 None:intergenic
AATAGCAACTTGCAAGCCAC+TGG 0.421553 8_3:-10004461 Msa1275820:five_prime_UTR
AGTTTGCTAAGTTCATTAGT+AGG 0.422127 8_3:+10002774 None:intergenic
AAGCTATCAGCCTGAGGATG+TGG 0.423011 8_3:+10001982 None:intergenic
CTATCTAGCTTGCTCTTTGG+TGG 0.425209 8_3:+10002364 None:intergenic
CAACCATCAATGTAACTAAA+GGG 0.425870 8_3:+10004569 None:intergenic
GATAGTGACATGGGAATTCC+AGG 0.428040 8_3:-10003770 Msa1275820:CDS
TAGCCCTATACCGTTGTTCA+AGG 0.430006 8_3:-10002751 Msa1275820:CDS
CACCAAAGAGCAAGCTAGAT+AGG 0.433954 8_3:-10002363 Msa1275820:CDS
TCAACTTTGTTTGCAACTCA+TGG 0.435514 8_3:-10003664 Msa1275820:CDS
TTACATTGATGGTTGACCTT+AGG 0.435759 8_3:-10004561 Msa1275820:five_prime_UTR
AAGTTGATGGTTCCATGGTT+AGG 0.438897 8_3:+10003680 None:intergenic
TGATGGAACTTTGAAGCCAT+TGG 0.439270 8_3:-10002022 Msa1275820:CDS
AGAAAGTGGAAAAGGTAAAG+TGG 0.439449 8_3:-10003879 Msa1275820:CDS
CCACCACCTAAAGTCATTCA+AGG 0.440711 8_3:-10002690 Msa1275820:intron
ACACATCATCAAAAGAATTC+AGG 0.441238 8_3:-10002516 Msa1275820:intron
AGTTTATAACCTTTCTTAGC+TGG 0.442387 8_3:+10003274 None:intergenic
TCTTGACAAGACCTCTATAA+TGG 0.447317 8_3:+10000776 None:intergenic
TGGGCCGTTCAGTGGCTCTC+AGG 0.448781 8_3:-10004212 Msa1275820:CDS
TATTGAGAAGACGTTCTTGA+TGG 0.451460 8_3:-10001599 Msa1275820:CDS
TTCTCAATATAAAATGCTCC+TGG 0.455625 8_3:+10003752 None:intergenic
TTTACAAGAGAGATGATTGC+TGG 0.455862 8_3:-10002548 Msa1275820:CDS
AAATATCACAGGTGGATTCA+AGG 0.457407 8_3:-10004283 Msa1275820:CDS
CTTAGAAAGCTCATCATACT+CGG 0.462104 8_3:+10000860 None:intergenic
TAATAACATGACCATGGATA+GGG 0.462761 8_3:+10000440 None:intergenic
CGGCCTTCGCCTTCTGATAG+AGG 0.462912 8_3:-10001225 Msa1275820:CDS
CTCTAACCTGTGCGATGCAC+GGG 0.471034 8_3:+10004729 None:intergenic
AAAGCTGCATTTGAAATCAA+TGG 0.475603 8_3:+10000330 None:intergenic
ATGACCATGGATAGGGGTTG+AGG 0.475928 8_3:+10000447 None:intergenic
GGAAGTAAAAGCTTATGAAT+AGG 0.477117 8_3:+10001688 None:intergenic
ATGGTGTTGAAGCTTCAATT+TGG 0.479485 8_3:-10001924 Msa1275820:CDS
GGACAGGTAAACGTGAAGAA+TGG 0.481824 8_3:-10003426 Msa1275820:CDS
TTCATTTCACAGAAGCCAAA+AGG 0.484383 8_3:-10004370 Msa1275820:CDS
TAGTAAGTGTTGCAATTCAT+GGG 0.484936 8_3:+10004516 None:intergenic
CTGAAGACTTTACGAGGAGA+TGG 0.485246 8_3:-10003448 Msa1275820:CDS
TGGAAAGAACTTGTAGAGGT+TGG 0.486789 8_3:-10001077 Msa1275820:CDS
TCAACCATCAATGTAACTAA+AGG 0.486876 8_3:+10004568 None:intergenic
ATGTTTCGGTTCAACGGAAG+AGG 0.489681 8_3:+10004664 None:intergenic
CACTGTCCAGCTCCTAGAAT+CGG 0.493765 8_3:+10003818 None:intergenic
GTGTTGGATCCTCCAATAAC+GGG 0.494877 8_3:+10003334 None:intergenic
CGAAGGCCGTGTGGGGAAGT+AGG 0.495559 8_3:+10001239 None:intergenic
GCTAAGCAGCCCACATCCTC+AGG 0.499529 8_3:-10001992 Msa1275820:CDS
TTAGCTCGTCCCGTTATTGG+AGG 0.499661 8_3:-10003343 Msa1275820:CDS
ATGTGGGCTGCTTAGCTCAA+TGG 0.499826 8_3:+10001999 None:intergenic
TTGAAATCAATGGTCTAGAA+TGG 0.501959 8_3:+10000340 None:intergenic
TTCAATCTTGGGCCGTTCAG+TGG 0.504725 8_3:-10004220 Msa1275820:CDS
CTTTATCCTTCAAGTGAGGA+AGG 0.508215 8_3:-10000564 Msa1275820:CDS
TGCCTAATGATCTACTCAAA+AGG 0.508255 8_3:-10001513 Msa1275820:intron
CTGCTTAGCTCAATGGCCAA+TGG 0.509548 8_3:+10002006 None:intergenic
GACAGGTAAACGTGAAGAAT+GGG 0.514304 8_3:-10003425 Msa1275820:CDS
CTAATCCATCTGCAGCATAA+GGG 0.518394 8_3:+10001198 None:intergenic
TACCTCGGACAGAGAATTGA+AGG 0.519761 8_3:-10000735 Msa1275820:CDS
AATGGAGCTGGTGTTTCACT+TGG 0.519813 8_3:+10003493 None:intergenic
GGTGTTGGATCCTCCAATAA+CGG 0.521313 8_3:+10003333 None:intergenic
AAACAAAGTTGATGGTTCCA+TGG 0.521970 8_3:+10003675 None:intergenic
AATTGACTTGACCATTATAG+AGG 0.522463 8_3:-10000787 Msa1275820:CDS
TATGGGCTGTTATTAAGTCA+TGG 0.522967 8_3:-10001172 Msa1275820:CDS
TGACCATGGATAGGGGTTGA+GGG 0.524941 8_3:+10000448 None:intergenic
AGAAGATTAATGCCTAAGAA+AGG 0.525519 8_3:-10000888 Msa1275820:CDS
TATATTGAGAATTTCATGCT+AGG 0.525987 8_3:-10003740 Msa1275820:CDS
ATATTTGTAGAAAGTGGAAA+AGG 0.528541 8_3:-10003887 Msa1275820:intron
GTGCTGAAGCAATCCATATG+AGG 0.530017 8_3:+10000979 None:intergenic
TGCACTTGCAAGGAGTGTCT+TGG 0.531139 8_3:-10001638 Msa1275820:CDS
ATGGGCTGTTATTAAGTCAT+GGG 0.531811 8_3:-10001171 Msa1275820:CDS
GGAAAGAGATCGTTTCTTGA+AGG 0.532072 8_3:-10003857 Msa1275820:CDS
TATCTTATGTTTCGGTTCAA+CGG 0.532427 8_3:+10004658 None:intergenic
TCCAAGACGTCAACAGCCTA+AGG 0.534304 8_3:+10004545 None:intergenic
GATATCAACGTCCTCACCGC+TGG 0.534632 8_3:-10004309 Msa1275820:CDS
ATAATAACATGACCATGGAT+AGG 0.536860 8_3:+10000439 None:intergenic
TGCAGATGGATTAGAGATAT+GGG 0.538537 8_3:-10001189 Msa1275820:CDS
TCACAGAAGCCAAAAGGTGA+AGG 0.539609 8_3:-10004364 Msa1275820:CDS
GGACAGTGATATTGATGCAT+AGG 0.541977 8_3:-10004341 Msa1275820:CDS
GAAAGTGGAAAAGGTAAAGT+GGG 0.542323 8_3:-10003878 Msa1275820:CDS
CACCTTGCCGTACCCTCGAA+GGG 0.545265 8_3:-10003314 Msa1275820:CDS
TCATCAAAGGTGTTAAACTC+TGG 0.547395 8_3:+10002831 None:intergenic
TTAGAAAGCTCATCATACTC+GGG 0.548951 8_3:+10000861 None:intergenic
GCTTTCTAAGAACTATCAAA+AGG 0.551115 8_3:-10000847 Msa1275820:CDS
GACTACCCTTATGCTGCAGA+TGG 0.551288 8_3:-10001203 Msa1275820:CDS
AGCTCTATATTTGACACCTA+CGG 0.553269 8_3:-10004243 Msa1275820:CDS
GGCAGGAAACCAGCTAAGAA+AGG 0.553298 8_3:-10003283 Msa1275820:intron
ACTCTAACCTGTGCGATGCA+CGG 0.553305 8_3:+10004728 None:intergenic
TTTCTTAGCTGGTTTCCTGC+CGG 0.555505 8_3:+10003285 None:intergenic
CTATAGTAGACTAATGGAGC+TGG 0.556484 8_3:+10003481 None:intergenic
CACAGAAGCCAAAAGGTGAA+GGG 0.557115 8_3:-10004363 Msa1275820:CDS
AGCTTCAACAAAACATGGGT+GGG 0.558582 8_3:-10002300 Msa1275820:CDS
TTTCTTGTTATCTAGAGGTG+TGG 0.558961 8_3:-10001273 Msa1275820:intron
TATACCAATGGCTGATGAGT+TGG 0.561542 8_3:+10001857 None:intergenic
AAGCTAGATAGGCAACTCTA+CGG 0.562069 8_3:-10002352 Msa1275820:CDS
AAGGAACTCCTCAGAACTGA+TGG 0.562150 8_3:-10002732 Msa1275820:CDS
CCTTGAATGACTTTAGGTGG+TGG 0.562607 8_3:+10002690 None:intergenic
AGAACAGCTTCAACAAAACA+TGG 0.564781 8_3:-10002305 Msa1275820:CDS
ACCGCTGGTTTAAATATCAC+AGG 0.565086 8_3:-10004294 Msa1275820:CDS
AACAATCAATCAAACATACA+TGG 0.567092 8_3:+10000416 None:intergenic
ACACCTTGCCGTACCCTCGA+AGG 0.567409 8_3:-10003315 Msa1275820:CDS
TCAGAAGGCGAAGGCCGTGT+GGG 0.568063 8_3:+10001231 None:intergenic
ATTGAGAAGACGTTCTTGAT+GGG 0.569095 8_3:-10001598 Msa1275820:CDS
AGCTATCAGCCTGAGGATGT+GGG 0.574193 8_3:+10001983 None:intergenic
ATCACCAACTCATCAGCCAT+TGG 0.576161 8_3:-10001861 Msa1275820:intron
TGAAGACTTTACGAGGAGAT+GGG 0.579763 8_3:-10003447 Msa1275820:CDS
AAATGCACGCACATCATCAA+AGG 0.579942 8_3:+10002818 None:intergenic
ATTTACTTTCCTGCAAGTGA+TGG 0.583346 8_3:-10001943 Msa1275820:CDS
GTAAGTGCAGATGTTAATGC+AGG 0.583635 8_3:+10002870 None:intergenic
GAAAAGTGAATCAATCTGGA+TGG 0.587432 8_3:-10002586 Msa1275820:intron
ATTGATGCATAGGAATGTGT+TGG 0.588062 8_3:-10004331 Msa1275820:CDS
CTATGAATAACATACGAAGA+AGG 0.592875 8_3:-10000480 Msa1275820:three_prime_UTR
TCTAAGGAATCGATATGGAC+CGG 0.593095 8_3:-10000607 Msa1275820:CDS
CTGAGGAGTTCCTTGAACAA+CGG 0.593569 8_3:+10002741 None:intergenic
ATTAGTGCTACTAGCGCTGA+TGG 0.593941 8_3:-10004186 Msa1275820:intron
CTTGAAGATATTCCTAACCA+TGG 0.597036 8_3:-10003692 Msa1275820:CDS
ATAGCAACTTGCAAGCCACT+GGG 0.598464 8_3:-10004460 Msa1275820:five_prime_UTR
ATCAGAAGGCGAAGGCCGTG+TGG 0.599096 8_3:+10001230 None:intergenic
GAGGAAGGATTGACTTGCAG+AGG 0.599561 8_3:-10000549 Msa1275820:CDS
ACCATCAATGTAACTAAAGG+GGG 0.599848 8_3:+10004571 None:intergenic
TAGAAAGCTCATCATACTCG+GGG 0.602660 8_3:+10000862 None:intergenic
CACCTTCAATTCTCTGTCCG+AGG 0.602919 8_3:+10000733 None:intergenic
TTAGGTGGTGGAAACTTAAG+GGG 0.604953 8_3:+10002702 None:intergenic
AGCTCCTAGAATCGGTGCGG+AGG 0.607434 8_3:+10003826 None:intergenic
GATATGGATATATTGAGTCA+TGG 0.608683 8_3:+10002112 None:intergenic
TTTCAATGGGATAGTGACAT+GGG 0.609030 8_3:-10003779 Msa1275820:CDS
ATTCCCTCAACCCCTATCCA+TGG 0.611269 8_3:-10000451 Msa1275820:three_prime_UTR
ACTTTACGAGGAGATGGGAC+AGG 0.611272 8_3:-10003442 Msa1275820:CDS
CATGGATAATAACATGACCA+TGG 0.612525 8_3:+10000434 None:intergenic
CAACTACATAAGCTTTAGCG+AGG 0.615101 8_3:+10001899 None:intergenic
AACAAATAGGCATCTTAGTG+TGG 0.616014 8_3:-10001716 Msa1275820:CDS
TTCATTGTGTCACGATAGTG+CGG 0.616157 8_3:+10001667 None:intergenic
AAGGGTAGTCCTCTATCAGA+AGG 0.619758 8_3:+10001216 None:intergenic
AATAACATGACCATGGATAG+GGG 0.620015 8_3:+10000441 None:intergenic
ACAGAAGCCAAAAGGTGAAG+GGG 0.621182 8_3:-10004362 Msa1275820:CDS
CAGCTTCAACAAAACATGGG+TGG 0.621253 8_3:-10002301 Msa1275820:CDS
TGCTGAAGCAATCCATATGA+GGG 0.621259 8_3:+10000980 None:intergenic
ACTCAATATATCCATATCTG+AGG 0.622340 8_3:-10002107 Msa1275820:CDS
ACCTGTGATATTTAAACCAG+CGG 0.625148 8_3:+10004293 None:intergenic
CAGAAGGCGAAGGCCGTGTG+GGG 0.628083 8_3:+10001232 None:intergenic
GAGTGTCTTGGTAAATGCAG+AGG 0.628961 8_3:-10001626 Msa1275820:CDS
GTGCTTCACCATCAGTTCTG+AGG 0.630572 8_3:+10002724 None:intergenic
AACCATCAATGTAACTAAAG+GGG 0.632517 8_3:+10004570 None:intergenic
ACGGCCCAAGATTGAACCGT+AGG 0.632707 8_3:+10004227 None:intergenic
TTATTCATAGAATTACTACA+AGG 0.633858 8_3:+10000493 None:intergenic
TGAACATTAATGCACTTGCA+AGG 0.638089 8_3:-10001648 Msa1275820:CDS
CATCAATGTAACTAAAGGGG+GGG 0.639683 8_3:+10004573 None:intergenic
AGTGTCTTGGTAAATGCAGA+GGG 0.642136 8_3:-10001625 Msa1275820:CDS
GTAAACGTGAAGAATGGGAA+AGG 0.646192 8_3:-10003420 Msa1275820:CDS
TTTGCTTTATCCTTCAAGTG+AGG 0.646310 8_3:-10000568 Msa1275820:CDS
ACCTTGCCGTACCCTCGAAG+GGG 0.646845 8_3:-10003313 Msa1275820:CDS
CCATCAATGTAACTAAAGGG+GGG 0.647108 8_3:+10004572 None:intergenic
CAGATCCTAAAAGTGAGAGA+CGG 0.648245 8_3:-10002992 Msa1275820:CDS
CTATGATGTCTACAATGATG+TGG 0.649661 8_3:-10003389 Msa1275820:CDS
GCTGGTTTAAATATCACAGG+TGG 0.653722 8_3:-10004291 Msa1275820:CDS
AAATGCAGCTGATACAACAA+AGG 0.654762 8_3:-10002079 Msa1275820:CDS
TTAAGAATGTAACCTCCGTA+CGG 0.656295 8_3:+10000927 None:intergenic
ATACCTTGAATGACTTTAGG+TGG 0.660488 8_3:+10002687 None:intergenic
GCTTCTGATGAACAATACCT+CGG 0.660873 8_3:-10000750 Msa1275820:CDS
TCAACCTGAGAGCCACTGAA+CGG 0.665209 8_3:+10004208 None:intergenic
TTTGGACAATATCCGTACGG+AGG 0.665441 8_3:-10000939 Msa1275820:CDS
GAACTTGTAGAGGTTGGTCA+CGG 0.669529 8_3:-10001071 Msa1275820:CDS
AATGGCTGATGAGTTGGTGA+TGG 0.671659 8_3:+10001863 None:intergenic
AGTAAGTGTTGCAATTCATG+GGG 0.674212 8_3:+10004517 None:intergenic
AGTCCTCTATCAGAAGGCGA+AGG 0.676314 8_3:+10001222 None:intergenic
TATGATGTCTACAATGATGT+GGG 0.681464 8_3:-10003388 Msa1275820:CDS
TCCAGCTCCTAGAATCGGTG+CGG 0.683704 8_3:+10003823 None:intergenic
GAACAGCTTCAACAAAACAT+GGG 0.695205 8_3:-10002304 Msa1275820:CDS
TGATATTTAAACCAGCGGTG+AGG 0.698360 8_3:+10004298 None:intergenic
GGACCAAAGCTATCAGCCTG+AGG 0.704451 8_3:+10001976 None:intergenic
TATTCATAGAATTACTACAA+GGG 0.705695 8_3:+10000494 None:intergenic
AAGGATCCTACTTCCCCACA+CGG 0.713360 8_3:-10001245 Msa1275820:CDS
GAAGAACTGAAGACTTTACG+AGG 0.717242 8_3:-10003454 Msa1275820:CDS
AGAAAGCTCATCATACTCGG+GGG 0.733263 8_3:+10000863 None:intergenic
TGAAGCAATCCATATGAGGG+TGG 0.741108 8_3:+10000983 None:intergenic
GCAAATGAAAGAAAACCCAG+TGG 0.781840 8_3:+10004445 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATTATATATTTTTTAAT+AGG - chr8_3:10003011-10003030 Msa1275820:intron 0.0%
!!! TAAATTATATATTTTTTAAT+AGG - chr8_3:10003011-10003030 Msa1275820:intron 0.0%
!! TTTGATATCAATATTATAAA+CGG + chr8_3:10003856-10003875 None:intergenic 10.0%
!! TTTGATATCAATATTATAAA+CGG + chr8_3:10003856-10003875 None:intergenic 10.0%
!! ATATCATTAGAAACATTTAA+TGG + chr8_3:10000395-10000414 None:intergenic 15.0%
!!! AGTTAGTATATTATGTTTTA+AGG - chr8_3:10001952-10001971 Msa1275820:CDS 15.0%
!!! TTATGATGACATTATTTTTT+TGG - chr8_3:10002067-10002086 Msa1275820:CDS 15.0%
!!! CAATATTCTTATTTTAGTTT+TGG + chr8_3:10002726-10002745 None:intergenic 15.0%
!! AAATATATCAAGCAATAATA+AGG + chr8_3:10002783-10002802 None:intergenic 15.0%
!! ATATCATTAGAAACATTTAA+TGG + chr8_3:10000395-10000414 None:intergenic 15.0%
!!! AGTTAGTATATTATGTTTTA+AGG - chr8_3:10001952-10001971 Msa1275820:CDS 15.0%
!!! TTATGATGACATTATTTTTT+TGG - chr8_3:10002067-10002086 Msa1275820:CDS 15.0%
!!! CAATATTCTTATTTTAGTTT+TGG + chr8_3:10002726-10002745 None:intergenic 15.0%
!! AAATATATCAAGCAATAATA+AGG + chr8_3:10002783-10002802 None:intergenic 15.0%
!!! TTTTTTAGAGTTTCATGTAT+AGG + chr8_3:10000431-10000450 None:intergenic 20.0%
!!! ATACAAAGTTCATTTTCAAT+GGG - chr8_3:10001388-10001407 Msa1275820:intron 20.0%
!!! ATTTTTCATAATTACCTTGT+TGG + chr8_3:10001585-10001604 None:intergenic 20.0%
!!! TACTTAATAGTGTCAAATTT+TGG + chr8_3:10001645-10001664 None:intergenic 20.0%
!!! ATTTTTAGTCATGCAAAATT+TGG - chr8_3:10002529-10002548 Msa1275820:CDS 20.0%
!! TAAAAAACTAGGATGAAAAA+TGG + chr8_3:10002752-10002771 None:intergenic 20.0%
!! AGGTTAACAATTAAAAAACT+AGG + chr8_3:10002763-10002782 None:intergenic 20.0%
!! TTGCTTGATATATTTAATGT+AGG - chr8_3:10002788-10002807 Msa1275820:CDS 20.0%
!! GATATTAATGTATAACTCAA+TGG + chr8_3:10003391-10003410 None:intergenic 20.0%
!! TATATTCAGTAGTTAAAAAG+AGG - chr8_3:10003719-10003738 Msa1275820:CDS 20.0%
!! TATTCATAGAATTACTACAA+GGG + chr8_3:10004689-10004708 None:intergenic 20.0%
!! TTATTCATAGAATTACTACA+AGG + chr8_3:10004690-10004709 None:intergenic 20.0%
!!! TTTTTTAGAGTTTCATGTAT+AGG + chr8_3:10000431-10000450 None:intergenic 20.0%
!!! ATACAAAGTTCATTTTCAAT+GGG - chr8_3:10001388-10001407 Msa1275820:intron 20.0%
!!! ATTTTTCATAATTACCTTGT+TGG + chr8_3:10001585-10001604 None:intergenic 20.0%
!!! TACTTAATAGTGTCAAATTT+TGG + chr8_3:10001645-10001664 None:intergenic 20.0%
!!! ATTTTTAGTCATGCAAAATT+TGG - chr8_3:10002529-10002548 Msa1275820:CDS 20.0%
!! TAAAAAACTAGGATGAAAAA+TGG + chr8_3:10002752-10002771 None:intergenic 20.0%
!! AGGTTAACAATTAAAAAACT+AGG + chr8_3:10002763-10002782 None:intergenic 20.0%
!! TTGCTTGATATATTTAATGT+AGG - chr8_3:10002788-10002807 Msa1275820:CDS 20.0%
!! GATATTAATGTATAACTCAA+TGG + chr8_3:10003391-10003410 None:intergenic 20.0%
!! TATATTCAGTAGTTAAAAAG+AGG - chr8_3:10003719-10003738 Msa1275820:CDS 20.0%
!! TATTCATAGAATTACTACAA+GGG + chr8_3:10004689-10004708 None:intergenic 20.0%
!! TTATTCATAGAATTACTACA+AGG + chr8_3:10004690-10004709 None:intergenic 20.0%
! GGACTATATATCTTATGTTT+CGG + chr8_3:10000533-10000552 None:intergenic 25.0%
! ATATTTGTAGAAAGTGGAAA+AGG - chr8_3:10001293-10001312 Msa1275820:intron 25.0%
!! CATACAAAGTTCATTTTCAA+TGG - chr8_3:10001387-10001406 Msa1275820:intron 25.0%
! TATATTGAGAATTTCATGCT+AGG - chr8_3:10001440-10001459 Msa1275820:intron 25.0%
!! GACTAAAAATGTGTTTCTAA+TGG + chr8_3:10002519-10002538 None:intergenic 25.0%
!!! TTTTGAAAAGTGAATCAATC+TGG - chr8_3:10002590-10002609 Msa1275820:intron 25.0%
! ATCAAGTATGTACAATTTGT+TGG + chr8_3:10003046-10003065 None:intergenic 25.0%
!! ATCATTTTGTAAGAAAAGGA+AGG + chr8_3:10003142-10003161 None:intergenic 25.0%
!! TTCCTTTTCTTACAAAATGA+TGG - chr8_3:10003141-10003160 Msa1275820:intron 25.0%
!! TTCCATCATTTTGTAAGAAA+AGG + chr8_3:10003146-10003165 None:intergenic 25.0%
! GTCAATTGAATTTATACCAA+TGG + chr8_3:10003338-10003357 None:intergenic 25.0%
! TTAATATCTATATGTGTGAC+AGG - chr8_3:10003403-10003422 Msa1275820:CDS 25.0%
! ATTGTCTGCTGTATTATATA+AGG - chr8_3:10003620-10003639 Msa1275820:CDS 25.0%
! TGCTGTATTATATAAGGATT+GGG - chr8_3:10003626-10003645 Msa1275820:CDS 25.0%
! TAACTACTGAATATATGTCT+AGG + chr8_3:10003714-10003733 None:intergenic 25.0%
!! AAACGGAAAGTTTAAAATTG+CGG + chr8_3:10003839-10003858 None:intergenic 25.0%
!!! ATTAATCTTCTGCTTTTAGT+TGG + chr8_3:10004283-10004302 None:intergenic 25.0%
! TATAATGGTCAAGTCAATTA+GGG + chr8_3:10004392-10004411 None:intergenic 25.0%
!! TTTTAGATGGAGATACTATT+AGG + chr8_3:10004661-10004680 None:intergenic 25.0%
! AATAGTATCTCCATCTAAAA+AGG - chr8_3:10004661-10004680 Msa1275820:five_prime_UTR 25.0%
! AACAATCAATCAAACATACA+TGG + chr8_3:10004767-10004786 None:intergenic 25.0%
!! GATTGATTGTTATAGTGTTT+TGG - chr8_3:10004776-10004795 Msa1275820:five_prime_UTR 25.0%
! GGACTATATATCTTATGTTT+CGG + chr8_3:10000533-10000552 None:intergenic 25.0%
! ATATTTGTAGAAAGTGGAAA+AGG - chr8_3:10001293-10001312 Msa1275820:intron 25.0%
!! CATACAAAGTTCATTTTCAA+TGG - chr8_3:10001387-10001406 Msa1275820:intron 25.0%
! TATATTGAGAATTTCATGCT+AGG - chr8_3:10001440-10001459 Msa1275820:intron 25.0%
!! GACTAAAAATGTGTTTCTAA+TGG + chr8_3:10002519-10002538 None:intergenic 25.0%
!!! TTTTGAAAAGTGAATCAATC+TGG - chr8_3:10002590-10002609 Msa1275820:intron 25.0%
! ATCAAGTATGTACAATTTGT+TGG + chr8_3:10003046-10003065 None:intergenic 25.0%
!! ATCATTTTGTAAGAAAAGGA+AGG + chr8_3:10003142-10003161 None:intergenic 25.0%
!! TTCCTTTTCTTACAAAATGA+TGG - chr8_3:10003141-10003160 Msa1275820:intron 25.0%
!! TTCCATCATTTTGTAAGAAA+AGG + chr8_3:10003146-10003165 None:intergenic 25.0%
! GTCAATTGAATTTATACCAA+TGG + chr8_3:10003338-10003357 None:intergenic 25.0%
! TTAATATCTATATGTGTGAC+AGG - chr8_3:10003403-10003422 Msa1275820:CDS 25.0%
! ATTGTCTGCTGTATTATATA+AGG - chr8_3:10003620-10003639 Msa1275820:CDS 25.0%
! TGCTGTATTATATAAGGATT+GGG - chr8_3:10003626-10003645 Msa1275820:CDS 25.0%
! TAACTACTGAATATATGTCT+AGG + chr8_3:10003714-10003733 None:intergenic 25.0%
!! AAACGGAAAGTTTAAAATTG+CGG + chr8_3:10003839-10003858 None:intergenic 25.0%
!!! ATTAATCTTCTGCTTTTAGT+TGG + chr8_3:10004283-10004302 None:intergenic 25.0%
! TATAATGGTCAAGTCAATTA+GGG + chr8_3:10004392-10004411 None:intergenic 25.0%
!! TTTTAGATGGAGATACTATT+AGG + chr8_3:10004661-10004680 None:intergenic 25.0%
! AATAGTATCTCCATCTAAAA+AGG - chr8_3:10004661-10004680 Msa1275820:five_prime_UTR 25.0%
! AACAATCAATCAAACATACA+TGG + chr8_3:10004767-10004786 None:intergenic 25.0%
!! GATTGATTGTTATAGTGTTT+TGG - chr8_3:10004776-10004795 Msa1275820:five_prime_UTR 25.0%
TATCTTATGTTTCGGTTCAA+CGG + chr8_3:10000525-10000544 None:intergenic 30.0%
ATAGTCCAAACTCTTACTTT+AGG - chr8_3:10000546-10000565 Msa1275820:CDS 30.0%
TAGTCCAAACTCTTACTTTA+GGG - chr8_3:10000547-10000566 Msa1275820:CDS 30.0%
AACCATCAATGTAACTAAAG+GGG + chr8_3:10000613-10000632 None:intergenic 30.0%
CAACCATCAATGTAACTAAA+GGG + chr8_3:10000614-10000633 None:intergenic 30.0%
TCAACCATCAATGTAACTAA+AGG + chr8_3:10000615-10000634 None:intergenic 30.0%
! TAGTAAGTGTTGCAATTCAT+GGG + chr8_3:10000667-10000686 None:intergenic 30.0%
! ATAGTAAGTGTTGCAATTCA+TGG + chr8_3:10000668-10000687 None:intergenic 30.0%
! TTTTCTTTCATTTGCCAGAA+AGG - chr8_3:10000743-10000762 Msa1275820:CDS 30.0%
AAAGTGCAAAACAAATTTGC+TGG - chr8_3:10000769-10000788 Msa1275820:CDS 30.0%
GTTATGAGTATAAATCCATG+TGG + chr8_3:10001088-10001107 None:intergenic 30.0%
ACTCACAAATTGAAGTGTAT+CGG + chr8_3:10001155-10001174 None:intergenic 30.0%
ACTTTCTACAAATATGTCAC+AGG + chr8_3:10001288-10001307 None:intergenic 30.0%
TGTGACATATTTGTAGAAAG+TGG - chr8_3:10001287-10001306 Msa1275820:intron 30.0%
TTCTCAATATAAAATGCTCC+TGG + chr8_3:10001431-10001450 None:intergenic 30.0%
TCTTGTCTATAGTAGACTAA+TGG + chr8_3:10001708-10001727 None:intergenic 30.0%
TATGATGTCTACAATGATGT+GGG - chr8_3:10001792-10001811 Msa1275820:intron 30.0%
AGTTTATAACCTTTCTTAGC+TGG + chr8_3:10001909-10001928 None:intergenic 30.0%
! TTTAAGGTATTTCTGCACAA+AGG - chr8_3:10001968-10001987 Msa1275820:CDS 30.0%
! AATGTTTTCATCCCTAGTAT+AGG - chr8_3:10002039-10002058 Msa1275820:CDS 30.0%
! ATGTTTTCATCCCTAGTATA+GGG - chr8_3:10002040-10002059 Msa1275820:CDS 30.0%
TCATAACATACCCTATACTA+GGG + chr8_3:10002053-10002072 None:intergenic 30.0%
ATCATAACATACCCTATACT+AGG + chr8_3:10002054-10002073 None:intergenic 30.0%
!! AGTTTGCTAAGTTCATTAGT+AGG + chr8_3:10002409-10002428 None:intergenic 30.0%
!!! TGAATTCTTTTGATGATGTG+TGG + chr8_3:10002665-10002684 None:intergenic 30.0%
ACACATCATCAAAAGAATTC+AGG - chr8_3:10002664-10002683 Msa1275820:intron 30.0%
GATATGGATATATTGAGTCA+TGG + chr8_3:10003071-10003090 None:intergenic 30.0%
ACTCAATATATCCATATCTG+AGG - chr8_3:10003073-10003092 Msa1275820:intron 30.0%
!! GCATTTATTTTCCTCAGATA+TGG + chr8_3:10003087-10003106 None:intergenic 30.0%
GGAAAGTAAATATCACTAAC+AGG + chr8_3:10003228-10003247 None:intergenic 30.0%
! CTATTTGTTGCTATGATGAA+TGG + chr8_3:10003453-10003472 None:intergenic 30.0%
CATTCATCATAGCAACAAAT+AGG - chr8_3:10003451-10003470 Msa1275820:CDS 30.0%
GGAAGTAAAAGCTTATGAAT+AGG + chr8_3:10003495-10003514 None:intergenic 30.0%
CTGCTGTATTATATAAGGAT+TGG - chr8_3:10003625-10003644 Msa1275820:CDS 30.0%
!! TACCTTTTGAGTAGATCATT+AGG + chr8_3:10003672-10003691 None:intergenic 30.0%
! CTAGGATCTAATGTTTTGTA+AGG + chr8_3:10003696-10003715 None:intergenic 30.0%
TGTCTAAACATCAATGTTTG+TGG - chr8_3:10003794-10003813 Msa1275820:CDS 30.0%
!! ATTTTGGAAAGAACTTGTAG+AGG - chr8_3:10004099-10004118 Msa1275820:intron 30.0%
! AATTTTGGACAATATCCGTA+CGG - chr8_3:10004238-10004257 Msa1275820:CDS 30.0%
AGAAGATTAATGCCTAAGAA+AGG - chr8_3:10004292-10004311 Msa1275820:CDS 30.0%
! GCTTTCTAAGAACTATCAAA+AGG - chr8_3:10004333-10004352 Msa1275820:CDS 30.0%
!!! TCAATTAGGGTGTCATTTTT+TGG + chr8_3:10004379-10004398 None:intergenic 30.0%
CTATAATGGTCAAGTCAATT+AGG + chr8_3:10004393-10004412 None:intergenic 30.0%
!! AATTGACTTGACCATTATAG+AGG - chr8_3:10004393-10004412 Msa1275820:exon 30.0%
TTGAACAAAAACTCACTCAA+AGG - chr8_3:10004536-10004555 Msa1275820:five_prime_UTR 30.0%
GAAGGATAAAGCAAAGTATA+CGG + chr8_3:10004607-10004626 None:intergenic 30.0%
CTATGAATAACATACGAAGA+AGG - chr8_3:10004700-10004719 Msa1275820:five_prime_UTR 30.0%
TAATAACATGACCATGGATA+GGG + chr8_3:10004743-10004762 None:intergenic 30.0%
ATAATAACATGACCATGGAT+AGG + chr8_3:10004744-10004763 None:intergenic 30.0%
TTGAAATCAATGGTCTAGAA+TGG + chr8_3:10004843-10004862 None:intergenic 30.0%
! AAAGCTGCATTTGAAATCAA+TGG + chr8_3:10004853-10004872 None:intergenic 30.0%
TATCTTATGTTTCGGTTCAA+CGG + chr8_3:10000525-10000544 None:intergenic 30.0%
ATAGTCCAAACTCTTACTTT+AGG - chr8_3:10000546-10000565 Msa1275820:CDS 30.0%
TAGTCCAAACTCTTACTTTA+GGG - chr8_3:10000547-10000566 Msa1275820:CDS 30.0%
AACCATCAATGTAACTAAAG+GGG + chr8_3:10000613-10000632 None:intergenic 30.0%
CAACCATCAATGTAACTAAA+GGG + chr8_3:10000614-10000633 None:intergenic 30.0%
TCAACCATCAATGTAACTAA+AGG + chr8_3:10000615-10000634 None:intergenic 30.0%
! TAGTAAGTGTTGCAATTCAT+GGG + chr8_3:10000667-10000686 None:intergenic 30.0%
! ATAGTAAGTGTTGCAATTCA+TGG + chr8_3:10000668-10000687 None:intergenic 30.0%
! TTTTCTTTCATTTGCCAGAA+AGG - chr8_3:10000743-10000762 Msa1275820:CDS 30.0%
AAAGTGCAAAACAAATTTGC+TGG - chr8_3:10000769-10000788 Msa1275820:CDS 30.0%
GTTATGAGTATAAATCCATG+TGG + chr8_3:10001088-10001107 None:intergenic 30.0%
ACTCACAAATTGAAGTGTAT+CGG + chr8_3:10001155-10001174 None:intergenic 30.0%
ACTTTCTACAAATATGTCAC+AGG + chr8_3:10001288-10001307 None:intergenic 30.0%
TGTGACATATTTGTAGAAAG+TGG - chr8_3:10001287-10001306 Msa1275820:intron 30.0%
TTCTCAATATAAAATGCTCC+TGG + chr8_3:10001431-10001450 None:intergenic 30.0%
TCTTGTCTATAGTAGACTAA+TGG + chr8_3:10001708-10001727 None:intergenic 30.0%
TATGATGTCTACAATGATGT+GGG - chr8_3:10001792-10001811 Msa1275820:intron 30.0%
AGTTTATAACCTTTCTTAGC+TGG + chr8_3:10001909-10001928 None:intergenic 30.0%
! TTTAAGGTATTTCTGCACAA+AGG - chr8_3:10001968-10001987 Msa1275820:CDS 30.0%
! AATGTTTTCATCCCTAGTAT+AGG - chr8_3:10002039-10002058 Msa1275820:CDS 30.0%
! ATGTTTTCATCCCTAGTATA+GGG - chr8_3:10002040-10002059 Msa1275820:CDS 30.0%
TCATAACATACCCTATACTA+GGG + chr8_3:10002053-10002072 None:intergenic 30.0%
ATCATAACATACCCTATACT+AGG + chr8_3:10002054-10002073 None:intergenic 30.0%
!! AGTTTGCTAAGTTCATTAGT+AGG + chr8_3:10002409-10002428 None:intergenic 30.0%
!!! TGAATTCTTTTGATGATGTG+TGG + chr8_3:10002665-10002684 None:intergenic 30.0%
ACACATCATCAAAAGAATTC+AGG - chr8_3:10002664-10002683 Msa1275820:intron 30.0%
GATATGGATATATTGAGTCA+TGG + chr8_3:10003071-10003090 None:intergenic 30.0%
ACTCAATATATCCATATCTG+AGG - chr8_3:10003073-10003092 Msa1275820:intron 30.0%
!! GCATTTATTTTCCTCAGATA+TGG + chr8_3:10003087-10003106 None:intergenic 30.0%
GGAAAGTAAATATCACTAAC+AGG + chr8_3:10003228-10003247 None:intergenic 30.0%
! CTATTTGTTGCTATGATGAA+TGG + chr8_3:10003453-10003472 None:intergenic 30.0%
CATTCATCATAGCAACAAAT+AGG - chr8_3:10003451-10003470 Msa1275820:CDS 30.0%
GGAAGTAAAAGCTTATGAAT+AGG + chr8_3:10003495-10003514 None:intergenic 30.0%
CTGCTGTATTATATAAGGAT+TGG - chr8_3:10003625-10003644 Msa1275820:CDS 30.0%
!! TACCTTTTGAGTAGATCATT+AGG + chr8_3:10003672-10003691 None:intergenic 30.0%
! CTAGGATCTAATGTTTTGTA+AGG + chr8_3:10003696-10003715 None:intergenic 30.0%
TGTCTAAACATCAATGTTTG+TGG - chr8_3:10003794-10003813 Msa1275820:CDS 30.0%
!! ATTTTGGAAAGAACTTGTAG+AGG - chr8_3:10004099-10004118 Msa1275820:intron 30.0%
! AATTTTGGACAATATCCGTA+CGG - chr8_3:10004238-10004257 Msa1275820:CDS 30.0%
AGAAGATTAATGCCTAAGAA+AGG - chr8_3:10004292-10004311 Msa1275820:CDS 30.0%
! GCTTTCTAAGAACTATCAAA+AGG - chr8_3:10004333-10004352 Msa1275820:CDS 30.0%
!!! TCAATTAGGGTGTCATTTTT+TGG + chr8_3:10004379-10004398 None:intergenic 30.0%
CTATAATGGTCAAGTCAATT+AGG + chr8_3:10004393-10004412 None:intergenic 30.0%
!! AATTGACTTGACCATTATAG+AGG - chr8_3:10004393-10004412 Msa1275820:exon 30.0%
TTGAACAAAAACTCACTCAA+AGG - chr8_3:10004536-10004555 Msa1275820:five_prime_UTR 30.0%
GAAGGATAAAGCAAAGTATA+CGG + chr8_3:10004607-10004626 None:intergenic 30.0%
CTATGAATAACATACGAAGA+AGG - chr8_3:10004700-10004719 Msa1275820:five_prime_UTR 30.0%
TAATAACATGACCATGGATA+GGG + chr8_3:10004743-10004762 None:intergenic 30.0%
ATAATAACATGACCATGGAT+AGG + chr8_3:10004744-10004763 None:intergenic 30.0%
TTGAAATCAATGGTCTAGAA+TGG + chr8_3:10004843-10004862 None:intergenic 30.0%
! AAAGCTGCATTTGAAATCAA+TGG + chr8_3:10004853-10004872 None:intergenic 30.0%
ACCATCAATGTAACTAAAGG+GGG + chr8_3:10000612-10000631 None:intergenic 35.0%
! TTACATTGATGGTTGACCTT+AGG - chr8_3:10000619-10000638 Msa1275820:CDS 35.0%
! AGTAAGTGTTGCAATTCATG+GGG + chr8_3:10000666-10000685 None:intergenic 35.0%
TTCATTTCACAGAAGCCAAA+AGG - chr8_3:10000810-10000829 Msa1275820:CDS 35.0%
ATTGATGCATAGGAATGTGT+TGG - chr8_3:10000849-10000868 Msa1275820:CDS 35.0%
ACCTGTGATATTTAAACCAG+CGG + chr8_3:10000890-10000909 None:intergenic 35.0%
! AAATATCACAGGTGGATTCA+AGG - chr8_3:10000897-10000916 Msa1275820:CDS 35.0%
AGCTCTATATTTGACACCTA+CGG - chr8_3:10000937-10000956 Msa1275820:CDS 35.0%
AGAAAGTGGAAAAGGTAAAG+TGG - chr8_3:10001301-10001320 Msa1275820:intron 35.0%
GAAAGTGGAAAAGGTAAAGT+GGG - chr8_3:10001302-10001321 Msa1275820:intron 35.0%
! TTTTCAATGGGATAGTGACA+TGG - chr8_3:10001400-10001419 Msa1275820:intron 35.0%
TTTCAATGGGATAGTGACAT+GGG - chr8_3:10001401-10001420 Msa1275820:intron 35.0%
CTTGAAGATATTCCTAACCA+TGG - chr8_3:10001488-10001507 Msa1275820:intron 35.0%
!! AAACAAAGTTGATGGTTCCA+TGG + chr8_3:10001508-10001527 None:intergenic 35.0%
TGAGTTGCAAACAAAGTTGA+TGG + chr8_3:10001516-10001535 None:intergenic 35.0%
! TCAACTTTGTTTGCAACTCA+TGG - chr8_3:10001516-10001535 Msa1275820:CDS 35.0%
CTATGATGTCTACAATGATG+TGG - chr8_3:10001791-10001810 Msa1275820:intron 35.0%
CTTCCAAGAGATGAATCATT+TGG - chr8_3:10002226-10002245 Msa1275820:intron 35.0%
TGACCAAATGATTCATCTCT+TGG + chr8_3:10002232-10002251 None:intergenic 35.0%
!! TCATCAAAGGTGTTAAACTC+TGG + chr8_3:10002352-10002371 None:intergenic 35.0%
!! TTTAGGTGGTGGAAACTTAA+GGG + chr8_3:10002482-10002501 None:intergenic 35.0%
ATACCTTGAATGACTTTAGG+TGG + chr8_3:10002496-10002515 None:intergenic 35.0%
TGGATACCTTGAATGACTTT+AGG + chr8_3:10002499-10002518 None:intergenic 35.0%
GAAAAGTGAATCAATCTGGA+TGG - chr8_3:10002594-10002613 Msa1275820:intron 35.0%
TTTACAAGAGAGATGATTGC+TGG - chr8_3:10002632-10002651 Msa1275820:intron 35.0%
!! GTTTTGTTGAAGCTGTTCTT+TGG + chr8_3:10002874-10002893 None:intergenic 35.0%
AGAACAGCTTCAACAAAACA+TGG - chr8_3:10002875-10002894 Msa1275820:CDS 35.0%
GAACAGCTTCAACAAAACAT+GGG - chr8_3:10002876-10002895 Msa1275820:CDS 35.0%
AAATGCAGCTGATACAACAA+AGG - chr8_3:10003101-10003120 Msa1275820:intron 35.0%
ATTTACTTTCCTGCAAGTGA+TGG - chr8_3:10003237-10003256 Msa1275820:intron 35.0%
! ATGGTGTTGAAGCTTCAATT+TGG - chr8_3:10003256-10003275 Msa1275820:intron 35.0%
AACAAATAGGCATCTTAGTG+TGG - chr8_3:10003464-10003483 Msa1275820:CDS 35.0%
TGAACATTAATGCACTTGCA+AGG - chr8_3:10003532-10003551 Msa1275820:intron 35.0%
TATTGAGAAGACGTTCTTGA+TGG - chr8_3:10003581-10003600 Msa1275820:intron 35.0%
ATTGAGAAGACGTTCTTGAT+GGG - chr8_3:10003582-10003601 Msa1275820:intron 35.0%
TGCCTAATGATCTACTCAAA+AGG - chr8_3:10003667-10003686 Msa1275820:CDS 35.0%
GAATATCCCATCTTAGATTG+AGG + chr8_3:10003764-10003783 None:intergenic 35.0%
! CAATCTAAGATGGGATATTC+AGG - chr8_3:10003764-10003783 Msa1275820:CDS 35.0%
! CTTCCTTTCTTGTTATCTAG+AGG - chr8_3:10003902-10003921 Msa1275820:intron 35.0%
ACACCTCTAGATAACAAGAA+AGG + chr8_3:10003908-10003927 None:intergenic 35.0%
! TTTCTTGTTATCTAGAGGTG+TGG - chr8_3:10003907-10003926 Msa1275820:intron 35.0%
!! TGCAGATGGATTAGAGATAT+GGG - chr8_3:10003991-10004010 Msa1275820:intron 35.0%
! TATGGGCTGTTATTAAGTCA+TGG - chr8_3:10004008-10004027 Msa1275820:intron 35.0%
! ATGGGCTGTTATTAAGTCAT+GGG - chr8_3:10004009-10004028 Msa1275820:intron 35.0%
! ATTCTGAACTCCAAGCATTT+TGG - chr8_3:10004083-10004102 Msa1275820:intron 35.0%
CAAGTTCTTTCCAAAATGCT+TGG + chr8_3:10004096-10004115 None:intergenic 35.0%
GTGACTTGAAAAATGCAACA+TGG - chr8_3:10004131-10004150 Msa1275820:intron 35.0%
ACTTGAAAAATGCAACATGG+TGG - chr8_3:10004134-10004153 Msa1275820:intron 35.0%
CTTGAAAAATGCAACATGGT+GGG - chr8_3:10004135-10004154 Msa1275820:intron 35.0%
! CTTCATGCAGCTGTTAATTT+TGG - chr8_3:10004223-10004242 Msa1275820:CDS 35.0%
TTAAGAATGTAACCTCCGTA+CGG + chr8_3:10004256-10004275 None:intergenic 35.0%
!! ATCTTCTGCTTTTAGTTGGT+CGG + chr8_3:10004279-10004298 None:intergenic 35.0%
TTAGAAAGCTCATCATACTC+GGG + chr8_3:10004322-10004341 None:intergenic 35.0%
CTTAGAAAGCTCATCATACT+CGG + chr8_3:10004323-10004342 None:intergenic 35.0%
TCTTGACAAGACCTCTATAA+TGG + chr8_3:10004407-10004426 None:intergenic 35.0%
AGAGAATTGAAGGTGATCTT+TGG - chr8_3:10004455-10004474 Msa1275820:five_prime_UTR 35.0%
TTCTGATTCACAACCATTAG+AGG - chr8_3:10004480-10004499 Msa1275820:five_prime_UTR 35.0%
AATCTCTTGAAAGCCTCTAA+TGG + chr8_3:10004496-10004515 None:intergenic 35.0%
TTAGAGGCTTTCAAGAGATT+TGG - chr8_3:10004496-10004515 Msa1275820:five_prime_UTR 35.0%
! CAAGAGATTTGGAACAAAGT+TGG - chr8_3:10004507-10004526 Msa1275820:five_prime_UTR 35.0%
GGAATAATGATGAGACTCTA+AGG - chr8_3:10004557-10004576 Msa1275820:five_prime_UTR 35.0%
AAAGTATACGGCATCTTAAC+CGG + chr8_3:10004595-10004614 None:intergenic 35.0%
TTTGCTTTATCCTTCAAGTG+AGG - chr8_3:10004612-10004631 Msa1275820:five_prime_UTR 35.0%
! TACAAGGGAACCTTTTTAGA+TGG + chr8_3:10004674-10004693 None:intergenic 35.0%
AATAACATGACCATGGATAG+GGG + chr8_3:10004742-10004761 None:intergenic 35.0%
CATGGATAATAACATGACCA+TGG + chr8_3:10004749-10004768 None:intergenic 35.0%
ACCATCAATGTAACTAAAGG+GGG + chr8_3:10000612-10000631 None:intergenic 35.0%
! TTACATTGATGGTTGACCTT+AGG - chr8_3:10000619-10000638 Msa1275820:CDS 35.0%
! AGTAAGTGTTGCAATTCATG+GGG + chr8_3:10000666-10000685 None:intergenic 35.0%
TTCATTTCACAGAAGCCAAA+AGG - chr8_3:10000810-10000829 Msa1275820:CDS 35.0%
ATTGATGCATAGGAATGTGT+TGG - chr8_3:10000849-10000868 Msa1275820:CDS 35.0%
ACCTGTGATATTTAAACCAG+CGG + chr8_3:10000890-10000909 None:intergenic 35.0%
! AAATATCACAGGTGGATTCA+AGG - chr8_3:10000897-10000916 Msa1275820:CDS 35.0%
AGCTCTATATTTGACACCTA+CGG - chr8_3:10000937-10000956 Msa1275820:CDS 35.0%
AGAAAGTGGAAAAGGTAAAG+TGG - chr8_3:10001301-10001320 Msa1275820:intron 35.0%
GAAAGTGGAAAAGGTAAAGT+GGG - chr8_3:10001302-10001321 Msa1275820:intron 35.0%
! TTTTCAATGGGATAGTGACA+TGG - chr8_3:10001400-10001419 Msa1275820:intron 35.0%
TTTCAATGGGATAGTGACAT+GGG - chr8_3:10001401-10001420 Msa1275820:intron 35.0%
CTTGAAGATATTCCTAACCA+TGG - chr8_3:10001488-10001507 Msa1275820:intron 35.0%
!! AAACAAAGTTGATGGTTCCA+TGG + chr8_3:10001508-10001527 None:intergenic 35.0%
TGAGTTGCAAACAAAGTTGA+TGG + chr8_3:10001516-10001535 None:intergenic 35.0%
! TCAACTTTGTTTGCAACTCA+TGG - chr8_3:10001516-10001535 Msa1275820:CDS 35.0%
CTATGATGTCTACAATGATG+TGG - chr8_3:10001791-10001810 Msa1275820:intron 35.0%
CTTCCAAGAGATGAATCATT+TGG - chr8_3:10002226-10002245 Msa1275820:intron 35.0%
TGACCAAATGATTCATCTCT+TGG + chr8_3:10002232-10002251 None:intergenic 35.0%
!! TCATCAAAGGTGTTAAACTC+TGG + chr8_3:10002352-10002371 None:intergenic 35.0%
!! TTTAGGTGGTGGAAACTTAA+GGG + chr8_3:10002482-10002501 None:intergenic 35.0%
ATACCTTGAATGACTTTAGG+TGG + chr8_3:10002496-10002515 None:intergenic 35.0%
TGGATACCTTGAATGACTTT+AGG + chr8_3:10002499-10002518 None:intergenic 35.0%
GAAAAGTGAATCAATCTGGA+TGG - chr8_3:10002594-10002613 Msa1275820:intron 35.0%
TTTACAAGAGAGATGATTGC+TGG - chr8_3:10002632-10002651 Msa1275820:intron 35.0%
!! GTTTTGTTGAAGCTGTTCTT+TGG + chr8_3:10002874-10002893 None:intergenic 35.0%
AGAACAGCTTCAACAAAACA+TGG - chr8_3:10002875-10002894 Msa1275820:CDS 35.0%
GAACAGCTTCAACAAAACAT+GGG - chr8_3:10002876-10002895 Msa1275820:CDS 35.0%
AAATGCAGCTGATACAACAA+AGG - chr8_3:10003101-10003120 Msa1275820:intron 35.0%
ATTTACTTTCCTGCAAGTGA+TGG - chr8_3:10003237-10003256 Msa1275820:intron 35.0%
! ATGGTGTTGAAGCTTCAATT+TGG - chr8_3:10003256-10003275 Msa1275820:intron 35.0%
AACAAATAGGCATCTTAGTG+TGG - chr8_3:10003464-10003483 Msa1275820:CDS 35.0%
TGAACATTAATGCACTTGCA+AGG - chr8_3:10003532-10003551 Msa1275820:intron 35.0%
TATTGAGAAGACGTTCTTGA+TGG - chr8_3:10003581-10003600 Msa1275820:intron 35.0%
ATTGAGAAGACGTTCTTGAT+GGG - chr8_3:10003582-10003601 Msa1275820:intron 35.0%
TGCCTAATGATCTACTCAAA+AGG - chr8_3:10003667-10003686 Msa1275820:CDS 35.0%
GAATATCCCATCTTAGATTG+AGG + chr8_3:10003764-10003783 None:intergenic 35.0%
! CAATCTAAGATGGGATATTC+AGG - chr8_3:10003764-10003783 Msa1275820:CDS 35.0%
! CTTCCTTTCTTGTTATCTAG+AGG - chr8_3:10003902-10003921 Msa1275820:intron 35.0%
ACACCTCTAGATAACAAGAA+AGG + chr8_3:10003908-10003927 None:intergenic 35.0%
! TTTCTTGTTATCTAGAGGTG+TGG - chr8_3:10003907-10003926 Msa1275820:intron 35.0%
!! TGCAGATGGATTAGAGATAT+GGG - chr8_3:10003991-10004010 Msa1275820:intron 35.0%
! TATGGGCTGTTATTAAGTCA+TGG - chr8_3:10004008-10004027 Msa1275820:intron 35.0%
! ATGGGCTGTTATTAAGTCAT+GGG - chr8_3:10004009-10004028 Msa1275820:intron 35.0%
! ATTCTGAACTCCAAGCATTT+TGG - chr8_3:10004083-10004102 Msa1275820:intron 35.0%
CAAGTTCTTTCCAAAATGCT+TGG + chr8_3:10004096-10004115 None:intergenic 35.0%
GTGACTTGAAAAATGCAACA+TGG - chr8_3:10004131-10004150 Msa1275820:intron 35.0%
ACTTGAAAAATGCAACATGG+TGG - chr8_3:10004134-10004153 Msa1275820:intron 35.0%
CTTGAAAAATGCAACATGGT+GGG - chr8_3:10004135-10004154 Msa1275820:intron 35.0%
! CTTCATGCAGCTGTTAATTT+TGG - chr8_3:10004223-10004242 Msa1275820:CDS 35.0%
TTAAGAATGTAACCTCCGTA+CGG + chr8_3:10004256-10004275 None:intergenic 35.0%
!! ATCTTCTGCTTTTAGTTGGT+CGG + chr8_3:10004279-10004298 None:intergenic 35.0%
TTAGAAAGCTCATCATACTC+GGG + chr8_3:10004322-10004341 None:intergenic 35.0%
CTTAGAAAGCTCATCATACT+CGG + chr8_3:10004323-10004342 None:intergenic 35.0%
TCTTGACAAGACCTCTATAA+TGG + chr8_3:10004407-10004426 None:intergenic 35.0%
AGAGAATTGAAGGTGATCTT+TGG - chr8_3:10004455-10004474 Msa1275820:five_prime_UTR 35.0%
TTCTGATTCACAACCATTAG+AGG - chr8_3:10004480-10004499 Msa1275820:five_prime_UTR 35.0%
AATCTCTTGAAAGCCTCTAA+TGG + chr8_3:10004496-10004515 None:intergenic 35.0%
TTAGAGGCTTTCAAGAGATT+TGG - chr8_3:10004496-10004515 Msa1275820:five_prime_UTR 35.0%
! CAAGAGATTTGGAACAAAGT+TGG - chr8_3:10004507-10004526 Msa1275820:five_prime_UTR 35.0%
GGAATAATGATGAGACTCTA+AGG - chr8_3:10004557-10004576 Msa1275820:five_prime_UTR 35.0%
AAAGTATACGGCATCTTAAC+CGG + chr8_3:10004595-10004614 None:intergenic 35.0%
TTTGCTTTATCCTTCAAGTG+AGG - chr8_3:10004612-10004631 Msa1275820:five_prime_UTR 35.0%
! TACAAGGGAACCTTTTTAGA+TGG + chr8_3:10004674-10004693 None:intergenic 35.0%
AATAACATGACCATGGATAG+GGG + chr8_3:10004742-10004761 None:intergenic 35.0%
CATGGATAATAACATGACCA+TGG + chr8_3:10004749-10004768 None:intergenic 35.0%
CATCAATGTAACTAAAGGGG+GGG + chr8_3:10000610-10000629 None:intergenic 40.0%
CCATCAATGTAACTAAAGGG+GGG + chr8_3:10000611-10000630 None:intergenic 40.0%
GCAAATGAAAGAAAACCCAG+TGG + chr8_3:10000738-10000757 None:intergenic 40.0%
! TTTTGCACTTTCTGCCTTTC+TGG + chr8_3:10000760-10000779 None:intergenic 40.0%
GGACAGTGATATTGATGCAT+AGG - chr8_3:10000839-10000858 Msa1275820:CDS 40.0%
TGATATTTAAACCAGCGGTG+AGG + chr8_3:10000885-10000904 None:intergenic 40.0%
!! ACCGCTGGTTTAAATATCAC+AGG - chr8_3:10000886-10000905 Msa1275820:CDS 40.0%
! GCTGGTTTAAATATCACAGG+TGG - chr8_3:10000889-10000908 Msa1275820:CDS 40.0%
CAAACATAATGCTCACCACA+TGG - chr8_3:10001070-10001089 Msa1275820:CDS 40.0%
GGAAAGAGATCGTTTCTTGA+AGG - chr8_3:10001323-10001342 Msa1275820:intron 40.0%
!! AAGTTGATGGTTCCATGGTT+AGG + chr8_3:10001503-10001522 None:intergenic 40.0%
! ACGCATTTTCTTTGCCAACA+AGG - chr8_3:10001568-10001587 Msa1275820:CDS 40.0%
CTATAGTAGACTAATGGAGC+TGG + chr8_3:10001702-10001721 None:intergenic 40.0%
GAAGAACTGAAGACTTTACG+AGG - chr8_3:10001726-10001745 Msa1275820:CDS 40.0%
TGAAGACTTTACGAGGAGAT+GGG - chr8_3:10001733-10001752 Msa1275820:CDS 40.0%
GACAGGTAAACGTGAAGAAT+GGG - chr8_3:10001755-10001774 Msa1275820:CDS 40.0%
GTAAACGTGAAGAATGGGAA+AGG - chr8_3:10001760-10001779 Msa1275820:intron 40.0%
!!! GCTAAGCTAGCTTTTCTATC+AGG + chr8_3:10001822-10001841 None:intergenic 40.0%
CTGCACAAAGGAAAGTGATA+TGG - chr8_3:10001980-10001999 Msa1275820:CDS 40.0%
CAGATCCTAAAAGTGAGAGA+CGG - chr8_3:10002188-10002207 Msa1275820:intron 40.0%
GTAAGTGCAGATGTTAATGC+AGG + chr8_3:10002313-10002332 None:intergenic 40.0%
AAATGCACGCACATCATCAA+AGG + chr8_3:10002365-10002384 None:intergenic 40.0%
GTTCCTTGAACAACGGTATA+GGG + chr8_3:10002435-10002454 None:intergenic 40.0%
AGTTCCTTGAACAACGGTAT+AGG + chr8_3:10002436-10002455 None:intergenic 40.0%
!! TTAGGTGGTGGAAACTTAAG+GGG + chr8_3:10002481-10002500 None:intergenic 40.0%
!! CTTTAGGTGGTGGAAACTTA+AGG + chr8_3:10002483-10002502 None:intergenic 40.0%
AAGCTAGATAGGCAACTCTA+CGG - chr8_3:10002828-10002847 Msa1275820:CDS 40.0%
CTGTTCTTTGGTTATTGTGC+TGG + chr8_3:10002862-10002881 None:intergenic 40.0%
AGCTTCAACAAAACATGGGT+GGG - chr8_3:10002880-10002899 Msa1275820:CDS 40.0%
!! TGATGGAACTTTGAAGCCAT+TGG - chr8_3:10003158-10003177 Msa1275820:intron 40.0%
! CAACTACATAAGCTTTAGCG+AGG + chr8_3:10003284-10003303 None:intergenic 40.0%
TATACCAATGGCTGATGAGT+TGG + chr8_3:10003326-10003345 None:intergenic 40.0%
TTCATTGTGTCACGATAGTG+CGG + chr8_3:10003516-10003535 None:intergenic 40.0%
AGTGTCTTGGTAAATGCAGA+GGG - chr8_3:10003555-10003574 Msa1275820:intron 40.0%
TTCGCAACCTCAATCTAAGA+TGG - chr8_3:10003754-10003773 Msa1275820:CDS 40.0%
! TCGCAACCTCAATCTAAGAT+GGG - chr8_3:10003755-10003774 Msa1275820:CDS 40.0%
CTAATCCATCTGCAGCATAA+GGG + chr8_3:10003985-10004004 None:intergenic 40.0%
TCTAATCCATCTGCAGCATA+AGG + chr8_3:10003986-10004005 None:intergenic 40.0%
!! CTGCAGATGGATTAGAGATA+TGG - chr8_3:10003990-10004009 Msa1275820:intron 40.0%
TGGAAAGAACTTGTAGAGGT+TGG - chr8_3:10004103-10004122 Msa1275820:intron 40.0%
TGCTGAAGCAATCCATATGA+GGG + chr8_3:10004203-10004222 None:intergenic 40.0%
TAGAAAGCTCATCATACTCG+GGG + chr8_3:10004321-10004340 None:intergenic 40.0%
GCTTCTGATGAACAATACCT+CGG - chr8_3:10004430-10004449 Msa1275820:five_prime_UTR 40.0%
! GAGACTCTAAGGAATCGATA+TGG - chr8_3:10004568-10004587 Msa1275820:five_prime_UTR 40.0%
TCTAAGGAATCGATATGGAC+CGG - chr8_3:10004573-10004592 Msa1275820:five_prime_UTR 40.0%
CTTTATCCTTCAAGTGAGGA+AGG - chr8_3:10004616-10004635 Msa1275820:five_prime_UTR 40.0%
CATCAATGTAACTAAAGGGG+GGG + chr8_3:10000610-10000629 None:intergenic 40.0%
CCATCAATGTAACTAAAGGG+GGG + chr8_3:10000611-10000630 None:intergenic 40.0%
GCAAATGAAAGAAAACCCAG+TGG + chr8_3:10000738-10000757 None:intergenic 40.0%
! TTTTGCACTTTCTGCCTTTC+TGG + chr8_3:10000760-10000779 None:intergenic 40.0%
GGACAGTGATATTGATGCAT+AGG - chr8_3:10000839-10000858 Msa1275820:CDS 40.0%
TGATATTTAAACCAGCGGTG+AGG + chr8_3:10000885-10000904 None:intergenic 40.0%
!! ACCGCTGGTTTAAATATCAC+AGG - chr8_3:10000886-10000905 Msa1275820:CDS 40.0%
! GCTGGTTTAAATATCACAGG+TGG - chr8_3:10000889-10000908 Msa1275820:CDS 40.0%
CAAACATAATGCTCACCACA+TGG - chr8_3:10001070-10001089 Msa1275820:CDS 40.0%
GGAAAGAGATCGTTTCTTGA+AGG - chr8_3:10001323-10001342 Msa1275820:intron 40.0%
!! AAGTTGATGGTTCCATGGTT+AGG + chr8_3:10001503-10001522 None:intergenic 40.0%
! ACGCATTTTCTTTGCCAACA+AGG - chr8_3:10001568-10001587 Msa1275820:CDS 40.0%
CTATAGTAGACTAATGGAGC+TGG + chr8_3:10001702-10001721 None:intergenic 40.0%
GAAGAACTGAAGACTTTACG+AGG - chr8_3:10001726-10001745 Msa1275820:CDS 40.0%
TGAAGACTTTACGAGGAGAT+GGG - chr8_3:10001733-10001752 Msa1275820:CDS 40.0%
GACAGGTAAACGTGAAGAAT+GGG - chr8_3:10001755-10001774 Msa1275820:CDS 40.0%
GTAAACGTGAAGAATGGGAA+AGG - chr8_3:10001760-10001779 Msa1275820:intron 40.0%
!!! GCTAAGCTAGCTTTTCTATC+AGG + chr8_3:10001822-10001841 None:intergenic 40.0%
CTGCACAAAGGAAAGTGATA+TGG - chr8_3:10001980-10001999 Msa1275820:CDS 40.0%
CAGATCCTAAAAGTGAGAGA+CGG - chr8_3:10002188-10002207 Msa1275820:intron 40.0%
GTAAGTGCAGATGTTAATGC+AGG + chr8_3:10002313-10002332 None:intergenic 40.0%
AAATGCACGCACATCATCAA+AGG + chr8_3:10002365-10002384 None:intergenic 40.0%
GTTCCTTGAACAACGGTATA+GGG + chr8_3:10002435-10002454 None:intergenic 40.0%
AGTTCCTTGAACAACGGTAT+AGG + chr8_3:10002436-10002455 None:intergenic 40.0%
!! TTAGGTGGTGGAAACTTAAG+GGG + chr8_3:10002481-10002500 None:intergenic 40.0%
!! CTTTAGGTGGTGGAAACTTA+AGG + chr8_3:10002483-10002502 None:intergenic 40.0%
AAGCTAGATAGGCAACTCTA+CGG - chr8_3:10002828-10002847 Msa1275820:CDS 40.0%
CTGTTCTTTGGTTATTGTGC+TGG + chr8_3:10002862-10002881 None:intergenic 40.0%
AGCTTCAACAAAACATGGGT+GGG - chr8_3:10002880-10002899 Msa1275820:CDS 40.0%
!! TGATGGAACTTTGAAGCCAT+TGG - chr8_3:10003158-10003177 Msa1275820:intron 40.0%
! CAACTACATAAGCTTTAGCG+AGG + chr8_3:10003284-10003303 None:intergenic 40.0%
TATACCAATGGCTGATGAGT+TGG + chr8_3:10003326-10003345 None:intergenic 40.0%
TTCATTGTGTCACGATAGTG+CGG + chr8_3:10003516-10003535 None:intergenic 40.0%
AGTGTCTTGGTAAATGCAGA+GGG - chr8_3:10003555-10003574 Msa1275820:intron 40.0%
TTCGCAACCTCAATCTAAGA+TGG - chr8_3:10003754-10003773 Msa1275820:CDS 40.0%
! TCGCAACCTCAATCTAAGAT+GGG - chr8_3:10003755-10003774 Msa1275820:CDS 40.0%
CTAATCCATCTGCAGCATAA+GGG + chr8_3:10003985-10004004 None:intergenic 40.0%
TCTAATCCATCTGCAGCATA+AGG + chr8_3:10003986-10004005 None:intergenic 40.0%
!! CTGCAGATGGATTAGAGATA+TGG - chr8_3:10003990-10004009 Msa1275820:intron 40.0%
TGGAAAGAACTTGTAGAGGT+TGG - chr8_3:10004103-10004122 Msa1275820:intron 40.0%
TGCTGAAGCAATCCATATGA+GGG + chr8_3:10004203-10004222 None:intergenic 40.0%
TAGAAAGCTCATCATACTCG+GGG + chr8_3:10004321-10004340 None:intergenic 40.0%
GCTTCTGATGAACAATACCT+CGG - chr8_3:10004430-10004449 Msa1275820:five_prime_UTR 40.0%
! GAGACTCTAAGGAATCGATA+TGG - chr8_3:10004568-10004587 Msa1275820:five_prime_UTR 40.0%
TCTAAGGAATCGATATGGAC+CGG - chr8_3:10004573-10004592 Msa1275820:five_prime_UTR 40.0%
CTTTATCCTTCAAGTGAGGA+AGG - chr8_3:10004616-10004635 Msa1275820:five_prime_UTR 40.0%
ATGTTTCGGTTCAACGGAAG+AGG + chr8_3:10000519-10000538 None:intergenic 45.0%
GGAGCCCTAAAGTAAGAGTT+TGG + chr8_3:10000554-10000573 None:intergenic 45.0%
CCCCCCTTTAGTTACATTGA+TGG - chr8_3:10000608-10000627 Msa1275820:CDS 45.0%
AATAGCAACTTGCAAGCCAC+TGG - chr8_3:10000719-10000738 Msa1275820:CDS 45.0%
ATAGCAACTTGCAAGCCACT+GGG - chr8_3:10000720-10000739 Msa1275820:CDS 45.0%
TCACAGAAGCCAAAAGGTGA+AGG - chr8_3:10000816-10000835 Msa1275820:CDS 45.0%
CACAGAAGCCAAAAGGTGAA+GGG - chr8_3:10000817-10000836 Msa1275820:CDS 45.0%
ACAGAAGCCAAAAGGTGAAG+GGG - chr8_3:10000818-10000837 Msa1275820:CDS 45.0%
! ACAGGTGGATTCAAGGTTCT+TGG - chr8_3:10000904-10000923 Msa1275820:CDS 45.0%
TGACACCTACGGTTCAATCT+TGG - chr8_3:10000948-10000967 Msa1275820:CDS 45.0%
GACACCTACGGTTCAATCTT+GGG - chr8_3:10000949-10000968 Msa1275820:CDS 45.0%
! ATTAGTGCTACTAGCGCTGA+TGG - chr8_3:10000994-10001013 Msa1275820:CDS 45.0%
GATAGTGACATGGGAATTCC+AGG - chr8_3:10001410-10001429 Msa1275820:intron 45.0%
AATGGAGCTGGTGTTTCACT+TGG + chr8_3:10001690-10001709 None:intergenic 45.0%
CTGAAGACTTTACGAGGAGA+TGG - chr8_3:10001732-10001751 Msa1275820:CDS 45.0%
GGACAGGTAAACGTGAAGAA+TGG - chr8_3:10001754-10001773 Msa1275820:CDS 45.0%
GTGTTGGATCCTCCAATAAC+GGG + chr8_3:10001849-10001868 None:intergenic 45.0%
! GGTGTTGGATCCTCCAATAA+CGG + chr8_3:10001850-10001869 None:intergenic 45.0%
! TTTCTTAGCTGGTTTCCTGC+CGG + chr8_3:10001898-10001917 None:intergenic 45.0%
! TGATGTGCGTGCATTTTACG+AGG - chr8_3:10002369-10002388 Msa1275820:CDS 45.0%
! GATGTGCGTGCATTTTACGA+GGG - chr8_3:10002370-10002389 Msa1275820:CDS 45.0%
TAGCCCTATACCGTTGTTCA+AGG - chr8_3:10002429-10002448 Msa1275820:intron 45.0%
CTGAGGAGTTCCTTGAACAA+CGG + chr8_3:10002442-10002461 None:intergenic 45.0%
AAGGAACTCCTCAGAACTGA+TGG - chr8_3:10002448-10002467 Msa1275820:intron 45.0%
CCTTGAATGACTTTAGGTGG+TGG + chr8_3:10002493-10002512 None:intergenic 45.0%
CCACCACCTAAAGTCATTCA+AGG - chr8_3:10002490-10002509 Msa1275820:intron 45.0%
!! CTATCTAGCTTGCTCTTTGG+TGG + chr8_3:10002819-10002838 None:intergenic 45.0%
CACCAAAGAGCAAGCTAGAT+AGG - chr8_3:10002817-10002836 Msa1275820:CDS 45.0%
!! TGCCTATCTAGCTTGCTCTT+TGG + chr8_3:10002822-10002841 None:intergenic 45.0%
CAGCTTCAACAAAACATGGG+TGG - chr8_3:10002879-10002898 Msa1275820:CDS 45.0%
!! AATGGCTGATGAGTTGGTGA+TGG + chr8_3:10003320-10003339 None:intergenic 45.0%
ATCACCAACTCATCAGCCAT+TGG - chr8_3:10003319-10003338 Msa1275820:CDS 45.0%
GAGTGTCTTGGTAAATGCAG+AGG - chr8_3:10003554-10003573 Msa1275820:intron 45.0%
! GATTGGGTTTTCACTGAGCA+AGG - chr8_3:10003642-10003661 Msa1275820:CDS 45.0%
! ATCTAGAGGTGTGGCTCTTA+AGG - chr8_3:10003916-10003935 Msa1275820:intron 45.0%
AAGGGTAGTCCTCTATCAGA+AGG + chr8_3:10003967-10003986 None:intergenic 45.0%
! GAACTTGTAGAGGTTGGTCA+CGG - chr8_3:10004109-10004128 Msa1275820:intron 45.0%
TGAAGCAATCCATATGAGGG+TGG + chr8_3:10004200-10004219 None:intergenic 45.0%
GTGCTGAAGCAATCCATATG+AGG + chr8_3:10004204-10004223 None:intergenic 45.0%
TTTGGACAATATCCGTACGG+AGG - chr8_3:10004241-10004260 Msa1275820:CDS 45.0%
AGAAAGCTCATCATACTCGG+GGG + chr8_3:10004320-10004339 None:intergenic 45.0%
TACCTCGGACAGAGAATTGA+AGG - chr8_3:10004445-10004464 Msa1275820:five_prime_UTR 45.0%
GTCAATCCTTCCTCACTTGA+AGG + chr8_3:10004625-10004644 None:intergenic 45.0%
ATGTTTCGGTTCAACGGAAG+AGG + chr8_3:10000519-10000538 None:intergenic 45.0%
GGAGCCCTAAAGTAAGAGTT+TGG + chr8_3:10000554-10000573 None:intergenic 45.0%
CCCCCCTTTAGTTACATTGA+TGG - chr8_3:10000608-10000627 Msa1275820:CDS 45.0%
AATAGCAACTTGCAAGCCAC+TGG - chr8_3:10000719-10000738 Msa1275820:CDS 45.0%
ATAGCAACTTGCAAGCCACT+GGG - chr8_3:10000720-10000739 Msa1275820:CDS 45.0%
TCACAGAAGCCAAAAGGTGA+AGG - chr8_3:10000816-10000835 Msa1275820:CDS 45.0%
CACAGAAGCCAAAAGGTGAA+GGG - chr8_3:10000817-10000836 Msa1275820:CDS 45.0%
ACAGAAGCCAAAAGGTGAAG+GGG - chr8_3:10000818-10000837 Msa1275820:CDS 45.0%
! ACAGGTGGATTCAAGGTTCT+TGG - chr8_3:10000904-10000923 Msa1275820:CDS 45.0%
TGACACCTACGGTTCAATCT+TGG - chr8_3:10000948-10000967 Msa1275820:CDS 45.0%
GACACCTACGGTTCAATCTT+GGG - chr8_3:10000949-10000968 Msa1275820:CDS 45.0%
! ATTAGTGCTACTAGCGCTGA+TGG - chr8_3:10000994-10001013 Msa1275820:CDS 45.0%
GATAGTGACATGGGAATTCC+AGG - chr8_3:10001410-10001429 Msa1275820:intron 45.0%
AATGGAGCTGGTGTTTCACT+TGG + chr8_3:10001690-10001709 None:intergenic 45.0%
CTGAAGACTTTACGAGGAGA+TGG - chr8_3:10001732-10001751 Msa1275820:CDS 45.0%
GGACAGGTAAACGTGAAGAA+TGG - chr8_3:10001754-10001773 Msa1275820:CDS 45.0%
GTGTTGGATCCTCCAATAAC+GGG + chr8_3:10001849-10001868 None:intergenic 45.0%
! GGTGTTGGATCCTCCAATAA+CGG + chr8_3:10001850-10001869 None:intergenic 45.0%
! TTTCTTAGCTGGTTTCCTGC+CGG + chr8_3:10001898-10001917 None:intergenic 45.0%
! TGATGTGCGTGCATTTTACG+AGG - chr8_3:10002369-10002388 Msa1275820:CDS 45.0%
! GATGTGCGTGCATTTTACGA+GGG - chr8_3:10002370-10002389 Msa1275820:CDS 45.0%
TAGCCCTATACCGTTGTTCA+AGG - chr8_3:10002429-10002448 Msa1275820:intron 45.0%
CTGAGGAGTTCCTTGAACAA+CGG + chr8_3:10002442-10002461 None:intergenic 45.0%
AAGGAACTCCTCAGAACTGA+TGG - chr8_3:10002448-10002467 Msa1275820:intron 45.0%
CCTTGAATGACTTTAGGTGG+TGG + chr8_3:10002493-10002512 None:intergenic 45.0%
CCACCACCTAAAGTCATTCA+AGG - chr8_3:10002490-10002509 Msa1275820:intron 45.0%
!! CTATCTAGCTTGCTCTTTGG+TGG + chr8_3:10002819-10002838 None:intergenic 45.0%
CACCAAAGAGCAAGCTAGAT+AGG - chr8_3:10002817-10002836 Msa1275820:CDS 45.0%
!! TGCCTATCTAGCTTGCTCTT+TGG + chr8_3:10002822-10002841 None:intergenic 45.0%
CAGCTTCAACAAAACATGGG+TGG - chr8_3:10002879-10002898 Msa1275820:CDS 45.0%
!! AATGGCTGATGAGTTGGTGA+TGG + chr8_3:10003320-10003339 None:intergenic 45.0%
ATCACCAACTCATCAGCCAT+TGG - chr8_3:10003319-10003338 Msa1275820:CDS 45.0%
GAGTGTCTTGGTAAATGCAG+AGG - chr8_3:10003554-10003573 Msa1275820:intron 45.0%
! GATTGGGTTTTCACTGAGCA+AGG - chr8_3:10003642-10003661 Msa1275820:CDS 45.0%
! ATCTAGAGGTGTGGCTCTTA+AGG - chr8_3:10003916-10003935 Msa1275820:intron 45.0%
AAGGGTAGTCCTCTATCAGA+AGG + chr8_3:10003967-10003986 None:intergenic 45.0%
! GAACTTGTAGAGGTTGGTCA+CGG - chr8_3:10004109-10004128 Msa1275820:intron 45.0%
TGAAGCAATCCATATGAGGG+TGG + chr8_3:10004200-10004219 None:intergenic 45.0%
GTGCTGAAGCAATCCATATG+AGG + chr8_3:10004204-10004223 None:intergenic 45.0%
TTTGGACAATATCCGTACGG+AGG - chr8_3:10004241-10004260 Msa1275820:CDS 45.0%
AGAAAGCTCATCATACTCGG+GGG + chr8_3:10004320-10004339 None:intergenic 45.0%
TACCTCGGACAGAGAATTGA+AGG - chr8_3:10004445-10004464 Msa1275820:five_prime_UTR 45.0%
GTCAATCCTTCCTCACTTGA+AGG + chr8_3:10004625-10004644 None:intergenic 45.0%
!! TTAAAAAAATGTAAAAATAT+TGG + chr8_3:10000575-10000594 None:intergenic 5.0%
!! TTAAAAAAATGTAAAAATAT+TGG + chr8_3:10000575-10000594 None:intergenic 5.0%
AAAAAACCCGTGCATCGCAC+AGG - chr8_3:10000445-10000464 Msa1275820:three_prime_UTR 50.0%
ACTCTAACCTGTGCGATGCA+CGG + chr8_3:10000455-10000474 None:intergenic 50.0%
CAATGTAACTAAAGGGGGGG+TGG + chr8_3:10000607-10000626 None:intergenic 50.0%
ACCTTAGGCTGTTGACGTCT+TGG - chr8_3:10000634-10000653 Msa1275820:CDS 50.0%
TCCAAGACGTCAACAGCCTA+AGG + chr8_3:10000638-10000657 None:intergenic 50.0%
! TCACTGTCCCCTTCACCTTT+TGG + chr8_3:10000828-10000847 None:intergenic 50.0%
TTCAATCTTGGGCCGTTCAG+TGG - chr8_3:10000960-10000979 Msa1275820:CDS 50.0%
TCAACCTGAGAGCCACTGAA+CGG + chr8_3:10000975-10000994 None:intergenic 50.0%
CACTGTCCAGCTCCTAGAAT+CGG + chr8_3:10001365-10001384 None:intergenic 50.0%
ACTTTACGAGGAGATGGGAC+AGG - chr8_3:10001738-10001757 Msa1275820:CDS 50.0%
AGCTTAGCTCGTCCCGTTAT+TGG - chr8_3:10001834-10001853 Msa1275820:intron 50.0%
TTAGCTCGTCCCGTTATTGG+AGG - chr8_3:10001837-10001856 Msa1275820:intron 50.0%
GGCAGGAAACCAGCTAAGAA+AGG - chr8_3:10001897-10001916 Msa1275820:CDS 50.0%
!! TCGCTCCGTCTCTCACTTTT+AGG + chr8_3:10002196-10002215 None:intergenic 50.0%
GTGCTTCACCATCAGTTCTG+AGG + chr8_3:10002459-10002478 None:intergenic 50.0%
CTGCTTAGCTCAATGGCCAA+TGG + chr8_3:10003177-10003196 None:intergenic 50.0%
! ATGTGGGCTGCTTAGCTCAA+TGG + chr8_3:10003184-10003203 None:intergenic 50.0%
AGCTATCAGCCTGAGGATGT+GGG + chr8_3:10003200-10003219 None:intergenic 50.0%
AAGCTATCAGCCTGAGGATG+TGG + chr8_3:10003201-10003220 None:intergenic 50.0%
CATCCTCAGGCTGATAGCTT+TGG - chr8_3:10003201-10003220 Msa1275820:intron 50.0%
GCTTCAACACCATCACTTGC+AGG + chr8_3:10003249-10003268 None:intergenic 50.0%
!! TGCACTTGCAAGGAGTGTCT+TGG - chr8_3:10003542-10003561 Msa1275820:intron 50.0%
AAGGATCCTACTTCCCCACA+CGG - chr8_3:10003935-10003954 Msa1275820:intron 50.0%
AGTCCTCTATCAGAAGGCGA+AGG + chr8_3:10003961-10003980 None:intergenic 50.0%
GACTACCCTTATGCTGCAGA+TGG - chr8_3:10003977-10003996 Msa1275820:intron 50.0%
ACACTTGCACCACCCTCATA+TGG - chr8_3:10004188-10004207 Msa1275820:CDS 50.0%
TACTCGGGGGATCCTTTCTT+AGG + chr8_3:10004307-10004326 None:intergenic 50.0%
CACCTTCAATTCTCTGTCCG+AGG + chr8_3:10004450-10004469 None:intergenic 50.0%
!! GAGGAAGGATTGACTTGCAG+AGG - chr8_3:10004631-10004650 Msa1275820:five_prime_UTR 50.0%
ATTCCCTCAACCCCTATCCA+TGG - chr8_3:10004729-10004748 Msa1275820:five_prime_UTR 50.0%
TGACCATGGATAGGGGTTGA+GGG + chr8_3:10004735-10004754 None:intergenic 50.0%
ATGACCATGGATAGGGGTTG+AGG + chr8_3:10004736-10004755 None:intergenic 50.0%
AAAAAACCCGTGCATCGCAC+AGG - chr8_3:10000445-10000464 Msa1275820:three_prime_UTR 50.0%
ACTCTAACCTGTGCGATGCA+CGG + chr8_3:10000455-10000474 None:intergenic 50.0%
CAATGTAACTAAAGGGGGGG+TGG + chr8_3:10000607-10000626 None:intergenic 50.0%
ACCTTAGGCTGTTGACGTCT+TGG - chr8_3:10000634-10000653 Msa1275820:CDS 50.0%
TCCAAGACGTCAACAGCCTA+AGG + chr8_3:10000638-10000657 None:intergenic 50.0%
! TCACTGTCCCCTTCACCTTT+TGG + chr8_3:10000828-10000847 None:intergenic 50.0%
TTCAATCTTGGGCCGTTCAG+TGG - chr8_3:10000960-10000979 Msa1275820:CDS 50.0%
TCAACCTGAGAGCCACTGAA+CGG + chr8_3:10000975-10000994 None:intergenic 50.0%
CACTGTCCAGCTCCTAGAAT+CGG + chr8_3:10001365-10001384 None:intergenic 50.0%
ACTTTACGAGGAGATGGGAC+AGG - chr8_3:10001738-10001757 Msa1275820:CDS 50.0%
AGCTTAGCTCGTCCCGTTAT+TGG - chr8_3:10001834-10001853 Msa1275820:intron 50.0%
TTAGCTCGTCCCGTTATTGG+AGG - chr8_3:10001837-10001856 Msa1275820:intron 50.0%
GGCAGGAAACCAGCTAAGAA+AGG - chr8_3:10001897-10001916 Msa1275820:CDS 50.0%
!! TCGCTCCGTCTCTCACTTTT+AGG + chr8_3:10002196-10002215 None:intergenic 50.0%
GTGCTTCACCATCAGTTCTG+AGG + chr8_3:10002459-10002478 None:intergenic 50.0%
CTGCTTAGCTCAATGGCCAA+TGG + chr8_3:10003177-10003196 None:intergenic 50.0%
! ATGTGGGCTGCTTAGCTCAA+TGG + chr8_3:10003184-10003203 None:intergenic 50.0%
AGCTATCAGCCTGAGGATGT+GGG + chr8_3:10003200-10003219 None:intergenic 50.0%
AAGCTATCAGCCTGAGGATG+TGG + chr8_3:10003201-10003220 None:intergenic 50.0%
CATCCTCAGGCTGATAGCTT+TGG - chr8_3:10003201-10003220 Msa1275820:intron 50.0%
GCTTCAACACCATCACTTGC+AGG + chr8_3:10003249-10003268 None:intergenic 50.0%
!! TGCACTTGCAAGGAGTGTCT+TGG - chr8_3:10003542-10003561 Msa1275820:intron 50.0%
AAGGATCCTACTTCCCCACA+CGG - chr8_3:10003935-10003954 Msa1275820:intron 50.0%
AGTCCTCTATCAGAAGGCGA+AGG + chr8_3:10003961-10003980 None:intergenic 50.0%
GACTACCCTTATGCTGCAGA+TGG - chr8_3:10003977-10003996 Msa1275820:intron 50.0%
ACACTTGCACCACCCTCATA+TGG - chr8_3:10004188-10004207 Msa1275820:CDS 50.0%
TACTCGGGGGATCCTTTCTT+AGG + chr8_3:10004307-10004326 None:intergenic 50.0%
CACCTTCAATTCTCTGTCCG+AGG + chr8_3:10004450-10004469 None:intergenic 50.0%
!! GAGGAAGGATTGACTTGCAG+AGG - chr8_3:10004631-10004650 Msa1275820:five_prime_UTR 50.0%
ATTCCCTCAACCCCTATCCA+TGG - chr8_3:10004729-10004748 Msa1275820:five_prime_UTR 50.0%
TGACCATGGATAGGGGTTGA+GGG + chr8_3:10004735-10004754 None:intergenic 50.0%
ATGACCATGGATAGGGGTTG+AGG + chr8_3:10004736-10004755 None:intergenic 50.0%
CTCTAACCTGTGCGATGCAC+GGG + chr8_3:10000454-10000473 None:intergenic 55.0%
GATATCAACGTCCTCACCGC+TGG - chr8_3:10000871-10000890 Msa1275820:CDS 55.0%
ACGGCCCAAGATTGAACCGT+AGG + chr8_3:10000956-10000975 None:intergenic 55.0%
!! GTTACCTCCGCACCGATTCT+AGG - chr8_3:10001350-10001369 Msa1275820:intron 55.0%
TCCAGCTCCTAGAATCGGTG+CGG + chr8_3:10001360-10001379 None:intergenic 55.0%
! GTGCGTGCATTTTACGAGGG+TGG - chr8_3:10002373-10002392 Msa1275820:CDS 55.0%
GGACCAAAGCTATCAGCCTG+AGG + chr8_3:10003207-10003226 None:intergenic 55.0%
CTCTAACCTGTGCGATGCAC+GGG + chr8_3:10000454-10000473 None:intergenic 55.0%
GATATCAACGTCCTCACCGC+TGG - chr8_3:10000871-10000890 Msa1275820:CDS 55.0%
ACGGCCCAAGATTGAACCGT+AGG + chr8_3:10000956-10000975 None:intergenic 55.0%
!! GTTACCTCCGCACCGATTCT+AGG - chr8_3:10001350-10001369 Msa1275820:intron 55.0%
TCCAGCTCCTAGAATCGGTG+CGG + chr8_3:10001360-10001379 None:intergenic 55.0%
! GTGCGTGCATTTTACGAGGG+TGG - chr8_3:10002373-10002392 Msa1275820:CDS 55.0%
GGACCAAAGCTATCAGCCTG+AGG + chr8_3:10003207-10003226 None:intergenic 55.0%
AGCTCCTAGAATCGGTGCGG+AGG + chr8_3:10001357-10001376 None:intergenic 60.0%
!! TCCGCACCGATTCTAGGAGC+TGG - chr8_3:10001356-10001375 Msa1275820:intron 60.0%
! TCGAGGGTACGGCAAGGTGT+TGG + chr8_3:10001865-10001884 None:intergenic 60.0%
ACACCTTGCCGTACCCTCGA+AGG - chr8_3:10001865-10001884 Msa1275820:CDS 60.0%
CACCTTGCCGTACCCTCGAA+GGG - chr8_3:10001866-10001885 Msa1275820:CDS 60.0%
ACCTTGCCGTACCCTCGAAG+GGG - chr8_3:10001867-10001886 Msa1275820:CDS 60.0%
GATCTCCCCCTTCGAGGGTA+CGG + chr8_3:10001876-10001895 None:intergenic 60.0%
TACCCTCGAAGGGGGAGATC+CGG - chr8_3:10001876-10001895 Msa1275820:CDS 60.0%
GCTAAGCAGCCCACATCCTC+AGG - chr8_3:10003188-10003207 Msa1275820:intron 60.0%
TCAGAAGGCGAAGGCCGTGT+GGG + chr8_3:10003952-10003971 None:intergenic 60.0%
ATCAGAAGGCGAAGGCCGTG+TGG + chr8_3:10003953-10003972 None:intergenic 60.0%
CGGCCTTCGCCTTCTGATAG+AGG - chr8_3:10003955-10003974 Msa1275820:intron 60.0%
AGCTCCTAGAATCGGTGCGG+AGG + chr8_3:10001357-10001376 None:intergenic 60.0%
!! TCCGCACCGATTCTAGGAGC+TGG - chr8_3:10001356-10001375 Msa1275820:intron 60.0%
! TCGAGGGTACGGCAAGGTGT+TGG + chr8_3:10001865-10001884 None:intergenic 60.0%
ACACCTTGCCGTACCCTCGA+AGG - chr8_3:10001865-10001884 Msa1275820:CDS 60.0%
CACCTTGCCGTACCCTCGAA+GGG - chr8_3:10001866-10001885 Msa1275820:CDS 60.0%
ACCTTGCCGTACCCTCGAAG+GGG - chr8_3:10001867-10001886 Msa1275820:CDS 60.0%
GATCTCCCCCTTCGAGGGTA+CGG + chr8_3:10001876-10001895 None:intergenic 60.0%
TACCCTCGAAGGGGGAGATC+CGG - chr8_3:10001876-10001895 Msa1275820:CDS 60.0%
GCTAAGCAGCCCACATCCTC+AGG - chr8_3:10003188-10003207 Msa1275820:intron 60.0%
TCAGAAGGCGAAGGCCGTGT+GGG + chr8_3:10003952-10003971 None:intergenic 60.0%
ATCAGAAGGCGAAGGCCGTG+TGG + chr8_3:10003953-10003972 None:intergenic 60.0%
CGGCCTTCGCCTTCTGATAG+AGG - chr8_3:10003955-10003974 Msa1275820:intron 60.0%
TGGGCCGTTCAGTGGCTCTC+AGG - chr8_3:10000968-10000987 Msa1275820:CDS 65.0%
CCTTGCCGTACCCTCGAAGG+GGG - chr8_3:10001868-10001887 Msa1275820:CDS 65.0%
TGCCGGATCTCCCCCTTCGA+GGG + chr8_3:10001881-10001900 None:intergenic 65.0%
CGAAGGCCGTGTGGGGAAGT+AGG + chr8_3:10003944-10003963 None:intergenic 65.0%
CAGAAGGCGAAGGCCGTGTG+GGG + chr8_3:10003951-10003970 None:intergenic 65.0%
TGGGCCGTTCAGTGGCTCTC+AGG - chr8_3:10000968-10000987 Msa1275820:CDS 65.0%
CCTTGCCGTACCCTCGAAGG+GGG - chr8_3:10001868-10001887 Msa1275820:CDS 65.0%
TGCCGGATCTCCCCCTTCGA+GGG + chr8_3:10001881-10001900 None:intergenic 65.0%
CGAAGGCCGTGTGGGGAAGT+AGG + chr8_3:10003944-10003963 None:intergenic 65.0%
CAGAAGGCGAAGGCCGTGTG+GGG + chr8_3:10003951-10003970 None:intergenic 65.0%
! CCCCCTTCGAGGGTACGGCA+AGG + chr8_3:10001871-10001890 None:intergenic 70.0%
CTGCCGGATCTCCCCCTTCG+AGG + chr8_3:10001882-10001901 None:intergenic 70.0%
CTCGAAGGGGGAGATCCGGC+AGG - chr8_3:10001880-10001899 Msa1275820:CDS 70.0%
! CCCCCTTCGAGGGTACGGCA+AGG + chr8_3:10001871-10001890 None:intergenic 70.0%
CTGCCGGATCTCCCCCTTCG+AGG + chr8_3:10001882-10001901 None:intergenic 70.0%
CTCGAAGGGGGAGATCCGGC+AGG - chr8_3:10001880-10001899 Msa1275820:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 10000317 10004885 10000317 ID=Msa1275820;Name=Msa1275820
chr8_3 mRNA 10000317 10004885 10000317 ID=Msa1275820-mRNA-1;Parent=Msa1275820;Name=Msa1275820-mRNA-1;_AED=0.06;_eAED=0.06;_QI=488|1|1|1|1|1|9|207|860
chr8_3 exon 10000317 10001280 10000317 ID=Msa1275820-mRNA-1:exon:4167;Parent=Msa1275820-mRNA-1
chr8_3 exon 10001514 10001777 10001514 ID=Msa1275820-mRNA-1:exon:4166;Parent=Msa1275820-mRNA-1
chr8_3 exon 10001862 10002169 10001862 ID=Msa1275820-mRNA-1:exon:4165;Parent=Msa1275820-mRNA-1
chr8_3 exon 10002285 10002392 10002285 ID=Msa1275820-mRNA-1:exon:4164;Parent=Msa1275820-mRNA-1
chr8_3 exon 10002517 10002602 10002517 ID=Msa1275820-mRNA-1:exon:4163;Parent=Msa1275820-mRNA-1
chr8_3 exon 10002691 10003011 10002691 ID=Msa1275820-mRNA-1:exon:4162;Parent=Msa1275820-mRNA-1
chr8_3 exon 10003284 10003524 10003284 ID=Msa1275820-mRNA-1:exon:4161;Parent=Msa1275820-mRNA-1
chr8_3 exon 10003613 10003899 10003613 ID=Msa1275820-mRNA-1:exon:4160;Parent=Msa1275820-mRNA-1
chr8_3 exon 10004187 10004885 10004187 ID=Msa1275820-mRNA-1:exon:4159;Parent=Msa1275820-mRNA-1
chr8_3 five_prime_UTR 10004398 10004885 10004398 ID=Msa1275820-mRNA-1:five_prime_utr;Parent=Msa1275820-mRNA-1
chr8_3 CDS 10004187 10004397 10004187 ID=Msa1275820-mRNA-1:cds;Parent=Msa1275820-mRNA-1
chr8_3 CDS 10003613 10003899 10003613 ID=Msa1275820-mRNA-1:cds;Parent=Msa1275820-mRNA-1
chr8_3 CDS 10003284 10003524 10003284 ID=Msa1275820-mRNA-1:cds;Parent=Msa1275820-mRNA-1
chr8_3 CDS 10002691 10003011 10002691 ID=Msa1275820-mRNA-1:cds;Parent=Msa1275820-mRNA-1
chr8_3 CDS 10002517 10002602 10002517 ID=Msa1275820-mRNA-1:cds;Parent=Msa1275820-mRNA-1
chr8_3 CDS 10002285 10002392 10002285 ID=Msa1275820-mRNA-1:cds;Parent=Msa1275820-mRNA-1
chr8_3 CDS 10001862 10002169 10001862 ID=Msa1275820-mRNA-1:cds;Parent=Msa1275820-mRNA-1
chr8_3 CDS 10001514 10001777 10001514 ID=Msa1275820-mRNA-1:cds;Parent=Msa1275820-mRNA-1
chr8_3 CDS 10000524 10001280 10000524 ID=Msa1275820-mRNA-1:cds;Parent=Msa1275820-mRNA-1
chr8_3 three_prime_UTR 10000317 10000523 10000317 ID=Msa1275820-mRNA-1:three_prime_utr;Parent=Msa1275820-mRNA-1
Gene Sequence

>Msa1275820

ATGTTTTCATTTCACAGAAGCCAAAAGGTGAAGGGGACAGTGATATTGATGCATAGGAATGTGTTGGATATCAACGTCCTCACCGCTGGTTTAAATATCACAGGTGGATTCAAGGTTCTTGGTAATCTCACTAGCTCTATATTTGACACCTACGGTTCAATCTTGGGCCGTTCAGTGGCTCTCAGGTTGATTAGTGCTACTAGCGCTGATGAAAGTGGAAAAGGTAAAGTGGGAAAGAGATCGTTTCTTGAAGGTTTTGTTACCTCCGCACCGATTCTAGGAGCTGGACAGTGTGCATACAAAGTTCATTTTCAATGGGATAGTGACATGGGAATTCCAGGAGCATTTTATATTGAGAATTTCATGCTAGGAGAATTTTTTCTTGTAAGTTTAACACTTGAAGATATTCCTAACCATGGAACCATCAACTTTGTTTGCAACTCATGGATTTACAATTGTCGAAAGTACAAAACTGAACGCATTTTCTTTGCCAACAAGACATATCTTCCAAGTGAAACACCAGCTCCATTAGTCTACTATAGACAAGAAGAACTGAAGACTTTACGAGGAGATGGGACAGGTAAACGTGAAGAATGGGAAAGGATCTATGACTATGATGTCTACAATGATGTGGGTGATCCTGATAGAAAAGCTAGCTTAGCTCGTCCCGTTATTGGAGGATCCAACACCTTGCCGTACCCTCGAAGGGGGAGATCCGGCAGGAAACCAGCTAAGAAAGATCCTAAAAGTGAGAGACGGAGCGAGTATATTTATCTTCCAAGAGATGAATCATTTGGTCACTTGAAGTCTTCAGACTTTCTTGTTTACATACTTAAATCAGTATCTCAGAATGTCATACCTGCATTAACATCTGCACTTACATTACAATTCAACAAGCCAGAGTTTAACACCTTTGATGATGTGCGTGCATTTTACGAGGGTGGAATTAAATTGCCTACTAATGAACTTAGCAAACTTAGCCCTATACCGTTGTTCAAGGAACTCCTCAGAACTGATGGTGAAGCACCCCTTAAGTTTCCACCACCTAAAGTCATTCAAGTGAATCAATCTGGATGGATGACTGATGAAGAATTTACAAGAGAGATGATTGCTGGTGTGAATCCACACATCATCAAAAGAATTCAGGAATTTCCACCAAAGAGCAAGCTAGATAGGCAACTCTACGGCGATAATACCAGCACAATAACCAAAGAACAGCTTCAACAAAACATGGGTGGGATCACAGTTGAACAAGCTATCGAAACCAACAAATTGTACATACTTGATCACCATGACTCAATATATCCATATCTGAGGAAAATAAATGCAGCTGATACAACAAAGGCATATGCTACGAGAACCTTCCTTTTCTTACAAAATGATGGAACTTTGAAGCCATTGGCCATTGAGCTAAGCAGCCCACATCCTCAGGCTGATAGCTTTGGTCCTGTTAGTGATATTTACTTTCCTGCAAGTGATGGTGTTGAAGCTTCAATTTGGCTCCTCGCTAAAGCTTATGTAGTTGTAAACGACTCGTGCCATCACCAACTCATCAGCCATTGGTTGAACACTCATGCTGTTGTTGAGCCATTCATCATAGCAACAAATAGGCATCTTAGTGTGGTTCATCCTATTCATAAGCTTTTACTTCCGCACTATCGTGACACAATGAACATTAATGCACTTGCAAGGAGTGTCTTGGTAAATGCAGAGGGTGTTATTGAGAAGACGTTCTTGATGGGAAGTTATTCTCTAGAATTGTCTGCTGTATTATATAAGGATTGGGTTTTCACTGAGCAAGGTTTGCCTAATGATCTACTCAAAAGAGGTGTGGCTCTTAAGGATCCTACTTCCCCACACGGCCTTCGCCTTCTGATAGAGGACTACCCTTATGCTGCAGATGGATTAGAGATATGGGCTGTTATTAAGTCATGGGTTGAAGAATATGTGAATTTCTACTACAAGTCAGATGTAAATATTGCACAAGATTCTGAACTCCAAGCATTTTGGAAAGAACTTGTAGAGGTTGGTCACGGTGACTTGAAAAATGCAACATGGTGGGTTAAGATGCAAACTCGTACAGAGTTGATTGACACTTGCACCACCCTCATATGGATTGCTTCAGCACTTCATGCAGCTGTTAATTTTGGACAATATCCGTACGGAGGTTACATTCTTAACCGACCAACTAAAAGCAGAAGATTAATGCCTAAGAAAGGATCCCCCGAGTATGATGAGCTTTCTAAGAACTATCAAAAGGCGTTTTTGAGAACAATCACACCAAAAAATGACACCCTAATTGACTTGACCATTATAGAGGTCTTGTCAAGACATGCTTCTGATGAACAATACCTCGGACAGAGAATTGAAGGTGATCTTTGGACTTCTGATTCACAACCATTAGAGGCTTTCAAGAGATTTGGAACAAAGTTGGCTGAAATTGAACAAAAACTCACTCAAAGGAATAATGATGAGACTCTAAGGAATCGATATGGACCGGTTAAGATGCCGTATACTTTGCTTTATCCTTCAAGTGAGGAAGGATTGACTTGCAGAGGCATTCCTAATAGTATCTCCATCTAA
Protein sequence

>Msa1275820

MFSFHRSQKVKGTVILMHRNVLDINVLTAGLNITGGFKVLGNLTSSIFDTYGSILGRSVALRLISATSADESGKGKVGKRSFLEGFVTSAPILGAGQCAYKVHFQWDSDMGIPGAFYIENFMLGEFFLVSLTLEDIPNHGTINFVCNSWIYNCRKYKTERIFFANKTYLPSETPAPLVYYRQEELKTLRGDGTGKREEWERIYDYDVYNDVGDPDRKASLARPVIGGSNTLPYPRRGRSGRKPAKKDPKSERRSEYIYLPRDESFGHLKSSDFLVYILKSVSQNVIPALTSALTLQFNKPEFNTFDDVRAFYEGGIKLPTNELSKLSPIPLFKELLRTDGEAPLKFPPPKVIQVNQSGWMTDEEFTREMIAGVNPHIIKRIQEFPPKSKLDRQLYGDNTSTITKEQLQQNMGGITVEQAIETNKLYILDHHDSIYPYLRKINAADTTKAYATRTFLFLQNDGTLKPLAIELSSPHPQADSFGPVSDIYFPASDGVEASIWLLAKAYVVVNDSCHHQLISHWLNTHAVVEPFIIATNRHLSVVHPIHKLLLPHYRDTMNINALARSVLVNAEGVIEKTFLMGSYSLELSAVLYKDWVFTEQGLPNDLLKRGVALKDPTSPHGLRLLIEDYPYAADGLEIWAVIKSWVEEYVNFYYKSDVNIAQDSELQAFWKELVEVGHGDLKNATWWVKMQTRTELIDTCTTLIWIASALHAAVNFGQYPYGGYILNRPTKSRRLMPKKGSPEYDELSKNYQKAFLRTITPKNDTLIDLTIIEVLSRHASDEQYLGQRIEGDLWTSDSQPLEAFKRFGTKLAEIEQKLTQRNNDETLRNRYGPVKMPYTLLYPSSEEGLTCRGIPNSISI*